View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14334_low_26 (Length: 258)

Name: NF14334_low_26
Description: NF14334
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14334_low_26
NF14334_low_26
[»] chr7 (33 HSPs)
chr7 (1-243)||(27776175-27776403)
chr7 (5-113)||(43590914-43591022)
chr7 (1-113)||(41487365-41487474)
chr7 (1-113)||(18363699-18363810)
chr7 (1-112)||(48771941-48772052)
chr7 (1-113)||(26459371-26459483)
chr7 (1-113)||(30579338-30579450)
chr7 (5-112)||(37085511-37085618)
chr7 (3-113)||(11720921-11721031)
chr7 (1-66)||(21854551-21854616)
chr7 (1-113)||(17040973-17041085)
chr7 (4-112)||(19553460-19553567)
chr7 (1-113)||(39631847-39631959)
chr7 (1-68)||(15137556-15137623)
chr7 (1-76)||(24513800-24513875)
chr7 (1-64)||(25021345-25021408)
chr7 (1-112)||(31835195-31835306)
chr7 (1-79)||(22760866-22760944)
chr7 (3-69)||(41519269-41519335)
chr7 (1-113)||(2446311-2446423)
chr7 (1-113)||(15905635-15905746)
chr7 (1-113)||(25590614-25590726)
chr7 (1-64)||(23735237-23735300)
chr7 (1-112)||(37162312-37162423)
chr7 (2-109)||(42711962-42712069)
chr7 (1-112)||(43215187-43215298)
chr7 (43-113)||(21558173-21558243)
chr7 (1-54)||(23301622-23301675)
chr7 (1-110)||(38374563-38374672)
chr7 (1-90)||(48125159-48125247)
chr7 (1-69)||(7801183-7801251)
chr7 (1-69)||(20335836-20335904)
chr7 (5-69)||(45709713-45709777)
[»] chr1 (20 HSPs)
chr1 (5-112)||(52116743-52116850)
chr1 (1-113)||(9165156-9165268)
chr1 (1-112)||(33700735-33700846)
chr1 (1-113)||(2799865-2799977)
chr1 (1-113)||(16893397-16893509)
chr1 (1-113)||(46146228-46146340)
chr1 (1-79)||(19528322-19528400)
chr1 (5-69)||(6122801-6122865)
chr1 (9-113)||(8177143-8177247)
chr1 (1-110)||(952514-952623)
chr1 (1-62)||(31794276-31794337)
chr1 (1-69)||(15786325-15786393)
chr1 (1-73)||(40257402-40257474)
chr1 (1-65)||(41508834-41508898)
chr1 (1-109)||(51814497-51814605)
chr1 (1-112)||(36371473-36371584)
chr1 (51-112)||(15065018-15065079)
chr1 (29-73)||(10150870-10150914)
chr1 (1-69)||(12259263-12259331)
chr1 (5-69)||(51703786-51703850)
[»] chr3 (24 HSPs)
chr3 (5-113)||(14339617-14339725)
chr3 (1-113)||(30311309-30311421)
chr3 (1-112)||(15048023-15048134)
chr3 (27-113)||(44743816-44743902)
chr3 (5-113)||(2667869-2667977)
chr3 (1-69)||(4222144-4222212)
chr3 (1-113)||(11642170-11642282)
chr3 (1-109)||(31520570-31520678)
chr3 (1-113)||(47454578-47454690)
chr3 (1-68)||(27093367-27093434)
chr3 (6-112)||(11612307-11612413)
chr3 (5-113)||(4844472-4844580)
chr3 (5-113)||(4870168-4870276)
chr3 (1-69)||(27923048-27923116)
chr3 (1-69)||(36720384-36720452)
chr3 (1-113)||(46518631-46518743)
chr3 (1-113)||(51903839-51903951)
chr3 (1-112)||(37788428-37788538)
chr3 (1-90)||(5499391-5499480)
chr3 (1-106)||(53412948-53413053)
chr3 (1-69)||(2597225-2597293)
chr3 (1-69)||(3054997-3055065)
chr3 (1-69)||(8051217-8051285)
chr3 (1-69)||(10499114-10499182)
[»] chr8 (21 HSPs)
chr8 (1-113)||(18540301-18540413)
chr8 (1-109)||(2203495-2203603)
chr8 (1-110)||(35641865-35641974)
chr8 (1-113)||(16852343-16852455)
chr8 (1-73)||(23361650-23361722)
chr8 (1-73)||(30483885-30483957)
chr8 (1-112)||(968365-968476)
chr8 (5-69)||(11819783-11819847)
chr8 (5-69)||(27750737-27750801)
chr8 (1-113)||(28783063-28783175)
chr8 (18-113)||(6536540-6536635)
chr8 (1-68)||(44780120-44780187)
chr8 (1-78)||(19703483-19703560)
chr8 (1-70)||(26688868-26688937)
chr8 (1-69)||(3624583-3624651)
chr8 (1-109)||(29858014-29858122)
chr8 (1-71)||(4830490-4830560)
chr8 (27-69)||(34628671-34628713)
chr8 (1-54)||(29431014-29431067)
chr8 (1-68)||(40591735-40591799)
chr8 (1-65)||(6436564-6436628)
[»] chr2 (18 HSPs)
chr2 (1-113)||(23052484-23052596)
chr2 (1-113)||(37480078-37480190)
chr2 (1-109)||(39714995-39715103)
chr2 (1-113)||(7798997-7799108)
chr2 (1-113)||(29503274-29503385)
chr2 (1-69)||(42327400-42327468)
chr2 (1-68)||(11062363-11062430)
chr2 (1-112)||(19016034-19016145)
chr2 (1-65)||(1435067-1435131)
chr2 (5-69)||(21195681-21195745)
chr2 (1-113)||(42602557-42602669)
chr2 (1-112)||(42922417-42922529)
chr2 (1-112)||(14500280-14500391)
chr2 (1-68)||(16918584-16918651)
chr2 (1-57)||(16381671-16381727)
chr2 (1-113)||(26482096-26482207)
chr2 (1-105)||(29197345-29197449)
chr2 (43-79)||(31681094-31681130)
[»] chr6 (11 HSPs)
chr6 (5-113)||(21418477-21418585)
chr6 (1-113)||(12188264-12188376)
chr6 (5-112)||(15951264-15951371)
chr6 (4-90)||(11423572-11423658)
chr6 (1-110)||(30127403-30127512)
chr6 (1-69)||(33549107-33549175)
chr6 (2-69)||(10338179-10338246)
chr6 (18-69)||(20213061-20213112)
chr6 (18-69)||(22107084-22107135)
chr6 (43-109)||(6519135-6519201)
chr6 (2-64)||(6776617-6776679)
[»] chr5 (17 HSPs)
chr5 (1-113)||(21549099-21549210)
chr5 (1-90)||(16457813-16457902)
chr5 (1-69)||(25627060-25627128)
chr5 (1-101)||(26078024-26078124)
chr5 (5-73)||(29692387-29692455)
chr5 (1-90)||(30883182-30883271)
chr5 (1-113)||(19043461-19043572)
chr5 (1-69)||(21589291-21589359)
chr5 (2-76)||(16436622-16436695)
chr5 (4-113)||(22020823-22020932)
chr5 (1-113)||(6844732-6844844)
chr5 (1-113)||(8278236-8278348)
chr5 (29-69)||(12877724-12877764)
chr5 (1-113)||(16773810-16773922)
chr5 (1-69)||(22737085-22737153)
chr5 (1-113)||(29075784-29075896)
chr5 (1-113)||(30109270-30109381)
[»] chr4 (24 HSPs)
chr4 (1-113)||(7292759-7292871)
chr4 (1-113)||(4249180-4249292)
chr4 (1-109)||(19238542-19238650)
chr4 (1-113)||(37109312-37109424)
chr4 (1-109)||(39509073-39509181)
chr4 (1-112)||(19680750-19680861)
chr4 (1-69)||(31826612-31826680)
chr4 (5-69)||(49576899-49576963)
chr4 (1-112)||(51250484-51250595)
chr4 (28-109)||(14451711-14451792)
chr4 (29-113)||(30938180-30938264)
chr4 (1-113)||(37720175-37720287)
chr4 (13-113)||(38869783-38869883)
chr4 (1-109)||(55427165-55427273)
chr4 (1-68)||(40283992-40284059)
chr4 (27-113)||(23377985-23378071)
chr4 (2-112)||(37980110-37980219)
chr4 (7-112)||(2184994-2185099)
chr4 (1-113)||(37274420-37274533)
chr4 (1-113)||(7949415-7949527)
chr4 (1-69)||(9241030-9241098)
chr4 (1-65)||(31759667-31759731)
chr4 (1-69)||(41346968-41347036)
chr4 (37-73)||(43728434-43728470)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-112)||(94935-95044)
[»] scaffold1367 (1 HSPs)
scaffold1367 (4-69)||(845-910)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-113)||(15284-15396)
[»] scaffold0122 (1 HSPs)
scaffold0122 (5-69)||(6924-6988)
[»] scaffold0299 (1 HSPs)
scaffold0299 (4-69)||(11534-11599)
[»] scaffold0070 (1 HSPs)
scaffold0070 (5-113)||(42482-42589)
[»] scaffold0194 (1 HSPs)
scaffold0194 (2-69)||(13051-13118)
[»] scaffold0172 (1 HSPs)
scaffold0172 (9-112)||(15739-15842)
[»] scaffold0291 (1 HSPs)
scaffold0291 (5-81)||(2463-2539)
[»] scaffold0118 (1 HSPs)
scaffold0118 (1-73)||(41634-41706)


Alignment Details
Target: chr7 (Bit Score: 107; Significance: 1e-53; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 27776175 - 27776403
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||||||||||||||||||||| ||| || |||||| |||||| |||||||||||||||||||||||||||||              |    
T  27776175 ccacttgggttggcctggtggtatacgcttgggacttgagagtgtgctcctcctcgaagtctcaggttcaattttccccagcgcc--------------a 27776260  T
Q  101 atttagcttcttcnnnnnnntatattaaacaaggtgagttactgtaaaattatcattaagaggcaattaaagaaaatatagatagtgaaatnnnnnnnnt 200  Q
    ||||||||| |||       ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||        |    
T  27776261 atttagctttttcaaaaaaatatattaaacaaggtgagttattgtaaaattatcattaagaggcaattaaagaaaataaagatagtgaaataaaaaaaat 27776360  T
Q  201 acttctgtgttgtgcgcctctttaaacccattcccataaacct 243  Q
    |||| |||||| || ||||||||||||||||||||||||||||    
T  27776361 acttgtgtgttatgtgcctctttaaacccattcccataaacct 27776403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 43590914 - 43591022
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaattt 104  Q
    ||||||||||||||||||||  |||||||| |||||| |||||| |||||||| ||||||||||| ||| |||| || ||||||| | | ||| ||||||    
T  43590914 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaattt 43591013  T
Q  105 agcttcttc 113  Q
    |||||||||    
T  43591014 agcttcttc 43591022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 41487365 - 41487474
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||||||||||||||  |||||||| |||||| |||   ||||||||| ||||||||||| ||| | ||| | ||||||||| | ||| ||    
T  41487365 ccacttgggttggcctggtggtattggcttgggacttgggagtgt---tctcctcaaggtctcaggttcgattcttcccggtgccaatttaggtgggcta 41487461  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  41487462 atttagcttcttc 41487474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 18363699 - 18363810
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||| ||||| ||||||||| |||||| |||||||| ||||||||||  ||| || | ||  ||||||| || ||||||    
T  18363699 ccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctctagtaccaatttgag-gggtta 18363797  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  18363798 gtttagcttcttc 18363810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 48771941 - 48772052
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||| |||||||||  ||||||||| ||||| |||||| |||||  | ||||||||||| ||| |||| ||  |||||||| | ||| ||    
T  48771941 ccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgattatcccaagtaccaatttaggtgggcta 48772040  T
Q  101 atttagcttctt 112  Q
    ||||||||||||    
T  48772041 atttagcttctt 48772052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 26459483 - 26459371
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||||| |||||||| ||||||||||| ||| || |  | |||||||| |  ||||||    
T  26459483 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaaggggtta 26459384  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  26459383 gtttagcttcttc 26459371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 30579338 - 30579450
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||||||||||||||  ||||| ||  ||||| ||| |  |||||||| ||||||||||| |||||| |  | ||||||||| | ||| ||    
T  30579338 ccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaatttaggtgggcta 30579437  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  30579438 atttagcttcttc 30579450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 37085618 - 37085511
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaattt 104  Q
    |||||||||| |||||||||  ||||||||||||||| ||||||  ||||| | || |||||||| ||| ||||||   |||||||||| ||| ||||||    
T  37085618 ttgggttggcatggtggtattggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgattctccccaataccaatttaagtgggctaattt 37085519  T
Q  105 agcttctt 112  Q
    | ||||||    
T  37085518 aacttctt 37085511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 11721031 - 11720921
Alignment:
Q  3 acttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaat 102  Q
    |||| |||||||||||||||||  ||||||||  ||||| |||||| ||||| || || |||| ||| ||| ||||||| ||||||||  | ||| ||||    
T  11721031 acttcggttggcctggtggtattggcttgggacctgggaatgtgctcctccttaaggtatcagattcgattctccccagtgccaatttgggtgggctaat 11720932  T
Q  103 ttagcttcttc 113  Q
    |||||||||||    
T  11720931 ttagcttcttc 11720921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21854551 - 21854616
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcagg 66  Q
    ||||||||||||||||| ||||||  ||| ||||| ||||| |||||| |||||||||||||||||    
T  21854551 ccacttgggttggcctgatggtattggctagggatctgggagtgtgctcctcctcaaagtctcagg 21854616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 17041085 - 17040973
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||| || |||| ||  ||||||||| ||| | |||||| |||||||| ||||||||||| ||| || | || ||||||||  | |||| |    
T  17041085 ccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttgggtgggtca 17040986  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  17040985 atttagcttcttc 17040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 19553460 - 19553567
Alignment:
Q  4 cttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatt 103  Q
    |||||||||||||||||||||  |||||| |  ||||| |||||| |||||||| |||| |||||||||| ||||| |  |||||||| | ||| || ||    
T  19553460 cttgggttggcctggtggtattggcttgg-acctgggagtgtgctcctcctcaaggtcttaggttcaattctccccggttccaatttaggtgggctactt 19553558  T
Q  104 tagcttctt 112  Q
    |||||||||    
T  19553559 tagcttctt 19553567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 39631847 - 39631959
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |  ||| |||||||| ||||||||||| ||| || |  | |||||||| || ||||||    
T  39631847 ccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaatttgagggggtta 39631946  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  39631947 gtttagcttcttc 39631959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15137556 - 15137623
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggtt 68  Q
    |||||||||||||||||||||||    |||||||||| ||| |||||| |||||||| ||||||||||    
T  15137556 ccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggtt 15137623  T

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Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 24513800 - 24513875
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttc 76  Q
    |||||||||||||||| |||||||  ||||| ||||||||| ||| ||||||||  | ||||||||||| ||||||    
T  24513800 ccacttgggttggcctagtggtattggcttgagatttgggagtgtacttctccttgaggtctcaggttcgattttc 24513875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25021408 - 25021345
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctca 64  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||||| |||||||||||||||    
T  25021408 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 31835195 - 31835306
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||||||||| |  |||||||   | ||| |||||| |||||||| ||||||||||| ||| ||||  | ||||||||  ||||| ||    
T  31835195 ccacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcctcctcaaggtctcaggttcgattatccctggtgccaattttggcgggcta 31835294  T
Q  101 atttagcttctt 112  Q
     |||||||||||    
T  31835295 gtttagcttctt 31835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22760866 - 22760944
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttcccc 79  Q
    ||||||||||||| ||||||||||   |||||||  ||||| |||||| |||||||| ||||||||||| ||| |||||    
T  22760866 ccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcccc 22760944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 41519335 - 41519269
Alignment:
Q  3 acttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||||||||| |||||||   |||||||||| ||| |||||| |||||||| |||||||||||    
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttc 41519269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 2446311 - 2446423
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||| ||| ||||||  |||||||| |||||| |||||| |||||| |  ||||| |||| ||| || || | ||| ||||| | ||| ||    
T  2446311 ccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctccggtgccgatttaggtgggcta 2446410  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  2446411 atttagcttcttc 2446423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 15905746 - 15905635
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||||| |||||  ||||||||  ||||| |||||| |||||  | ||||||||||| ||| |||| |  | ||||||  | ||||||    
T  15905746 ccacttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcct-taggtctcaggttcgattctccctaatgtcaatttgggtgggtta 15905648  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  15905647 atttagcttcttc 15905635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 25590614 - 25590726
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||| |||| ||||||  ||||| ||| ||||| |||||| |||||| | ||||| ||||| ||||||  | | | |||||| || ||| ||    
T  25590614 ccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaatttgagtgggcta 25590713  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  25590714 atttagcttcttc 25590726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 23735300 - 23735237
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctca 64  Q
    ||||||||||||  || |||||||  |||| | ||||||||||||||| |||||||||||||||    
T  23735300 ccacttgggttgatctagtggtattggcttagaatttgggattgtgctcctcctcaaagtctca 23735237  T

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Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 37162423 - 37162312
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||| ||||||||| |||||| |  |||| ||||||||| ||||||||| ||||| |||||| |||| ||| || |  | |||||||| || || |||    
T  37162423 ccacttcggttggcctagtggtaaagacttgagatttgggagtgtgcttcttctcaaggtctcaagttcgattctctctggtgccaatttgaggggatta 37162324  T
Q  101 atttagcttctt 112  Q
     |||||||||||    
T  37162323 gtttagcttctt 37162312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 42711962 - 42712069
Alignment:
Q  2 cacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaa 101  Q
    ||||||||||||| | |||||||  |||||| |  ||||| |||||| |||||||| |||||| |||| ||| |||| || | ||||||| | ||| |||    
T  42711962 cacttgggttggcttagtggtattagcttggtacatgggagtgtgctcctcctcaaggtctcatgttcgattctccctagtgtcaatttaggtgggctaa 42712061  T
Q  102 tttagctt 109  Q
    ||||||||    
T  42712062 tttagctt 42712069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 43215187 - 43215298
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||| || |||||||  ||||||||  | ||| |||||| |||||||| ||||||||||| ||| || |    |||||||| || ||||||    
T  43215187 ccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctcttatgccaatttgagggggtta 43215286  T
Q  101 atttagcttctt 112  Q
     |||||||||||    
T  43215287 gtttagcttctt 43215298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 21558173 - 21558243
Alignment:
Q  43 tgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatttagcttcttc 113  Q
    |||||| |||||||| ||||||||||| ||| || |  | ||||||||| | |||||||||||||||||||    
T  21558173 tgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttcttc 21558243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23301675 - 23301622
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcct 54  Q
    ||||||||||||||||||||||||   ||||||| |||||| |||||| |||||    
T  23301675 ccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctcct 23301622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38374672 - 38374563
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||| ||||||| |  ||||||||  |  || |||||| |||||||| |||| |||||| ||| ||||| | ||||||||| | ||| ||    
T  38374672 ccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctccccggtgccaatttaggtgggcta 38374573  T
Q  101 atttagcttc 110  Q
     |||||||||    
T  38374572 gtttagcttc 38374563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 48125247 - 48125159
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaattt 90  Q
    ||||||||||||| |||||||| |  ||||||||  | ||| |||||| ||||  || ||||||||||||||||||||| | ||||||||    
T  48125247 ccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcctccg-aaggtctcaggttcaattttccccggtgccaattt 48125159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7801183 - 7801251
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||| |||||||||||||||   |||||||  ||||| |||||| ||| |||| |||||||||||    
T  7801183 ccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggttc 7801251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20335904 - 20335836
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||| || | |||||  |||||||| |||||| |||||| |||||| | |||||||||||    
T  20335904 ccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttc 20335836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 45709777 - 45709713
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||||||| |||||||  ||||||||| || || |||||| |||||| | |||||||||||    
T  45709777 ttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttc 45709713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 52116850 - 52116743
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaattt 104  Q
    ||||||||||||||||||||  |||||||| |||||| |||||| |||||||| ||||||||||||||| |||| || ||||||| | | ||| ||||||    
T  52116850 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgccaattaaggtgggctaattt 52116751  T
Q  105 agcttctt 112  Q
    ||||||||    
T  52116750 agcttctt 52116743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9165268 - 9165156
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||||| |||||||||||||||||||||||| || |  | |||||||| || ||||||    
T  9165268 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctggtgccaatttgagggggtta 9165169  T
Q  101 atttagcttcttc 113  Q
     ||||| ||||||    
T  9165168 ctttagtttcttc 9165156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 33700846 - 33700735
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  |||||| || ||||| |||||| |||||||| ||||||||||| ||| || |  | ||||||||||| ||||||    
T  33700846 ccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaagggggtta 33700747  T
Q  101 atttagcttctt 112  Q
     |||| ||||||    
T  33700746 gtttaacttctt 33700735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 2799865 - 2799977
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||| | ||||||| |||||||| ||||| ||| ||||| |||||| |||||||| ||||||||||| ||| || |  | |||||||| || ||||||    
T  2799865 ccacttcgcttggcctagtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggtta 2799964  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  2799965 gtttagcttcttc 2799977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 16893397 - 16893509
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||| |||| ||||||  ||||| ||||||||| ||| || |||||| | ||||||||||| |||||| || | | |||||| || ||| ||    
T  16893397 ccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtgggcta 16893496  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  16893497 atttagcttcttc 16893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 46146340 - 46146228
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||| | | ||||||  ||||||||| ||||| |||||| | | |||||||||||||||||||||||| | | ||||||||  | | ||||    
T  46146340 ccacttgggttggtccgatggtattagcttgggatctgggaatgtgctccccttcaaagtctcaggttcaattttcctcggtgccaatttgggtgtgtta 46146241  T
Q  101 atttagcttcttc 113  Q
    || ||||||||||    
T  46146240 atatagcttcttc 46146228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19528400 - 19528322
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttcccc 79  Q
    ||||||||||||||||||||||||  ||||||||| |  || |||||| |||||||| ||||||||||| ||| |||||    
T  19528400 ccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctcccc 19528322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 6122801 - 6122865
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||| ||| |||||||| |||||||| |||||| |||||| |||||||| |||||||||||    
T  6122801 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttc 6122865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 8177247 - 8177143
Alignment:
Q  9 gttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatttagct 108  Q
    |||||||| |||||||  ||||||||| ||||| |||||| |||||||| || |||||||| ||| || |  | |||||||| || |||||| |||||||    
T  8177247 gttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgagggggttagtttagct 8177148  T
Q  109 tcttc 113  Q
    |||||    
T  8177147 tcttc 8177143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 952514 - 952623
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||| ||||| |||||||| |  ||||||||  ||||| ||||||  ||||||||||||||||||  ||| |||||   | ||||||| | ||||||    
T  952514 ccacttgagttggtctggtggtgttggcttgggacctgggagtgtgctcatcctcaaagtctcaggttagattctccccgatgtcaatttaggtgggtta 952613  T
Q  101 atttagcttc 110  Q
    ||||||||||    
T  952614 atttagcttc 952623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31794337 - 31794276
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtct 62  Q
    |||||||||||||||| |||||||  |||||||| |||||| |||||| |||||||| ||||    
T  31794337 ccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtct 31794276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15786393 - 15786325
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||| || || ||||  ||||||||| ||||| |||||| |||||||| |||||||||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttc 15786325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40257402 - 40257474
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaatt 73  Q
    ||||||||||||||||||||||||  ||||| ||  ||||| |||||| |||||| | |||||| ||||||||    
T  40257402 ccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaatt 40257474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41508834 - 41508898
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcag 65  Q
    |||||||||||||||||||||||   | ||||||| ||||| |||||| |||||||| |||||||    
T  41508834 ccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtctcag 41508898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 51814497 - 51814605
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||||||| ||||||   |||| ||| || || |||||| |||||||| ||||||||||| ||| || || | ||||||||  | ||| ||    
T  51814497 ccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggcta 51814596  T
Q  101 atttagctt 109  Q
    |||||||||    
T  51814597 atttagctt 51814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 36371473 - 36371584
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  |||||| |  ||||| |||||| |||||||| |||| |||||| ||| || |    |||||||| || ||||||    
T  36371473 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctgatgccaatttgagggggtta 36371572  T
Q  101 atttagcttctt 112  Q
     |||||||||||    
T  36371573 gtttagcttctt 36371584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 15065018 - 15065079
Alignment:
Q  51 tcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatttagcttctt 112  Q
    ||||||| ||||||||||||||||||||| | | ||||||  | ||| ||||||||||||||    
T  15065018 tcctcaaggtctcaggttcaattttccccggtgtcaatttgggtgggctaatttagcttctt 15065079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 10150914 - 10150870
Alignment:
Q  29 ttgggatttgggattgtgcttctcctcaaagtctcaggttcaatt 73  Q
    |||||| |||||| ||| || ||||||||||||||||||||||||    
T  10150914 ttgggacttgggagtgtactcctcctcaaagtctcaggttcaatt 10150870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12259263 - 12259331
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||||||||| | ||| |||   |||||||||||||| |||||| |||||| |||||||| ||||    
T  12259263 ccacttgggttggcatagtgatattaacttgggatttgggagtgtgctcctcctcgaagtctcaagttc 12259331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 51703786 - 51703850
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||| || |||||||  |||||| || ||||| |||||| ||||||||||| ||||||||    
T  51703786 ttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttc 51703850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 14339617 - 14339725
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaattt 104  Q
    |||| |||||||||||||||  ||||||||||||||| |||||| |||||||| ||||||||||| ||| |||| || ||||||| | | ||| ||||||    
T  14339617 ttggattggcctggtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaattt 14339716  T
Q  105 agcttcttc 113  Q
    |||||||||    
T  14339717 agcttcttc 14339725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 30311309 - 30311421
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||| ||||||||||| |||||||| ||||||||| ||||| |||||| |||||||| ||||||||||| ||| ||    | |||||||| || ||||||    
T  30311309 ccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaatttgagggggtta 30311408  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  30311409 gtttagcttcttc 30311421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 15048134 - 15048023
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||| |  ||||||| ||||||||| ||||| |||||| |||||||| ||||||||||| ||| || |  | |||||||| || ||||||    
T  15048134 ccacttgggttggcttaatggtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctggtgccaatttgagggggtta 15048035  T
Q  101 atttagcttctt 112  Q
     |||| ||||||    
T  15048034 gtttaacttctt 15048023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 44743902 - 44743816
Alignment:
Q  27 gcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatttagcttcttc 113  Q
    ||||||||| ||||| |||||| |||||| | ||||||||||| ||| || |||| ||||||||  | |||||||||||||||||||    
T  44743902 gcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttcttc 44743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 2667869 - 2667977
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaattt 104  Q
    ||||||||||||||||||||  ||||||||| ||||| ||||||  ||||| | ||||||||||| ||| || | || | ||||||| | ||| || |||    
T  2667869 ttgggttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaatttaggtgggctagttt 2667968  T
Q  105 agcttcttc 113  Q
    |||||||||    
T  2667969 agcttcttc 2667977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4222144 - 4222212
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||||||||| | |||||||  ||||||||| ||||| |||||| ||||||||||||| ||||||    
T  4222144 ccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttc 4222212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 11642282 - 11642170
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||| |||||||  |||||||  |||||||| || ||||||| | |||||||| ||||||||||| ||| ||   || | ||||||||| ||||||    
T  11642282 ccacttggattggcctactggtataaacttgggatctgagattgtgatcctcctcaaggtctcaggttcgattatctttagtgtcaatttaagagggtta 11642183  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  11642182 gtttagcttcttc 11642170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 31520678 - 31520570
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||||||||||| ||  ||||||||| ||||| |||||| |||||| | |||| |||||  ||| || |||| | |||||| || ||| ||    
T  31520678 ccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaatttgagtgggcta 31520579  T
Q  101 atttagctt 109  Q
    |||||||||    
T  31520578 atttagctt 31520570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 47454690 - 47454578
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||  || |||||||  ||||| ||| | ||| |||||| |||||| | ||||||||||| ||| ||||||  ||||||||| | ||||||    
T  47454690 ccacttgggttgttctagtggtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggtta 47454591  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  47454590 gtttagcttcttc 47454578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27093434 - 27093367
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggtt 68  Q
    |||||||||||||||| |||||||  |||||| | |||||| |||||| |||||||| ||||||||||    
T  27093434 ccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtt 27093367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 11612307 - 11612413
Alignment:
Q  6 tgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaattta 105  Q
    ||||||||||||||||||| | |||||||  ||||| |||||| ||||| || ||||||||||| ||  ||||| | ||||||||| |  |  |||||||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcctccttaaggtctcaggttcgatgctccccggtgccaatttaggtcgactaattta 11612406  T
Q  106 gcttctt 112  Q
    |||||||    
T  11612407 gcttctt 11612413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 4844580 - 4844472
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaattt 104  Q
    ||||||||| ||||||||||   |||||||| ||||| |||||| |||||| | |||||||| || ||| || || | ||||||||  | ||| ||||||    
T  4844580 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaattt 4844481  T
Q  105 agcttcttc 113  Q
    |||||||||    
T  4844480 agcttcttc 4844472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 4870276 - 4870168
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaattt 104  Q
    ||||||||| ||||||||||   |||||||| ||||| |||||| |||||| | |||||||| || ||| || || | ||||||||  | ||| ||||||    
T  4870276 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaattt 4870177  T
Q  105 agcttcttc 113  Q
    |||||||||    
T  4870176 agcttcttc 4870168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27923116 - 27923048
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||| |||||||||||||||||  ||||||||  ||| | |||||| ||||||| ||||||||||||    
T  27923116 ccacttaggttggcctggtggtattggcttgggacatggaagtgtgctcctcctcatagtctcaggttc 27923048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36720384 - 36720452
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||| ||||||||||  ||||||||| ||||| |||||| |||||| | || ||||||||    
T  36720384 ccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttc 36720452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 46518631 - 46518743
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||| | |||||||  ||||||||| ||||| |||||| |||||||| || |||||||  ||| || |    |||||||| || ||||||    
T  46518631 ccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatgccaatttgagggggtta 46518730  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  46518731 gtttagcttcttc 46518743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 51903951 - 51903839
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||| ||||||| |||| ||||||  ||||||||| ||||| |||||| ||||||   ||||||||||| ||| || || | | |||||| || ||| ||    
T  51903951 ccacctgggttgacctgttggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgggcta 51903852  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  51903851 atttagcttcttc 51903839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 37788538 - 37788428
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||  |||||||   ||||| |  | ||| |||||| |||||||| ||||||||||| ||| || | || |||||||| || ||||||    
T  37788538 ccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgag-gggtta 37788440  T
Q  101 atttagcttctt 112  Q
    ||||||||||||    
T  37788439 atttagcttctt 37788428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5499480 - 5499391
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaattt 90  Q
    ||||||||||||||||||||||||   |||| ||| || || |||||| ||||| || |||| |||||| ||| ||||| | ||||||||    
T  5499480 ccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctccttaaggtctaaggttctattctccccggtgccaattt 5499391  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 53412948 - 53413053
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||| || |||||||  |||||  |  ||||| |||||| |||||||| ||||||||||||||| || |  | |||||||| || ||||||    
T  53412948 ccacttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttgagggggtta 53413047  T
Q  101 atttag 106  Q
     |||||    
T  53413048 gtttag 53413053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2597293 - 2597225
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||| ||||||||||  |||| |||||| ||| |||||| |||||  | |||||||||||    
T  2597293 ccacttgggttggtctggtggtattggcttcggatttaggagtgtgctcctccttgaggtctcaggttc 2597225  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3054997 - 3055065
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||||||||||||||||| |  ||||||||  | |||  ||||||||||||||  ||||||||||    
T  3054997 ccacttgggttggcctggtggtgttggcttgggaccttggagcgtgcttctcctcaagatctcaggttc 3055065  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8051217 - 8051285
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||||||||||||||  ||||||||  ||| | | ||||||||||| | |||||| ||||    
T  8051217 ccacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcctcgaggtctcaagttc 8051285  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10499182 - 10499114
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||||||||||||||  ||||||||| ||||| | ||||  ||||  | |||||||||||    
T  10499182 ccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttc 10499114  T

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Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 18540301 - 18540413
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  ||||||||  ||||| ||| ||||||||||| ||||||||||| ||| || |  | |||||||| || ||||||    
T  18540301 ccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagagggtta 18540400  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  18540401 atttagcttcttc 18540413  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2203495 - 2203603
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||||| |||||||| |||||||| |||||| ||||| | ||||||||  | ||| ||    
T  2203495 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggcta 2203594  T
Q  101 atttagctt 109  Q
    |||||||||    
T  2203595 atttagctt 2203603  T

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Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35641974 - 35641865
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||| ||||||||||  ||||| ||||||||| |||||| |||||| | ||||||||||| ||| || ||||  ||||||||   ||| ||    
T  35641974 ccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgattctctccagaaccaatttagatgggcta 35641875  T
Q  101 atttagcttc 110  Q
    ||||||||||    
T  35641874 atttagcttc 35641865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 16852343 - 16852455
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||||| |||||| | ||||||||||| ||| |||  || ||||||||| | ||| ||    
T  16852343 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccttagtgccaatttaggtgggcta 16852442  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  16852443 ttttagcttcttc 16852455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 23361722 - 23361650
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaatt 73  Q
    |||||||||||| |||||||||||   |||||||| ||||| |||||| |||||||| |||||||||||||||    
T  23361722 ccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaatt 23361650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30483957 - 30483885
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaatt 73  Q
    |||||||||||||||  |||||||  ||||||||| ||||| |||||| ||||||| ||||||||||||||||    
T  30483957 ccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttcaatt 30483885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 968365 - 968476
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||| ||||||||||||||||  ||||||||  ||||| |||||| |||||| | ||||||||||| ||| || ||   ||||||||| | ||| ||    
T  968365 ccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtgggcta 968464  T
Q  101 atttagcttctt 112  Q
    ||||||||||||    
T  968465 atttagcttctt 968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 11819783 - 11819847
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||| ||| |||||||| |||||||| |||||| |||||| |||||||| |||||||||||    
T  11819783 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttc 11819847  T

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Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 27750737 - 27750801
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||| ||| |||||||| |||||||| |||||| |||||| |||||||| |||||||||||    
T  27750737 ttgggttgccctcgtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttc 27750801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 28783063 - 28783175
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||| |||||||||  ||||| ||  ||||| |||||| |||||||| |||||| |||| ||| ||| | | ||||||||  | ||| ||    
T  28783063 ccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtgggcta 28783162  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  28783163 atttagcttcttc 28783175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 6536540 - 6536635
Alignment:
Q  18 gtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatttagcttcttc 113  Q
    |||||||  ||||||||  | ||| |||||| |||||||| ||||||||||||||| || |  | ||||||||| | |||||||||||||||||||    
T  6536540 gtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttcttc 6536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44780187 - 44780120
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggtt 68  Q
    |||||||||||||||| |||| ||  |||||||| |||||| |||||| |||||||| ||||||||||    
T  44780187 ccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtt 44780120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19703560 - 19703483
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccc 78  Q
    |||||||||||||||| |||||||  ||||||||  || || |||||| |||||||| ||||||||||| ||| ||||    
T  19703560 ccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccc 19703483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26688868 - 26688937
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttca 70  Q
    |||||||||||||||||||||| |  ||||||||  | ||| |||||| |||||||| ||||||||||||    
T  26688868 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggttca 26688937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3624583 - 3624651
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||||| ||| |||| |||||||||||    
T  3624583 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttc 3624651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 29858122 - 29858014
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||| |||||||||||||||  ||||||||   |||| |||||| |||||| | ||||||||||| |||  || | | ||||||||| | ||| ||    
T  29858122 ccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattcccctcggtgccaatttaggtgggcta 29858023  T
Q  101 atttagctt 109  Q
    |||||||||    
T  29858022 atttagctt 29858014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4830490 - 4830560
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaa 71  Q
    ||||||||||||||||||||||||  | ||||||| || || |||| | |||||| | |||||||||||||    
T  4830490 ccacttgggttggcctggtggtatttgtttgggatctgagagtgtgttcctcctcgaggtctcaggttcaa 4830560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 34628671 - 34628713
Alignment:
Q  27 gcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||| ||||| |||| ||||||||||||||||||||||    
T  34628671 gcttgggatctgggagtgtgtttctcctcaaagtctcaggttc 34628713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29431014 - 29431067
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcct 54  Q
    |||||||||||||||||| |||||  |||||||| |||||| |||||| |||||    
T  29431014 ccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctcct 29431067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 40591735 - 40591799
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggtt 68  Q
    ||||||| ||||||||||||||||  |||| ||| |||||| ||||   |||||||||||||||||||    
T  40591735 ccacttgtgttggcctggtggtattggcttcggacttgggagtgtg---ctcctcaaagtctcaggtt 40591799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6436628 - 6436564
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcag 65  Q
    |||||||||||| |||||||||||  |||||||| || ||| |||||| |||| ||| |||||||    
T  6436628 ccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcctccgcaaggtctcag 6436564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 23052596 - 23052484
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||| |||||||||||||||||  |||||||| |||||| ||||||||||||||| ||||||||||| ||| |||| || |||| |||  | ||| ||    
T  23052596 ccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgccagtttgggtgggcta 23052497  T
Q  101 atttagcttcttc 113  Q
    |||||| ||||||    
T  23052496 atttagtttcttc 23052484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 37480078 - 37480190
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||||||||||||||  ||||||||  || || |||||| |||||||| ||||||||||| ||| ||||| |  |||||||  | ||| ||    
T  37480078 ccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtgggcta 37480177  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  37480178 atttagcttcttc 37480190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 39714995 - 39715103
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||| |||||||||   |||||||  ||||| |||||| |||||| | ||||||||||| ||| |||||||| |||||||| | ||| ||    
T  39714995 ccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagcaccaatttaggtgggcta 39715094  T
Q  101 atttagctt 109  Q
    |||||||||    
T  39715095 atttagctt 39715103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7799108 - 7798997
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||| |||||||||||  |||||||| |||||| |||||| |||||| |  |||||| ||| ||| || |||| |||||||||||  || ||    
T  7799108 ccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaatttaag-tggcta 7799010  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  7799009 atttagcttcttc 7798997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 29503274 - 29503385
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  | ||||||  ||||| |||||| |||||||| ||||||||||| ||| | ||| | | ||||||||| |||  |    
T  29503274 ccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattct-cccggtgtcaatttaagtgggcaa 29503372  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  29503373 atttagcttcttc 29503385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 42327468 - 42327400
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||||| |||||||| |||||||||||    
T  42327468 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttc 42327400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11062363 - 11062430
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggtt 68  Q
    |||||||||||||||| ||| |||  |||||| | |||||| ||||||||||||||| ||||||||||    
T  11062363 ccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtt 11062430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 19016034 - 19016145
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||| ||| ||||||  ||||| || |||||| |||||| |||||| | |||||| |||  ||| ||||| | |||||||||||  || ||    
T  19016034 ccacttgggttggtctgatggtattggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctccccggtgccaatttaagtaggcta 19016133  T
Q  101 atttagcttctt 112  Q
    ||||||||||||    
T  19016134 atttagcttctt 19016145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1435067 - 1435131
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcag 65  Q
    |||||||||||||| | ||||||   ||||||||||| ||| ||||||||||||||| |||||||    
T  1435067 ccacttgggttggcatagtggtactggcttgggatttaggagtgtgcttctcctcaaggtctcag 1435131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 21195745 - 21195681
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||| ||| |||||||| |||||| | |||||| |||||| |||||||| |||||||||||    
T  21195745 ttgggttgccctagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttc 21195681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 42602557 - 42602669
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||||| || ||||| |||| |||||  ||| || || | ||||||||  | ||| ||    
T  42602557 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtgggcta 42602656  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  42602657 atttagcttcttc 42602669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 42922417 - 42922529
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaa-gtctcaggttcaattttccccagcgccaatttaagcgggtt 99  Q
    |||||||||||||||| |||||||  |||||| |  ||||| |||||| ||||||||| ||||||||||| ||| || |  | |||||||| |  |||||    
T  42922417 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctggtgccaatttgatggggtt 42922516  T
Q  100 aatttagcttctt 112  Q
    | |||||||||||    
T  42922517 agtttagcttctt 42922529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 14500280 - 14500391
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||| ||||||| |||||||| ||||| ||| ||||| |||||| |||||| | ||||||| ||| ||| || |  | |||||||| || ||| ||    
T  14500280 ccacttggtttggcctagtggtataagcttgagatctgggagtgtgctcctcctctaggtctcagattcgattctctctggtgccaatttgagggggata 14500379  T
Q  101 atttagcttctt 112  Q
     |||||||||||    
T  14500380 gtttagcttctt 14500391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16918651 - 16918584
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggtt 68  Q
    |||||||||||||||| |||||||  | ||||||| ||||| |||||| |||||||| |||| |||||    
T  16918651 ccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggtt 16918584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16381727 - 16381671
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaa 57  Q
    |||||||||||||||| |||||||| ||||||||| || || ||| || ||||||||    
T  16381727 ccacttgggttggcctagtggtataggcttgggatctgagagtgttctcctcctcaa 16381671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 26482096 - 26482207
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||| |||||||||| |||| |  ||||||||  | ||| |||||| ||| |||| ||||||||||| ||| ||| ||| |||||||| || ||| ||    
T  26482096 ccacttaggttggcctgatggtgttggcttgggacctaggagtgtgctcctc-tcaaggtctcaggttcgattctcctcagtgccaatttcagtgggcta 26482194  T
Q  101 atttagcttcttc 113  Q
    |||| ||||||||    
T  26482195 atttggcttcttc 26482207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 29197449 - 29197345
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||| |||||||||   ||||||| |||||| |||||| |||||  | |||||| |||| ||| | ||| | ||||||||| | ||| ||    
T  29197449 ccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctccttgatgtctcatgttcgattcttcccggtgccaatttaggtgggcta 29197350  T
Q  101 attta 105  Q
    |||||    
T  29197349 attta 29197345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 31681094 - 31681130
Alignment:
Q  43 tgtgcttctcctcaaagtctcaggttcaattttcccc 79  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  31681094 tgtgcttctcctcaaagtctcaggttcgattctcccc 31681130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 21418477 - 21418585
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaattt 104  Q
    ||||||||||||||||||||  |||||||| |||||| |||||| |||||| | |||||| |||| ||| |||| || ||||||| | | ||| ||||||    
T  21418477 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctccctagtgccaattaaggtgggctaattt 21418576  T
Q  105 agcttcttc 113  Q
    |||||||||    
T  21418577 agcttcttc 21418585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12188376 - 12188264
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||||| |||||||| || ||| |||| ||| || | || |||||||| || ||||||    
T  12188376 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttgagggggtta 12188277  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  12188276 gtttagcttcttc 12188264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 15951371 - 15951264
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaattt 104  Q
    |||||||| ||| |||||||| ||||| ||||||||| |||||| |||||||| |||||| |||||||| || |  |  ||||||| || |||||| |||    
T  15951371 ttgggttgtccttgtggtataagcttgagatttgggagtgtgctcctcctcaaggtctcatgttcaattctctctggtaccaatttgagagggttagttt 15951272  T
Q  105 agcttctt 112  Q
    ||||||||    
T  15951271 agcttctt 15951264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 11423572 - 11423658
Alignment:
Q  4 cttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaattt 90  Q
    |||||| ||| ||||||||||   |||||||||||||| | ||||||||||| | ||||||||||| |||||| |||| | ||||||    
T  11423572 cttgggctggtctggtggtattgacttgggatttgggagtatgcttctcctcgaggtctcaggttcgattttctccagtgtcaattt 11423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30127403 - 30127512
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||| ||||||||||  ||||||| | ||||| |||||| ||| || | ||||||||||| ||| |  || | ||||||||| |  |||||    
T  30127403 ccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaatttaggtaggtta 30127502  T
Q  101 atttagcttc 110  Q
    ||||||||||    
T  30127503 atttagcttc 30127512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33549107 - 33549175
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||| ||||||||||  ||||||||  ||||| |||||| |||||| | |||||||||||    
T  33549107 ccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttc 33549175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 10338246 - 10338179
Alignment:
Q  2 cacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||| |||||||||  ||||||||  | ||| |||||| |||||||| |||||||||||    
T  10338246 cacttgggttggcatggtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttc 10338179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 20213061 - 20213112
Alignment:
Q  18 gtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||||||||||||  ||||| |||||| |||||||| |||||||||||    
T  20213061 gtggtatacgcttgggacctgggagtgtgctcctcctcaatgtctcaggttc 20213112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 22107084 - 22107135
Alignment:
Q  18 gtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||||||||||||  ||||| |||||| |||||||| |||||||||||    
T  22107084 gtggtatacgcttgggacctgggagtgtgctcctcctcaatgtctcaggttc 22107135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 6519201 - 6519135
Alignment:
Q  43 tgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatttagctt 109  Q
    ||||||||| | ||| |||| |||||| ||| || || ||||||||||||| |||||||||||||||    
T  6519201 tgtgcttcttcacaaggtcttaggttcgattatctccggcgccaatttaagtgggttaatttagctt 6519135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 6776679 - 6776617
Alignment:
Q  2 cacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctca 64  Q
    |||||||||||||||||||||||  ||||||||| ||||  |||||| |||||| | ||||||    
T  6776679 cacttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcctcgatgtctca 6776617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 21549210 - 21549099
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||||| ||||| ||||||||| |||| |||||| | || |||||||| || ||||||    
T  21549210 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctctagtgccaatttgag-gggtta 21549112  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  21549111 gtttagcttcttc 21549099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16457813 - 16457902
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaattt 90  Q
    |||||| |||||||||||||||||  ||||||||  | ||| |||||| |||||||| |||||| |||||||| ||||| | ||||||||    
T  16457813 ccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctccccggtgccaattt 16457902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25627060 - 25627128
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||||||||||| |||||||  |||||| | |||||| |||||| |||||||| |||||||||||    
T  25627060 ccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttc 25627128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 26078124 - 26078024
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  | |||||| |||||| | |||||||| |||| ||||||||||| ||| || | || |||||||| || ||||||    
T  26078124 ccacttgggttggcctagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctctctagtgccaatttgagggggtta 26078025  T
Q  101 a 101  Q
    |    
T  26078024 a 26078024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 29692455 - 29692387
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaatt 73  Q
    ||||||||| ||||||||||  | ||||||| ||||| |||||| ||||||||||||||||||| ||||    
T  29692455 ttgggttggtctggtggtattggattgggatctgggagtgtgctcctcctcaaagtctcaggtttaatt 29692387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30883271 - 30883182
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaattt 90  Q
    ||||||||||||| || |||||||  ||||||||  ||||| |||||| |||||||| |||||| |||||||| || |||| | ||||||    
T  30883271 ccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctcaccagtgtcaattt 30883182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 19043461 - 19043572
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| ||| |||   ||||| | |||||| |||| | || ||||||||||||||||||||  || | || |||||||| || ||||||    
T  19043461 ccacttgggttggcctagtgctattgacttggaacttgggagtgtgttccttctcaaagtctcaggttcaatcctctctagtgccaatttgag-gggtta 19043559  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  19043560 gtttagcttcttc 19043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21589291 - 21589359
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||||||||||||||  ||||||||  ||||| | |||| |||||| | |||||||||||    
T  21589291 ccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcgatgtctcaggttc 21589359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 16436622 - 16436695
Alignment:
Q  2 cacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttc 76  Q
    ||||||||||||||| |||||||  |||||||| || ||| |||||| |||||||| |||||| |||| ||||||    
T  16436622 cacttgggttggcctagtggtattggcttgggactt-ggagtgtgctcctcctcaaggtctcatgttcgattttc 16436695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 22020932 - 22020823
Alignment:
Q  4 cttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatt 103  Q
    ||||||||||| | |||||||  ||||||||| ||||| |||||| |||||  ||||||||| ||| ||| || |||| |  |||||| | ||| |||||    
T  22020932 cttgggttggcatagtggtattagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctccagtgttaatttaggtgggctaatt 22020833  T
Q  104 tagcttcttc 113  Q
    ||| ||||||    
T  22020832 tagtttcttc 22020823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 6844732 - 6844844
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||||| ||||||||   ||||| |||||||| |||| | |||||| | |||| |||||| ||| || |  | ||||||||| | || |||    
T  6844732 ccacttgggttggccaggtggtattgacttggaatttgggagtgtgttcctcctcgaggtctaaggttcgattatctctcgtgccaatttaggtggatta 6844831  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  6844832 gtttagcttcttc 6844844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 8278348 - 8278236
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||| ||| ||||||  |||||||| |||||| |||||| |||||| |  ||||| |||  ||| || || | ||| ||||| | ||| ||    
T  8278348 ccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagtttgattatctccggtgccgatttaggtgggcta 8278249  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  8278248 atttagcttcttc 8278236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 12877724 - 12877764
Alignment:
Q  29 ttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||| |||| |||||||||| |||||||||||    
T  12877724 ttgggatttgggagtgtgtttctcctcaatgtctcaggttc 12877764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 16773810 - 16773922
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||| ||||| ||||||||||   |||||||  ||||| |||||| |||||| | ||||||||||| ||| || |    ||||||||| | ||| ||    
T  16773810 ccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggcta 16773909  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  16773910 atttagcttcttc 16773922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22737085 - 22737153
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||| || |||||||  |||||||| |||| | |||||| |||| ||| |||||||||||    
T  22737085 ccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctccccaatgtctcaggttc 22737153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 29075784 - 29075896
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||| |||| |||||||  ||||||||| ||||| |||||| |||||| |  ||||| |||| ||| || |  | |||||||||   ||| ||    
T  29075784 ccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatgggcta 29075883  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  29075884 atttagcttcttc 29075896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 30109381 - 30109270
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||| |||||||||  ||||| ||  ||||| |||||| |||||  | ||||||||||| | || |||| | || |||||| | ||| ||    
T  30109381 ccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcga-ttcccccggtgctaatttaggtgggcta 30109283  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  30109282 atttagcttcttc 30109270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7292871 - 7292759
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||| || |||||||  |||||| |  ||||| |||||| |||||||||||||||||||| ||| || | || |||||||| || ||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaatttgagggggtta 7292772  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  7292771 gtttagcttcttc 7292759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 4249180 - 4249292
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||| | ||||||| |||||||| ||||||||||| ||| |||||| |||||||| ||||||||||  ||| || |  | |||||||| || ||||||    
T  4249180 ccacttcgcttggcctagtggtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgagggggtta 4249279  T
Q  101 atttagcttcttc 113  Q
     ||||||||||||    
T  4249280 gtttagcttcttc 4249292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 19238650 - 19238542
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||||||||||||||  |||||||| |||||| |||||| |||||| | ||||| ||||| ||| ||||| |  |||||||  | ||| ||    
T  19238650 ccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctccccggtaccaatttgggtgggcta 19238551  T
Q  101 atttagctt 109  Q
    |||||||||    
T  19238550 atttagctt 19238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 37109424 - 37109312
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||||| |||||||| ||||||||||| ||| || |  | |||||||| || ||||||    
T  37109424 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggtta 37109325  T
Q  101 atttagcttcttc 113  Q
     ||||| ||||||    
T  37109324 gtttagtttcttc 37109312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 39509073 - 39509181
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||| ||  |||||   ||||||||| ||||| |||||| |||||| | ||||||||||| ||| ||||||| | ||||||| | ||||||    
T  39509073 ccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaatttaggtgggtta 39509172  T
Q  101 atttagctt 109  Q
    |||||||||    
T  39509173 atttagctt 39509181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 19680861 - 19680750
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||| ||||||| ||||||| ||||||||| |||||| ||||||  ||||||| |||| |||||| ||| || |  | |||||||||||  |||||    
T  19680861 ccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctggtgccaatttaaggaggtta 19680762  T
Q  101 atttagcttctt 112  Q
     |||||||||||    
T  19680761 gtttagcttctt 19680750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31826612 - 31826680
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||||||| ||| |||||||| |||||||||||| || |||||| |||||||| |||||| ||||    
T  31826612 ccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttc 31826680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 49576963 - 49576899
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||||||||||  |||| ||| |||||| |||||| |||||||| |||||||||||    
T  49576963 ttgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttc 49576899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 51250595 - 51250484
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||||||||||||||  ||||||||| ||||| |||||| | ||||||  ||||| |||| |||  | || | ||||||||  | ||| ||    
T  51250595 ccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtgggcta 51250496  T
Q  101 atttagcttctt 112  Q
    ||||||||||||    
T  51250495 atttagcttctt 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 14451792 - 14451711
Alignment:
Q  28 cttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatttagctt 109  Q
    |||||||| || || |||||| |||||||| |||| |||||||||||| ||| | | ||||||||| ||| |||||||||||    
T  14451792 cttgggatatgagagtgtgctcctcctcaaggtcttaggttcaatttttcccggtgtcaatttaagtgggataatttagctt 14451711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 30938264 - 30938180
Alignment:
Q  29 ttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatttagcttcttc 113  Q
    ||||||| | ||| |||||| |||||| | ||||||||||| ||| ||||||  ||||||||| | |||||| ||||||||||||    
T  30938264 ttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttcttc 30938180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 37720287 - 37720175
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||||||| |||  ||||||||  ||||| |||||  |||||||| ||| ||||||| ||| ||||  |   ||||||| | ||| ||    
T  37720287 ccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggtcccaggttcgattctcccagggatcaatttaggtgggcta 37720188  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  37720187 atttagcttcttc 37720175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 38869783 - 38869883
Alignment:
Q  13 gcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatttagcttctt 112  Q
    |||| |||||||  ||||||||| ||||| |||||| |||||||| ||||||||||| |||  | |  | |||||||| || |||||| |||||||||||    
T  38869783 gcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaatttgagggggttagtttagcttctt 38869882  T
Q  113 c 113  Q
    |    
T  38869883 c 38869883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 55427273 - 55427165
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||||||||||||||  ||||||||  ||||| | |||| || ||| | ||||||||||| ||| ||| | | ||||||||  | ||| ||    
T  55427273 ccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaatttgggtgggcta 55427174  T
Q  101 atttagctt 109  Q
    |||||||||    
T  55427173 atttagctt 55427165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40284059 - 40283992
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggtt 68  Q
    |||||||||||||| || ||||||  |||||||| |||||| ||||| ||||||||| |||| |||||    
T  40284059 ccacttgggttggcatgatggtattggcttgggacttgggagtgtgcatctcctcaaggtctaaggtt 40283992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 23377985 - 23378071
Alignment:
Q  27 gcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatttagcttcttc 113  Q
    ||||||||  ||||| |||||| |||||||| ||||||||||| ||| || | || |||||||| || ||| || ||||||||||||    
T  23377985 gcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagcttcttc 23378071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 37980219 - 37980110
Alignment:
Q  2 cacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaa 101  Q
    ||||||||||||||||||| | |  ||||||||  | ||| |||||| ||| |||| ||||||||||| ||| ||||||| | |||||| |||||| ||     
T  37980219 cacttgggttggcctggtgatgttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcgattctccccagtgtcaatttcagcgggctag 37980121  T
Q  102 tttagcttctt 112  Q
    ||| |||||||    
T  37980120 tttggcttctt 37980110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 2185099 - 2184994
Alignment:
Q  7 gggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatttag 106  Q
    |||||||||| ||||||   |||||| |  ||||| |||||| || ||||||||||||||||| ||| || ||   |||||||| || |||||| |||||    
T  2185099 gggttggcctagtggtaatggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctccgatgccaatttgagggggttagtttag 2185000  T
Q  107 cttctt 112  Q
    ||||||    
T  2184999 cttctt 2184994  T

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Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 37274533 - 37274420
Alignment:
Q  1 ccacttgggttggcctggtggta-tacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtt 99  Q
    |||||||||||||||| || ||| |  ||||||||  ||||| |||||| |||||||| |||| |||||| ||| || |  | || |||||||| ||| |    
T  37274533 ccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgggct 37274434  T
Q  100 aatttagcttcttc 113  Q
    ||||||||||||||    
T  37274433 aatttagcttcttc 37274420  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7949527 - 7949415
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||| |||||| | |||||  ||||||||  | ||| |||||| |||||||| ||||||||||| ||| || |  | | ||||||| | ||| ||    
T  7949527 ccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgggcta 7949428  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  7949427 atttagcttcttc 7949415  T

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Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9241098 - 9241030
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||||||||||||||  ||||||||| ||| | |||||| || ||| | |||| ||||||    
T  9241098 ccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcctgctcgaggtctgaggttc 9241030  T

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Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31759731 - 31759667
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcag 65  Q
    ||||||||||||  || |||||||  |||||||| |||||| |||||| |||||||| |||||||    
T  31759731 ccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcag 31759667  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41347036 - 41346968
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||||||||||||||| ||||||  | ||| ||| ||||| | |||| |||||| |||||||||||||    
T  41347036 ccacttgggttggcctgatggtattggtttgagatctgggagtatgctcctcctcgaagtctcaggttc 41346968  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 43728434 - 43728470
Alignment:
Q  37 tgggattgtgcttctcctcaaagtctcaggttcaatt 73  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  43728434 tgggagtgtgctcctcctcaaagtctcaggttcaatt 43728470  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 95044 - 94935
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    |||||||||||||||| |||||||  |||||| |  ||||| |||||| |||||||| ||||||||||||||| || |  | ||||||||||  ||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctctggtgccaatttaa--gggtta 94947  T
Q  101 atttagcttctt 112  Q
     |||||||||||    
T  94946 gtttagcttctt 94935  T

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Target: scaffold1367 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 910 - 845
Alignment:
Q  4 cttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||| ||||||||||||||  ||||||||| ||||| |||||| |||||| |||||||||||||    
T  910 cttggggtggcctggtggtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttc 845  T

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Target: scaffold0258 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 15396 - 15284
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggtta 100  Q
    ||||||||||||| ||||||||||  ||||||||  ||||| |||||| |||||| | ||||||||||| ||| || |    ||||||||| | ||| ||    
T  15396 ccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgggcta 15297  T
Q  101 atttagcttcttc 113  Q
    |||||||||||||    
T  15296 atttagcttcttc 15284  T

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Target: scaffold0122 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 6988 - 6924
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||||||||| |||||||  |||||||| | |||| |||||| ||||||||||||||||||||    
T  6988 ttgggttggcctagtggtattggcttgggactggggagtgtgctcctcctcaaagtctcaggttc 6924  T

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Target: scaffold0299 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 11534 - 11599
Alignment:
Q  4 cttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    |||||| ||||||||||||||  ||||||||| ||||| |||||| |||||| | |||||||||||    
T  11534 cttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttc 11599  T

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Target: scaffold0070 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 42589 - 42482
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaattt 104  Q
    |||||||||||| |||||||   ||||| || ||||| | |||| ||||||| |||||||||||| ||| ||    | ||||||||||| ||||||||||    
T  42589 ttgggttggcctagtggtattgacttggaatctgggagtatgctcctcctcagagtctcaggttcgattctctttggtgccaatttaag-gggttaattt 42491  T
Q  105 agcttcttc 113  Q
    |||||||||    
T  42490 agcttcttc 42482  T

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Target: scaffold0194 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 13118 - 13051
Alignment:
Q  2 cacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttc 69  Q
    ||||| ||||||| |||||||||  ||||| ||| ||||| |||||| |||||||| |||||||||||    
T  13118 cacttcggttggcttggtggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttc 13051  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 15842 - 15739
Alignment:
Q  9 gttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccagcgccaatttaagcgggttaatttagct 108  Q
    ||||||||||||||||  ||||||||||| ||| | |||| |||||||| |||||| |||  ||| ||| | | ||||||||  | ||| ||||||||||    
T  15842 gttggcctggtggtattggcttgggattttggagtatgctcctcctcaaggtctcaagtttgattctccgcggtgccaatttgggtgggctaatttagct 15743  T
Q  109 tctt 112  Q
    ||||    
T  15742 tctt 15739  T

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Target: scaffold0291 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 2539 - 2463
Alignment:
Q  5 ttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaattttccccag 81  Q
    ||||||||| | ||||||||  | || |||| ||||| |||||| |||||||| ||||||||||| ||| |||||||    
T  2539 ttgggttggtccggtggtattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgattctccccag 2463  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 41706 - 41634
Alignment:
Q  1 ccacttgggttggcctggtggtatacgcttgggatttgggattgtgcttctcctcaaagtctcaggttcaatt 73  Q
    |||||||||||||||| |||||||  ||||| ||| || || | |||| |||||| | |||||||||||||||    
T  41706 ccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaatt 41634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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