View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14335_low_10 (Length: 595)

Name: NF14335_low_10
Description: NF14335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14335_low_10
NF14335_low_10
[»] chr1 (44 HSPs)
chr1 (16-585)||(4878327-4878896)
chr1 (472-569)||(12534044-12534141)
chr1 (44-116)||(1188681-1188753)
chr1 (40-117)||(24600403-24600480)
chr1 (36-116)||(19283540-19283620)
chr1 (40-116)||(37850689-37850765)
chr1 (44-114)||(1187457-1187527)
chr1 (43-109)||(44290550-44290616)
chr1 (50-116)||(50469180-50469246)
chr1 (43-108)||(3550721-3550786)
chr1 (43-116)||(5320057-5320130)
chr1 (43-116)||(17294570-17294643)
chr1 (43-108)||(22793279-22793344)
chr1 (47-116)||(34649431-34649500)
chr1 (43-116)||(41157368-41157441)
chr1 (43-116)||(41184517-41184590)
chr1 (58-110)||(47379892-47379944)
chr1 (43-103)||(50052115-50052175)
chr1 (41-109)||(50556451-50556519)
chr1 (58-117)||(24132092-24132151)
chr1 (43-109)||(3537239-3537305)
chr1 (43-109)||(32594808-32594874)
chr1 (74-116)||(35154162-35154204)
chr1 (43-116)||(37556104-37556178)
chr1 (43-109)||(44290917-44290983)
chr1 (43-116)||(5996963-5997036)
chr1 (43-103)||(9955913-9955974)
chr1 (43-116)||(22077587-22077660)
chr1 (43-116)||(26661614-26661687)
chr1 (43-116)||(29798192-29798265)
chr1 (43-116)||(34364500-34364573)
chr1 (48-109)||(41142372-41142433)
chr1 (29-94)||(44091909-44091974)
chr1 (44-116)||(26661991-26662063)
chr1 (40-87)||(10351182-10351229)
chr1 (43-109)||(45084382-45084448)
chr1 (43-116)||(66564-66637)
chr1 (43-116)||(24448270-24448343)
chr1 (43-116)||(34364918-34364991)
chr1 (43-108)||(40082408-40082473)
chr1 (72-116)||(22077243-22077287)
chr1 (35-103)||(35530398-35530466)
chr1 (43-103)||(37555736-37555796)
chr1 (44-76)||(50081150-50081182)
[»] chr8 (32 HSPs)
chr8 (42-116)||(4154371-4154445)
chr8 (52-119)||(20995502-20995569)
chr8 (46-116)||(4154761-4154831)
chr8 (43-118)||(9620768-9620843)
chr8 (46-117)||(41972150-41972221)
chr8 (43-109)||(3669687-3669753)
chr8 (48-116)||(3038387-3038455)
chr8 (25-116)||(8918838-8918929)
chr8 (70-116)||(147822-147868)
chr8 (43-109)||(45122002-45122068)
chr8 (40-114)||(45122146-45122220)
chr8 (43-116)||(5420644-5420717)
chr8 (43-116)||(9309348-9309421)
chr8 (58-103)||(40518588-40518633)
chr8 (44-93)||(44358163-44358212)
chr8 (43-116)||(9308970-9309045)
chr8 (48-116)||(9608738-9608806)
chr8 (43-102)||(70366-70425)
chr8 (58-116)||(6876969-6877028)
chr8 (43-102)||(34835216-34835275)
chr8 (43-102)||(41416263-41416322)
chr8 (43-109)||(1014337-1014403)
chr8 (58-103)||(147457-147502)
chr8 (48-109)||(3670060-3670121)
chr8 (60-109)||(6731904-6731953)
chr8 (70-115)||(12283867-12283912)
chr8 (43-96)||(20870665-20870718)
chr8 (43-116)||(25561908-25561981)
chr8 (43-116)||(30359602-30359675)
chr8 (26-103)||(43274854-43274931)
chr8 (43-103)||(18372791-18372851)
chr8 (43-99)||(25561736-25561792)
[»] chr4 (35 HSPs)
chr4 (43-116)||(11348418-11348491)
chr4 (40-116)||(28034222-28034298)
chr4 (43-103)||(15841074-15841134)
chr4 (50-116)||(1731744-1731810)
chr4 (43-115)||(44620654-44620726)
chr4 (43-109)||(54017685-54017751)
chr4 (43-116)||(3244541-3244614)
chr4 (43-116)||(25483329-25483402)
chr4 (50-103)||(49302910-49302963)
chr4 (43-116)||(52884880-52884953)
chr4 (48-116)||(52884688-52884756)
chr4 (43-117)||(2740692-2740766)
chr4 (26-116)||(50002419-50002509)
chr4 (43-116)||(3341121-3341194)
chr4 (43-116)||(4390191-4390264)
chr4 (43-116)||(10245913-10245986)
chr4 (43-116)||(39404391-39404464)
chr4 (40-116)||(12197371-12197447)
chr4 (43-95)||(15841458-15841510)
chr4 (40-108)||(16888903-16888971)
chr4 (48-116)||(22183359-22183427)
chr4 (41-109)||(23556954-23557022)
chr4 (40-103)||(20826223-20826286)
chr4 (49-116)||(39792956-39793023)
chr4 (43-109)||(2741071-2741137)
chr4 (43-109)||(6975546-6975612)
chr4 (44-78)||(39099845-39099879)
chr4 (58-116)||(41707569-41707627)
chr4 (43-116)||(4955407-4955480)
chr4 (36-116)||(43174499-43174580)
chr4 (43-116)||(49076538-49076611)
chr4 (43-103)||(760195-760255)
chr4 (48-116)||(3700358-3700426)
chr4 (43-103)||(50459727-50459787)
chr4 (43-99)||(54343091-54343147)
[»] chr2 (37 HSPs)
chr2 (43-117)||(33561543-33561617)
chr2 (43-116)||(33953863-33953936)
chr2 (43-117)||(962590-962664)
chr2 (47-116)||(29873633-29873702)
chr2 (43-109)||(7598609-7598675)
chr2 (50-116)||(33954360-33954426)
chr2 (50-103)||(29874122-29874175)
chr2 (43-116)||(30323457-30323530)
chr2 (43-116)||(42514642-42514715)
chr2 (43-103)||(40733523-40733583)
chr2 (43-116)||(41678459-41678534)
chr2 (49-116)||(31468844-31468911)
chr2 (43-109)||(5543090-5543156)
chr2 (43-109)||(36178697-36178763)
chr2 (58-116)||(36785670-36785728)
chr2 (43-109)||(37106188-37106254)
chr2 (72-117)||(16590880-16590925)
chr2 (43-116)||(28254329-28254402)
chr2 (43-116)||(28531406-28531479)
chr2 (43-116)||(30313171-30313243)
chr2 (43-116)||(37632689-37632762)
chr2 (43-116)||(38796310-38796383)
chr2 (43-116)||(38796712-38796785)
chr2 (43-103)||(6421391-6421451)
chr2 (40-116)||(40679718-40679794)
chr2 (43-114)||(35580815-35580886)
chr2 (26-116)||(6712969-6713059)
chr2 (74-116)||(12529151-12529193)
chr2 (43-109)||(14745759-14745825)
chr2 (58-116)||(16542442-16542500)
chr2 (43-109)||(41283567-41283633)
chr2 (43-116)||(15880256-15880329)
chr2 (43-116)||(29676896-29676969)
chr2 (48-109)||(37105924-37105985)
chr2 (43-75)||(2336658-2336690)
chr2 (41-101)||(34481274-34481334)
chr2 (72-116)||(43443103-43443147)
[»] chr5 (27 HSPs)
chr5 (26-116)||(12662727-12662817)
chr5 (43-116)||(31509616-31509689)
chr5 (43-116)||(36522329-36522402)
chr5 (43-106)||(41170637-41170700)
chr5 (58-108)||(36522003-36522053)
chr5 (43-116)||(15370092-15370165)
chr5 (43-116)||(36492309-36492382)
chr5 (43-103)||(18603212-18603272)
chr5 (42-114)||(35150002-35150074)
chr5 (44-116)||(36568660-36568732)
chr5 (58-116)||(26074253-26074311)
chr5 (43-116)||(1028609-1028682)
chr5 (43-116)||(13415852-13415925)
chr5 (48-101)||(35914857-35914910)
chr5 (67-116)||(36527199-36527248)
chr5 (48-108)||(299490-299550)
chr5 (43-95)||(31509745-31509797)
chr5 (58-109)||(32487394-32487445)
chr5 (48-103)||(38427554-38427609)
chr5 (41-103)||(300965-301027)
chr5 (43-109)||(9498746-9498812)
chr5 (58-116)||(26074889-26074947)
chr5 (43-109)||(40296407-40296473)
chr5 (43-116)||(6224189-6224262)
chr5 (71-116)||(24489324-24489369)
chr5 (43-116)||(41632775-41632848)
chr5 (43-103)||(26074324-26074384)
[»] chr3 (37 HSPs)
chr3 (40-125)||(8327888-8327973)
chr3 (43-114)||(39336321-39336392)
chr3 (40-116)||(43346880-43346956)
chr3 (58-117)||(33803359-33803418)
chr3 (58-116)||(39914245-39914303)
chr3 (40-117)||(33175753-33175830)
chr3 (43-116)||(47965007-47965080)
chr3 (44-117)||(54451269-54451342)
chr3 (40-103)||(25991409-25991472)
chr3 (40-103)||(36986037-36986100)
chr3 (40-103)||(37011476-37011539)
chr3 (40-114)||(29644670-29644744)
chr3 (26-116)||(42342463-42342553)
chr3 (26-116)||(47964593-47964683)
chr3 (59-116)||(2299969-2300026)
chr3 (43-116)||(15773185-15773258)
chr3 (43-116)||(25739517-25739590)
chr3 (43-116)||(31190010-31190083)
chr3 (43-116)||(35946515-35946588)
chr3 (43-116)||(54017908-54017981)
chr3 (41-117)||(46546415-46546491)
chr3 (29-109)||(50612530-50612610)
chr3 (69-116)||(12747870-12747917)
chr3 (58-109)||(22304246-22304297)
chr3 (43-78)||(30399666-30399701)
chr3 (57-116)||(53577357-53577416)
chr3 (41-75)||(2417351-2417385)
chr3 (43-109)||(21832435-21832501)
chr3 (74-116)||(22304071-22304113)
chr3 (43-117)||(25317150-25317224)
chr3 (26-116)||(25755387-25755477)
chr3 (58-116)||(43346643-43346701)
chr3 (42-116)||(52634669-52634743)
chr3 (43-116)||(29644994-29645067)
chr3 (43-108)||(53118066-53118131)
chr3 (43-103)||(11661541-11661601)
chr3 (72-116)||(33809129-33809173)
[»] chr6 (27 HSPs)
chr6 (44-116)||(6071125-6071197)
chr6 (44-116)||(8481920-8481991)
chr6 (44-116)||(33605647-33605719)
chr6 (43-117)||(10911557-10911632)
chr6 (43-109)||(3409259-3409325)
chr6 (43-116)||(2579964-2580037)
chr6 (43-116)||(12092574-12092647)
chr6 (43-103)||(9062441-9062501)
chr6 (50-109)||(33605975-33606034)
chr6 (43-109)||(2378126-2378192)
chr6 (43-109)||(3409660-3409726)
chr6 (43-109)||(26544049-26544115)
chr6 (43-109)||(29518503-29518569)
chr6 (43-109)||(29518920-29518986)
chr6 (43-109)||(32741179-32741245)
chr6 (48-116)||(16454900-16454968)
chr6 (50-109)||(12071790-12071849)
chr6 (58-109)||(14748445-14748496)
chr6 (43-109)||(593801-593867)
chr6 (43-109)||(35210204-35210270)
chr6 (58-103)||(1950292-1950337)
chr6 (43-116)||(2578535-2578607)
chr6 (48-109)||(3058226-3058287)
chr6 (58-103)||(3415464-3415509)
chr6 (43-116)||(16108056-16108129)
chr6 (43-103)||(2377760-2377820)
chr6 (43-103)||(32460672-32460732)
[»] chr7 (32 HSPs)
chr7 (43-116)||(1085708-1085781)
chr7 (43-116)||(30245487-30245560)
chr7 (40-99)||(10341842-10341901)
chr7 (48-114)||(36622955-36623021)
chr7 (43-116)||(7517573-7517646)
chr7 (43-116)||(7554018-7554091)
chr7 (43-116)||(22566754-22566827)
chr7 (26-116)||(23452-23542)
chr7 (58-116)||(118408-118466)
chr7 (43-116)||(30255332-30255405)
chr7 (43-116)||(34218126-34218199)
chr7 (59-116)||(40094502-40094559)
chr7 (43-116)||(45434629-45434702)
chr7 (48-116)||(43241488-43241556)
chr7 (58-109)||(14681510-14681561)
chr7 (44-116)||(37345909-37345983)
chr7 (43-114)||(40230383-40230454)
chr7 (58-116)||(30244694-30244752)
chr7 (43-109)||(37533102-37533168)
chr7 (26-116)||(45433234-45433324)
chr7 (43-116)||(16569189-16569262)
chr7 (43-116)||(16596400-16596473)
chr7 (43-116)||(22567131-22567203)
chr7 (48-109)||(29157565-29157626)
chr7 (43-116)||(30244263-30244336)
chr7 (43-116)||(36109009-36109082)
chr7 (43-116)||(36534876-36534949)
chr7 (43-116)||(41910686-41910759)
chr7 (26-102)||(11845198-11845274)
chr7 (48-116)||(24177428-24177496)
chr7 (48-116)||(30245070-30245138)
chr7 (43-103)||(47129101-47129161)
[»] scaffold0113 (1 HSPs)
scaffold0113 (44-116)||(39831-39903)
[»] scaffold0702 (2 HSPs)
scaffold0702 (43-109)||(234-300)
scaffold0702 (43-103)||(606-666)
[»] scaffold0171 (1 HSPs)
scaffold0171 (58-116)||(17563-17621)
[»] scaffold0734 (2 HSPs)
scaffold0734 (43-116)||(5389-5462)
scaffold0734 (43-116)||(5770-5843)
[»] scaffold0391 (1 HSPs)
scaffold0391 (57-116)||(3091-3150)
[»] scaffold0078 (1 HSPs)
scaffold0078 (43-116)||(5350-5423)


Alignment Details
Target: chr1 (Bit Score: 465; Significance: 0; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 465; E-Value: 0
Query Start/End: Original strand, 16 - 585
Target Start/End: Complemental strand, 4878896 - 4878327
Alignment:
Q  16 ctagtgtgttcaatagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||||||| |||||||||||||||||||| |||||    
T  4878896 ctagtgtgttcaatagattcatgtgttctctcacttataaaatgttcaagcttcactattttatccgatgtggaacatataactcacaattgcacacaac 4878797  T
Q  116 atgaatttcataaataatattgtgatttctcagtggagtttagatttactaatttgccagttctaacatcattcatacttctctgatttctcttttttgt 215  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4878796 atgaatttcatcaataatattgtgatttctcagtggagtt-agatttactaatttgccagttctaacatcattcatacttctctgatttctcttttttgt 4878698  T
Q  216 tataagacatagcagttcaacaatcctactcctcaaaccttgcctctaagctgaatttgatgttaaaacttttgaggaaaaagaaactgttgtacaacac 315  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  4878697 tataagacatagcagttcaacaatcctaatcctcaaaccttgcctctaagctgaatttgattttaaaacttttgaggaaaaagaaactgttgtaaaacac 4878598  T
Q  316 acatcaactatagtttataactga-nnnnnnnnnnnnnnaaagattgacatgttttgtaaatagtacatatgttgcatataccctcataagctgtttatt 414  Q
    ||||||||||||||||||||||||               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4878597 acatcaactatagtttataactgatttttttttttttttaaagattgacatgttttgtaaatagtacatatgttgcatataccctcataagctgtttatt 4878498  T
Q  415 ggacacttaattccaatcataaataggtacatggaatcgagatcacggtagcggacaaaatattgaactagtatataagagtggatagaaaagaatacac 514  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4878497 ggaaacttaattccaatcataaataggtacatggaatcgagatcacggtagcgaacaaaatattgaactagtatataagagtggatagaaaagaatacac 4878398  T
Q  515 cggtacatgataaatgtattctagcattttgcaaatttgtgcatatgcagtttttggcttttgagaataat 585  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4878397 cggtacatgataaatgtattctagcattttgcaaatttgtgcatatgcagtttttggcttttgagaataat 4878327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 472 - 569
Target Start/End: Original strand, 12534044 - 12534141
Alignment:
Q  472 aaatattgaactagtatataagagtggatagaaaagaatacaccggtacatgataaatgtattctagcattttgcaaatttgtgcatatgcagttttt 569  Q
    |||||||||| |||||||||||| |||||| || ||||||  | ||| ||| |||||||||||| | ||||||||||||||||||||||||| |||||    
T  12534044 aaatattgaattagtatataagaatggataaaatagaatattctggtccataataaatgtattccaccattttgcaaatttgtgcatatgcacttttt 12534141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 1188681 - 1188753
Alignment:
Q  44 tctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||||||| |||||||||||||||| |||| ||| ||| |||||||||||||| ||||| ||||||    
T  1188681 tctcacttataaaatattcaacctccacttttctatccgatatggaacatataactcacacttgcacacaaca 1188753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 24600403 - 24600480
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacat 117  Q
    ||||||| |||||||| |||||||||||  |||||| |||| ||| |||||||||||||||||| ||||| |||||||    
T  24600403 gttctcttacttataatatgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaacat 24600480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 19283540 - 19283620
Alignment:
Q  36 atgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||| |||||| ||| ||| || ||||||||||||||| |||| | |||||||||||||||||||| ||||| ||||||    
T  19283540 atgtgtcctctcatttacaaagtgctcaacctccacttttctatccggtgtgggacatataactcacacttgcacacaaca 19283620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 37850689 - 37850765
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||| ||||||||  ||||||||||| ||| ||||||  |||||||||||||||||||||| ||||| ||||||    
T  37850689 gttctcttacttataaggtgttcaacctctactgttttatgcgatgtgggacatataactcacacttgcacacaaca 37850765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 1187457 - 1187527
Alignment:
Q  44 tctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaa 114  Q
    |||||||||||||||||| ||||||||||||| |||  |||||| ||||||||| ||||| ||||| ||||    
T  1187457 tctcacttataaaatgtttaacctccacttttatattcgatgtgagacatataattcacacttgcacacaa 1187527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 44290550 - 44290616
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| |||||||| |||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  44290550 ctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacacttgca 44290616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 50469180 - 50469246
Alignment:
Q  50 ttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||| ||||||||||  ||||| ||||||||||| |||||||||||||||| ||||| ||||||    
T  50469180 ttataaagtgttcaacctttactttattatctgatgtaggacatataactcacacttgcacacaaca 50469246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 3550786 - 3550721
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgc 108  Q
    |||| ||||||||  ||||||||||  ||| |||||||||||||||||||||||||||||| ||||    
T  3550786 ctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgc 3550721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 5320057 - 5320130
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||||  |||||||| |  |||||| |||| ||||||| |||||||||||||| ||||||||||||    
T  5320057 ctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatataactcacacttgcatacaaca 5320130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 17294643 - 17294570
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||| ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| | ||||||    
T  17294643 ctcttacttataaagtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaaca 17294570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 22793344 - 22793279
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgc 108  Q
    |||||||||||||| | ||||||||| |||||| |||  |||||||||||||||||||||| ||||    
T  22793344 ctctcacttataaagttttcaacctctacttttctatacgatgtgggacatataactcacacttgc 22793279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 34649500 - 34649431
Alignment:
Q  47 cacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| ||||||||    
T  34649500 cacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtatacaaca 34649431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 41157441 - 41157368
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  |||||||| |  ||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  41157441 ctcttacttataaggtgttcaacttttactcttttatctgatgtgggacatataactcacacttgcacacaaca 41157368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 41184517 - 41184590
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||| ||||||||||  ||| ||||||| |||||| ||||||||||||||| ||||| ||||||    
T  41184517 ctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaaca 41184590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 47379892 - 47379944
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcat 110  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  47379892 tgttcaacctccacttttctatccgatgtgggatatataactcacacttgcat 47379944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 50052115 - 50052175
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| |||||||| |||||||||||  ||| ||||||| ||||||||||||||||||||||    
T  50052115 ctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcaca 50052175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 50556519 - 50556451
Alignment:
Q  41 ttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||||||||||||||| |||||||||||| ||||| ||| ||||||| || ||||||| |||| |||||    
T  50556519 ttctctcacttataaattgttcaacctccgcttttctatatgatgtgtgatatataacccacacttgca 50556451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 24132092 - 24132151
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacat 117  Q
    ||||||||||  |||||| |||| |||| ||||||||||||||||| |||||||||||||    
T  24132092 tgttcaacctttacttttctatccgatgagggacatataactcacagttgcatacaacat 24132151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 3537239 - 3537305
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  3537239 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 3537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 32594808 - 32594874
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||||||||| |||||||||||||||| |||||    
T  32594808 ctcttacttataaggtgttcaacctttactattttatctgatgtaggacatataactcacacttgca 32594874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 35154162 - 35154204
Alignment:
Q  74 ttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||||||||||||||||||||| ||||| ||||||    
T  35154162 ttttatctgatgtgggacatataactcacacttgcacacaaca 35154204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 37556178 - 37556104
Alignment:
Q  43 ctctcacttataaaatgttcaacctccact-tttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||||||| |||||||||||  ||| |||||||| |||||||||||||||||||||| ||| | ||||||    
T  37556178 ctcttacttataagatgttcaacctttactatttttatccgatgtgggacatataactcacacttgtacacaaca 37556104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 44290917 - 44290983
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  44290917 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 44290983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 5996963 - 5997036
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||| ||||||||||||||| | |||||||| || || |||||||||||||||| |||  ||||| ||||||    
T  5996963 ctctcatttataaaatgttcaagcaccacttttctaacttatgtgggacatataacccacgcttgcacacaaca 5997036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 9955974 - 9955913
Alignment:
Q  43 ctctcacttataaaatgttcaacctccactttttt-atctgatgtgggacatataactcaca 103  Q
    |||| ||||||||  ||||||||||  |||||||| ||||||||||||||||||||||||||    
T  9955974 ctcttacttataatgtgttcaacctttactttttttatctgatgtgggacatataactcaca 9955913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 22077587 - 22077660
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  |||||| |||| |||||| ||||||||||||||| ||||| ||||||    
T  22077587 ctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataactcacacttgcacacaaca 22077660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 26661614 - 26661687
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||||  ||||||||||  ||| ||||| | |||||||||||||||||||||| ||| | ||||||    
T  26661614 ctctcacttataaggtgttcaacctttactcttttacccgatgtgggacatataactcacacttgtacacaaca 26661687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 29798265 - 29798192
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| |||||||  |||| |||||||||||||||| ||||||||||||    
T  29798265 ctcttacttataaggtgttcaacctttactattttatccaatgtaggacatataactcacacttgcatacaaca 29798192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 34364573 - 34364500
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||| ||||||||||||||| ||||| ||||||    
T  34364573 ctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaaca 34364500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 41142433 - 41142372
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  41142433 acttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgca 41142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 44091974 - 44091909
Alignment:
Q  29 tagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacata 94  Q
    |||||| ||| ||||||||||||||||| ||||||||||  ||||||  |||||||||| ||||||    
T  44091974 tagatttatgggttctctcacttataaagtgttcaacctttacttttacatctgatgtgtgacata 44091909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 26661991 - 26662063
Alignment:
Q  44 tctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||||  ||||||||||  ||| ||||||||||| ||||| |||||||||||| ||| | ||||||    
T  26661991 tctcacttataaggtgttcaacctttactcttttatctgatatgggatatataactcacacttgtacacaaca 26662063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 10351229 - 10351182
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtg 87  Q
    ||||||||||||||||| ||||||||||| | |||| |||||||||||    
T  10351229 gttctctcacttataaagtgttcaacctctatttttctatctgatgtg 10351182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 45084448 - 45084382
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||||||||| |||||||||||| |||||    
T  45084448 ctcttacttataaggtgttcaacctttactgttttatccgatgtgggagatataactcacacttgca 45084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 66564 - 66637
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  |||||| |||| ||| ||| |||||||||||||| ||||| ||||||    
T  66564 ctcttacttataaggtgttcaacctttacttttctatccgatatggaacatataactcacacttgcacacaaca 66637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 24448343 - 24448270
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||||||||||||||| ||||||||| | |  |||||   |||||||||| ||| ||||| ||||||    
T  24448343 ctctcacttataaaatgttcaacttccacttttctttgagatgtctaacatataacttacacttgcacacaaca 24448270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 34364991 - 34364918
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  | | ||||||| |||||| ||||||||||||||| ||||| ||||||    
T  34364991 ctcttacttataaggtgttcaacctttattattttatccgatgtgtgacatataactcacacttgcacacaaca 34364918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 40082473 - 40082408
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgc 108  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||||| |||||||||||||||| ||||    
T  40082473 ctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgc 40082408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 22077243 - 22077287
Alignment:
Q  72 ttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||| |||||||||||||||||||||| ||||| ||||||    
T  22077243 ttttctatccgatgtgggacatataactcacacttgcacacaaca 22077287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 35530398 - 35530466
Alignment:
Q  35 catgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    ||||||| |||| || |||||||||||||||||  | ||||||||  || |||||||||||||| ||||    
T  35530398 catgtgtcctcttacatataaaatgttcaaccttaatttttttattcgacgtgggacatataacacaca 35530466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 37555796 - 37555736
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| ||||||||  | |||||||| |||| ||||||| |||||||||| |||||||||||    
T  37555796 ctcttacttataatgtattcaaccttcactattttatccgatgtgggacttataactcaca 37555736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 50081150 - 50081182
Alignment:
Q  44 tctcacttataaaatgttcaacctccacttttt 76  Q
    |||||||||||||||||||| ||||||||||||    
T  50081150 tctcacttataaaatgttcagcctccacttttt 50081182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 3e-22; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 4154371 - 4154445
Alignment:
Q  42 tctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||||    
T  4154371 tctctcacttataaagtgttcaacctccacttttctatctgatgtaggacatataactcacatttgcacacaaca 4154445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 20995502 - 20995569
Alignment:
Q  52 ataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacatga 119  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||    
T  20995502 ataaagtgttcaacctccacttttttatctgatgtgagacatataactcacacttgcacacaacatga 20995569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 4154761 - 4154831
Alignment:
Q  46 tcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| ||||| ||||||    
T  4154761 tcacttataaagtgttcaacctccacttttctatcagatgtgggacatataactcacacttgcacacaaca 4154831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 9620768 - 9620843
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacatg 118  Q
    |||||||||||||| || ||||| || |||||| |||||| |||| ||||||||||||||| ||||| ||||||||    
T  9620768 ctctcacttataaagtgatcaacttctacttttctatctgttgtgagacatataactcacacttgcacacaacatg 9620843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 41972221 - 41972150
Alignment:
Q  46 tcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacat 117  Q
    ||||||||||  ||||||||||  |||||| |||| |||||||||||||||||||||| ||||| |||||||    
T  41972221 tcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacacaacat 41972150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 3669753 - 3669687
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| |||||||||||||||||||||||||||||| |||||    
T  3669753 ctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgca 3669687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 3038387 - 3038455
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||| ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| | ||||||    
T  3038387 acttataaagtgttcaacctttactattttatccgatgtgggacatataactcacacttgtacacaaca 3038455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 8918838 - 8918929
Alignment:
Q  25 tcaatagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||| || ||| || |||| ||||||||| ||||||||||  ||| |  ||||||||||||||||| ||||||||| ||||| ||||||    
T  8918838 tcaataggtttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactcacacttgcacacaaca 8918929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 147868 - 147822
Alignment:
Q  70 acttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  147868 acttttttatcagatgtgggacatataactcacacttgcacacaaca 147822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 45122002 - 45122068
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||| ||||||||||  ||| ||||||  |||||||||||||||||||||| |||||    
T  45122002 ctcttacttataaagtgttcaacctttactattttatgcgatgtgggacatataactcacacttgca 45122068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 45122146 - 45122220
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaa 114  Q
    ||||||| ||||||||  ||||||||||  ||| ||||||| |||||| ||||||||||||||| ||||| ||||    
T  45122146 gttctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaa 45122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 5420717 - 5420644
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||||||| |||||||||||  ||| || |||| ||||||||||||||||  |||| ||||||||||||    
T  5420717 ctcttacttataagatgttcaacctttactattctatccgatgtgggacatataatacacacttgcatacaaca 5420644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 9309421 - 9309348
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  |||||||| |  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  9309421 ctcttacttataaggtgttcaacatttactcttttatccgatgtgggacatataactcacacttgcacacaaca 9309348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 40518633 - 40518588
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||    
T  40518633 tgttcaacctttacttttctatctgatgtgggacatataactcaca 40518588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 44358163 - 44358212
Alignment:
Q  44 tctcacttataaaatgttcaacctccacttttttatctgatgtgggacat 93  Q
    |||||||||||||||| ||||| | ||||||||||||||||||| |||||    
T  44358163 tctcacttataaaatggtcaacattcacttttttatctgatgtgagacat 44358212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 9309045 - 9308970
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtg--ggacatataactcacaattgcatacaaca 116  Q
    |||| |||||||| ||||||||| |  ||| ||||||||||||||  |||||||||||||||| ||||| ||||||    
T  9309045 ctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactcacacttgcacacaaca 9308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 9608806 - 9608738
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||  ||||||||||  |||||| |||| ||| |||||||||||||||||| ||||| ||||||    
T  9608806 acttataaggtgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 9608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 70366 - 70425
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcac 102  Q
    |||| |||||||| ||||||||| |  ||| ||||||| |||||||||||||||||||||    
T  70366 ctcttacttataagatgttcaacatttactcttttatccgatgtgggacatataactcac 70425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 6876969 - 6877028
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggac-atataactcacaattgcatacaaca 116  Q
    ||||||||||  ||||||||||| |||||||||| |||||||||||| ||||| ||||||    
T  6876969 tgttcaacctttacttttttatccgatgtgggactatataactcacacttgcacacaaca 6877028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 34835275 - 34835216
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcac 102  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||    
T  34835275 ctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactcac 34835216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 41416263 - 41416322
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcac 102  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||    
T  41416263 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 1014337 - 1014403
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| |||||||||||||  ||||||||||||||| |||||    
T  1014337 ctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactcacacttgca 1014403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 147502 - 147457
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    ||||||||||  ||| ||||||| ||||||||||||||||||||||    
T  147502 tgttcaacctttactcttttatccgatgtgggacatataactcaca 147457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 3670121 - 3670060
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    ||||||||  |||| |||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  3670121 acttataaggtgttaaacctttactattttatccgatgtgggacatataactcacacttgca 3670060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 6731953 - 6731904
Alignment:
Q  60 ttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    ||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  6731953 ttcaacctttactattttatccgatgtgggacatataactcacacttgca 6731904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 12283912 - 12283867
Alignment:
Q  70 acttttttatctgatgtgggacatataactcacaattgcatacaac 115  Q
    |||||||||||||| ||||||||||||||| ||| ||||| |||||    
T  12283912 acttttttatctgacgtgggacatataacttacacttgcacacaac 12283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 20870665 - 20870718
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatata 96  Q
    |||| |||||||| |||||||||||  ||| ||||||||||||||| |||||||    
T  20870665 ctcttacttataagatgttcaacctttactattttatctgatgtggaacatata 20870718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 25561908 - 25561981
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  |||||||| |  ||| ||||||| |||||||||||||||||||||| ||| | ||||||    
T  25561908 ctcttacttataaggtgttcaacgtttactcttttatccgatgtgggacatataactcacacttgtagacaaca 25561981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 30359675 - 30359602
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  |||||||| |  ||| |||||||||||||| ||||||||||||||| ||| | ||||||    
T  30359675 ctcttacttataaggtgttcaacttttactcttttatctgatgtgagacatataactcacacttgtacacaaca 30359602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 43274854 - 43274931
Alignment:
Q  26 caatagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||||| || ||| || |||| |||||||| || ||||||||  ||| ||||||||||||||  ||||||||||||||    
T  43274854 caataggtttatgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatataactcaca 43274931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 18372791 - 18372851
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||| |||||||||||||||    
T  18372791 ctcttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactcaca 18372851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 25561736 - 25561792
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataact 99  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||||||||||||||||||    
T  25561736 ctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataact 25561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 11348418 - 11348491
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||||||    
T  11348418 ctctcacttataaagtgttcaacctccactattttatctgatgtagaacatataactcacaattgcacacaaca 11348491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 28034298 - 28034222
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||||||||| |||||||||||||||||| |||| |||| ||||||||||| ||||| ||||| ||||||    
T  28034298 gttctctcacttataaagtgttcaacctccacttttctatccgatgcgggacatataattcacacttgcacacaaca 28034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 15841074 - 15841134
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| |||||    
T  15841074 ctctcacttataaaatgttcagcctccacttttctatctgatatgggacatataattcaca 15841134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 1731744 - 1731810
Alignment:
Q  50 ttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||| |||||||||||  ||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  1731744 ttataagatgttcaacctttactgttttatctgatgtgggacatataactcacatttgcacacaaca 1731810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 44620726 - 44620654
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaac 115  Q
    |||| ||||||||| ||||||||||| ||| ||| ||| |||||||||||||||||||||| ||||| |||||    
T  44620726 ctcttacttataaagtgttcaacctctactatttcatccgatgtgggacatataactcacacttgcacacaac 44620654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 54017685 - 54017751
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| |||||||| |||||||||||  ||| |||||||||| ||||||||||||||||||| |||||    
T  54017685 ctcttacttataagatgttcaacctttactattttatctgacgtgggacatataactcacacttgca 54017751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 3244541 - 3244614
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||||||| |||||||||||  |||||| |||| |||||| ||||||||||||||| ||||| ||||||    
T  3244541 ctcttacttataagatgttcaacctttacttttctatccgatgtgagacatataactcacacttgcacacaaca 3244614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 25483402 - 25483329
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||||||| |||||||||||  ||| ||||||| |||||| ||||||||||||||| ||||| ||||||    
T  25483402 ctcttacttataagatgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaaca 25483329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 49302963 - 49302910
Alignment:
Q  50 ttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||||| |||||||||||  |||||||||| |||||||||||||||||||||||    
T  49302963 ttataagatgttcaacctttacttttttatttgatgtgggacatataactcaca 49302910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 52884953 - 52884880
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  52884953 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 52884880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 52884756 - 52884688
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  52884756 acttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 52884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 2740766 - 2740692
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacat 117  Q
    |||| ||||||||  ||||||||||  ||| || |||| |||||||||||||||||||||| ||||| |||||||    
T  2740766 ctcttacttataaggtgttcaacctttactgttctatccgatgtgggacatataactcacacttgcacacaacat 2740692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 50002509 - 50002419
Alignment:
Q  26 caatagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||| ||| || |||| ||||| ||| ||||||||||  ||| ||||||| |||||| ||||||||||||||| ||||| ||||||    
T  50002509 caatggatttatgggtcctcttacttaaaaagtgttcaacctttactcttttatccgatgtgagacatataactcacacttgcaaacaaca 50002419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 3341194 - 3341121
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||| |||| |||||  ||| |||||||  ||||||||||||||||||||| ||||| ||||||    
T  3341194 ctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatataactcacacttgcacacaaca 3341121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 4390191 - 4390264
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||||||||||||| || ||||||||| ||||| ||||||    
T  4390191 ctcttacttataaggtgttcaacctttactcttttatctgatgtgggatatgtaactcacacttgcacacaaca 4390264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 10245986 - 10245913
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||| ||||||||||||| ||||| ||||||    
T  10245986 ctcttacttataaggtgttcaacctttactcttttatccgatgtggggcatataactcacacttgcacacaaca 10245913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 39404464 - 39404391
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||| ||||  ||| |||||||||||||||||||||||||||||| ||| | ||||||    
T  39404464 ctcttacttataaggtgttccacctttactcttttatctgatgtgggacatataactcacacttgtacacaaca 39404391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 12197447 - 12197371
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||| || |||||||| | || ||||| ||||||| ||| ||||||||||| ||||||||||| ||||| ||||||    
T  12197447 gttctttcgcttataaagtattgaaccttcacttttctatttgatgtgggacctataactcacacttgcacacaaca 12197371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 15841458 - 15841510
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatat 95  Q
    |||||||||| ||| |||||||||||||||||| ||| ||||||| |||||||    
T  15841458 ctctcacttacaaagtgttcaacctccacttttctatttgatgtgagacatat 15841510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 16888903 - 16888971
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgc 108  Q
    ||||||| ||||||||  | ||||||||  |||||| |||| |||||||||||||||||||||| ||||    
T  16888903 gttctcttacttataaggtattcaacctttacttttctatccgatgtgggacatataactcacacttgc 16888971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 22183359 - 22183427
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||| |||||||| |  ||| ||||||| ||||||||| |||||||||||| ||||| ||||||    
T  22183359 acttataaattgttcaacatttactcttttatccgatgtgggatatataactcacacttgcacacaaca 22183427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 23556954 - 23557022
Alignment:
Q  41 ttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||||| | |||||||||||||||||||||||||| |||| |||||   |||| ||||||||| |||||    
T  23556954 ttctcttatttataaaatgttcaacctccacttttctatccgatgtaaaacatttaactcacacttgca 23557022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 20826286 - 20826223
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    ||||||| ||||||||  |||||||| |  ||| ||||||| ||||||||||||||||||||||    
T  20826286 gttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatataactcaca 20826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 39792956 - 39793023
Alignment:
Q  49 cttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||  |||||||| |  |||||| ||||||||||||||||||||||||||| ||| | ||||||    
T  39792956 cttataaggtgttcaacatttacttttctatctgatgtgggacatataactcacacttgtacacaaca 39793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 2741137 - 2741071
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  | ||||||||  ||| || ||||||||||||||||||||||||||| |||||    
T  2741137 ctcttacttataaggtattcaacctttactattctatctgatgtgggacatataactcacacttgca 2741071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 6975546 - 6975612
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| |||||||| || ||||||||  ||| ||||||| |||||| ||||||||||||||| |||||    
T  6975546 ctcttacttataagatattcaacctttactattttatcggatgtgagacatataactcacatttgca 6975612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 78
Target Start/End: Original strand, 39099845 - 39099879
Alignment:
Q  44 tctcacttataaaatgttcaacctccactttttta 78  Q
    ||||| |||||||||||||||||||||||||||||    
T  39099845 tctcagttataaaatgttcaacctccactttttta 39099879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 41707569 - 41707627
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| | ||||||    
T  41707569 tgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaaca 41707627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 4955407 - 4955480
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||| || ||||||||||||||| ||||| ||||||    
T  4955407 ctcttacttataaggtgttcaaccttaactattttatccgatatgagacatataactcacacttgcacacaaca 4955480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 43174580 - 43174499
Alignment:
Q  36 atgtgttctctcacttataaaatgttcaacctccact-tttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||| |||| ||||||||  ||||||||||  ||| ||||||||||||||| | ||||||||||||| ||| | ||||||    
T  43174580 atgtgtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtggcatataactcacacttgtacacaaca 43174499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 49076538 - 49076611
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||| ||| |||||||||||||| ||||| ||||||    
T  49076538 ctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaaca 49076611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 760255 - 760195
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||||||||||||| |  ||||||| || |||| |||  ||||||||||||||||||||||    
T  760255 ctctcacttataaagttctcaaccttcatttttctattcgatgtgggacatataactcaca 760195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 3700426 - 3700358
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||  |||||||| |  ||| ||||||| ||||| |||||||||||||||| ||||| ||||||    
T  3700426 acttataaggtgttcaacatttactcttttatccgatgtaggacatataactcacacttgcacacaaca 3700358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 50459787 - 50459727
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| |||||||| |||||||||||  ||| ||||| | ||||||| ||||||||||||||    
T  50459787 ctcttacttataagatgttcaacctttactcttttaaccgatgtggaacatataactcaca 50459727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 54343091 - 54343147
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataact 99  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||||||||||||||||||    
T  54343091 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 6e-20; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 33561543 - 33561617
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacat 117  Q
    |||||||||||||| |||| ||||||||||||| |||||||||||| |||||||||||||| ||||| |||||||    
T  33561543 ctctcacttataaagtgtttaacctccacttttctatctgatgtggaacatataactcacacttgcacacaacat 33561617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 33953863 - 33953936
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||| | |||||||||||||||||| ||||||||||||||| ||||||||||| ||||| ||||||    
T  33953863 ctctcacttatatagtgttcaacctccacttttctatctgatgtgggacttataactcacatttgcacacaaca 33953936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 962664 - 962590
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacat 117  Q
    |||||||||||||  ||||||||||  |||||| |||| |||||||||||||||||||||| |||||||||||||    
T  962664 ctctcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcatacaacat 962590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 29873633 - 29873702
Alignment:
Q  47 cacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||  ||||| ||||||    
T  29873633 cacttataaaatgttcaacctccacttttctatctgatgtgggacatgtaacacacccttgcacacaaca 29873702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 7598675 - 7598609
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  |||||||||||||||||||||||||||||||||| |||||    
T  7598675 ctcttacttataaggtgttcaacctttacttttttatctgatgtgggacatataactcacacttgca 7598609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 33954360 - 33954426
Alignment:
Q  50 ttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||| |||||| |||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  33954360 ttatataatgtttaacctcaacttttctatctgatgtgggacatataactcacacttgcacacaaca 33954426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 29874122 - 29874175
Alignment:
Q  50 ttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||| ||||    
T  29874122 ttataaagtgttcaacctccacttttctatctgatgtgggacatataacacaca 29874175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 30323530 - 30323457
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||| |||| ||||||||||||| |||| |||||||| ||||||||||||| |||| ||||| ||||||    
T  30323530 ctctcacttctaaagtgttcaacctccaattttctatctgatttgggacatataacacacacttgcacacaaca 30323457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 42514715 - 42514642
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  |||||| |||||||||| |||||||||||||||| ||||||||||||    
T  42514715 ctcttacttataaggtgttcaacctttacttttctatctgatgtaggacatataactcacacttgcatacaaca 42514642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 40733583 - 40733523
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| ||||||||  |||||||| |  ||||||||||||||||||||||||||||||||||    
T  40733583 ctcttacttataaggtgttcaacatttacttttttatctgatgtgggacatataactcaca 40733523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 41678459 - 41678534
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggac--atataactcacaattgcatacaaca 116  Q
    |||||||||||||| |||| ||||||| ||||| ||||||||||| |||  |||||||||||| ||||| ||||||    
T  41678459 ctctcacttataaagtgtttaacctccccttttctatctgatgtgagacatatataactcacacttgcacacaaca 41678534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 31468844 - 31468911
Alignment:
Q  49 cttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||| || ||||||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  31468844 cttataagatattcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 31468911  T

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Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 5543090 - 5543156
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  5543090 ctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactcacacttgca 5543156  T

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Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 36178697 - 36178763
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  36178697 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 36178763  T

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Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 36785670 - 36785728
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  36785670 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 36785728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 37106254 - 37106188
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  37106254 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 37106188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 16590925 - 16590880
Alignment:
Q  72 ttttttatctgatgtgggacatataactcacaattgcatacaacat 117  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||||    
T  16590925 ttttttatttgatgtgggacatataactcacacttgcacacaacat 16590880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 28254329 - 28254402
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||||||| |||||||||||  |||||| |||| |||||||||||||||| ||||| | ||| ||||||    
T  28254329 ctcttacttataagatgttcaacctttacttttctatccgatgtgggacatataagtcacactggcacacaaca 28254402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 28531406 - 28531479
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||   ||||| |||| |||||||||||||||||||||| ||||| ||||||    
T  28531406 ctcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataactcacacttgcacacaaca 28531479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 30313243 - 30313171
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||||  |||||||||||||||||| |||| |||||| |||||||||| |||  ||||| ||||||    
T  30313243 ctctcacttataag-tgttcaacctccacttttctatccgatgtgagacatataacacacgcttgcacacaaca 30313171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 37632689 - 37632762
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||||||||||||  |||||  ||| ||||||| ||||| |||||||||||||||| ||||| ||||||    
T  37632689 ctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactcacacttgcacacaaca 37632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 38796310 - 38796383
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  |||||||| |  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  38796310 ctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaaca 38796383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 38796712 - 38796785
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  | | ||||||| |||||||||||||||||||||| ||||| ||||||    
T  38796712 ctcttacttataaggtgttcaacctttattgttttatcagatgtgggacatataactcacacttgcacacaaca 38796785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 6421451 - 6421391
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||||||||||||||||||||||    
T  6421451 ctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcaca 6421391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 40679718 - 40679794
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||| ||||||||  |||||||||   |||||| |||| ||| |||||||||||||||||| ||||| ||||||    
T  40679718 gttctcttacttataaggtgttcaacccttacttttctatccgatatgggacatataactcacatttgcacacaaca 40679794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 35580815 - 35580886
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaa 114  Q
    |||||||||||||  |||||||| |  | | ||||||| |||||||||||||||||||||| ||||| ||||    
T  35580815 ctctcacttataaggtgttcaacatttattgttttatccgatgtgggacatataactcacacttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 6713059 - 6712969
Alignment:
Q  26 caatagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||| || ||| || |||| ||||||||  |||||||| |  ||| ||||||| |||||| ||||||||||||||| ||| ||||||||    
T  6713059 caataggtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgagacatataactcacacttgtatacaaca 6712969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 12529151 - 12529193
Alignment:
Q  74 ttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||| |||||| |||||||||||||||| ||||||||||||    
T  12529151 ttttatttgatgtaggacatataactcacacttgcatacaaca 12529193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 14745759 - 14745825
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| |||||||  ||||||||||||||||||||| |||||    
T  14745759 ctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacacttgca 14745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 16542500 - 16542442
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||  ||| ||||||| |||||||||| ||||||||||| ||||| ||||||    
T  16542500 tgttcaacctttactattttatccgatgtgggacttataactcacacttgcacacaaca 16542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 41283567 - 41283633
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||| |||||||||||||||||| |||||    
T  41283567 ctcttacttataaggtgttcaacctttactattttatccgatatgggacatataactcacacttgca 41283633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 15880329 - 15880256
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||||||| |||||||||||||| ||| | ||||||    
T  15880329 ctcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacacttgtacacaaca 15880256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 29676969 - 29676896
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||| |||||  |||| |||||  ||| ||||||| ||||||||||||||||||||||  |||| ||||||    
T  29676969 ctctcacctataaggtgttaaacctttactcttttatccgatgtgggacatataactcacacctgcacacaaca 29676896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 37105985 - 37105924
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    ||||||||  ||||||||||  ||| ||||||  |||||||||||||||||||||| |||||    
T  37105985 acttataaggtgttcaacctttactattttattcgatgtgggacatataactcacacttgca 37105924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 2336690 - 2336658
Alignment:
Q  43 ctctcacttataaaatgttcaacctccactttt 75  Q
    |||||||||||||| ||||||||||||||||||    
T  2336690 ctctcacttataaagtgttcaacctccactttt 2336658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 34481334 - 34481274
Alignment:
Q  41 ttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactca 101  Q
    |||| ||| ||||||||| |||||||||||||||| |||| || ||| || ||||||||||    
T  34481334 ttctatcatttataaaatattcaacctccacttttatatccgacgtgagaaatataactca 34481274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 43443103 - 43443147
Alignment:
Q  72 ttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||||||||||||||||| ||| ||||| ||||||    
T  43443103 ttttctatctgatgtgggacatataacttacacttgcacacaaca 43443147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 12662727 - 12662817
Alignment:
Q  26 caatagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||| ||| ||| ||| ||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  12662727 caatggatttatgggttttcttacttataaaatgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 12662817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 31509689 - 31509616
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||||| || ||||||||||||||| |||| |||||| ||||||||||||||| ||||| ||||||    
T  31509689 ctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatataactcacacttgcacacaaca 31509616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 36522329 - 36522402
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||||||||||||||| |||| |||| ||||  ||||| ||||||||||||||| || |||||||||    
T  36522329 ctctcacttataaaatgttcaacttccatttttctatccaatgtgagacatataactcacactttcatacaaca 36522402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 41170700 - 41170637
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaatt 106  Q
    |||| |||||||| |||||||||||  ||| ||||||| |||||||||||||||||||||||||    
T  41170700 ctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacaatt 41170637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 36522003 - 36522053
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgc 108  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  36522003 tgttcaacctcaacttttctatctgatgtgggacatataactcacacttgc 36522053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 15370165 - 15370092
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||||||| |||||||||||  ||| ||||||  |||||||||||||||||||||| ||||| ||||||    
T  15370165 ctcttacttataagatgttcaacctttactattttattcgatgtgggacatataactcacacttgcacacaaca 15370092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 36492309 - 36492382
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  36492309 ctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcaaacaaca 36492382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 18603212 - 18603272
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| ||||||||  ||||||||||  ||| ||||||||||||||||||||||||||||||    
T  18603212 ctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcaca 18603272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 35150074 - 35150002
Alignment:
Q  42 tctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaa 114  Q
    ||||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||    
T  35150074 tctcttacttataaggtgttcaaccttgactcttttatccgatgtgggacatataactcacacttgcacacaa 35150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 36568660 - 36568732
Alignment:
Q  44 tctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||||  |||||||| |  |||||| |||| |||||||||||||||||||||| ||||| ||||||    
T  36568660 tctcacttataaggtgttcaacttttacttttctatccgatgtgggacatataactcacacttgcacacaaca 36568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 26074253 - 26074311
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||  ||||||||||| |||||| ||||||||||||||| ||||| ||||||    
T  26074253 tgttcaacctttacttttttatccgatgtgtgacatataactcacacttgcacacaaca 26074311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 1028609 - 1028682
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||| |||||| |||  |||||| |||| |||||||||||||||||||||| ||| | ||||||    
T  1028609 ctcttacttataaagtgttcatcctttacttttctatccgatgtgggacatataactcacacttgtacacaaca 1028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 13415852 - 13415925
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  |||  |||||| |||||||||||||||||||||| ||||| ||||||    
T  13415852 ctcttacttataaggtgttcaacctttactaatttatccgatgtgggacatataactcacacttgcacacaaca 13415925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 35914910 - 35914857
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactca 101  Q
    ||||||||||||||||||||  ||| ||||||| |||||| |||||||||||||    
T  35914910 acttataaaatgttcaacctttactcttttatccgatgtgtgacatataactca 35914857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 36527199 - 36527248
Alignment:
Q  67 tccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||| ||||||||||||||||||||||||||| ||| | ||||||    
T  36527199 tccacttttctatctgatgtgggacatataactcacacttgtacacaaca 36527248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 299550 - 299490
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgc 108  Q
    ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| ||||    
T  299550 acttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgc 299490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 31509797 - 31509745
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatat 95  Q
    |||||||||||||| || ||||||||||||||| |||| |||||| |||||||    
T  31509797 ctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatat 31509745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 32487445 - 32487394
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  32487445 tgttcaacctttactattttatccgatgtgggacatataactcacacttgca 32487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 38427609 - 38427554
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||||||| |||||||||||  |||||| ||||  |||||||||||||||||||||    
T  38427609 acttataagatgttcaacctttacttttctatccaatgtgggacatataactcaca 38427554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 301027 - 300965
Alignment:
Q  41 ttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||||| ||||||||  | ||||||||  ||| ||||||||||||||||||||||||| ||||    
T  301027 ttctcttacttataaggtattcaacctttactgttttatctgatgtgggacatataacccaca 300965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 9498746 - 9498812
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| || ||||||||||| ||||||||||||||| |||||    
T  9498746 ctcttacttataaggtgttcaacctttactattctatctgatgtgagacatataactcacatttgca 9498812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 26074889 - 26074947
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| | ||||||    
T  26074889 tgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaaca 26074947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 40296407 - 40296473
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||   || ||||||| |||||||||||||||||||||| |||||    
T  40296407 ctcttacttataaggtgttcaaccttttctattttatccgatgtgggacatataactcacacttgca 40296473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 6224262 - 6224189
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| || ||||||||||||||||||| ||| | ||||||    
T  6224262 ctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactcacacttgtacacaaca 6224189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 24489324 - 24489369
Alignment:
Q  71 cttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||| ||||||||||||||||||||||||||| ||| | ||||||    
T  24489324 cttttctatctgatgtgggacatataactcacacttgaacacaaca 24489369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 41632848 - 41632775
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  |||||| |||| |||||| ||||||||||| ||| ||||| ||||||    
T  41632848 ctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataacttacacttgcacacaaca 41632775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 26074384 - 26074324
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| ||||||||  ||||||| ||  | |||| |||||||||||||||||||||||||||    
T  26074384 ctcttacttataaggtgttcaatctttagttttctatctgatgtgggacatataactcaca 26074324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 6e-17; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 8327973 - 8327888
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacatgaatttca 125  Q
    ||||||| |||||||| || |||| |||  ||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||||    
T  8327973 gttctcttacttataagatattcatcctttactcttttatccgatgtgggacatataactcacacttgcacacaacatgaatttca 8327888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 39336321 - 39336392
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaa 114  Q
    |||||||||||||| |||||||||||||  ||| |||| |||||||||||||||||||||| ||||| ||||    
T  39336321 ctctcacttataaagtgttcaacctccaactttctatccgatgtgggacatataactcacacttgcacacaa 39336392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 43346880 - 43346956
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||| ||||||||  ||||||||||  ||| |||||||||||||||||||||||||||||| ||| | ||||||    
T  43346880 gttctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgtacacaaca 43346956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 33803359 - 33803418
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacat 117  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  33803359 tgttcaacctttactattttatccgatgtgggacatataactcacaattgcacacaacat 33803418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 39914303 - 39914245
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||||| ||||| ||||||    
T  39914303 tgttcaacctctactgttttatctgatgtgagacatataactcacacttgcacacaaca 39914245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 33175753 - 33175830
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacat 117  Q
    ||||||| ||||||||  ||||||||||  |||||| ||||||||||| ||||||||||||||| ||| | |||||||    
T  33175753 gttctcttacttataaggtgttcaacctttacttttctatctgatgtgagacatataactcacacttgtacacaacat 33175830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 47965007 - 47965080
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||| |||||| ||||||||||||| |||| |||||   |||||||||||||| ||||| ||||||    
T  47965007 ctctcacttatataatgtttaacctccacttttctatccgatgtaaaacatataactcacacttgcacacaaca 47965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 54451269 - 54451342
Alignment:
Q  44 tctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacat 117  Q
    ||||||| ||||| ||||||||||||| |||| | | |||||||||||||||||||||||  |||| |||||||    
T  54451269 tctcactcataaagtgttcaacctccatttttctttttgatgtgggacatataactcacatatgcacacaacat 54451342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 25991472 - 25991409
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||||||||||||||||||||| ||| |  |||| ||||| ||||||||||||||| |||||||    
T  25991472 gttctctcacttataaaatgtttaacattaacttgtttatttgatgtgggacatattactcaca 25991409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 36986037 - 36986100
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    ||||||||||||||||| |  ||||||| ||||||| |||  ||||||||||||||||||||||    
T  36986037 gttctctcacttataaagttctcaaccttcacttttctattcgatgtgggacatataactcaca 36986100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 37011476 - 37011539
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    ||||||||||||||||| |  ||||||| ||||||| |||  ||||||||||||||||||||||    
T  37011476 gttctctcacttataaagttctcaaccttcacttttctattcgatgtgggacatataactcaca 37011539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 29644670 - 29644744
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaa 114  Q
    ||||||| ||||||||  ||||||||||  ||| ||| ||| |||||||||||||||||||||| ||||| ||||    
T  29644670 gttctcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactcacacttgcacacaa 29644744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 42342463 - 42342553
Alignment:
Q  26 caatagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||| ||| || |||| ||||||||  |||| |||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  42342463 caatggatttatgggtcctcttacttataaggtgttgaacctttactcttttatcggatgtgggacatataactcacacttgcacacaaca 42342553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 47964593 - 47964683
Alignment:
Q  26 caatagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||| || ||| || |||||||||||| |  ||||||||||||| ||| |||| |||| |||||||| |||||||| ||||| ||||||    
T  47964593 caataggtttatgggtcctctcacttatatagcgttcaacctccacatttctatccgatgcgggacatacaactcacacttgcacacaaca 47964683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 2300026 - 2299969
Alignment:
Q  59 gttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||||||||||| ||||||| |||||||||||||| |||| ||||| ||||||    
T  2300026 gttctacctccacttttctatctgacgtgggacatataacccacacttgcacacaaca 2299969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 15773258 - 15773185
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||||||| ||||||||| |  ||| ||||||  |||||||||||||||||||||| ||||| ||||||    
T  15773258 ctcttacttataagatgttcaacttttactcttttattcgatgtgggacatataactcacacttgcacacaaca 15773185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 25739517 - 25739590
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||||||  ||||||||| |  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  25739517 ctcttacttatatgatgttcaacttttactattttatccgatgtgggacatataactcacacttgcacacaaca 25739590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 31190083 - 31190010
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||| ||||||| ||||| ||||||    
T  31190083 ctctaacttataaggtgttcaacctttactcttttatccgatgtgggacatatcactcacacttgcacacaaca 31190010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 35946588 - 35946515
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| | ||||||    
T  35946588 ctcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgtacacaaca 35946515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 54017908 - 54017981
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||||| |||||||||||||||| ||||| ||||||    
T  54017908 ctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 54017981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 46546415 - 46546491
Alignment:
Q  41 ttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacat 117  Q
    |||||| ||||||||| |||||||||||||| |||  |||  |||| |||||||||||||||| || || |||||||    
T  46546415 ttctctaacttataaagtgttcaacctccacatttcaatccaatgtaggacatataactcacacttacacacaacat 46546491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 50612530 - 50612610
Alignment:
Q  29 tagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||||| ||| || |||| ||||||||  ||||||| ||  ||| ||||||| |||||||||||||||||||||| |||||    
T  50612530 tagatttatgagtcctcttacttataaggtgttcaatctttactattttatccgatgtgggacatataactcacacttgca 50612610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 12747870 - 12747917
Alignment:
Q  69 cacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||| |||| |||||||||||||||||||||| ||||| ||||||    
T  12747870 cacttttctatccgatgtgggacatataactcacacttgcacacaaca 12747917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 22304297 - 22304246
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  22304297 tgttcaacctttactattttatccgatgtgggacatataactcacacttgca 22304246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 78
Target Start/End: Original strand, 30399666 - 30399701
Alignment:
Q  43 ctctcacttataaaatgttcaacctccactttttta 78  Q
    |||||||||||||||||||||||||||| |||||||    
T  30399666 ctctcacttataaaatgttcaacctccaatttttta 30399701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 53577416 - 53577357
Alignment:
Q  57 atgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||  ||| ||||||| |||||| ||||||||||||||| ||||| ||||||    
T  53577416 atgttcaacctttactgttttatccgatgtgtgacatataactcacacttgcacacaaca 53577357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 2417385 - 2417351
Alignment:
Q  41 ttctctcacttataaaatgttcaacctccactttt 75  Q
    |||||||||||||||||||||||| ||||||||||    
T  2417385 ttctctcacttataaaatgttcaatctccactttt 2417351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 21832435 - 21832501
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  |||||| ||||  ||||||||||||||||||||| |||||    
T  21832435 ctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactcacacttgca 21832501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 22304071 - 22304113
Alignment:
Q  74 ttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||||||||||||||||||||| ||| | ||||||    
T  22304071 ttttatctgatgtgggacatataactcacacttgtacacaaca 22304113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 25317224 - 25317150
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaacat 117  Q
    |||||| ||| ||| || |||||||||||||||  ||||| ||||||||| |||||||||| || ||| ||||||    
T  25317224 ctctcagttacaaagtgctcaacctccacttttccatctggtgtgggacacataactcacacttccatgcaacat 25317150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 25755477 - 25755387
Alignment:
Q  26 caatagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| |||| ||| || |||| ||||||||  | ||||||||  ||| |||||||||||||| ||||||||||||||| ||| | ||||||    
T  25755477 caatggatttatgagtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataactcacacttgtacacaaca 25755387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 43346701 - 43346643
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||  ||| ||||||| ||||||||||||| |||||||| ||||| ||||||    
T  43346701 tgttcaacctttactattttatccgatgtgggacatacaactcacacttgcacacaaca 43346643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 52634743 - 52634669
Alignment:
Q  42 tctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||| ||||||||   |||||||||  ||| ||||||| |||||||||||||||||||||| ||| | ||||||    
T  52634743 tctcttacttataaggcgttcaacctttactgttttatccgatgtgggacatataactcacacttgtacacaaca 52634669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 29644994 - 29645067
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  |||| |||||  ||| ||||||| |||||||||||||||||| ||| ||||| ||||||    
T  29644994 ctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataacttacacttgcacacaaca 29645067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 53118066 - 53118131
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgc 108  Q
    |||||||||||||  ||||||||||  ||| ||||||| ||| ||| |||||||||||||| ||||    
T  53118066 ctctcacttataaggtgttcaacctttactcttttatccgatatggaacatataactcacacttgc 53118131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 11661601 - 11661541
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| |||||||| ||||| ||||   ||| ||||||| ||||||||||||||||||||||    
T  11661601 ctcttacttataagatgtttaaccgttactattttatccgatgtgggacatataactcaca 11661541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 33809129 - 33809173
Alignment:
Q  72 ttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||||||||||||||||| ||| ||||| ||||||    
T  33809129 ttttctatctgatgtgggacatataacttacacttgcacacaaca 33809173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 6071197 - 6071125
Alignment:
Q  44 tctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||||| |||||||||||||||||| |||   ||||||||||||||||||||| ||||| ||||||    
T  6071197 tctcacttataaagtgttcaacctccacttttctattcaatgtgggacatataactcacacttgcacacaaca 6071125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 8481991 - 8481920
Alignment:
Q  44 tctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||| ||||||| |||||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||||    
T  8481991 tctcatttataaagtgttcaacctccacttttatatctgatgt-ggacatataactcacacttgcacacaaca 8481920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 33605719 - 33605647
Alignment:
Q  44 tctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||| |||||||| |||||| ||||| ||||||    
T  33605719 tctcaattataaagtgttcaacctccacttttctatctgatgtgagacatatagctcacacttgcacacaaca 33605647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 10911632 - 10911557
Alignment:
Q  43 ctctcacttataaaatgttcaacctccactttttt-atctgatgtgggacatataactcacaattgcatacaacat 117  Q
    |||| ||||||||  ||||||||||  |||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  10911632 ctcttacttataaggtgttcaacctttactttttttatctgatgtaggacatataactcacacttgcatacaacat 10911557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 3409325 - 3409259
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| |||||||||||||||||||||||||||||| |||||    
T  3409325 ctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgca 3409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 2579964 - 2580037
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  2579964 ctcttacttataatgtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaaca 2580037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 12092574 - 12092647
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||||| || ||||||||||||||| |||| |||||||||||| |||| |||  ||||| ||||||    
T  12092574 ctctcacttataaagtgctcaacctccacttttctatccgatgtgggacatctaacacacccttgcacacaaca 12092647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 9062441 - 9062501
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| |||||||| |||||||||||  ||| ||||||| ||||||||||||||||||||||    
T  9062441 ctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcaca 9062501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 33606034 - 33605975
Alignment:
Q  50 ttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    ||||||| |||||||||||||||||| |||  |||||||||||||||||| ||| |||||    
T  33606034 ttataaagtgttcaacctccacttttctattcgatgtgggacatataacttacatttgca 33605975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 2378192 - 2378126
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  2378192 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 2378126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 3409726 - 3409660
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| |||||||| ||||||||| |  ||| ||||||||||||||| |||||||||||||| |||||    
T  3409726 ctcttacttataagatgttcaacttttactattttatctgatgtggtacatataactcacacttgca 3409660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 26544115 - 26544049
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  26544115 ctcttacttataacgtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 26544049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 29518569 - 29518503
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  29518569 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 29518503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 29518986 - 29518920
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  29518986 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 29518920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 32741245 - 32741179
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  32741245 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 32741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 16454968 - 16454900
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||  ||||||||||  ||| ||||||||||||||||||| |||||||||| ||| | ||||||    
T  16454968 acttataaggtgttcaacctttactcttttatctgatgtgggacacataactcacatttgtacacaaca 16454900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 12071790 - 12071849
Alignment:
Q  50 ttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    ||||||| ||||||| ||||| |||| ||||||||| | ||||||||||||||| |||||    
T  12071790 ttataaagtgttcaaactccatttttctatctgatgcgagacatataactcacacttgca 12071849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 14748445 - 14748496
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  14748445 tgttcaacctttactattttatccgatgtgggacatataactcacacttgca 14748496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 593801 - 593867
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||||||||||||| |||||||| |||||    
T  593801 ctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaactcacacttgca 593867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 35210270 - 35210204
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||| ||||||||||||||| |||||    
T  35210270 ctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacacttgca 35210204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 1950292 - 1950337
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    ||||||||||  ||| ||||||| ||||||||||||||||||||||    
T  1950292 tgttcaacctttactcttttatccgatgtgggacatataactcaca 1950337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 2578535 - 2578607
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||| ||||||||||  ||| ||||||| | |||||||||||||||||||| ||| | ||||||    
T  2578535 ctcttacttataaagtgttcaacctttactcttttatccg-tgtgggacatataactcacacttgtacacaaca 2578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 3058287 - 3058226
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||| ||| |||||    
T  3058287 acttataaggtgttcaacctttactattttatccgatgtgggacatataactaacacttgca 3058226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 3415509 - 3415464
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    ||||||||||  ||| |||||| |||||||||||||||||||||||    
T  3415509 tgttcaacctttactattttatgtgatgtgggacatataactcaca 3415464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 16108129 - 16108056
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  |||||||| |  ||| ||||||||||||||| |||||||||||||| ||| | ||||||    
T  16108129 ctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaaca 16108056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 2377820 - 2377760
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| ||||||||  ||||||||||  ||| ||||| | ||||||||||||||||||||||    
T  2377820 ctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactcaca 2377760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 32460672 - 32460732
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| ||||||||  ||||||||||  ||| ||||||  ||||||||||||||||||||||    
T  32460672 ctcttacttataaggtgttcaacctttactattttatacgatgtgggacatataactcaca 32460732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 1085708 - 1085781
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||| ||||||||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  1085708 ctcttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 1085781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 30245560 - 30245487
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  30245560 ctcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaaca 30245487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 10341901 - 10341842
Alignment:
Q  40 gttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataact 99  Q
    |||||| |||||||||| |||||||||||||||||| |||| |||||| |||||||||||    
T  10341901 gttctcccacttataaagtgttcaacctccacttttctatccgatgtgagacatataact 10341842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 36623021 - 36622955
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaa 114  Q
    |||||||||||||| |||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||    
T  36623021 acttataaaatgtttaacctttactattttatccgatgtgggacatataactcacacttgcacacaa 36622955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 7517646 - 7517573
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  7517646 ctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaaca 7517573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 7554091 - 7554018
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  7554091 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 7554018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 22566754 - 22566827
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||| ||||||| ||||||||||||    
T  22566754 ctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactcacacttgcatacaaca 22566827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 23452 - 23542
Alignment:
Q  26 caatagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||| || ||| || |||| ||||||||  ||||||||||  ||| || |||| ||||||| |||||||||||||||||||| ||||||    
T  23452 caataggtttatgggtcctcttacttataaggtgttcaacctttactattgtatccgatgtggaacatataactcacaattgcacacaaca 23542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 118408 - 118466
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||  |||||| ||||||||||||||||||||||| ||| ||||| ||||||    
T  118408 tgttcaacctttacttttctatctgatgtgggacatataacttacacttgcacacaaca 118466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 30255405 - 30255332
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||||||||||||||||| |||| ||||| ||||||    
T  30255405 ctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaaca 30255332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 34218126 - 34218199
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||||  |||||||| |  ||||||||||| |||||| ||||||||||||||| ||| | ||||||    
T  34218126 ctctcacttataaggtgttcaacatttacttttttatccgatgtgagacatataactcacatttgtacacaaca 34218199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 40094502 - 40094559
Alignment:
Q  59 gttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||  ||| ||||||||||||| |||||||||||||||| ||||| ||||||    
T  40094502 gttcaacctttactcttttatctgatgttggacatataactcacacttgcacacaaca 40094559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 45434702 - 45434629
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||||||||||| |||||||||||||||||| ||| ||| | ||||||    
T  45434702 ctcttacttataaggtgttcaacctttacttttttatccgatgtgggacatataacttacacttgtacacaaca 45434629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 43241556 - 43241488
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||  ||||||||||  | ||||||||| ||||||| |||||||||||||| ||||| ||||||    
T  43241556 acttataaggtgttcaacctttatttttttatccgatgtggaacatataactcacacttgcacacaaca 43241488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 14681561 - 14681510
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    ||||||||||  ||| |||||||||||||||||||||||||| ||| |||||    
T  14681561 tgttcaacctttactattttatctgatgtgggacatataacttacacttgca 14681510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 37345983 - 37345909
Alignment:
Q  44 tctcacttataaaatgttcaacctccacttttttatctgatgtgggac--atataactcacaattgcatacaaca 116  Q
    |||||||||||||||||| ||||||||||||| |||| ||| |  |||  |||||||||||| ||||| ||||||    
T  37345983 tctcacttataaaatgtttaacctccacttttctatcagatatatgacatatataactcacacttgcacacaaca 37345909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 40230383 - 40230454
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaa 114  Q
    |||| |||||||| ||||||||| |  ||||||||||  |||||||||||||||||| ||| ||||| ||||    
T  40230383 ctcttacttataagatgttcaacttttacttttttattcgatgtgggacatataacttacacttgcacacaa 40230454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 30244752 - 30244694
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||  ||| |||||||  ||||||||||||||||||||| ||||| ||||||    
T  30244752 tgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaaca 30244694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 37533102 - 37533168
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| |||||||  ||||||||||||||||||||| |||||    
T  37533102 ctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacacttgca 37533168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 45433324 - 45433234
Alignment:
Q  26 caatagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||| || ||| ||||||| ||||||||  ||||||||||  ||| ||||||| |||||||  ||||||||||||| ||| | ||||||    
T  45433324 caataggtttatgagttctcttacttataaggtgttcaacctttactcttttatccgatgtggatcatataactcacacttgtacacaaca 45433234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 16569262 - 16569189
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  | ||||||||  ||| || |||| |||||| ||||||||||||||| ||||||||||||    
T  16569262 ctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaaca 16569189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 16596400 - 16596473
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  | ||||||||  ||| || |||| |||||| ||||||||||||||| ||||||||||||    
T  16596400 ctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaaca 16596473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 22567131 - 22567203
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||||||| |||||| ||||||| ||||||||||||    
T  22567131 ctcttacttataaggtgttcaacctttactcttttatccgatgtgg-acatattactcacacttgcatacaaca 22567203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 29157626 - 29157565
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    ||||||||  ||||||||||  ||| ||||||| | |||||||||||||||||||| |||||    
T  29157626 acttataaggtgttcaacctttactattttatccggtgtgggacatataactcacacttgca 29157565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 30244336 - 30244263
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  | ||||||||  ||| ||||||| |||||||||||||||||||||| ||| | ||||||    
T  30244336 ctcttacttataaggtcttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaaca 30244263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 36109009 - 36109082
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||| || |||||||||||| ||||| ||||||    
T  36109009 ctcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaaca 36109082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 36534876 - 36534949
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||| ||| ||||||| || ||||||||||||| | ||| ||||| ||||||    
T  36534876 ctcttacttataaggtgttcaacctctactgttttatccgaggtgggacatataagttacacttgcacacaaca 36534949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 41910686 - 41910759
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||| ||||||  | ||||||||  ||| ||||||| |||||||||||||||||||||| || || ||||||    
T  41910686 ctctcagttataaggtattcaacctttactcttttatccgatgtgggacatataactcacacttacacacaaca 41910759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 11845274 - 11845198
Alignment:
Q  26 caatagattcatgtgttctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcac 102  Q
    |||| |||| ||| || |||| ||||||||  ||||||||||  ||| ||||||| ||||||| |||||||||||||    
T  11845274 caatggatttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactcac 11845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 24177496 - 24177428
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||  |||||| |||  ||| ||||||| |||||||||||||||||||| | ||||| ||||||    
T  24177496 acttataaggtgttcagcctttactcttttatccgatgtgggacatataactcatacttgcacacaaca 24177428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 30245138 - 30245070
Alignment:
Q  48 acttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||  ||||||||||  ||| ||||||| ||||||| |||||||||||||| ||| | ||||||    
T  30245138 acttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacacttgtacacaaca 30245070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 47129161 - 47129101
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| |||||||| | |||||||||  ||| ||||||| |||||| |||||||||||||||    
T  47129161 ctcttacttataagaggttcaacctttactattttatccgatgtgagacatataactcaca 47129101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 39903 - 39831
Alignment:
Q  44 tctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||||  || ||||| |||||||| |||| |||||||||||||||||||||| ||| | ||||||    
T  39903 tctcacttataaagagtccaaccaccacttttctatccgatgtgggacatataactcacacttgaacacaaca 39831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 234 - 300
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgca 109  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||||||||||||||||||| |||||    
T  234 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 606 - 666
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcaca 103  Q
    |||| ||||||||  ||||||||||  ||| ||||| | ||||||||||||||||||||||    
T  606 ctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactcaca 666  T

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Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 17563 - 17621
Alignment:
Q  58 tgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    ||||||||||  ||| |||||||||||||| ||||||||||||||| ||||| ||||||    
T  17563 tgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacacaaca 17621  T

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Target: scaffold0734 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 5462 - 5389
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| ||||| |||||||||||||||| ||||| ||||||    
T  5462 ctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcacacaaca 5389  T

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Target: scaffold0734; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 5843 - 5770
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| ||||||| |||||| ||||||||||||||| ||||| ||||||    
T  5843 ctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaaca 5770  T

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Target: scaffold0391 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 3091 - 3150
Alignment:
Q  57 atgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||||||||||  ||| ||||||| ||||||||||||||||||||||  |||| ||||||    
T  3091 atgttcaacctttactcttttatccgatgtgggacatataactcacacctgcacacaaca 3150  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 5423 - 5350
Alignment:
Q  43 ctctcacttataaaatgttcaacctccacttttttatctgatgtgggacatataactcacaattgcatacaaca 116  Q
    |||| ||||||||  ||||||||||  ||| || |||| ||||||| |||||||||||||| ||||| ||||||    
T  5423 ctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatataactcacacttgcacacaaca 5350  T

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