View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14335_low_20 (Length: 421)
Name: NF14335_low_20
Description: NF14335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14335_low_20 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 397; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Original strand, 38096311 - 38096731
Alignment:
| Q |
1 |
accaccaccacctacaacaaattccactactacccttgctgagaaactgaaacaaagagaagaaagaagggtcaacaatgtcaaagatagtaactatcca |
100 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
38096311 |
accaccaccttctacaacaaattccactactacccttgctgagaaactgaaacaaagagaagaaagaagggtcaacaatgtcaaagataataactatcca |
38096410 |
T |
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| Q |
101 |
acgacgtcggcaccatcgactacgtcgagtcgttactctgttttgttgcagctgatagcgtgtggaagttcaggtgcagagatgaaagcaaagcagcagg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38096411 |
acgacgtcggcaccatcgactacgtcgagtcgttactctgttttgctgcagctgatagcgtgtggaagttcaggtgcagagatgaaagcaaagcagcagg |
38096510 |
T |
|
| Q |
201 |
aagggaggctgagcaatgtggggaccacaagcaaaagaagggagagtgttgatgaagagaaagtgtattctggtgatgaagatatatgtgtaacggagaa |
300 |
Q |
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||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38096511 |
aagggaggctgagcaatgtggggacaacaagcaagagaagggagagtgttgatgaagagaaagtgtattctggtgatgaagatatatgtgtaacggagaa |
38096610 |
T |
|
| Q |
301 |
tccaaggttgatggggaatttgcagagtgaagagaaggaatactttagtgggagtattgtggaatccatgaaagcaaaccgggttgcttttcaagctgaa |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38096611 |
tccaaggttgatggggaatttgcagagtgaagagaaggaatactttagtgggagtattgtggaatccatgaaagcaaaccgggttgcttttcaagctgaa |
38096710 |
T |
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| Q |
401 |
cctgtgctcaagaaatctaat |
421 |
Q |
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||||||||||||||||||||| |
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| T |
38096711 |
cctgtgctcaagaaatctaat |
38096731 |
T |
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