View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14335_low_22 (Length: 405)
Name: NF14335_low_22
Description: NF14335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14335_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 387
Target Start/End: Complemental strand, 10991175 - 10990789
Alignment:
| Q |
1 |
ataattttaaatgcaattaaagattgattatatatttacaagaattgaaaattctaagtcatgactaagttaaccatggttagataatctattagtcaac |
100 |
Q |
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| T |
10991175 |
ataattttaaatgcaattaaagattgattatatatttacaagaattgaaaattctaagtcatgactaagttaaccatggttagataatctattagtcaac |
10991076 |
T |
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| Q |
101 |
aaatattttatgtttgttttaatctggtgaactatgtttagacatttcttcatccatcttcctagttagctnnnnnnnnnnnnnnnnnnnnnnntaatat |
200 |
Q |
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| T |
10991075 |
aaatattttatgtttgttttaatcaggtgaactatgtttagacatttcttcatccatcttcctagttagctaaaaaaattgaaaatgtaaaaaataatat |
10990976 |
T |
|
| Q |
201 |
aagaatatggctgttttcaatagagtccaaaagaagaatccaaatatgaatctctatcaaatttagtaaaatagtgaattttgtaagagaaaaagtgggt |
300 |
Q |
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| T |
10990975 |
aagaatatggctgttttcaatagagtccaaaagaagaatccaaatatgaatctctatcaaatttagtaaaatagtgaattttgtaagagaaaaagtgggt |
10990876 |
T |
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| Q |
301 |
ggaaattaaacgtgtgatattttgctaaaaaattataggtccatattagaagcgctcttaactatagtttcttaaatatgttaacca |
387 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10990875 |
ggaaattaaacgtgtgatattttgctaaaaaattataggtccatattagaagcgctcttaactatagtttcttaaatatgttaacca |
10990789 |
T |
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