View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14335_low_38 (Length: 240)
Name: NF14335_low_38
Description: NF14335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14335_low_38 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 2783463 - 2783240
Alignment:
| Q |
1 |
agcgatcgtaactaaccgtccgtcaatcccggagagattgttagggcggttatggcgaagggaggacaatgcttgttggagaagctttggaggtgtattc |
100 |
Q |
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| T |
2783463 |
agcgatcgtaactaaccgtccgtcaatcccggagagattgttagggcggttatggcgaagggaggacaatgcttgttggagaagctttggaggtgtattc |
2783364 |
T |
|
| Q |
101 |
gaacggttttctttgttgttgcattggtggtttcgcttattgttacgtcgcttccggtggttgttgcggtggttgatgttcttgttccgtgtgttttgat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2783363 |
gaacggttttctttgttgttgcattggtggtttcgctgattgttacgtcgcttccggtggttgttgcggtggttgatgttcttgttccgtgtgttttgat |
2783264 |
T |
|
| Q |
201 |
ctccaattttacttgtgttaattg |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
2783263 |
ctccaattttacttgtgttaattg |
2783240 |
T |
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