View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14336_high_46 (Length: 249)
Name: NF14336_high_46
Description: NF14336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14336_high_46 |
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Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 39 - 235
Target Start/End: Original strand, 43016061 - 43016257
Alignment:
| Q |
39 |
taccatagaacaatcaaagaaacaaatatatacaaaaacaaaggacggtggtgtttagttagtcacatcacatgtatcttgcatcacagcaacatcacag |
138 |
Q |
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| T |
43016061 |
taccatagaacaatcaaagaaacaaatatatacaaaaacaaaggacggtggtgtttagttagtcacatcacatgtatcttgcatcacagcaacatcacag |
43016160 |
T |
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| Q |
139 |
attgaaaaatgaccagaagcattattttggctctatattgctatagaatgaaattaacaaatgagttttcgtgaaggcttttattgaattcctttgt |
235 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43016161 |
attgaaaaatgaccagaagcattattttggctctatattgctatagaatgaaattaacaaatgagttttcgtgaaggcttttattgaattcctttgt |
43016257 |
T |
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