View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14336_high_50 (Length: 233)
Name: NF14336_high_50
Description: NF14336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14336_high_50 |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 13 - 217
Target Start/End: Original strand, 329655 - 329859
Alignment:
| Q |
13 |
ttatactgttattgggtacgtgtggtgccgtaggatatgttttctacaagtacagaattcaggtatcattcattcattctcagtggtacattttaagcat |
112 |
Q |
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| T |
329655 |
ttatactgttattgggtacgtgtggtgccgtaggatatgttttctacaagtacagaattcaggtatcattcattcattctcagtggtacattttaagcat |
329754 |
T |
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| Q |
113 |
tgaaatctagtcctacctaaaattgttgaaactaaaatacaataattgtgtgtactgcagagatatatggatgatgaaataagggcaataatggcccaat |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
329755 |
tgaaatctagtcctacctaaaattgttgaaactaaaatacaataattgtgtgtactgcagagatatatggatgatgaaataagggcaataatggcccaat |
329854 |
T |
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| Q |
213 |
acatg |
217 |
Q |
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||||| |
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| T |
329855 |
acatg |
329859 |
T |
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