View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14336_low_6 (Length: 599)
Name: NF14336_low_6
Description: NF14336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14336_low_6 |
 |  |
|
| [»] scaffold0059 (1 HSPs) |
 |  |  |
|
| [»] scaffold0554 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 550; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 550; E-Value: 0
Query Start/End: Original strand, 1 - 582
Target Start/End: Original strand, 12637001 - 12637582
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12637001 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagt |
12637100 |
T |
 |
| Q |
101 |
actttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctctaag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12637101 |
actttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctctaag |
12637200 |
T |
 |
| Q |
201 |
taaaagaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagctcctttcttg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
12637201 |
taaaagaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagttcctttcttg |
12637300 |
T |
 |
| Q |
301 |
ttgaatatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgtttcac |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12637301 |
ttgaatatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgtttcac |
12637400 |
T |
 |
| Q |
401 |
ctccagcaccaatcatgtcctgaaaaatatatcaggatatcaaaaaagactactaaagtctaaaagagataatttgatagcatcaatcgcaaggttttaa |
500 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||| |
|
|
| T |
12637401 |
ctccagcaccaatgatgtcctgaaaaatatatcaggatttcaaaaaagactactaaagtctaaaagagataatttgttggcatcaatcacaaggttttaa |
12637500 |
T |
 |
| Q |
501 |
attgtggttgcgtcgcaatctttgatattgcaataatcaagaatctgaatcgtgattatatcgtgtttgctgatacaccaaa |
582 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
12637501 |
attgtggttgcgtcgcaatctttgatattgcaataatcaagaatctgaatcgtgattatatcgtgttttctaatacaccaaa |
12637582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 9 - 426
Target Start/End: Complemental strand, 15885954 - 15885534
Alignment:
| Q |
9 |
accaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagtactttgga |
108 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
15885954 |
accaaaaggaatgtactcaaaattattccctttatagtcaatagagctaccaatgaatctctctggataaaacctctctggttcagtccaatactttgga |
15885855 |
T |
 |
| Q |
109 |
tctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctct---aagtaaaa |
205 |
Q |
| |
|
||||| ||||| | ||||||||| ||||||||||| ||||||| |||||||||||| || ||||| |||||||||||| |||||||||| |||||||| |
|
|
| T |
15885854 |
tctcttccaatcgcccatgcattgactatcaccttgcttttggttggtatatgataaccatcaatctcacatgcttgttcacattctcttggaagtaaaa |
15885755 |
T |
 |
| Q |
206 |
gaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagctcctttcttgttgaa |
305 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||| ||| |||||||||| ||| ||||| |||||||| ||||||||| |||||| ||||||| |
|
|
| T |
15885754 |
gaggagctggagggtgtaaccttaaggtctctttcacaactgacttcaaataagtgagctcattaatatagttctcaccaacaattccttttgtgttgaa |
15885655 |
T |
 |
| Q |
306 |
tatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgtttcacctcca |
405 |
Q |
| |
|
|||| ||| ||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || ||||| || |||||| |
|
|
| T |
15885654 |
catttctcttacttcatcttgtgctttcttcatcactctttcatcccttaccaactctgccattgcccaaactatggtggtactcgatgtatctcctcca |
15885555 |
T |
 |
| Q |
406 |
gcaccaatcatgtcctgaaaa |
426 |
Q |
| |
|
||||||| ||||||||||||| |
|
|
| T |
15885554 |
gcaccaaacatgtcctgaaaa |
15885534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 412
Target Start/End: Original strand, 12609905 - 12610319
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagt |
100 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||| |||||||||||||||||| |
|
|
| T |
12609905 |
cttccagcaccaaagggaatgtactcaaaattattccctttgtagtcaatagagctaccgatgaatctctccggataaaacttctctggttcagtccagt |
12610004 |
T |
 |
| Q |
101 |
actttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctct--- |
197 |
Q |
| |
|
||||||||||||| ||||| | ||||||||| ||||||||||| |||||| ||||||| ||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
12610005 |
actttggatctcttccaatcgcccatgcattgactatcaccttgcttttgattggtatacgatacccatcaatctcacatgcttgtccacattctcttgg |
12610104 |
T |
 |
| Q |
198 |
aagtaaaagaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagctcctttc |
297 |
Q |
| |
|
||||||||||||| |||||| |||||||||| ||||||||||| ||| |||| ||||| ||||||||||||| | ||||| ||||| ||||||| |
|
|
| T |
12610105 |
aagtaaaagaggacctggaggatgtaaccttaaggtctctttcacaactgactttaaataagtgagttcatttatacaattttcttcaacatttcctttc |
12610204 |
T |
 |
| Q |
298 |
ttgttgaatatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgttt |
397 |
Q |
| |
|
|||||||||| | ||| || |||| |||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||| | |||||| | |
|
|
| T |
12610205 |
atgttgaatatatctcttacctcatcttgtgctttcttcatcactcttttatcccttaccaactctgacattgcccaaactatagtagaagctgatgtat |
12610304 |
T |
 |
| Q |
398 |
cacctccagcaccaa |
412 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
12610305 |
cacctccagcaccaa |
12610319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 2 - 426
Target Start/End: Original strand, 62154 - 62581
Alignment:
| Q |
2 |
ttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagta |
101 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
62154 |
ttccagcaccaaaaggaatgtactcgaaattattcccgttgtagtcaatagaactaccaatgaatctctctggataaaacctctctggttccgtccagta |
62253 |
T |
 |
| Q |
102 |
ctttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctct---a |
198 |
Q |
| |
|
| |||||||||| || |||| ||||||||| ||||||| ||| |||| ||||||||||||||| ||||| |||||||||| || ||||||||| | |
|
|
| T |
62254 |
ccttggatctcttccgattgcccatgcattaactatcagctttgttttcattggtatatgatacccatcaatctcacatgcttctctacattctcttgga |
62353 |
T |
 |
| Q |
199 |
agtaaaagaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagctcctttct |
298 |
Q |
| |
|
|||||||||| | ||| ||||||||||| || ||||||||||| | | |||||| |||| |||||||| ||| | ||||| ||| |||||| ||| |
|
|
| T |
62354 |
agtaaaagagcacctggggggtgtaacctcagggtctctttcacaattgacttcacgtatttgagttcatgcatacaactttcatcaaaagctcccttca |
62453 |
T |
 |
| Q |
299 |
tgttgaatatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgtttc |
398 |
Q |
| |
|
||||| |||||| ||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | | | |||||| || |
|
|
| T |
62454 |
tgttgtatatttctctcacttcatcttgtgctttcttcatcactcttggatctcttaccaactctgccattgcccaaactacgctcaaagctgatgtatc |
62553 |
T |
 |
| Q |
399 |
acctccagcaccaatcatgtcctgaaaa |
426 |
Q |
| |
|
|||||||||||||| ||||||||||||| |
|
|
| T |
62554 |
acctccagcaccaaacatgtcctgaaaa |
62581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 1 - 426
Target Start/End: Original strand, 21779813 - 21780241
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagt |
100 |
Q |
| |
|
||||| |||||||| |||||||||||||||||| | ||||| |||||||| |||| | |||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
21779813 |
cttccggcaccaaatggaatgtactcaaaattactccctttaaagtcaatatcgctatcgatgaatctctctggataaaacatctctggttcagtccagt |
21779912 |
T |
 |
| Q |
101 |
actttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctctaag |
200 |
Q |
| |
|
| ||||||||||| |||||| ||| ||||| | |||||||||| | || || || || || || | || ||||||||||| | ||||||||| | |
|
|
| T |
21779913 |
agtttggatctcttgcaattgcccaagcattgattatcaccttagtcttaatcggaatgtggtaaccatttatatcacatgcttgactacattctctcgg |
21780012 |
T |
 |
| Q |
201 |
taa---aagaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagctcctttc |
297 |
Q |
| |
|
||| |||||| | ||||||||||| ||||| || ||||| || ||| | |||||||| | ||||||||| || | |||||| |||| ||||||| |
|
|
| T |
21780013 |
taacaaaagaggtgctggagggtgtagccttaaggtttctttgacaactgatttcaaataattgagttcattgatgcaattttcatcaacccttcctttc |
21780112 |
T |
 |
| Q |
298 |
ttgttgaatatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgttt |
397 |
Q |
| |
|
| ||||| | || ||||||||||| ||||||||||||||| | ||||||||||||||| | ||| ||||||||||| ||||||| | | |||||| | |
|
|
| T |
21780113 |
attttgaaaacttctctcacttcatcttgtgctttcttcattattcttggatcccttaccatttctaccattgcccaatctatggtgcttgctgatgtct |
21780212 |
T |
 |
| Q |
398 |
cacctccagcaccaatcatgtcctgaaaa |
426 |
Q |
| |
|
||||||||||||||| ||||||||||||| |
|
|
| T |
21780213 |
cacctccagcaccaaacatgtcctgaaaa |
21780241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 103; Significance: 6e-51; HSPs: 16)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 426
Target Start/End: Original strand, 23039041 - 23039469
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagt |
100 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||| ||||||| |||||||| | ||| ||| |||||||||||||| ||| ||||| || |||||||||| |
|
|
| T |
23039041 |
cttccggcaccaaaaggaatgtactcataattacttcctttatagtcaatggcgctgtcaaggaatctctctggataaaatctctccggctcagtccagt |
23039140 |
T |
 |
| Q |
101 |
actttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctct--- |
197 |
Q |
| |
|
| ||||||||||| |||||| ||| ||||| |||||||||||||| || ||||| ||||| || | || ||||||| ||| | ||||||||| |
|
|
| T |
23039141 |
aatttggatctcttgcaattgcccaagcattgactatcaccttactcttaataggtatgtgataaccatttatctcacatgtttgacgacattctcttgg |
23039240 |
T |
 |
| Q |
198 |
aagtaaaagaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagctcctttc |
297 |
Q |
| |
|
|| |||||||| ||||||||||||||||| || || ||||| || ||| |||||||||| | ||||||||| || | |||||| |||| ||||||| |
|
|
| T |
23039241 |
cagcaaaagaggtgttggagggtgtaacctcagggtttctttgacaactgacttcaaataattgagttcattgatgcaattttcatcaacccttcctttc |
23039340 |
T |
 |
| Q |
298 |
ttgttgaatatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgttt |
397 |
Q |
| |
|
| ||||| | | |||||| |||| ||| ||||||||||| | |||||||||||||| | ||| |||||||||| ||||||| | | |||||| | |
|
|
| T |
23039341 |
attttgaaaacctctctcacctcatcttgcgctttcttcattattcttggatcccttatcatttctaccattgcccagtctatggtgcttgctgatgtct |
23039440 |
T |
 |
| Q |
398 |
cacctccagcaccaatcatgtcctgaaaa |
426 |
Q |
| |
|
||||||||||||||| | |||||||||| |
|
|
| T |
23039441 |
cacctccagcaccaaaaacgtcctgaaaa |
23039469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 422
Target Start/End: Original strand, 23145920 - 23146344
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagt |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||| | ||||| ||||||||| ||| | |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
23145920 |
cttccagcaccaaaaggaatgtactcaaagttactccctttatagtcaatatcgctgtcgatgaatctctctggataaaacctctctggttcagtccagt |
23146019 |
T |
 |
| Q |
101 |
actttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctctaag |
200 |
Q |
| |
|
| ||||||||||| ||| || ||| ||||| |||| ||||||| | || ||||| ||||| || | || |||||| |||| | ||||||||| | |
|
|
| T |
23146020 |
agtttggatctcttgcaactgcccaagcattgactaacaccttagtcttaatcggtatgtgataaccatttatatcacattcttgactacattctctcgg |
23146119 |
T |
 |
| Q |
201 |
t---aaaagaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagctcctttc |
297 |
Q |
| |
|
| |||||||| | ||||||||||| ||||| || ||||| || ||||| |||||||| | ||||||||| || | |||||| |||| ||||||| |
|
|
| T |
23146120 |
taacaaaagaggtgctggagggtgtagccttaaggtttctttgacaactaatttcaaataattgagttcattgatgcaattttcatcaacccttcctttc |
23146219 |
T |
 |
| Q |
298 |
ttgttgaatatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgttt |
397 |
Q |
| |
|
| ||||| | | |||||| |||| ||||||||||||||| | |||||||||| |||| || ||| ||||||||||| ||||||| | | |||||| | |
|
|
| T |
23146220 |
attttgaaaacctctctcacctcatcttgtgctttcttcatgattcttggatcctttaccaattctaccattgcccaatctatggtgcttgctgatgtct |
23146319 |
T |
 |
| Q |
398 |
cacctccagcaccaatcatgtcctg |
422 |
Q |
| |
|
||||||||||| ||| |||||||| |
|
|
| T |
23146320 |
cacctccagcagcaaaaatgtcctg |
23146344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 426
Target Start/End: Original strand, 23036170 - 23036598
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagt |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||| | |||||||||||||||| ||| | ||||||||||| |||| ||| ||||||||||||||||||| |
|
|
| T |
23036170 |
cttccggcaccaaaaggaatgtactcaaagttactccctttgtagtcaatagcgctgtcgatgaatctctcgggataaaatctctctggttcagtccagt |
23036269 |
T |
 |
| Q |
101 |
actttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctct--- |
197 |
Q |
| |
|
| ||||||||||| |||||| ||| ||||||| | | |||||||| || ||||| ||||| || | || |||||||||| |||| ||||| |
|
|
| T |
23036270 |
aatttggatctcttgcaattgcccaagcatttattgttaccttactcttaataggtatgtgataaccatttatcacacatgcttgaacacactctcttgg |
23036369 |
T |
 |
| Q |
198 |
aagtaaaagaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagctcctttc |
297 |
Q |
| |
|
|| |||||||| ||||||||||||||||| || || ||||| || ||| | |||||||| |||||| || ||| | || || | || ||||||| |
|
|
| T |
23036370 |
tagcaaaagaggtgttggagggtgtaacctcagggtttctttgacgactgatttcaaataaatgagttcgttgatacaattctcttcgacccttcctttc |
23036469 |
T |
 |
| Q |
298 |
ttgttgaatatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgttt |
397 |
Q |
| |
|
| ||||| | | |||||| ||| ||||||||||||||| | |||||||| |||||| | ||||||||||||||| ||||||| | | |||||| | |
|
|
| T |
23036470 |
attttgaaaacctctctcacctcagcttgtgctttcttcattattcttggattccttaccatttctgccattgcccaatctatggtgcttgctgatgtct |
23036569 |
T |
 |
| Q |
398 |
cacctccagcaccaatcatgtcctgaaaa |
426 |
Q |
| |
|
||||||||||||||| |||||||||||| |
|
|
| T |
23036570 |
cacctccagcaccaaaaatgtcctgaaaa |
23036598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 429
Target Start/End: Original strand, 23148758 - 23149189
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagt |
100 |
Q |
| |
|
||||| |||||||||||||||||||| || ||| | ||||| ||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
23148758 |
cttccggcaccaaaaggaatgtactcgaagttactccctttatagtcaatatcgctttcaatgaatctctctggataaaacctctctggttcagtccagt |
23148857 |
T |
 |
| Q |
101 |
actttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctctaag |
200 |
Q |
| |
|
| |||| |||||| |||||| ||| ||||| | |||||| ||| | || || || ||||| || | || ||||| ||||| | ||||||||| | |
|
|
| T |
23148858 |
agtttgaatctcttgcaattgcccaagcattgattatcactttagtcttaatcggaatgtgataaccatttatatcacacgcttgactacattctctcgg |
23148957 |
T |
 |
| Q |
201 |
t---aaaagaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagctcctttc |
297 |
Q |
| |
|
| |||||||| | |||||||||| ||||| || ||||| || ||||| |||||||| | ||||||||| || | |||||| |||| ||||||| |
|
|
| T |
23148958 |
taacaaaagaggtgccggagggtgtagccttaaggtttctttgacaactaatttcaaataattgagttcattgatgcaattttcatcaacctttcctttc |
23149057 |
T |
 |
| Q |
298 |
ttgttgaatatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgttt |
397 |
Q |
| |
|
| ||||| | | |||||| |||| ||||||||||||||| | |||||||||| |||| | |||| ||||||||||| ||||||| | | |||||| | |
|
|
| T |
23149058 |
attttgaaaacctctctcacctcatcttgtgctttcttcattattcttggatcctttaccatctctaccattgcccaatctatggtgcttgctgatgtct |
23149157 |
T |
 |
| Q |
398 |
cacctccagcaccaatcatgtcctgaaaaata |
429 |
Q |
| |
|
| ||||||||||||| |||||||||| |||| |
|
|
| T |
23149158 |
cgcctccagcaccaaaaatgtcctgaacaata |
23149189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 7 - 429
Target Start/End: Original strand, 23024278 - 23024703
Alignment:
| Q |
7 |
gcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagtactttg |
106 |
Q |
| |
|
|||||||||||||| |||||||| ||| | ||||| ||||||||| ||| | |||||||||||||||| ||||||||||||||| |||||||| |||| |
|
|
| T |
23024278 |
gcaccaaaaggaatatactcaaagttactccctttatagtcaatatcactatcgatgaatctctctggataaaacctctctggttcggtccagtaatttg |
23024377 |
T |
 |
| Q |
107 |
gatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctct---aagtaa |
203 |
Q |
| |
|
||||||| |||||| ||| ||||| |||||||||||| | || | ||| || | ||| || || || | ||||| ||| |||||||||| | ||| |
|
|
| T |
23024378 |
gatctcttgcaattgcccaagcattgactatcaccttagtcttagttggaatgtcataaccgtctatcttacatgattgagcacattctctcggtattaa |
23024477 |
T |
 |
| Q |
204 |
aagaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagctcctttcttgttg |
303 |
Q |
| |
|
||| || | |||||||||||||| || || ||||| || | | | |||||||| | |||||||| ||| | || || |||| ||||||| | ||| |
|
|
| T |
23024478 |
aagtggtgccggagggtgtaacctcagggtttctttgacaattgatttcaaataattaagttcattgatacaattctcttcaacccttcctttcatattg |
23024577 |
T |
 |
| Q |
304 |
aatatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgtttcacctc |
403 |
Q |
| |
|
|| || | || ||| ||| ||||||||||||||| | |||||||| | |||| | ||||||||||||||| ||||||| | | |||||| ||||||| |
|
|
| T |
23024578 |
aaaatctctcgcacctcagcttgtgctttcttcattattcttggattctttaccatttctgccattgcccaatctatggtgcttgctgatgtctcacctc |
23024677 |
T |
 |
| Q |
404 |
cagcaccaatcatgtcctgaaaaata |
429 |
Q |
| |
|
||||||||| |||||||||| |||| |
|
|
| T |
23024678 |
cagcaccaaaaatgtcctgaacaata |
23024703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 7 - 429
Target Start/End: Original strand, 23140052 - 23140477
Alignment:
| Q |
7 |
gcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagtactttg |
106 |
Q |
| |
|
||||||||||||||||||||||||| | | ||||| |||||||||| | | || |||||||||||||||| ||| ||||||||||||||||||| |||| |
|
|
| T |
23140052 |
gcaccaaaaggaatgtactcaaaatcactccctttatagtcaatagtgtttcccatgaatctctctggataaaatttctctggttcagtccagtagtttg |
23140151 |
T |
 |
| Q |
107 |
gatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctct---aagtaa |
203 |
Q |
| |
|
||||||| | |||| ||||||||| || | ||||||| | || |||||| ||||| || | || ||||||||||| ||||| ||||| || || |
|
|
| T |
23140152 |
gatctctcgcgattgcccatgcattgacgaccaccttagtcttaaatggtatgtgataaccatgtatctcacatgcttgaccacactctcttggtagcaa |
23140251 |
T |
 |
| Q |
204 |
aagaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagctcctttcttgttg |
303 |
Q |
| |
|
|||||| |||| ||||||||| | || ||||| || | | | |||||||| | ||| || || || | |||||| |||| ||||||| | ||| |
|
|
| T |
23140252 |
aagaggcaccggagtgtgtaacctcaaggtttctttgacgattgatttcaaataatggagctcgttgatgcaattttcatcaacccttcctttcattttg |
23140351 |
T |
 |
| Q |
304 |
aatatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgtttcacctc |
403 |
Q |
| |
|
|| | | |||||| |||| ||| |||||||||| | |||||||||||||| | ||| ||||||||||| ||||||| | | |||||| ||||||| |
|
|
| T |
23140352 |
aaaacctctctcacctcatcttgcactttcttcattattcttggatcccttatcatttctaccattgcccaatctatggtgcttgctgatgtctcacctc |
23140451 |
T |
 |
| Q |
404 |
cagcaccaatcatgtcctgaaaaata |
429 |
Q |
| |
|
||||||||| |||||||||| |||| |
|
|
| T |
23140452 |
cagcaccaaaaatgtcctgaacaata |
23140477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 22971951 - 22972141
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagt |
100 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| |||||||| | |||| ||| ||| |||| ||||| || |||| |||| | ||||| |||||||| | |
|
|
| T |
22971951 |
cttccagcaccaaatggaatgtactcaaaatttgttcctttgaaatcaagagaactatcaataaatctttcaggataaaacttatctggatcagtccaat |
22972050 |
T |
 |
| Q |
101 |
actttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccaca |
191 |
Q |
| |
|
| |||||||| || ||||||| ||| ||||| | ||||||| |||||||| |||||| ||||| || ||||| ||||| ||||||||||| |
|
|
| T |
22972051 |
attttggatcccttccaattgcccaagcattgattatcaccctacttttgattggtatgtgataaccatcaatctcacaagcttgtccaca |
22972141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 22946404 - 22946594
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagt |
100 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| |||||||| | |||| ||| ||| |||| ||||| || |||| |||| | ||||| |||||||| | |
|
|
| T |
22946404 |
cttccggcaccaaatggaatgtactcaaaatttgttcctttgaaatcaacagaactatcaataaatctttcaggataaaacttatctggatcagtccaat |
22946503 |
T |
 |
| Q |
101 |
actttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccaca |
191 |
Q |
| |
|
| |||||||| || ||||||| ||| ||||| | ||||||| |||| ||| |||||| ||||| || ||||| |||||||||||| |||| |
|
|
| T |
22946504 |
attttggatcccttccaattgcccaagcattgattatcaccctactattgattggtatgtgataaccatcaatctcacatgcttgtgcaca |
22946594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 23017069 - 23017258
Alignment:
| Q |
8 |
caccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagtactttgg |
107 |
Q |
| |
|
|||||||||||||||| || || ||| | ||||| ||||||||| | | |||||||||||||||||| |||| ||||||||||||||||||| ||||| |
|
|
| T |
23017069 |
caccaaaaggaatgtattcgaagttactccctttatagtcaataccgttgtcaatgaatctctctggataaaacttctctggttcagtccagtagtttgg |
23017168 |
T |
 |
| Q |
108 |
atctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctct |
197 |
Q |
| |
|
|||||| | |||| ||| ||||| | |||||||||| | || ||||||| ||||| || | || |||||||||| ||||||||||| |
|
|
| T |
23017169 |
atctcttgcgattgcccaagcattaattatcaccttagtcttaactggtatgtgataaccatgtatctcacatgctttaccacattctct |
23017258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 82 - 197
Target Start/End: Original strand, 23032780 - 23032895
Alignment:
| Q |
82 |
ctctctggttcagtccagtactttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatg |
181 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||| ||| ||||| ||||||||||||||||| |||||| ||||| || | || ||||||| |
|
|
| T |
23032780 |
ctctctggttcagtccagtagtttggatctcttgcaattgcccaagcattgactatcaccttacttttaattggtatgtgataaccatttatctcacatg |
23032879 |
T |
 |
| Q |
182 |
cttgtccacattctct |
197 |
Q |
| |
|
|||| || |||||||| |
|
|
| T |
23032880 |
cttgaccgcattctct |
23032895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 22941574 - 22941378
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagt |
100 |
Q |
| |
|
||||| |||||||| |||||| |||||||||||||||| || || || | | | || |||| || || || |||| ||| |||||||| ||| ||| | |
|
|
| T |
22941574 |
cttccagcaccaaatggaatgaactcaaaattatttcccttataatctacacaactttcaataaacctttcaggataaaatctctctgggtcatcccaat |
22941475 |
T |
 |
| Q |
101 |
actttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctct |
197 |
Q |
| |
|
||||||||||| ||||| | ||| ||||| |||||||| || ||||| ||||||| |||||| | |||||||||||||||||||||||||| |
|
|
| T |
22941474 |
gatttggatctcttccaatggcccaagcattcactatcactttgcttttaaaaggtatatcatacccatttatttcacatgcttgtccacattctct |
22941378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 22831841 - 22832031
Alignment:
| Q |
7 |
gcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagtactttg |
106 |
Q |
| |
|
||||||||||||||| ||||||||||||| || || ||||| | | | ||| |||||||||| || |||| ||| || ||||| || ||| | |||| |
|
|
| T |
22831841 |
gcaccaaaaggaatgaactcaaaattattacccttatagtccacacaactatcaatgaatctttcaggataaaatctttctgggtcgtcccaatgatttg |
22831940 |
T |
 |
| Q |
107 |
gatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctct |
197 |
Q |
| |
|
||||||| ||||| | ||| ||||| |||||||| || ||||| ||||||| |||||| | || |||||||||| |||||||||||| |
|
|
| T |
22831941 |
gatctcttccaatagcccaagcattcactatcactttgcttttaaaaggtatatcatacccatttatctcacatgcttttccacattctct |
22832031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22986277 - 22986357
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaac |
81 |
Q |
| |
|
||||| |||||||| |||||||||||||||||| |||||||| | |||||||| ||| |||| || ||||| |||| |||| |
|
|
| T |
22986277 |
cttccagcaccaaatggaatgtactcaaaattagttcctttgaaatcaatagaactatcaataaacctctcaggataaaac |
22986357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23032714 - 23032765
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatag |
52 |
Q |
| |
|
||||| |||||||| |||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
23032714 |
cttccggcaccaaagggaatgtactcaaaattacttcctttatagtcaatag |
23032765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 426
Target Start/End: Original strand, 23017377 - 23017490
Alignment:
| Q |
313 |
ctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgtttcacctccagcaccaa |
412 |
Q |
| |
|
|||||||||| ||||||||||||||| | |||||||| ||||| | ||| |||||||||| || |||| | | |||||| ||||||||| |||| | |
|
|
| T |
23017377 |
ctcacttcatcttgtgctttcttcattattcttggattccttatcatttctatcattgcccaatctgtggtgcttgctgatgtctcacctccaccaccga |
23017476 |
T |
 |
| Q |
413 |
tcatgtcctgaaaa |
426 |
Q |
| |
|
|||||||||||| |
|
|
| T |
23017477 |
aaatgtcctgaaaa |
23017490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 22916769 - 22916681
Alignment:
| Q |
103 |
tttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccaca |
191 |
Q |
| |
|
||||||||||| ||||| | ||| ||||| |||||||| || ||||| ||||||| |||||| | |||||||||||||||||||| |
|
|
| T |
22916769 |
tttggatctcttccaatggcccaagcattcactatcactttgcttttaaatggtataccatacccatttatttcacatgcttgtccaca |
22916681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0554 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0554
Description:
Target: scaffold0554; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 426
Target Start/End: Complemental strand, 6754 - 6326
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagt |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||||| |||||||||| ||| || ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
6754 |
cttccagcaccaaaaggaatgtactcaaaattaccccctttatagtcaatagtgctgtcagtgaatctctctggataaaacctctctggttcagtccaga |
6655 |
T |
 |
| Q |
101 |
actttggatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctct--- |
197 |
Q |
| |
|
| ||||||||||| |||||| ||| ||||| | |||||||||||| | ||||| | ||| || | || |||||||||| ||||||||||| |
|
|
| T |
6654 |
agtttggatctcttgcaattgcccaagcattgattatcaccttactcctaaacggtatgttataaccatttatctcacatgctttaccacattctcttgg |
6555 |
T |
 |
| Q |
198 |
aagtaaaagaggagttggagggtgtaaccttagagtctctttcactactaacttcaaatattcgagttcatttatatagttttcaccaacagctcctttc |
297 |
Q |
| |
|
|| |||||||| | ||||||||||||||| || || ||||| || ||| | |||||||| | ||||| | || || |||||| |||| ||| ||| |
|
|
| T |
6554 |
tagcaaaagaggtgctggagggtgtaacctaagggtttctttgacgactgatttcaaataattgagtttgctaatgtaattttcatcaacctttccattc |
6455 |
T |
 |
| Q |
298 |
ttgttgaatatttttctcacttcatattgtgctttcttcatcactcttggatcccttactaactctgccattgcccaaactatggtagtggatgatgttt |
397 |
Q |
| |
|
| || | || || ||| ||| |||||||||| |||| | |||||| ||||||| | ||||||||||||||| ||||||| || | |||||| | |
|
|
| T |
6454 |
aatgtaaaaacttctcgcacctcagcttgtgctttcatcattattcttggctcccttatcatttctgccattgcccaatctatggtggttgctgatgtat |
6355 |
T |
 |
| Q |
398 |
cacctccagcaccaatcatgtcctgaaaa |
426 |
Q |
| |
|
||||||||||||||| ||||||| |||| |
|
|
| T |
6354 |
cacctccagcaccaaaaatgtcctaaaaa |
6326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 7 - 197
Target Start/End: Complemental strand, 5594224 - 5594034
Alignment:
| Q |
7 |
gcaccaaaaggaatgtactcaaaattatttcctttgtagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagtactttg |
106 |
Q |
| |
|
||||||||||||||| ||||||||||||| || || ||||| | | | ||| |||||||||| || |||| ||| || ||||| || ||| | |||| |
|
|
| T |
5594224 |
gcaccaaaaggaatgaactcaaaattattacccttatagtccacacaactatcaatgaatctttcaggataaaatctttctgggtcgtcccaatgatttg |
5594125 |
T |
 |
| Q |
107 |
gatctctaccaattgtccatgcatttactatcaccttacttttggctggtatatgatacccttcaatttcacatgcttgtccacattctct |
197 |
Q |
| |
|
||||||| ||||| | ||| ||||| |||||||| || ||||| ||||||| |||||| | || |||||||||| |||||||||||| |
|
|
| T |
5594124 |
gatctcttccaatagcccaagcattcactatcactttgcttttaaaaggtatatcatacccatttatctcacatgcttttccacattctct |
5594034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7154533 - 7154492
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaattatttcctttg |
42 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7154533 |
cttccagcaccaaaaggaatatactcaaaattatttcctttg |
7154492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 41465854 - 41465802
Alignment:
| Q |
88 |
ggttcagtccagtactttggatctctaccaattgtccatgcatttactatcac |
140 |
Q |
| |
|
|||||| |||| |||||||||||||| ||||| | |||||||||||||||||| |
|
|
| T |
41465854 |
ggttcactccaatactttggatctcttccaatcgcccatgcatttactatcac |
41465802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 2433682 - 2433650
Alignment:
| Q |
1 |
cttcctgcaccaaaaggaatgtactcaaaatta |
33 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
2433682 |
cttcctgcaccaaaaggtatgtactcaaaatta |
2433650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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