View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14336_low_60 (Length: 202)

Name: NF14336_low_60
Description: NF14336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14336_low_60
NF14336_low_60
[»] chr4 (40 HSPs)
chr4 (69-177)||(32528952-32529060)
chr4 (3-70)||(4896387-4896454)
chr4 (6-68)||(51296066-51296128)
chr4 (3-72)||(42915104-42915173)
chr4 (3-62)||(23690348-23690407)
chr4 (5-68)||(37249028-37249091)
chr4 (3-62)||(51389433-51389492)
chr4 (3-69)||(31275263-31275329)
chr4 (5-70)||(1033267-1033332)
chr4 (3-68)||(28480427-28480492)
chr4 (3-68)||(28481301-28481366)
chr4 (3-68)||(28482176-28482241)
chr4 (3-72)||(36408089-36408158)
chr4 (3-72)||(36413212-36413281)
chr4 (3-71)||(55927101-55927169)
chr4 (11-68)||(15596521-15596578)
chr4 (3-68)||(16004216-16004280)
chr4 (5-62)||(39844153-39844210)
chr4 (5-69)||(30778152-30778216)
chr4 (3-70)||(31240765-31240833)
chr4 (3-71)||(31658036-31658104)
chr4 (3-70)||(48372112-48372180)
chr4 (5-68)||(5234360-5234423)
chr4 (3-70)||(46173654-46173721)
chr4 (5-62)||(24772790-24772847)
chr4 (3-71)||(36792449-36792518)
chr4 (3-72)||(51717169-51717238)
chr4 (3-47)||(9162183-9162227)
chr4 (24-72)||(25476759-25476807)
chr4 (27-70)||(32408356-32408399)
chr4 (5-72)||(36512961-36513028)
chr4 (3-68)||(1580171-1580237)
chr4 (5-59)||(5123488-5123542)
chr4 (3-72)||(39241187-39241257)
chr4 (10-69)||(53091114-53091177)
chr4 (3-68)||(38844379-38844444)
chr4 (3-72)||(47998711-47998779)
chr4 (5-68)||(2613505-2613569)
chr4 (3-71)||(4577681-4577749)
chr4 (5-68)||(15515903-15515967)
[»] chr7 (29 HSPs)
chr7 (3-72)||(48866815-48866884)
chr7 (3-69)||(30180624-30180690)
chr7 (3-68)||(37856070-37856135)
chr7 (3-69)||(33684797-33684863)
chr7 (3-72)||(8792485-8792551)
chr7 (3-70)||(34348914-34348981)
chr7 (6-68)||(10591272-10591334)
chr7 (3-68)||(12142001-12142066)
chr7 (3-68)||(44894363-44894428)
chr7 (3-62)||(7077648-7077707)
chr7 (11-69)||(41966453-41966511)
chr7 (1-47)||(43025922-43025968)
chr7 (3-68)||(5978696-5978761)
chr7 (3-68)||(21752775-21752840)
chr7 (3-68)||(21858864-21858929)
chr7 (5-70)||(37351877-37351942)
chr7 (3-72)||(46651789-46651858)
chr7 (5-69)||(6353849-6353912)
chr7 (5-68)||(40717127-40717191)
chr7 (3-70)||(45607141-45607208)
chr7 (3-68)||(2790294-2790360)
chr7 (5-71)||(43445526-43445592)
chr7 (3-68)||(5378744-5378809)
chr7 (3-56)||(12102610-12102663)
chr7 (3-68)||(25887700-25887765)
chr7 (7-67)||(32315947-32316008)
chr7 (5-62)||(32933666-32933723)
chr7 (3-67)||(21839023-21839087)
chr7 (3-62)||(37392160-37392220)
[»] chr6 (15 HSPs)
chr6 (3-71)||(1897803-1897871)
chr6 (3-71)||(2582779-2582847)
chr6 (3-62)||(32457147-32457206)
chr6 (3-72)||(16336955-16337024)
chr6 (3-68)||(32853033-32853098)
chr6 (3-72)||(34021057-34021126)
chr6 (5-71)||(30906549-30906615)
chr6 (5-70)||(31517067-31517132)
chr6 (3-71)||(32253897-32253966)
chr6 (5-72)||(21857454-21857521)
chr6 (3-72)||(9954665-9954735)
chr6 (5-70)||(31480723-31480788)
chr6 (13-73)||(15722386-15722446)
chr6 (3-67)||(24752348-24752412)
chr6 (12-68)||(31255350-31255406)
[»] scaffold0057 (1 HSPs)
scaffold0057 (3-68)||(38996-39061)
[»] chr8 (33 HSPs)
chr8 (5-68)||(5359457-5359520)
chr8 (3-69)||(37524316-37524382)
chr8 (14-73)||(26294304-26294363)
chr8 (14-73)||(26307561-26307620)
chr8 (3-71)||(23258149-23258217)
chr8 (3-68)||(7678849-7678914)
chr8 (3-70)||(40413250-40413317)
chr8 (3-69)||(21273598-21273664)
chr8 (3-72)||(41344554-41344623)
chr8 (3-62)||(38128421-38128480)
chr8 (3-62)||(44672128-44672187)
chr8 (3-71)||(295663-295731)
chr8 (3-39)||(22767247-22767283)
chr8 (3-70)||(42543367-42543435)
chr8 (3-70)||(3989022-3989089)
chr8 (3-58)||(22852738-22852793)
chr8 (3-62)||(28927798-28927857)
chr8 (23-70)||(43403921-43403968)
chr8 (3-69)||(1179493-1179559)
chr8 (3-61)||(28473441-28473499)
chr8 (3-68)||(37101574-37101640)
chr8 (3-40)||(426218-426255)
chr8 (5-69)||(10344447-10344512)
chr8 (3-68)||(40102140-40102205)
chr8 (5-69)||(9738581-9738645)
chr8 (6-62)||(12668752-12668808)
chr8 (14-62)||(18538506-18538554)
chr8 (7-62)||(20284828-20284884)
chr8 (7-62)||(21071457-21071513)
chr8 (3-59)||(24503034-24503090)
chr8 (3-70)||(30925541-30925608)
chr8 (5-72)||(34474070-34474137)
chr8 (3-62)||(42689902-42689959)
[»] chr5 (28 HSPs)
chr5 (3-62)||(28811545-28811604)
chr5 (3-72)||(2117525-2117594)
chr5 (3-70)||(20719902-20719969)
chr5 (3-69)||(11306813-11306879)
chr5 (3-68)||(39595391-39595456)
chr5 (3-61)||(34767313-34767371)
chr5 (3-67)||(125209-125273)
chr5 (3-71)||(33567125-33567193)
chr5 (3-62)||(4834924-4834983)
chr5 (3-68)||(10232616-10232682)
chr5 (11-72)||(19127249-19127310)
chr5 (3-68)||(24431507-24431572)
chr5 (3-70)||(5130264-5130332)
chr5 (3-62)||(12661841-12661901)
chr5 (3-74)||(33243624-33243695)
chr5 (14-72)||(9403641-9403699)
chr5 (3-69)||(19376020-19376086)
chr5 (7-61)||(43482486-43482540)
chr5 (3-70)||(11767877-11767944)
chr5 (3-74)||(12718263-12718334)
chr5 (3-62)||(31284289-31284348)
chr5 (3-62)||(34381129-34381188)
chr5 (3-69)||(40566104-40566171)
chr5 (3-69)||(27392590-27392656)
chr5 (3-71)||(91332-91400)
chr5 (27-67)||(12349926-12349966)
chr5 (3-62)||(23991348-23991408)
chr5 (24-71)||(43214085-43214133)
[»] chr3 (31 HSPs)
chr3 (3-69)||(47849787-47849853)
chr3 (3-68)||(29706020-29706085)
chr3 (3-72)||(52727333-52727402)
chr3 (4-68)||(34733183-34733247)
chr3 (3-73)||(11173567-11173637)
chr3 (3-70)||(20380776-20380843)
chr3 (3-70)||(46473245-46473312)
chr3 (3-70)||(32687846-32687914)
chr3 (3-62)||(19418055-19418114)
chr3 (3-62)||(49130971-49131030)
chr3 (3-69)||(7231894-7231960)
chr3 (3-70)||(34271373-34271442)
chr3 (3-69)||(41111960-41112026)
chr3 (7-62)||(53715436-53715492)
chr3 (5-71)||(31997921-31997988)
chr3 (3-70)||(37303500-37303567)
chr3 (3-68)||(46315844-46315909)
chr3 (3-39)||(5188353-5188389)
chr3 (3-74)||(6126571-6126643)
chr3 (3-68)||(32457642-32457709)
chr3 (3-59)||(37215129-37215185)
chr3 (7-62)||(44127086-44127142)
chr3 (3-73)||(55344179-55344250)
chr3 (23-69)||(46953086-46953132)
chr3 (3-40)||(27198071-27198108)
chr3 (3-68)||(28300535-28300600)
chr3 (3-68)||(37302963-37303028)
chr3 (3-68)||(41957630-41957695)
chr3 (23-72)||(51973393-51973442)
chr3 (5-68)||(35272146-35272210)
chr3 (8-71)||(51650478-51650542)
[»] chr2 (31 HSPs)
chr2 (3-68)||(29795553-29795618)
chr2 (3-62)||(36435798-36435857)
chr2 (3-69)||(39454135-39454201)
chr2 (5-62)||(6365305-6365362)
chr2 (3-71)||(3091858-3091926)
chr2 (3-71)||(36133091-36133159)
chr2 (3-62)||(11164271-11164330)
chr2 (5-68)||(34442232-34442295)
chr2 (3-71)||(13711178-13711246)
chr2 (3-62)||(12600165-12600224)
chr2 (3-68)||(14714103-14714168)
chr2 (3-71)||(22390269-22390337)
chr2 (3-62)||(25801706-25801765)
chr2 (3-70)||(42251807-42251874)
chr2 (3-69)||(2013173-2013239)
chr2 (10-72)||(44189949-44190011)
chr2 (3-71)||(8555177-8555246)
chr2 (3-68)||(14140228-14140293)
chr2 (3-68)||(23344878-23344943)
chr2 (5-74)||(43650430-43650499)
chr2 (23-71)||(2464274-2464322)
chr2 (3-71)||(32750115-32750183)
chr2 (3-71)||(36376737-36376805)
chr2 (7-62)||(37631261-37631317)
chr2 (5-53)||(39285972-39286020)
chr2 (3-70)||(13104596-13104663)
chr2 (3-69)||(42081154-42081220)
chr2 (3-68)||(11229210-11229275)
chr2 (3-72)||(23045278-23045347)
chr2 (3-72)||(31296728-31296797)
chr2 (5-69)||(12962505-12962569)
[»] scaffold0026 (1 HSPs)
scaffold0026 (3-69)||(113742-113808)
[»] chr1 (27 HSPs)
chr1 (3-68)||(40610346-40610411)
chr1 (3-71)||(49453597-49453662)
chr1 (3-72)||(22389411-22389479)
chr1 (3-58)||(36418196-36418251)
chr1 (3-69)||(46948096-46948162)
chr1 (3-68)||(2362486-2362551)
chr1 (3-70)||(50659079-50659146)
chr1 (5-47)||(5477073-5477115)
chr1 (5-71)||(15466866-15466932)
chr1 (5-62)||(32966386-32966444)
chr1 (3-69)||(39010931-39010997)
chr1 (3-71)||(14002627-14002696)
chr1 (14-71)||(43755572-43755629)
chr1 (3-47)||(37690532-37690576)
chr1 (10-62)||(51571550-51571602)
chr1 (3-62)||(31290103-31290162)
chr1 (3-69)||(30631733-30631799)
chr1 (3-68)||(31480023-31480089)
chr1 (14-68)||(33676029-33676083)
chr1 (5-62)||(29300496-29300553)
chr1 (5-62)||(50061871-50061928)
chr1 (7-62)||(21255679-21255735)
chr1 (3-59)||(28253132-28253188)
chr1 (14-70)||(31427844-31427900)
chr1 (3-62)||(43640881-43640941)
chr1 (3-74)||(48872834-48872905)
chr1 (3-59)||(50141833-50141889)
[»] scaffold0076 (1 HSPs)
scaffold0076 (3-47)||(11309-11353)
[»] scaffold0036 (1 HSPs)
scaffold0036 (3-70)||(18121-18187)
[»] scaffold0115 (1 HSPs)
scaffold0115 (15-70)||(15076-15131)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-61)||(6544-6602)
[»] scaffold0508 (1 HSPs)
scaffold0508 (3-72)||(11421-11490)
[»] scaffold0501 (1 HSPs)
scaffold0501 (3-59)||(10414-10470)


Alignment Details
Target: chr4 (Bit Score: 109; Significance: 5e-55; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 32529060 - 32528952
Alignment:
Q  69 ttttatgtttggttgatttacaaattcatattatcatatagatagacataaatattgtgtgaataaataatgtttaaatgtcaagcagcatacagatctt 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32529060 ttttatgtttggttgatttacaaattcatattatcatatagatagacataaatattgtgtgaataaataatgtttaaatgtcaagcagcatacagatctt 32528961  T
Q  169 gcaccctaa 177  Q
    |||||||||    
T  32528960 gcaccctaa 32528952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 4896454 - 4896387
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4896454 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactctt 4896387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 51296128 - 51296066
Alignment:
Q  6 aaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  51296128 aaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactactc 51296066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 42915173 - 42915104
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  42915173 tgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactctttt 42915104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 23690348 - 23690407
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  23690348 tgaaaagagagaaaaaagatattgtcacaaaaattgtttcaaatagatgttcaaatatca 23690407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 37249028 - 37249091
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||| |||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  37249028 aaaatagagaaaaaagaggttatctcaaaagttgtttcaaatagatgttcaaatatcattactc 37249091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 51389433 - 51389492
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| | |||||||||||||    
T  51389433 tgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatca 51389492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 31275263 - 31275329
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | ||||||||||||| ||||||    
T  31275263 tgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactct 31275329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 1033267 - 1033332
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    |||| |||||||||||| ||||||||||||||||||| |||| | ||||||||||||| |||||||    
T  1033267 aaaaaagagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactctt 1033332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 28480492 - 28480427
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||| |||||| |||||||||| |||||| |||||||| ||||||||||||| |||||    
T  28480492 tgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactc 28480427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 28481366 - 28481301
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||| |||||| |||||||||| |||||| |||||||| ||||||||||||| |||||    
T  28481366 tgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactc 28481301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 28482241 - 28482176
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||| |||||| |||||||||| |||||| |||||||| ||||||||||||| |||||    
T  28482241 tgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactc 28482176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 36408158 - 36408089
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||| ||||||||  |||||||||||||||| |||||||| |||||||||||||  ||||||||    
T  36408158 tgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatagttgttcaaatatcaccactctttt 36408089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 36413281 - 36413212
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||| ||||||||  |||||||||||||||| |||||||| |||||||||||||  ||||||||    
T  36413281 tgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatagttgttcaaatatcaccactctttt 36413212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 55927101 - 55927169
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||||||||| ||||||  ||||||||||| |||| |||||| ||||||||||||||| ||||||||    
T  55927101 tgaaaagagagagaaaagaaattgtcacaaaaattgtctcaaatggatgttcaaatatcactactcttt 55927169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 15596521 - 15596578
Alignment:
Q  11 gagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||| ||||||||||||||||||| |||| | ||||||||||||| |||||    
T  15596521 gagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactc 15596578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 16004280 - 16004216
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||||| || ||||||||| |||||| |||||| ||||||||||||||| |||||    
T  16004280 tgaaaagagagaaaaaaaag-ttgtcacaagagttgtctcaaatggatgttcaaatatcactactc 16004216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 39844210 - 39844153
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    ||||||||||||||||| ||||| | ||||||||| |||| |||||||||||||||||    
T  39844210 aaaagagagaaaaaagaagttgttaaaaaagttgtctcaattagatgttcaaatatca 39844153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 30778216 - 30778152
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||||||||||||||  |||||| ||||||| | |||||||| ||||||||||||| ||||||    
T  30778216 aaaagagagaaaaaagaaattgtcataaaagttatatcaaatagttgttcaaatatcattactct 30778152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 31240765 - 31240833
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||||| ||||||| |||||||||| | |||| | ||||||||||||| |||||||    
T  31240765 tgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactctt 31240833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 31658036 - 31658104
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    ||||||| ||||||||||| ||||||||||||| ||| |||||| | ||||||||||||  ||||||||    
T  31658036 tgaaaagtgagaaaaaagaagttgtcacaaaagctgtatcaaatggttgttcaaatatcgctactcttt 31658104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 48372180 - 48372112
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||||| |||||||| |||| |||| | |||||| ||||||||||||| |||||||    
T  48372180 tgaaaagagagaaaaaagaagttgtcactaaaaattgtatgaaatagttgttcaaatatcactactctt 48372112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 5234423 - 5234360
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||| |  |||||||||||||||| |||||| | ||||||||||||| |||||    
T  5234423 aaaagagagaaaaaaaaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 5234360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 46173654 - 46173721
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    |||||||||| ||||||||  |||||||||||||||| |||||| | | ||||||||||| |||||||    
T  46173654 tgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatggttattcaaatatcattactctt 46173721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 24772790 - 24772847
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||| ||||||  ||||||||| |||||| |||||| |||||||||||||||    
T  24772790 aaaagagagagaaaagaaattgtcacaagagttgtctcaaatggatgttcaaatatca 24772847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 36792449 - 36792518
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||||||||| |||||| |||||||| ||||||||| | |||| | ||||||||||||| ||||||||    
T  36792449 tgaaaagagagagaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactcttt 36792518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 51717238 - 51717169
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||||||||||||  |||||||| ||||||| ||| ||   ||||||||||||| |||||||||    
T  51717238 tgaaaagagagaaaaaagaaattgtcacataagttgtctcatatgattgttcaaatatcactactctttt 51717169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 9162183 - 9162227
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 47  Q
    ||||||||||||||||||| |||||||||||| |||| |||||||    
T  9162183 tgaaaagagagaaaaaagaagttgtcacaaaaattgtatcaaata 9162227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 25476759 - 25476807
Alignment:
Q  24 ttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||| ||||||| |||||| ||||||||||||||| |||||||||    
T  25476759 ttgtcacagaagttgtctcaaatggatgttcaaatatcattactctttt 25476807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 32408399 - 32408356
Alignment:
Q  27 tcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  32408399 tcacaaaagttatttcaaattgatgttcaaatatcactactctt 32408356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 36512961 - 36513028
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||| |||||| |||||||||| | |||| |||||| ||| ||||||||||| | |||||||    
T  36512961 aaaagagagagaaaagaagttgtcacaagaattgtctcaaatggattttcaaatatcattgctctttt 36513028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 1580237 - 1580171
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||||| | |||||||| ||||||||| | |||| | ||||||||||||| |||||    
T  1580237 tgaaaagagagaaaaaaaaagttgtcacaaaaagttgtatgaaatggttgttcaaatatcactactc 1580171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 5123542 - 5123488
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 59  Q
    ||||||||||||||| | ||||||||||||||||| ||| || | ||||||||||    
T  5123542 aaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 5123488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 39241257 - 39241187
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||||| |||| | ||||||| |||||||||| |||||| | |||| |||||||| |||||||||    
T  39241257 tgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactctttt 39241187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 53091177 - 53091114
Alignment:
Q  10 agagaaaaaagaggttgtcacaaaagttgtttcaaataga----tgttcaaatatcaatactct 69  Q
    |||||||||||| ||||||||||||||||| |||||| ||    ||||||||||||| ||||||    
T  53091177 agagaaaaaagaagttgtcacaaaagttgtatcaaatggatggttgttcaaatatcactactct 53091114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 38844444 - 38844379
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||| |||| | ||||||||||||||||| ||| || | |||||||||| || |||||    
T  38844444 tgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacattactc 38844379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 47998711 - 47998779
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||| |||||||| || || ||||||||||||| ||||||   ||||||||||||| |||||||||    
T  47998711 tgaaaagaaagaaaaaaaag-ttatcacaaaagttgtatcaaatgattgttcaaatatcactactctttt 47998779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 2613569 - 2613505
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||| |||  || ||||||||||||||||| |||||| | ||||||||||||| |||||    
T  2613569 aaaagagagagaaagtagattgtcacaaaagttgttatcaaatggttgttcaaatatcattactc 2613505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 4577681 - 4577749
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    ||||||||||| | ||  |||||||| ||||||||||  |||| || ||||||||||||| ||||||||    
T  4577681 tgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaagttgttcaaatatcattactcttt 4577749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 15515903 - 15515967
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgttt-caaatagatgttcaaatatcaatactc 68  Q
    ||||| ||||||||  |||||||||  |||||||||| |||||||||||||| |||||| |||||    
T  15515903 aaaagtgagaaaaacaaggttgtcatcaaagttgttttcaaatagatgttcatatatcactactc 15515967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 2e-29; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 48866884 - 48866815
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  48866884 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactctttt 48866815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 30180624 - 30180690
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  30180624 tgaaaagagagaaaaaagaggttgtcgcaaaaattgtttcaaatagatgttcaaatatcactactct 30180690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 37856135 - 37856070
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||| |||||    
T  37856135 tgaaaagagagaaaaaagagattatcacaaaagttgtttcaaatagatgtttaaatatcactactc 37856070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 33684797 - 33684863
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||| |||||||||| || ||||||    
T  33684797 tgaaaagatagaaaaaagaagttgtcacaaaagttgtttcatatagttgttcaaataacactactct 33684863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 8792551 - 8792485
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    ||||||||||||||||||   |||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  8792551 tgaaaagagagaaaaaag---ttgtcacaaaagttgtatcaaatggttgttcaaatatcattactctttt 8792485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 34348981 - 34348914
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    |||||||||||| |||||| ||||| | ||||||||| | |||||||||||||||||||| |||||||    
T  34348981 tgaaaagagagagaaaagaagttgttaaaaaagttgtatgaaatagatgttcaaatatcactactctt 34348914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 10591272 - 10591334
Alignment:
Q  6 aaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||| ||||||||||| ||||||||||||||||| |||||| | ||||||||||||| |||||    
T  10591272 aaagtgagaaaaaagaagttgtcacaaaagttgtctcaaatggttgttcaaatatcactactc 10591334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 12142001 - 12142066
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||| |||||||| | ||||||||||||||||| |||||| | ||||||||||||| |||||    
T  12142001 tgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 12142066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 44894428 - 44894363
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||| |||||| |||||||||||| || | |||||| ||||||||||||||| |||||    
T  44894428 tgaaaagagagataaaagaagttgtcacaaaaattatctcaaatggatgttcaaatatcactactc 44894363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 7077707 - 7077648
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    ||||||| ||| ||||| | ||||||||||||||||||| |||||| |||||||||||||    
T  7077707 tgaaaagtgaggaaaaaaaagttgtcacaaaagttgtttaaaatagttgttcaaatatca 7077648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 41966453 - 41966511
Alignment:
Q  11 gagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    ||||||||||| ||||||| |||| |||||| |||||| ||||||||||||| ||||||    
T  41966453 gagaaaaaagaagttgtcataaaaattgtttaaaatagttgttcaaatatcactactct 41966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43025922 - 43025968
Alignment:
Q  1 attgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 47  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  43025922 attgaaaagagagaaaaaagaagttgttacaaaagttgtatcaaata 43025968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 5978696 - 5978761
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||| ||| |||||||||| |||||| ||| || | ||||||||||||| |||||    
T  5978696 tgaaaagagagaaaatagaagttgtcacaagagttgtatcatatggttgttcaaatatcactactc 5978761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 21752775 - 21752840
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||||| |  |||||||||||||||||||| || | |||||||||| || |||||    
T  21752775 tgaaaagagagaaaaaataaattgtcacaaaagttgtttcatattgttgttcaaataacactactc 21752840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 21858864 - 21858929
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||| || |||||||| ||| ||||||||||||||| |||| | ||||||||||||| |||||    
T  21858864 tgaaaagtgaaaaaaaagaagttatcacaaaagttgtttaaaatggttgttcaaatatcactactc 21858929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 37351942 - 37351877
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    |||||||||||||||||  |||||||||||||| | ||||||   ||||||||||||| |||||||    
T  37351942 aaaagagagaaaaaagaaattgtcacaaaagttatatcaaatgattgttcaaatatcactactctt 37351877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 46651789 - 46651858
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    ||||||||||||||| ||| |||||||||| | |||| ||| || | ||||||||||||| |||||||||    
T  46651789 tgaaaagagagaaaatagaagttgtcacaagaattgtatcatatggttgttcaaatatcactactctttt 46651858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 6353849 - 6353912
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||||| ||||||||  |||||||||||||||| |||||||| | ||||||||||| ||||||    
T  6353849 aaaagaga-aaaaaagaaattgtcacaaaagttgtatcaaatagtttttcaaatatcactactct 6353912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 40717191 - 40717127
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||||| |||||||| ||||||||| | |||| | ||||||||||||| |||||    
T  40717191 aaaagagagaaaaaagaagttgtcacaaaaagttgtatgaaatggttgttcaaatatcactactc 40717127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 45607141 - 45607208
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||| ||||||||||| |||||  |||||||| | | |||||| ||||||||||||| |||||||    
T  45607141 tgaaaagtgagaaaaaagaagttgtaccaaaagttatctaaaatagttgttcaaatatcactactctt 45607208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 2790294 - 2790360
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat-agatgttcaaatatcaatactc 68  Q
    |||||||||||| |||||| ||||||||| ||||||| | |||| || ||||||||||||| |||||    
T  2790294 tgaaaagagagagaaaagaagttgtcacataagttgtctaaaatgagttgttcaaatatcactactc 2790360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 43445526 - 43445592
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||| ||||||||||  ||||||||||| |||| ||||||   ||||||||||||| ||||||||    
T  43445526 aaaagaaagaaaaaagaaattgtcacaaaaattgtatcaaatgattgttcaaatatcactactcttt 43445592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 5378744 - 5378809
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||| ||||||  |||| | ||||||||| |||||| |||||| |||||||| |||||    
T  5378744 tgaaaagagagagaaaagaaattgttaaaaaagttgtctcaaatggatgtttaaatatcactactc 5378809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 12102663 - 12102610
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaa 56  Q
    ||||||||||||||||| | ||||||||||||||||| | |||| | |||||||    
T  12102663 tgaaaagagagaaaaaataagttgtcacaaaagttgtctgaaatggttgttcaa 12102610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 25887700 - 25887765
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||| ||||||||||| |||||  |||||||||| | |||| | ||||||||||||| |||||    
T  25887700 tgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactc 25887765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 32315947 - 32316008
Alignment:
Q  7 aagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcaatact 67  Q
    ||||||||||||  | |||||||||||||||||  |||||||| ||||||||||||| ||||    
T  32315947 aagagagaaaaacaatgttgtcacaaaagttgtcgtcaaatagttgttcaaatatcattact 32316008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 32933666 - 32933723
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||| ||| ||||||||  |||||||||||||||| |||||||  |||||||||||||    
T  32933666 aaaatagaaaaaaaagaaattgtcacaaaagttgtatcaaataattgttcaaatatca 32933723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 21839087 - 21839023
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatact 67  Q
    |||||| |||||||||| |  |||| |||||| |||| |||||||| ||||||||||||| ||||    
T  21839087 tgaaaaaagagaaaaaataaattgttacaaaaattgtatcaaatagttgttcaaatatcactact 21839023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 37392160 - 37392220
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 62  Q
    |||||||||||||||| ||||||||||  |||||||||  ||||| | |||||||||||||    
T  37392160 tgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatca 37392220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 9e-29; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 1897803 - 1897871
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1897803 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactcttt 1897871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 2582779 - 2582847
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  2582779 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaccactcttt 2582847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 32457206 - 32457147
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  32457206 tgaaaaaagagaaaaaagaggttatcacaaaatttgtttcaaatagatgtttaaatatca 32457147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 16337024 - 16336955
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||||| || ||| |||||||||| |||||| |||||| ||||||||||||||| |||||||||    
T  16337024 tgaaaagagagagaatagaagttgtcacaagagttgtctcaaatggatgttcaaatatcattactctttt 16336955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 32853098 - 32853033
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||| |||||||||||| |||||||||||| |||| |||||||| ||||||||||||| |||||    
T  32853098 tgaaaaaagagaaaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatcactactc 32853033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 34021126 - 34021057
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||||| |||||| ||||| | ||||||||| |||||| ||||||||||||||| |||||||||    
T  34021126 tgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 34021057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 30906615 - 30906549
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||||||| ||||||  |||||| || ||||||||||||| ||||||||||||||| ||||||||    
T  30906615 aaaagagagagaaaagaaattgtcataagagttgtttcaaatggatgttcaaatatcactactcttt 30906549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 31517132 - 31517067
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||| ||||||||| ||||||| |||  ||| |||||||||| || |||||||    
T  31517132 aaaagagagaaaaaagaagttgtcacataagttgtctcatttagttgttcaaataacactactctt 31517067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 32253897 - 32253966
Alignment:
Q  3 tgaaaagagaga-aaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||||||||| ||||| |  ||||||||||||||||  ||||||| ||||||||||||| ||||||||    
T  32253897 tgaaaagagagagaaaaaaaaattgtcacaaaagttgtaccaaatagttgttcaaatatcactactcttt 32253966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 21857521 - 21857454
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    ||||||||||||||||| ||||||| |||| |||| ||| |||| | ||||||||||| |||| ||||    
T  21857521 aaaagagagaaaaaagaagttgtcataaaaattgtctcatatagttattcaaatatcactactatttt 21857454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 9954665 - 9954735
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||||||| |||| ||||||| |||||||||| | |||| | ||||||||||||| | |||||||    
T  9954665 tgaaaagagagaaagaagaagttgtcaccaaaagttgtattaaatggttgttcaaatatcactcctctttt 9954735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 31480788 - 31480723
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||| ||||||||| || |||| |||  ||| |||||||||| || |||||||    
T  31480788 aaaagagagaaaaaagaagttgtcacataaattgtctcatttagttgttcaaataacactactctt 31480723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 15722446 - 15722386
Alignment:
Q  13 gaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttta 73  Q
    ||||||| | |||||||  |||||| | | |||||| ||||||||||||||||||||||||    
T  15722446 gaaaaaaaaagttgtcattaaagttatctaaaatagttgttcaaatatcaatactctttta 15722386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 24752348 - 24752412
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatact 67  Q
    ||||||| ||||||||||| |||||  |||||||||| | |||| | ||||||||||||| ||||    
T  24752348 tgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactact 24752412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 31255406 - 31255350
Alignment:
Q  12 agaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||| ||||||| |||||||||||||||| | || |||||||  |||||||    
T  31255406 agaaaaaagaagttgtcataaaagttgtttcaaatggttgatcaaataaaaatactc 31255350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 38996 - 39061
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  38996 tgaaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactactc 39061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 5359457 - 5359520
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  5359457 aaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactactc 5359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 37524382 - 37524316
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  37524382 tgaaaagagagaaaaaagaggttgtcacaaaggttatttcaaatagatgttcaaatatcactactct 37524316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 26294304 - 26294363
Alignment:
Q  14 aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttta 73  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  26294304 aaaaaagaggttgtcacaaaagttgtttcaaatatatgttcaaatatcactactctttta 26294363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 26307561 - 26307620
Alignment:
Q  14 aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttta 73  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  26307561 aaaaaagaggttgtcacaaaagttgtttcaaatatatgttcaaatatcactactctttta 26307620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 23258149 - 23258217
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||||||| ||||||||    
T  23258149 tgaaaagagagaaaaaagaagttgtcacaaaaattgtttcaaatggttgttcaaatatcactactcttt 23258217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 7678849 - 7678914
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||||||| |||||    
T  7678849 tgaaaagagagaaaaaagaagttgttacaaaagttgtatcaaatagttgttcaaatatcattactc 7678914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 40413317 - 40413250
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||||| ||| ||| ||||||||| |||||| | ||||||||||||| |||||||    
T  40413317 tgaaaagagagaaaaaagaagttatcataaaagttgtatcaaatggttgttcaaatatcactactctt 40413250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 21273664 - 21273598
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    ||||||||||||||| | | ||||||||||||||||| | |||||| ||||||||||||| ||||||    
T  21273664 tgaaaagagagaaaagaaaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactactct 21273598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 41344623 - 41344554
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||||| |||||| ||| ||| || |||||| |||||| ||||||||||||||| |||||||||    
T  41344623 tgaaaagagagagaaaagaagttatcataagagttgtctcaaatggatgttcaaatatcactactctttt 41344554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 38128480 - 38128421
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    ||||||| ||||||||||| |||||||||||| |||||| |||| | |||||||||||||    
T  38128480 tgaaaagtgagaaaaaagaagttgtcacaaaaattgtttaaaatggttgttcaaatatca 38128421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 44672187 - 44672128
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||||||||||||   ||||||||||||||| |||||||  |||||||||||||    
T  44672187 tgaaaagagagaaaaaagaatgtgtcacaaaagttgtatcaaataattgttcaaatatca 44672128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 295663 - 295731
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||| |||||||||| |  |||||||||||||| | |||||||| |||||||||| || ||||||||    
T  295663 tgaaaatagagaaaaaataaattgtcacaaaagttatctcaaatagttgttcaaataacactactcttt 295731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 22767247 - 22767283
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgt 39  Q
    ||||||||||||||||||| |||||||||||||||||    
T  22767247 tgaaaagagagaaaaaagaagttgtcacaaaagttgt 22767283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 42543435 - 42543367
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||||| ||||||| |||||||||| | |||| | ||||||| ||||| |||||||    
T  42543435 tgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaattatcactactctt 42543367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 3989022 - 3989089
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||||| ||||||||| ||||||| |||  | | |||||||||| || |||||||    
T  3989022 tgaaaagagagaaaaaagaagttgtcacataagttgtctcatttggttgttcaaataacactactctt 3989089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 22852793 - 22852738
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaat 58  Q
    ||||||| |||||||||||  ||||||||||| |||||| |||||| |||||||||    
T  22852793 tgaaaagtgagaaaaaagaaattgtcacaaaaattgtttaaaatagttgttcaaat 22852738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 28927798 - 28927857
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||||| |||||| |||||||||||| || | |||||| | |||||||||||||    
T  28927798 tgaaaagagagagaaaagaagttgtcacaaaaattttatcaaatggttgttcaaatatca 28927857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 43403921 - 43403968
Alignment:
Q  23 gttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    |||||||| |||||||| |||||||| ||||||||||||| |||||||    
T  43403921 gttgtcacgaaagttgtctcaaatagttgttcaaatatcactactctt 43403968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 1179493 - 1179559
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||| ||| |||||| | ||||||||||||||| | |||||||| |||| |||||||| ||||||    
T  1179493 tgaaaaaagaaaaaaaaaaagttgtcacaaaagttatatcaaatagttgtttaaatatcactactct 1179559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 28473499 - 28473441
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatc 61  Q
    ||||||||||||||||||| ||||| | |||| |||| |||| || |||||||||||||    
T  28473499 tgaaaagagagaaaaaagaagttgttaaaaaaattgtctcaattaaatgttcaaatatc 28473441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 37101640 - 37101574
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||||||| |||||||| |||| |||| | |||| | ||||||||||||| |||||    
T  37101640 tgaaaagagagaaaaaagaagttgtcacgaaaaattgtatgaaatggttgttcaaatatcactactc 37101574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 426218 - 426255
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtt 40  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  426218 tgaaaagagagaaaaaagaagttgtcacataagttgtt 426255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 10344447 - 10344512
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatcaatactct 69  Q
    |||||| |||||||  ||||||||| |||||||||| |||||||||||| || |||||| ||||||    
T  10344447 aaaagaaagaaaaacaaggttgtcataaaagttgttatcaaatagatgtacatatatcactactct 10344512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 40102140 - 40102205
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||| |||| | ||||||||||||||||| ||| || | |||||||||| || |||||    
T  40102140 tgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactc 40102205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 9738645 - 9738581
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||| ||||||||||||  |||||||||||||| | ||| |||| ||||||||||  ||||||||    
T  9738645 aaaaaagagaaaaaagaaattgtcacaaaagttatctcatatagctgttcaaataataatactct 9738581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 12668808 - 12668752
Alignment:
Q  6 aaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    ||||||||||||   | ||||||||||||||| |||||| ||| |||||||||||||    
T  12668808 aaagagagaaaatgaaagttgtcacaaaagttttttcaattagttgttcaaatatca 12668752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 18538506 - 18538554
Alignment:
Q  14 aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||| ||||||||||||||||   ||||||| |||||||||||||    
T  18538506 aaaaaagaagttgtcacaaaagttgaaccaaatagttgttcaaatatca 18538554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 20284828 - 20284884
Alignment:
Q  7 aagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatca 62  Q
    ||||||||||||  |||||||||||||||||||  |||||| | |||||||||||||    
T  20284828 aagagagaaaaagaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatca 20284884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 21071457 - 21071513
Alignment:
Q  7 aagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatca 62  Q
    ||||||||||||  |||||||||||||||||||  |||||| | |||||||||||||    
T  21071457 aagagagaaaaagaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatca 21071513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 24503034 - 24503090
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 59  Q
    |||||||||||||||| || ||||||| ||||||||| |||||| | | ||||||||    
T  24503034 tgaaaagagagaaaaatgaagttgtcataaaagttgtctcaaatggttattcaaata 24503090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 30925608 - 30925541
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||| || ||||||| ||||||||| | |||| | ||||||||||||| |||||||    
T  30925608 tgaaaagagagaaaaaaaag-ttgtcaccaaaagttgtataaaatggttgttcaaatatcactactctt 30925541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 34474070 - 34474137
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||||||| || |||||||| ||||||||| | |||| | ||||||||||||| |||||||||    
T  34474070 aaaagagagaaaaa-gaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcattactctttt 34474137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 42689902 - 42689959
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||||||||||||  |||||||||||||  |  ||||||| |||||||||||||    
T  42689902 tgaaaagagagaaaaaagaaattgtcacaaaagt--taacaaatagttgttcaaatatca 42689959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 28811545 - 28811604
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28811545 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatattcaaatatca 28811604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 2117594 - 2117525
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  2117594 tgaaaaaagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactctttt 2117525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 20719969 - 20719902
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    |||||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  20719969 tgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactactctt 20719902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 11306813 - 11306879
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||| ||||||    
T  11306813 tgaaaagagagaaaaaagaagttgtctcaaaagttgtatcaaatagttgttcaaatatcactactct 11306879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 39595391 - 39595456
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||| |||||    
T  39595391 tgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcattactc 39595456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 34767371 - 34767313
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatc 61  Q
    |||||||||||| |||||| |||||||||| |||||| |||||||||||||||||||||    
T  34767371 tgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatagatgttcaaatatc 34767313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 125209 - 125273
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatact 67  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| | ||||||||||||| ||||    
T  125209 tgaaaagagagaaaaaagaagttgtcgcaaaagttgtatcaaatggttgttcaaatatcactact 125273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 33567193 - 33567125
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | |||||| |||||| ||||||||    
T  33567193 tgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcatatatcactactcttt 33567125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 4834983 - 4834924
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||||| |||||| ||| |||||| |||||| ||||||||||||||||||||||    
T  4834983 tgaaaagagagagaaaagaagttatcacaagagttgtctcaaatagatgttcaaatatca 4834924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 10232616 - 10232682
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||||||| ||||||| |||||||||| | |||||| ||||||||||||| |||||    
T  10232616 tgaaaagagagaaaaaagaagttgtcaccaaaagttgtataaaatagttgttcaaatatcactactc 10232682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 19127249 - 19127310
Alignment:
Q  11 gagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    ||||||||||| |||||| |||||||||||| |||| | ||||||||||||| |||||||||    
T  19127249 gagaaaaaagaagttgtcgcaaaagttgtttaaaatggttgttcaaatatcactactctttt 19127310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 24431572 - 24431507
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||||||| || |||||||||| |||||| |||||| | ||||||||||||| |||||    
T  24431572 tgaaaagagagaaaaatgaagttgtcacaatagttgtctcaaatggttgttcaaatatcactactc 24431507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 5130332 - 5130264
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||||| |||||||| |||| |||| | |||||| ||||||||||||| |||||||    
T  5130332 tgaaaagagagaaaaaagaagttgtcacaaaaaattgtatgaaatagttgttcaaatatcactactctt 5130264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 12661901 - 12661841
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatca 62  Q
    ||||||||||||||||||| ||||||| |||||||||| | |||||| |||||||||||||    
T  12661901 tgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatagttgttcaaatatca 12661841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 33243695 - 33243624
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttttat 74  Q
    ||||||||||||||||| |  |||||||||||||| | | |||| | ||||||||||||| |||||||||||    
T  33243695 tgaaaagagagaaaaaataaattgtcacaaaagttatctgaaatggttgttcaaatatcattactcttttat 33243624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 9403641 - 9403699
Alignment:
Q  14 aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||| ||||||||||||||||| |||||| | |||| |||||||| |||||||||    
T  9403641 aaaaaagaagttgtcacaaaagttgtatcaaatggttgtttaaatatcactactctttt 9403699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 19376086 - 19376020
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    ||||||||||||||||||| ||||||||| ||||||| |||  ||| |||||||||| || ||||||    
T  19376086 tgaaaagagagaaaaaagaagttgtcacataagttgtctcatttagttgttcaaataacactactct 19376020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 43482486 - 43482540
Alignment:
Q  7 aagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatc 61  Q
    |||| |||||||||| |||||||||||| |||| |||||||| ||||||||||||    
T  43482486 aagaaagaaaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatc 43482540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 11767944 - 11767877
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||| ||||||||||| |||||  |||||||||| | |||| | ||||||||||||| |||||||    
T  11767944 tgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactctt 11767877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 12718334 - 12718263
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttttat 74  Q
    |||||||| ||| |||||| |||||||||||| |||||  |||| | ||||||||||||| ||||| |||||    
T  12718334 tgaaaagaaagagaaaagaagttgtcacaaaaattgttgaaaatggttgttcaaatatcactactcatttat 12718263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 31284348 - 31284289
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||||| |||||| |||||| |||||||||| | |||| | |||||||||||||    
T  31284348 tgaaaagagagagaaaagaagttgtcgcaaaagttgtatgaaatggttgttcaaatatca 31284289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 34381129 - 34381188
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||||||||| || |||||||||||| || | |||||| | |||||||||||||    
T  34381129 tgaaaagagagaaaaacgaagttgtcacaaaaattatatcaaatggttgttcaaatatca 34381188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 40566171 - 40566104
Alignment:
Q  3 tgaaaagagagaaaa-aagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    ||||||||||||||| || | ||||| | ||||||||| |||||| ||||||||||||||| ||||||    
T  40566171 tgaaaagagagaaaataaaaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 40566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 27392656 - 27392590
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||||||| |||||| | ||||||||||||||||| ||| || | |||||||||| || ||||||    
T  27392656 tgaaaagagaaaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactct 27392590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 91332 - 91400
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    ||||||||||||||| | ||||||||| | | ||||| |||||| | ||||||||||||| | ||||||    
T  91332 tgaaaagagagaaaagaaaggttgtcaaataggttgtatcaaatggttgttcaaatatcattgctcttt 91400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 12349926 - 12349966
Alignment:
Q  27 tcacaaaagttgtttcaaatagatgttcaaatatcaatact 67  Q
    ||||||||||||| |||||||| ||||||||||||| ||||    
T  12349926 tcacaaaagttgtatcaaatagttgttcaaatatcactact 12349966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 23991348 - 23991408
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 62  Q
    |||||||||||||||| |||||| ||| ||||||||||  ||||| | |||||||||||||    
T  23991348 tgaaaagagagaaaaatgaggttctcaaaaaagttgttagcaaatggttgttcaaatatca 23991408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 43214085 - 43214133
Alignment:
Q  24 ttgtcacaaaagttgtttcaaa-tagatgttcaaatatcaatactcttt 71  Q
    ||||||||||||||||| |||| ||||||||||||||||| | ||||||    
T  43214085 ttgtcacaaaagttgttgcaaaatagatgttcaaatatcatttctcttt 43214133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 8e-23; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 47849787 - 47849853
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||    
T  47849787 tgaaaagagagaaaaaagaggctgtcacaagagttgtttcaaatagatgttcaaatatcactactct 47849853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 29706020 - 29706085
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| |||||    
T  29706020 tgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactc 29706085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 52727402 - 52727333
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  52727402 tgaaaatagagaaaaaagagattgtcacaaaaattgtttcaaatagatgtttaaatatcactactctttt 52727333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 34733247 - 34733183
Alignment:
Q  4 gaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  34733247 gaaaaaagagaaaaaagagattgtctcaaaagttgtttcaaatagatgttcaaatatcactactc 34733183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 11173567 - 11173637
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttta 73  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||| | ||||||||||    
T  11173567 tgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatattattactctttta 11173637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 20380843 - 20380776
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||| | ||||||||||||| |||||||    
T  20380843 tgaaaagtgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactctt 20380776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 46473245 - 46473312
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||| | ||||||||||||| |||||||    
T  46473245 tgaaaagagagaaaaaagaagttgtcataaaagttgtatcaaatggttgttcaaatatcattactctt 46473312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 32687914 - 32687846
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||||| ||| |||| ||||||||| |||||||| ||||||||||||| |||||||    
T  32687914 tgaaaagagagaaaaaagaagttatcaccaaaagttgtatcaaatagttgttcaaatatcattactctt 32687846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 19418114 - 19418055
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||||| |||||| |||||||||| |||||| |||||| |||||||||||||||    
T  19418114 tgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatca 19418055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 49130971 - 49131030
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||||| |||||| |||||||||||| |||| |||||| |||||||||||||||    
T  49130971 tgaaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatatca 49131030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 7231960 - 7231894
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    ||||||||||||||||| |  |||||||||||||||| |||||| | ||||||||||||| ||||||    
T  7231960 tgaaaagagagaaaaaataaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactct 7231894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 34271442 - 34271373
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatag--atgttcaaatatcaatactctt 70  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||  || ||||||||||| |||||||    
T  34271442 tgaaaagagagaaaaaagagattgtatcaaaagttgtttcaaatagatatcttcaaatatcactactctt 34271373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 41112026 - 41111960
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||||||||| |||||| ||||| | ||||||||| |||||| ||||||||||||||| ||||||    
T  41112026 tgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 41111960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 53715436 - 53715492
Alignment:
Q  7 aagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 62  Q
    |||||||||||| |||||||||| |||||||||| |||||||| |||||||||||||    
T  53715436 aagagagaaaaaggaggttgtcataaaagttgttatcaaatagttgttcaaatatca 53715492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 31997921 - 31997988
Alignment:
Q  5 aaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||||||| |||||| ||||||| |||||||||| |||||| | ||||||||||||| ||||||||    
T  31997921 aaaagagagagaaaagaagttgtcatcaaaagttgtctcaaatggttgttcaaatatcactactcttt 31997988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 37303500 - 37303567
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||| |  |||||||||||||||| ||| |||| |||||||||| || |||||||    
T  37303500 tgaaaagagagaaaaaataaattgtcacaaaagttgtctcatatagttgttcaaataacactactctt 37303567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 46315909 - 46315844
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||| ||| |||| | |||||||||| |||||| || ||| |||||||||||||||||||||    
T  46315909 tgaaaagaaagataaaaaaagttgtcacaagagttgtctcgaatggatgttcaaatatcaatactc 46315844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 5188353 - 5188389
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgt 39  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5188353 tgaaaagagagaaaaaagaagttgtcacaaaagttgt 5188389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 6126571 - 6126643
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactcttttat 74  Q
    ||||||||||||||||||| ||||| | |||||||||| | |||| | ||||||||||||| |||||| ||||    
T  6126571 tgaaaagagagaaaaaagaagttgtaaccaaaagttgtatgaaatggttgttcaaatatcactactctattat 6126643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 32457709 - 32457642
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtc--acaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||||||| ||||||  | |||| |||| |||||||| ||||||||||||| |||||    
T  32457709 tgaaaagagagaaaaaagaagttgtcaaaaaaaaattgtatcaaatagttgttcaaatatcactactc 32457642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 37215185 - 37215129
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 59  Q
    ||||||||||||||||| | ||||||||||||||||| ||| || | ||||||||||    
T  37215185 tgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 37215129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 44127142 - 44127086
Alignment:
Q  7 aagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 62  Q
    |||||||||||| |||||||||| ||||||||||  ||||||| |||||||||||||    
T  44127142 aagagagaaaaatgaggttgtcataaaagttgttagcaaatagttgttcaaatatca 44127086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 55344250 - 55344179
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaa-gttgtttcaaatagatgttcaaatatcaatactctttta 73  Q
    ||||||||||||||| | | ||||||| |||| ||||| | |||||| ||||||||||||| ||||||||||    
T  55344250 tgaaaagagagaaaagaaaagttgtcataaaatgttgtatgaaatagttgttcaaatatcactactctttta 55344179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 46953086 - 46953132
Alignment:
Q  23 gttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    ||||||| ||||||||| |||||||| ||||||||||||| ||||||    
T  46953086 gttgtcataaaagttgtatcaaatagttgttcaaatatcactactct 46953132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 27198108 - 27198071
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtt 40  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  27198108 tgaaaagagagaaaaatgaggttgtcataaaagttgtt 27198071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 28300600 - 28300535
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||| | | |||||||||| |||||| ||| || | ||||||||||||| |||||    
T  28300600 tgaaaagagagaaaataaaagttgtcacaagagttgtatcatatggttgttcaaatatcactactc 28300535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 37303028 - 37302963
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||||||||||  |||||||||||||||| ||| ||   |||||||||| || |||||    
T  37303028 tgaaaagagagaaaaaagaaattgtcacaaaagttgtctcatatgcttgttcaaataacactactc 37302963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 41957630 - 41957695
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||| |||||||||||  || ||||||||||||||| |||| | |||| |||||||| |||||    
T  41957630 tgaaaagtgagaaaaaagaaattatcacaaaagttgtttaaaatggttgtttaaatatcactactc 41957695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 51973393 - 51973442
Alignment:
Q  23 gttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||||||||||  ||||| ||||||||||||||| | |||||||    
T  51973393 gttgtcacaaaagttgtaccaaatggatgttcaaatatcatttctctttt 51973442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 35272146 - 35272210
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat-agatgttcaaatatcaatactc 68  Q
    ||||||||||||||||| ||||||||| ||||||| | |||| |  ||||||||||||| |||||    
T  35272146 aaaagagagaaaaaagaagttgtcacataagttgtctaaaatgaattgttcaaatatcactactc 35272210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 51650478 - 51650542
Alignment:
Q  8 agagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||||||||||| ||||||| |||||||||| | |||| | |||||||||||||  |||||||    
T  51650478 agagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcaccactcttt 51650542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 3e-22; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 29795553 - 29795618
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  29795553 tgaaaagagagaaaaaagtggttgtcacaaaagttgtttcaaattgatgttcaaatatcactactc 29795618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 36435798 - 36435857
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  36435798 tgaaaagagagagaaaagaggttgtcacaaaagttgtttcaaataaatgttcaaatatca 36435857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 39454201 - 39454135
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  39454201 tgaaaagagagaaaaaagagattgtctcaaaacttgtttcaaatagatgttcaaatatcactactct 39454135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 6365305 - 6365362
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  6365305 aaaagagagaaaaaagaggttgtcataaaagttgttttaaatagatgttcaaatatca 6365362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 3091858 - 3091926
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||  ||||||||||||| ||||||||    
T  3091858 tgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaataattgttcaaatatcactactcttt 3091926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 36133091 - 36133159
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||||| ||||||||    
T  36133091 tgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactactcttt 36133159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 11164330 - 11164271
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  11164330 tgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatca 11164271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 34442232 - 34442295
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  34442232 aaaagagagagaaaagaggttgtcagaaaaattgtttcaaatagatgttcaaatatcactactc 34442295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 13711178 - 13711246
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    ||||||||||||||||||| |||||||||||||||||   |||||| ||||||||||||| ||||||||    
T  13711178 tgaaaagagagaaaaaagaagttgtcacaaaagttgtacaaaatagttgttcaaatatcactactcttt 13711246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 12600165 - 12600224
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||| |||||||||||||    
T  12600165 tgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatca 12600224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 14714103 - 14714168
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||| |||||| |||||||||||| |||| |||||| ||||||||||||||| |||||    
T  14714103 tgaaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatatcactactc 14714168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 22390269 - 22390337
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||||||||| |||||| |||||||||| |||||| |||||| ||||||||||||||  ||||||||    
T  22390269 tgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatctctactcttt 22390337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 25801765 - 25801706
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    ||||||||||||||||||| ||  ||||||||||||| |||||| | |||||||||||||    
T  25801765 tgaaaagagagaaaaaagaagtgatcacaaaagttgtctcaaattgttgttcaaatatca 25801706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 42251874 - 42251807
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||   |||| |||||||| |||||||    
T  42251874 tgaaaagagagaaaaaagaagttgtcacataagttgttccaaatgattgtttaaatatcactactctt 42251807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 2013239 - 2013173
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||||||||| |||| | |||||||||| |||||| |||||| |||||| |||||||| ||||||    
T  2013239 tgaaaagagagagaaaataagttgtcacaagagttgtctcaaatggatgttaaaatatcactactct 2013173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 44189949 - 44190011
Alignment:
Q  10 agagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    ||||| |||||| |||||||||| |||||| || ||| ||||||||||||||| |||||||||    
T  44189949 agagagaaaagatgttgtcacaagagttgtctcgaatggatgttcaaatatcactactctttt 44190011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 8555246 - 8555177
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||||||||||||| |||||||||| ||||||||||  ||||||  ||||||||||||| | ||||||    
T  8555246 tgaaaagagagaaaaaggaggttgtcataaaagttgttggcaaataattgttcaaatatcattgctcttt 8555177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 14140293 - 14140228
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||||||||||  |||||||||||||| ||| ||||   ||||||||||||| |||||    
T  14140293 tgaaaagagagaaaaaagaaattgtcacaaaagttattttaaatgattgttcaaatatcactactc 14140228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 23344943 - 23344878
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||| |||||| ||||||| || |||||| ||||||  |||||||||||||| |||||    
T  23344943 tgaaaagagagagaaaagaagttgtcagaagagttgtctcaaatgaatgttcaaatatcactactc 23344878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 43650499 - 43650430
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttttat 74  Q
    |||||||||||||||||  |||||||| ||||||| ||||||   |||| |||||||| |||||||||||    
T  43650499 aaaagagagaaaaaagaaattgtcacataagttgtatcaaatgattgtttaaatatcattactcttttat 43650430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 2464274 - 2464322
Alignment:
Q  23 gttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    ||||||||||||||||| |||||| ||||||||||||||| | ||||||    
T  2464274 gttgtcacaaaagttgtatcaaatggatgttcaaatatcatttctcttt 2464322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 32750115 - 32750183
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    ||||||||||||||||| | |||||||||||| |||| ||| || | |||||||||| || ||||||||    
T  32750115 tgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactactcttt 32750183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 36376805 - 36376737
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    ||||||||||||||||||| ||||| | |||| || | |||| ||||||||||||||||| | ||||||    
T  36376805 tgaaaagagagaaaaaagaagttgttaaaaaaattatctcaattagatgttcaaatatcactcctcttt 36376737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 37631317 - 37631261
Alignment:
Q  7 aagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 62  Q
    ||||||||||||||||||||||| ||||||||||  ||||| | |||||||||||||    
T  37631317 aagagagaaaaaagaggttgtcataaaagttgttagcaaatggttgttcaaatatca 37631261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 39285972 - 39286020
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgtt 53  Q
    |||| |||||||||||| ||||||||||||||||| |||||||| ||||    
T  39285972 aaaaaagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgtt 39286020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 13104596 - 13104663
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||| | |||||||||||| |||| ||| || | |||||||||| || |||||||    
T  13104596 tgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactactctt 13104663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 42081154 - 42081220
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||| |||||||||||| ||||| | |||| |||| ||||||  |||||||||||||| ||||||    
T  42081154 tgaaaatagagaaaaaagaagttgttaaaaaaattgtctcaaattaatgttcaaatatcactactct 42081220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 11229275 - 11229210
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||| ||||||||||| |||||  |||||||||| | |||| | ||||||||||||| |||||    
T  11229275 tgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactc 11229210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 23045278 - 23045347
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||| |||||||||||| ||||||||| ||||||| |||  | | |||||||||| || |||||||||    
T  23045278 tgaaaatagagaaaaaagaagttgtcacataagttgtctcatttggttgttcaaataacactactctttt 23045347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 31296797 - 31296728
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    |||||||||||||||||||  |||||||| |||||||  || || | | ||||||||||| |||||||||    
T  31296797 tgaaaagagagaaaaaagaaattgtcacataagttgtcccatatggttattcaaatatcactactctttt 31296728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 12962505 - 12962569
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||||||| ||||||  |||| |||||| || | |||||||| ||||||||||||| ||||||    
T  12962505 aaaagagagagaaaagaaattgttacaaaatttatatcaaatagttgttcaaatatcactactct 12962569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 113742 - 113808
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  113742 tgaaaagagagaaaagagaggttgtcacaaaaattgtttcaaatagatgtttaaatatcactactct 113808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 40610346 - 40610411
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||||| |||||    
T  40610346 tgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactactc 40610411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 49453597 - 49453662
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    ||||||||||||||||||   |||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  49453597 tgaaaagagagaaaaaag---ttgtcacaaaagttgtatcaaatagttgttcaaatatcactactcttt 49453662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 22389479 - 22389411
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    ||||||||||||||||||| ||||||||||||||||  |||||| | ||||||||||||| |||||||||    
T  22389479 tgaaaagagagaaaaaagaagttgtcacaaaagttg-atcaaatggttgttcaaatatcattactctttt 22389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 36418196 - 36418251
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaat 58  Q
    |||||||||||| |||||| ||||||||||||||||| |||||||| |||||||||    
T  36418196 tgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaat 36418251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 46948096 - 46948162
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    |||||||| ||| |||||| |||||||||| |||||| |||||| ||||||||||||||| ||||||    
T  46948096 tgaaaagatagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatcactactct 46948162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 2362486 - 2362551
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||| ||||| |||||| |||||||||||| |||| |||||||| ||||||||||||| |||||    
T  2362486 tgaaaaaagagagaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatcactactc 2362551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 50659146 - 50659079
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    |||||||||||| |||||| ||||||||| ||||||||||| || | |||||||||| || |||||||    
T  50659146 tgaaaagagagagaaaagaagttgtcacataagttgtttcatatggttgttcaaataacactactctt 50659079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 5477115 - 5477073
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 47  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  5477115 aaaagagagaaaaaagaagttgtcacaaaagttgtatcaaata 5477073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 15466866 - 15466932
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||| ||||||||||| ||||||||||| || ||| |||||||| |||||||||||  |||||||    
T  15466866 aaaagaaagaaaaaagagattgtcacaaaaattattttaaatagatattcaaatatcaccactcttt 15466932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 32966386 - 32966444
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 62  Q
    |||||||||||||| |||||||||||||||||||||   |||||| |||||||||||||    
T  32966386 aaaagagagaaaaatgaggttgtcacaaaagttgttagtaaatagttgttcaaatatca 32966444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 39010931 - 39010997
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    ||||||||||||||||| | ||||||||||||||||| ||| || | |||||||||| || ||||||    
T  39010931 tgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactct 39010997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 14002696 - 14002627
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgttt-caaatagatgttcaaatatcaatactcttt 71  Q
    |||||||||||||||| ||  |||||| ||||||||||  ||||||| ||||||||||||| ||||||||    
T  14002696 tgaaaagagagaaaaatgaaattgtcataaaagttgttagcaaatagttgttcaaatatcactactcttt 14002627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 43755629 - 43755572
Alignment:
Q  14 aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 71  Q
    |||||| | |||||||||| |||||| |||||| ||||||||||||||| ||||||||    
T  43755629 aaaaaaaaagttgtcacaagagttgtctcaaatggatgttcaaatatcattactcttt 43755572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 37690532 - 37690576
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 47  Q
    |||||||||||| |||||| ||||||||||||||||| |||||||    
T  37690532 tgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaata 37690576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 51571550 - 51571602
Alignment:
Q  10 agagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||||| ||||||||||||||||| | |||| | |||||||||||||    
T  51571550 agagaaaaaagaagttgtcacaaaagttgtattaaatggttgttcaaatatca 51571602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 31290162 - 31290103
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||| |||||||||| | ||||||||||||||||| | |||| | |||||||||||||    
T  31290162 tgaaaaaagagaaaaaataagttgtcacaaaagttgtgtgaaatggttgttcaaatatca 31290103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 30631799 - 30631733
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 69  Q
    ||||||| ||||||||||| |||||  |||||||||| | |||| | ||||||||||||| ||||||    
T  30631799 tgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactct 30631733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 31480089 - 31480023
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    ||||||||||||||||| | ||||||| ||||| |||| | |||||| ||||||||||||| |||||    
T  31480089 tgaaaagagagaaaaaaaaagttgtcaccaaaaattgtatgaaatagttgttcaaatatcactactc 31480023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 33676029 - 33676083
Alignment:
Q  14 aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 68  Q
    |||||| | ||||||||||||||| | | |||||| |||||||||||||||||||    
T  33676029 aaaaaaaaagttgtcacaaaagttttattaaatagttgttcaaatatcaatactc 33676083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 29300553 - 29300496
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||| ||||||  |||||||| |||||||| || |||| |||||||||||||    
T  29300553 aaaagagagagaaaagaaattgtcacataagttgttccacatagttgttcaaatatca 29300496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 50061928 - 50061871
Alignment:
Q  5 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 62  Q
    |||||||||| |||||| ||||| | || | |||||||||||| ||||||||||||||    
T  50061928 aaaagagagagaaaagaagttgttataagaattgtttcaaataaatgttcaaatatca 50061871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 21255735 - 21255679
Alignment:
Q  7 aagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 62  Q
    |||||||||||| |||||||||| ||||||||||  ||||| | |||||||||||||    
T  21255735 aagagagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaatatca 21255679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 28253132 - 28253188
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 59  Q
    |||||||||||| |||||| ||||| ||||||||||| ||| || | ||||||||||    
T  28253132 tgaaaagagagagaaaagaagttgttacaaaagttgtctcatatggttgttcaaata 28253188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 31427900 - 31427844
Alignment:
Q  14 aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||  |||||| ||||||||||| |||||  ||||||||||||| |||||||    
T  31427900 aaaaaagaaattgtcataaaagttgtttaaaataattgttcaaatatcactactctt 31427844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 43640941 - 43640881
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 62  Q
    |||||||||||||||| ||||||||||  |||||||||  ||||| | |||||||||||||    
T  43640941 tgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatca 43640881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 48872905 - 48872834
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactcttttat 74  Q
    |||||||||||| |||| || ||||||| ||||||||| | |||| | ||||||||||||| |||||||||||    
T  48872905 tgaaaagagagagaaaaaag-ttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactcttttat 48872834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 50141889 - 50141833
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 59  Q
    |||||||||||| |||| |  |||||||||||||||| ||| |||| ||||||||||    
T  50141889 tgaaaagagagagaaaataaattgtcacaaaagttgtctcatatagttgttcaaata 50141833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 11309 - 11353
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11309 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 11353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 18121 - 18187
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||||||||||||| || |||||| ||||||||| |||||||| ||||||||||||| |||||||    
T  18121 tgaaaagagagaaaaaaaag-ttgtcataaaagttgtatcaaatagttgttcaaatatcactactctt 18187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 15131 - 15076
Alignment:
Q  15 aaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 70  Q
    ||||||| |||||||||||||||||  ||||||| ||||||||||||| |||||||    
T  15131 aaaaagaagttgtcacaaaagttgtaccaaatagttgttcaaatatcactactctt 15076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 6544 - 6602
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatc 61  Q
    ||||||||||||||||||| ||| |||| | |||||| |||||| ||||||||||||||    
T  6544 tgaaaagagagaaaaaagaagttatcacgagagttgtctcaaatggatgttcaaatatc 6602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 11490 - 11421
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 72  Q
    ||||||| ||||||||| |  ||||  |||||||||| | |||||| ||||||||||||| |||||||||    
T  11490 tgaaaagtgagaaaaaataaattgtatcaaaagttgtctaaaatagttgttcaaatatcactactctttt 11421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 10470 - 10414
Alignment:
Q  3 tgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 59  Q
    |||||||||||| |||| | ||||||||||||||||| ||| || | ||||||||||    
T  10470 tgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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