View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14337_low_10 (Length: 401)
Name: NF14337_low_10
Description: NF14337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14337_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 19 - 393
Target Start/End: Original strand, 34078050 - 34078424
Alignment:
| Q |
19 |
tgaaagtcatcaactcttttttctacttccctcattttcttctcacaaccatgaggatcaatccacctccacattggtaggtagtcacctaaatatatca |
118 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
34078050 |
tgaaagtcatcaactcttttttctacttccctcattttcttctcacaaccatgaggatcaatccacctccacattggtaagtagtcacctaaatatatca |
34078149 |
T |
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| Q |
119 |
caccaagtaaccaaaataattcatgagttatgtgcataaactccatagcttcttgtggccctgcagatttagaaccaaaatattgttttcctaacaacat |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34078150 |
caccaagtaaccaaaataattcatgagttatgtgcataaactccatagcttcttgtggccctgcagatttagaaccaaaatattgttttcctaacaacat |
34078249 |
T |
|
| Q |
219 |
tctagtgacattgttcattgaaaaagcacccaaaatttctcttaaattaatgggattttcgaaattggcccgtgcaaaaacatctttaacaagatgttgt |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |
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| T |
34078250 |
tctagtgacattgttcattgaaaaagcacccaaaatttctcttaaattaatgggattttcggatttggcccgtgcaaaaacatctttaacaagatgttgt |
34078349 |
T |
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| Q |
319 |
gcttcttcttgacgatgttttgagaaggattcaagtctctttgtagttagtaagtgttccatgcaaattcttctc |
393 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34078350 |
gcttcttcttgacgatgttttgagaaggattcaagtctctttgtagttagtaagtgttccatgcaaattcttctc |
34078424 |
T |
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