View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14338_high_6 (Length: 328)
Name: NF14338_high_6
Description: NF14338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14338_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 42 - 303
Target Start/End: Original strand, 44646755 - 44647016
Alignment:
| Q |
42 |
tgataaagttaaagtaaattgaagttgtgaatgtaactaatttaagggttccaagtcaagtatcaattgcacacacatatcaaatgagtacgtttttcac |
141 |
Q |
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| T |
44646755 |
tgataaagttaaagtaaattgaagttgtgaatgtaactaatttaagggttccaagtcaagtatcatttgcacacacatatcaaatgagtacgtttttcac |
44646854 |
T |
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| Q |
142 |
aaaccgattttcacctccacagcataatagagtgaagaagaaaaatggcttattattatagaaacctaataaagataatgtctaacatgcttacatctat |
241 |
Q |
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| T |
44646855 |
aaaccgattttcacctccacagcataatagagtgaagaagaaaaatggcttattattatggaaacctaataaagataatgtctaacatgcttacatctat |
44646954 |
T |
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| Q |
242 |
aatgaagtcataaatccttctttgtcgtcttgctacttttaccatatctatatgtgaggaat |
303 |
Q |
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| T |
44646955 |
aatgaagtcataaatccttctttgtcgtcttgctacttttaccatatctatatgtgaggaat |
44647016 |
T |
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