View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14338_high_7 (Length: 283)
Name: NF14338_high_7
Description: NF14338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14338_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 44447832 - 44448084
Alignment:
| Q |
1 |
agaagaagctcatggaaagaagaaacaccatttctttggctgaacatatgtgtataatataattatataataagcacacaagcatattatggagatattc |
100 |
Q |
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| T |
44447832 |
agaagaagctcatggaaagaagaaacaccatttctttggctgaacatatgtgtataatataattatataataagcacacaagcatattatggagatattc |
44447931 |
T |
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| Q |
101 |
attctgcttagctttgtcttataattaattatgcttttggcttatttatgtgtattagtattaagttaatcttcctgtttgctttgagtgagtggtttgg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
44447932 |
attctgcttagctttgtcttataattaattatgcttttggcttatttatgtgtattagtattaagttaatcttccagtttgctttgagtgagtggtttgg |
44448031 |
T |
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| Q |
201 |
agaatgtttccagcttggtgtcatatagatgtatgtatgaatctatgttgtgtcaactgat |
261 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
44448032 |
agaatgtttccagcttggtgtca--------tatgtatgaatctatgttgtgtcaactgat |
44448084 |
T |
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