View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1433_high_55 (Length: 250)
Name: NF1433_high_55
Description: NF1433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1433_high_55 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 26019076 - 26018856
Alignment:
| Q |
1 |
cctctgttgataccacacaaactcaatctcttatgtttagtgtaaaatggaaaattatttgtcttttagtgacacaattatgttctgcattctatggagc |
100 |
Q |
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| T |
26019076 |
cctctgttgataccacacaaactcaatctcttatgtttagtgtaaaatggaaaattatttgtcttttagtg-cacaattatgttctgcgttctatggagc |
26018978 |
T |
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| Q |
101 |
tannnnnnnagcttagtacatacataggtcatagggatgtgtaggttagttacttagtttaatttggtagagttgatcaagatcggtcccataaccaaac |
200 |
Q |
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| T |
26018977 |
aatttttttagcttagtacatacataggtcatagggatgtgtaggttagttacttagtttaatttggtagagttgatcaagatcggtcccataaccaaac |
26018878 |
T |
|
| Q |
201 |
ttgcataaatcgagttataagt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
26018877 |
ttgcataaatcgagttataagt |
26018856 |
T |
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