View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1433_high_63 (Length: 243)
Name: NF1433_high_63
Description: NF1433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1433_high_63 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 43115780 - 43115555
Alignment:
| Q |
1 |
caaacacaagattaaaaggttattttttggattttaaggtcgatgttgtgcatgacaacaatgagttagcgatgagtttggtacctgattttgaattaga |
100 |
Q |
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| T |
43115780 |
caaacacaagattaaaaggttattttttggattttaaggtcgatgttgtgcatgacaacaatgagttagcgatgagtttggtacctgattttgaattaga |
43115681 |
T |
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| Q |
101 |
aaaacatgaacagaaacaaatggatgtgaaggcatcatcaaataacgttgtgtcgtttcaaaagtgggatttggataaaatgagtaatgaaagacaaagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43115680 |
aaaacatgaacagaaacaaatggatgtgaaggcatcatcaaataacgttgtgtcgtttcaaaagtgggatttggataaaatgagtaatgaaagacaaagt |
43115581 |
T |
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| Q |
201 |
agttctaattctattatgtttggtgt |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
43115580 |
agttctaattctattatgtttggtgt |
43115555 |
T |
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