View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1433_high_69 (Length: 239)

Name: NF1433_high_69
Description: NF1433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1433_high_69
NF1433_high_69
[»] chr5 (39 HSPs)
chr5 (2-220)||(10293172-10293390)
chr5 (9-208)||(25556967-25557167)
chr5 (9-219)||(18695004-18695215)
chr5 (9-192)||(16901089-16901272)
chr5 (9-209)||(245606-245806)
chr5 (2-219)||(40428724-40428941)
chr5 (8-160)||(16307567-16307720)
chr5 (9-220)||(36641142-36641355)
chr5 (17-221)||(26639137-26639343)
chr5 (40-160)||(31055437-31055557)
chr5 (40-220)||(38408628-38408809)
chr5 (19-206)||(10379296-10379483)
chr5 (83-221)||(8645795-8645935)
chr5 (5-160)||(19169404-19169559)
chr5 (49-220)||(23765522-23765694)
chr5 (49-220)||(23815370-23815542)
chr5 (49-217)||(15885297-15885465)
chr5 (2-150)||(38476555-38476703)
chr5 (17-139)||(7835792-7835913)
chr5 (19-136)||(17825599-17825716)
chr5 (2-145)||(2373221-2373364)
chr5 (2-136)||(41663608-41663743)
chr5 (38-136)||(23040069-23040170)
chr5 (98-219)||(35302096-35302217)
chr5 (40-224)||(37961371-37961557)
chr5 (45-220)||(34125058-34125236)
chr5 (4-136)||(462851-462983)
chr5 (21-160)||(7187252-7187388)
chr5 (38-209)||(17704708-17704876)
chr5 (68-208)||(32465986-32466125)
chr5 (102-221)||(31648054-31648174)
chr5 (155-222)||(26639034-26639101)
chr5 (155-221)||(16900995-16901061)
chr5 (171-220)||(20654050-20654099)
chr5 (88-136)||(20653905-20653952)
chr5 (109-221)||(24025019-24025131)
chr5 (155-220)||(18695242-18695307)
chr5 (171-223)||(7835716-7835768)
chr5 (13-65)||(38322357-38322409)
[»] chr6 (37 HSPs)
chr6 (17-221)||(32451724-32451930)
chr6 (16-220)||(4597504-4597710)
chr6 (17-220)||(24051008-24051212)
chr6 (17-220)||(18791357-18791561)
chr6 (16-219)||(26710406-26710611)
chr6 (9-219)||(24603361-24603573)
chr6 (40-208)||(3118692-3118860)
chr6 (9-209)||(25819695-25819896)
chr6 (45-220)||(22968283-22968458)
chr6 (45-220)||(23819935-23820110)
chr6 (38-220)||(8412757-8412941)
chr6 (9-205)||(15298500-15298696)
chr6 (9-160)||(34833986-34834137)
chr6 (17-219)||(22269410-22269610)
chr6 (9-220)||(31210793-31211006)
chr6 (9-220)||(14572270-14572481)
chr6 (9-142)||(35102583-35102716)
chr6 (86-219)||(18749297-18749432)
chr6 (2-160)||(19282298-19282454)
chr6 (9-220)||(26239956-26240169)
chr6 (42-218)||(4013791-4013968)
chr6 (88-221)||(2058993-2059126)
chr6 (2-220)||(24615778-24615994)
chr6 (58-221)||(32682419-32682582)
chr6 (2-141)||(16415417-16415555)
chr6 (54-160)||(4370959-4371065)
chr6 (14-85)||(23124817-23124888)
chr6 (2-196)||(34528175-34528367)
chr6 (9-160)||(12427292-12427445)
chr6 (9-85)||(20863820-20863896)
chr6 (2-107)||(2636890-2636997)
chr6 (49-142)||(9241732-9241824)
chr6 (9-65)||(2058926-2058982)
chr6 (47-117)||(12291547-12291618)
chr6 (155-216)||(15298724-15298785)
chr6 (155-220)||(35102490-35102555)
chr6 (102-138)||(12293658-12293694)
[»] chr1 (36 HSPs)
chr1 (9-220)||(24961952-24962165)
chr1 (9-221)||(3616797-3617011)
chr1 (9-221)||(19078017-19078229)
chr1 (9-221)||(19125907-19126119)
chr1 (2-220)||(24196260-24196480)
chr1 (40-219)||(46432339-46432520)
chr1 (9-220)||(4059614-4059827)
chr1 (9-209)||(48471955-48472155)
chr1 (9-209)||(24749807-24750010)
chr1 (9-220)||(28920748-28920956)
chr1 (40-219)||(43706777-43706957)
chr1 (17-220)||(29676078-29676283)
chr1 (40-196)||(51719245-51719401)
chr1 (32-220)||(2657627-2657816)
chr1 (2-158)||(16551728-16551885)
chr1 (40-219)||(2425225-2425405)
chr1 (9-136)||(47685186-47685313)
chr1 (9-135)||(27092944-27093070)
chr1 (45-220)||(18606811-18606988)
chr1 (9-160)||(29182092-29182243)
chr1 (2-150)||(4455127-4455276)
chr1 (22-220)||(9387694-9387893)
chr1 (88-160)||(21148039-21148111)
chr1 (57-219)||(22786031-22786194)
chr1 (28-158)||(31084723-31084852)
chr1 (2-218)||(2260463-2260677)
chr1 (50-160)||(10684854-10684965)
chr1 (48-136)||(26605408-26605494)
chr1 (38-136)||(16971935-16972034)
chr1 (39-160)||(21185268-21185386)
chr1 (155-221)||(4059520-4059586)
chr1 (171-217)||(28552307-28552353)
chr1 (16-65)||(16858487-16858536)
chr1 (155-220)||(16972090-16972155)
chr1 (155-220)||(46432215-46432280)
chr1 (155-211)||(16551652-16551708)
[»] chr3 (53 HSPs)
chr3 (9-221)||(48907384-48907597)
chr3 (9-220)||(26628117-26628330)
chr3 (9-221)||(8542608-8542822)
chr3 (9-219)||(3328905-3329117)
chr3 (9-206)||(30155237-30155434)
chr3 (40-219)||(48860704-48860883)
chr3 (9-219)||(13080894-13081106)
chr3 (38-220)||(25179577-25179761)
chr3 (39-220)||(27852873-27853056)
chr3 (9-219)||(8339032-8339244)
chr3 (40-209)||(25022786-25022954)
chr3 (40-206)||(23428742-23428910)
chr3 (38-220)||(26633480-26633660)
chr3 (5-209)||(4521964-4522170)
chr3 (40-195)||(28173852-28174009)
chr3 (5-221)||(3780881-3781094)
chr3 (40-221)||(10743407-10743588)
chr3 (16-216)||(22447839-22448045)
chr3 (16-219)||(22500694-22500898)
chr3 (9-219)||(46673139-46673350)
chr3 (9-220)||(40836270-40836483)
chr3 (9-142)||(28154974-28155107)
chr3 (4-208)||(33279672-33279877)
chr3 (88-221)||(20001709-20001842)
chr3 (9-142)||(34878621-34878754)
chr3 (2-160)||(22416393-22416553)
chr3 (9-136)||(26126998-26127125)
chr3 (2-128)||(26177041-26177167)
chr3 (17-160)||(33105002-33105145)
chr3 (9-95)||(6927596-6927682)
chr3 (109-221)||(3820915-3821025)
chr3 (5-85)||(3821018-3821098)
chr3 (2-136)||(23320446-23320579)
chr3 (17-160)||(35201095-35201237)
chr3 (9-221)||(1743253-1743461)
chr3 (14-160)||(9496313-9496458)
chr3 (88-164)||(46387745-46387820)
chr3 (88-219)||(25336358-25336488)
chr3 (2-142)||(31039062-31039202)
chr3 (9-66)||(43668583-43668640)
chr3 (155-219)||(8338940-8339004)
chr3 (88-220)||(36311151-36311283)
chr3 (155-222)||(26633358-26633424)
chr3 (88-209)||(4775860-4775983)
chr3 (86-160)||(18388869-18388942)
chr3 (155-220)||(25179815-25179880)
chr3 (109-220)||(32960803-32960911)
chr3 (16-95)||(32960742-32960820)
chr3 (155-221)||(20001948-20002013)
chr3 (155-220)||(22447739-22447804)
chr3 (155-220)||(28173728-28173793)
chr3 (167-220)||(48907292-48907345)
chr3 (13-65)||(48743227-48743279)
[»] chr4 (42 HSPs)
chr4 (9-220)||(41877120-41877329)
chr4 (2-220)||(43793716-43793935)
chr4 (9-221)||(13397767-13397981)
chr4 (14-219)||(52838231-52838434)
chr4 (9-220)||(5304439-5304650)
chr4 (5-220)||(35475290-35475505)
chr4 (9-160)||(15058910-15059061)
chr4 (9-219)||(25011735-25011947)
chr4 (7-219)||(4357252-4357466)
chr4 (40-209)||(9195787-9195956)
chr4 (9-221)||(6789050-6789264)
chr4 (9-208)||(27018228-27018426)
chr4 (40-219)||(4433306-4433485)
chr4 (9-160)||(13826511-13826661)
chr4 (40-220)||(55780386-55780567)
chr4 (40-220)||(55844566-55844747)
chr4 (32-220)||(45633437-45633626)
chr4 (40-219)||(19232466-19232648)
chr4 (50-194)||(41034661-41034807)
chr4 (50-160)||(1588546-1588655)
chr4 (38-219)||(2931321-2931504)
chr4 (18-220)||(4098656-4098860)
chr4 (2-126)||(15795412-15795536)
chr4 (17-136)||(51291269-51291389)
chr4 (17-128)||(2715817-2715927)
chr4 (109-221)||(25618788-25618902)
chr4 (2-220)||(24626305-24626521)
chr4 (38-133)||(23362519-23362614)
chr4 (46-160)||(9397252-9397367)
chr4 (167-221)||(24626220-24626274)
chr4 (155-220)||(4433182-4433247)
chr4 (155-220)||(13826419-13826484)
chr4 (155-219)||(5304347-5304411)
chr4 (9-72)||(12101218-12101281)
chr4 (2-64)||(20919419-20919481)
chr4 (155-221)||(36729087-36729153)
chr4 (167-220)||(1521544-1521597)
chr4 (155-216)||(4357491-4357552)
chr4 (171-220)||(20919334-20919383)
chr4 (16-85)||(36729187-36729256)
chr4 (155-220)||(43793630-43793695)
chr4 (172-216)||(20079151-20079195)
[»] chr2 (28 HSPs)
chr2 (9-220)||(38716193-38716405)
chr2 (9-221)||(11175905-11176119)
chr2 (9-209)||(2986696-2986898)
chr2 (40-209)||(4587870-4588042)
chr2 (17-220)||(15735063-15735268)
chr2 (9-220)||(18537920-18538133)
chr2 (9-222)||(6763809-6764024)
chr2 (9-220)||(9051120-9051332)
chr2 (9-220)||(30714366-30714579)
chr2 (17-220)||(25298901-25299105)
chr2 (9-206)||(9787573-9787771)
chr2 (40-220)||(15700746-15700928)
chr2 (9-160)||(22191107-22191257)
chr2 (2-206)||(36464289-36464491)
chr2 (9-123)||(17368314-17368428)
chr2 (9-136)||(22387159-22387287)
chr2 (38-160)||(331773-331896)
chr2 (38-220)||(26829210-26829390)
chr2 (2-133)||(4104909-4105040)
chr2 (2-141)||(28365590-28365729)
chr2 (52-133)||(1020478-1020559)
chr2 (14-136)||(2190617-2190740)
chr2 (155-216)||(36464511-36464572)
chr2 (13-211)||(2123384-2123584)
chr2 (45-116)||(21494555-21494626)
chr2 (111-165)||(15147801-15147854)
chr2 (155-220)||(11176147-11176212)
chr2 (155-220)||(30714274-30714339)
[»] chr8 (30 HSPs)
chr8 (9-221)||(17648241-17648455)
chr8 (9-206)||(38630068-38630267)
chr8 (9-219)||(30784357-30784568)
chr8 (17-221)||(4518967-4519173)
chr8 (9-209)||(12723353-12723555)
chr8 (9-209)||(19924275-19924477)
chr8 (9-160)||(19391479-19391630)
chr8 (9-208)||(8802492-8802692)
chr8 (9-226)||(5192363-5192582)
chr8 (9-221)||(44146970-44147182)
chr8 (9-211)||(21666366-21666569)
chr8 (16-220)||(4807699-4807906)
chr8 (81-220)||(21929967-21930106)
chr8 (16-219)||(33895375-33895578)
chr8 (2-220)||(22452258-22452478)
chr8 (9-160)||(32400414-32400565)
chr8 (2-220)||(7117199-7117418)
chr8 (2-145)||(4423115-4423259)
chr8 (7-220)||(15869428-15869638)
chr8 (2-138)||(3208063-3208199)
chr8 (42-209)||(18881628-18881795)
chr8 (2-160)||(18252971-18253127)
chr8 (9-95)||(23565215-23565301)
chr8 (56-219)||(3380199-3380363)
chr8 (49-206)||(1824621-1824777)
chr8 (49-206)||(1859066-1859222)
chr8 (45-136)||(41688238-41688330)
chr8 (109-208)||(23565132-23565232)
chr8 (155-220)||(19392806-19392871)
chr8 (2-160)||(31268340-31268498)
[»] chr7 (64 HSPs)
chr7 (9-220)||(21224444-21224657)
chr7 (9-219)||(24597607-24597819)
chr7 (9-220)||(20636618-20636831)
chr7 (9-218)||(2331015-2331225)
chr7 (17-219)||(19195313-19195517)
chr7 (9-206)||(41452341-41452540)
chr7 (5-209)||(3562521-3562726)
chr7 (9-209)||(27869287-27869489)
chr7 (9-219)||(42271333-42271544)
chr7 (17-221)||(35337622-35337827)
chr7 (40-208)||(48176086-48176255)
chr7 (9-220)||(8526795-8527007)
chr7 (49-220)||(20638490-20638663)
chr7 (5-221)||(31493909-31494126)
chr7 (9-220)||(19919695-19919906)
chr7 (17-219)||(17305764-17305969)
chr7 (9-208)||(13577878-13578077)
chr7 (47-209)||(18754396-18754560)
chr7 (17-219)||(36746603-36746806)
chr7 (9-208)||(11843270-11843470)
chr7 (2-220)||(44077955-44078175)
chr7 (40-219)||(10655330-10655510)
chr7 (4-220)||(26385262-26385478)
chr7 (2-221)||(21225634-21225851)
chr7 (8-124)||(39440211-39440328)
chr7 (39-143)||(10023906-10024010)
chr7 (9-134)||(4193637-4193762)
chr7 (4-221)||(14624606-14624819)
chr7 (45-218)||(25002712-25002883)
chr7 (4-217)||(39181939-39182151)
chr7 (38-219)||(26126255-26126437)
chr7 (50-220)||(9157183-9157351)
chr7 (2-160)||(3403136-3403295)
chr7 (39-216)||(24448165-24448339)
chr7 (38-221)||(5111440-5111622)
chr7 (7-136)||(24464660-24464790)
chr7 (17-160)||(23439654-23439798)
chr7 (38-160)||(4571464-4571585)
chr7 (17-128)||(15681722-15681834)
chr7 (2-85)||(6650646-6650729)
chr7 (2-95)||(5087121-5087215)
chr7 (109-221)||(6650542-6650653)
chr7 (155-221)||(27869194-27869260)
chr7 (40-136)||(3769489-3769586)
chr7 (79-136)||(6798076-6798133)
chr7 (17-141)||(23461121-23461246)
chr7 (5-136)||(43251349-43251482)
chr7 (2-113)||(9822185-9822296)
chr7 (2-113)||(10724110-10724221)
chr7 (15-136)||(19493404-19493524)
chr7 (167-221)||(20636870-20636924)
chr7 (9-206)||(33237505-33237703)
chr7 (155-221)||(39182173-39182239)
chr7 (155-220)||(24597516-24597581)
chr7 (88-136)||(15681682-15681730)
chr7 (17-160)||(23473050-23473194)
chr7 (153-221)||(25002943-25003011)
chr7 (50-126)||(29051714-29051789)
chr7 (168-220)||(39440119-39440171)
chr7 (153-220)||(21810079-21810145)
chr7 (153-220)||(24448044-24448111)
chr7 (155-221)||(8527034-8527100)
chr7 (2-102)||(7365341-7365442)
chr7 (13-65)||(46267342-46267394)
[»] scaffold0607 (1 HSPs)
scaffold0607 (9-220)||(2141-2352)
[»] scaffold0179 (1 HSPs)
scaffold0179 (9-221)||(5742-5955)
[»] scaffold0025 (2 HSPs)
scaffold0025 (9-208)||(19296-19494)
scaffold0025 (38-221)||(61812-61997)
[»] scaffold0419 (2 HSPs)
scaffold0419 (17-209)||(3060-3254)
scaffold0419 (155-219)||(2961-3025)
[»] scaffold0087 (1 HSPs)
scaffold0087 (9-221)||(25056-25270)
[»] scaffold0062 (2 HSPs)
scaffold0062 (40-220)||(49658-49840)
scaffold0062 (40-220)||(62197-62379)
[»] scaffold1202 (1 HSPs)
scaffold1202 (45-209)||(1902-2067)
[»] scaffold0001 (1 HSPs)
scaffold0001 (9-209)||(142039-142240)
[»] scaffold0267 (1 HSPs)
scaffold0267 (9-217)||(3660-3866)
[»] scaffold0406 (1 HSPs)
scaffold0406 (9-208)||(2008-2203)
[»] scaffold0060 (2 HSPs)
scaffold0060 (16-141)||(66254-66379)
scaffold0060 (171-222)||(66429-66480)
[»] scaffold0002 (2 HSPs)
scaffold0002 (9-146)||(455101-455239)
scaffold0002 (44-220)||(454928-455108)
[»] scaffold0014 (1 HSPs)
scaffold0014 (2-133)||(112214-112346)
[»] scaffold1875 (1 HSPs)
scaffold1875 (2-160)||(841-999)
[»] scaffold0174 (1 HSPs)
scaffold0174 (2-221)||(29717-29935)
[»] scaffold0150 (1 HSPs)
scaffold0150 (9-141)||(5911-6043)
[»] scaffold0291 (1 HSPs)
scaffold0291 (2-136)||(10006-10140)
[»] scaffold0007 (2 HSPs)
scaffold0007 (9-102)||(250610-250703)
scaffold0007 (155-219)||(250518-250582)
[»] scaffold0683 (1 HSPs)
scaffold0683 (97-220)||(5289-5413)
[»] scaffold0103 (1 HSPs)
scaffold0103 (2-107)||(3012-3119)
[»] scaffold0024 (1 HSPs)
scaffold0024 (9-196)||(43916-44102)
[»] scaffold0171 (1 HSPs)
scaffold0171 (2-85)||(9168-9252)
[»] scaffold0064 (1 HSPs)
scaffold0064 (13-77)||(54514-54577)


Alignment Details
Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 10293172 - 10293390
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttat 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  10293172 tcgtcctaaaaatgctgagaagacgccacatgtcttaaaaaagaggtcataatcgcaactttttggaaagataaggagtcaaaaaacatatttcccttat 10293271  T
Q  102 gttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggc 201  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| |    
T  10293272 gttaggaggtcaaaagagcatatttcccaaaacatagggggtcatttttgccattttttaatagcgggtcaaaatcacaacattttgaaacttagtggac 10293371  T
Q  202 gaaaagtgcaatttagcct 220  Q
    |||||||||||||||||||    
T  10293372 gaaaagtgcaatttagcct 10293390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 208
Target Start/End: Original strand, 25556967 - 25557167
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||| ||||||||||| ||||| |||| ||||||||||||||||| |||||||||||     
T  25556967 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggg 25557066  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||  ||||||||||| |||||| ||||||||||| ||||||||||    
T  25557067 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggtcaaaatcgcaacattttgaaacttagggggcgaaaag 25557166  T
Q  208 t 208  Q
    |    
T  25557167 t 25557167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 18695215 - 18695004
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  18695215 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 18695116  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||| ||||||| |||| |||  ||||||||||  ||||||||||| |||||| || |||||||| |||||||||    
T  18695115 ggtcaaaagagcatatttccctaaacata-ggggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaa 18695017  T
Q  207 gtgcaatttagcc 219  Q
    ||| | |||||||    
T  18695016 gtgaagtttagcc 18695004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 16901089 - 16901272
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||    
T  16901089 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagga 16901188  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaac 192  Q
    |||||||||||||||||||| |||||||| ||||||| |||| ||| ||||||||||  ||||||||||| |||||| |||||||    
T  16901189 ggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatttttttaatagggggtcaaaatcgcaacattttgaaac 16901272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 245806 - 245606
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  245806 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 245707  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||||||||||||||||| |||||||| ||||||| |||| ||| ||||||||||  ||| ||||||  ||| || ||||||||||| ||||||||||    
T  245706 ggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatttttttaatagggggccaaaattgcaatattttgaaacttagagggcgaaaag 245608  T
Q  208 tg 209  Q
    ||    
T  245607 tg 245606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 40428724 - 40428941
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttat 101  Q
    |||||| |||| ||||||||||||| ||| ||||  |||||||||||||||||||||| |||||| ||||| |||| |||||||| |||||||| |||||    
T  40428724 tcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaattttttgtaaagataaggggtcaaaaagcatatttcccttat 40428823  T
Q  102 gttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccat--tttttaataacgggtcaaaatcacaacatgttgaaacttagtgg 199  Q
    ||||||||||||||||| ||||||||| |||||| ||||| | | |||| ||||  |||||||||  ||||||||||| |||||| ||||||||||| ||    
T  40428824 gttaggaggtcaaaagaacatatttccctaaacacagggg-tgacttttgccatattttttaatag-gggtcaaaatcgcaacattttgaaacttagagg 40428921  T
Q  200 gcgaaaagtgcaatttagcc 219  Q
    |||||||||| | |||||||    
T  40428922 gcgaaaagtgaagtttagcc 40428941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 160
Target Start/End: Original strand, 16307567 - 16307720
Alignment:
Q  8 taaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgtta-g 106  Q
    ||||| ||||||||||||| ||||||||  ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||  ||||||||| |    
T  16307567 taaaattgctgagaagacgccacatgtccaaaaaaaggggtcataattgcaactttttgtaaagataaggagtcaaaaaacatattttccttatgttagg 16307666  T
Q  107 gaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    | |||||||||||||||||||| |||||||||||||||| |||| | |||||||    
T  16307667 ggggtcaaaagagcatatttccctaaacatagggggtcacttttgcaatttttt 16307720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 36641355 - 36641142
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||  ||||  ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| ||||||||||||    
T  36641355 aaaattgctgagaagacgccatgtgtcccaaaaaagggatcataatcgcaactttttataaagataacgggtcaaaaagcatatttcccttatgttagga 36641256  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||  |||||||||||| ||| |||| |||  ||||||||||  ||  ||||||||||| || |||||||||||  ||||||||    
T  36641255 ggtcaaaagagcatatttctctaaacataggggctcacttttgccattttttttaataggggaccaaaatcacaatattttgaaacttagaaggcgaaaa 36641156  T
Q  207 gtgcaatttagcct 220  Q
    ||| | ||||||||    
T  36641155 gtgaagtttagcct 36641142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 26639137 - 26639343
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||| ||||  ||||||| || |||||| ||||||||||| ||||| |||| |||||||  |||||||| ||||||||||||||||||||    
T  26639137 tgagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataaggggtcaaaacgcatatttcccttatgttaggaggtcaaaa 26639236  T
Q  117 gagcatatttccttaaacatagggggtcatttttcccatttttt--aataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatt 214  Q
    |||||||||||| |||||||| ||||||| |||| |||||||||  || |  ||  ||||||| |||||| ||||||||||| || ||||||||| | ||    
T  26639237 gagcatatttccctaaacatatggggtcacttttgccattttttttaacaggggaccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtt 26639336  T
Q  215 tagcctt 221  Q
    |||||||    
T  26639337 tagcctt 26639343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 31055437 - 31055557
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    |||||||||||||||||||| |||||| ||||| |||| ||||||||||||||||| ||||||||| | |||||||||||||||||||| ||||||||||    
T  31055437 aaaaggggtcataatcgcaattttttgtaaagataaggggtcaaaaaacatatttcccttatgttaaggggtcaaaagagcatatttccctaaacatagg 31055536  T
Q  140 gggtcatttttcccatttttt 160  Q
    |||||| |||| |||||||||    
T  31055537 gggtcacttttgccatttttt 31055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 38408809 - 38408628
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    |||| |||||||||| ||||||||||| ||||| |||| ||||||||||||||||| ||||||||| | |||||||||||||||||||  ||||||||||    
T  38408809 aaaatgggtcataatagcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtta-gtggtcaaaagagcatatttctctaaacatagg 38408711  T
Q  140 gggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||| |||| |||  ||||||||||  ||| ||||||| ||| || ||||||||||| || ||||||||| | ||||||||    
T  38408710 gggtcacttttgccattttttttaatagggggccaaaatcgcaatattttgaaacttaggggacgaaaagtggagtttagcct 38408628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 10379483 - 10379296
Alignment:
Q  19 agaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaaga 118  Q
    |||||| | ||| ||||| | ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| ||||||||||    
T  10379483 agaagatgccacttgtctcagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagg-ggtcaaaaga 10379385  T
Q  119 gcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||| | |||||||||| ||||| |||| | | ||||||||||| ||| ||||||   ||||| || |||||||| || ||||||    
T  10379384 gcatattttcctaaacataggaggtcacttttgctatttttttaataaggggccaaaattgtaacattttaaaacttaggggacgaaaa 10379296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 8645935 - 8645795
Alignment:
Q  83 aaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcaca 180  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| |||| |||  ||||||||||  ||||||||||| ||    
T  8645935 aaaatcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacattgggggtcaattttgccattttttttaatagggggtcaaaatcgca 8645836  T
Q  181 acatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    |||| |||||||| || |||||||||||| | |||||||||    
T  8645835 acattttgaaactaagagggcgaaaagtgaagtttagcctt 8645795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 19169559 - 19169404
Alignment:
Q  5 tcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgtt 104  Q
    |||||||| ||||||||||||| ||| |||   |||||| ||| |||||| ||||||||||| ||||| |||| |||||||| |||||||| ||||||||    
T  19169559 tcctaaaattgctgagaagacgccacgtgttcaaaaaaatgggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgtt 19169460  T
Q  105 aggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    | ||||||||| |||||||||| | |||||||||||| ||| |||| |||||||||    
T  19169459 aagaggtcaaatgagcatattttcctaaacataggggatcacttttgccatttttt 19169404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 23765522 - 23765694
Alignment:
Q  49 cataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcattt 148  Q
    |||||||||||||||||| ||||| ||    ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| ||    
T  23765522 cataatcgcaactttttgtaaagataaatgatcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcactt 23765620  T
Q  149 ttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||  ||  ||||||||||  ||| ||||||  |||||| || |||||||| |||||||||||| | ||||||||    
T  23765621 ttatcattttttttaatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcct 23765694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 23815370 - 23815542
Alignment:
Q  49 cataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcattt 148  Q
    |||||||||||||||||| ||||| ||    ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| ||    
T  23815370 cataatcgcaactttttgtaaagataaatgatcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcactt 23815468  T
Q  149 ttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||  ||  ||||||||||  ||| ||||||  |||||| || |||||||| |||||||||||| | ||||||||    
T  23815469 ttatcattttttttaatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcct 23815542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 15885297 - 15885465
Alignment:
Q  49 cataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcattt 148  Q
    |||||||| ||||||||| ||||| |||| ||||| ||||||||||| ||||||||| ||||||||||||| |||||||| ||||||||  ||| |||||    
T  15885297 cataatcgaaactttttgtaaagataagg-gtcaacaaacatatttcccttatgttaagaggtcaaaagagaatatttccataaacataaagggacattt 15885395  T
Q  149 ttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttag 217  Q
    || ||| ||||||||||| ||  ||||||  |||||| ||||||||||| || | ||||||||| |||||    
T  15885396 ttgccatttttttaataagggaccaaaatagcaacattttgaaacttaggggacaaaaagtgcagtttag 15885465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 38476555 - 38476703
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctctta 100  Q
    |||||| |||| ||||||||||||| ||| ||||  ||||||||| |||||||||||||||||||  |||| |||| ||||||| | |||||||| ||||    
T  38476555 tcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaaggg-tcataatcgcaactttttgagaagataaggggtcaaaagatcatatttccctta 38476653  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcattttt 150  Q
    ||||| | |||||||||||||||||||| |||| ||||||||||| ||||    
T  38476654 tgttatggggtcaaaagagcatatttccctaaatatagggggtcactttt 38476703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 7835913 - 7835792
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||||||||| |||||| ||| ||||||| || || |||| ||||| |||| ||||||||||||||||  ||||||||| | ||||||||    
T  7835913 tgagaagacgccacatgtctaaaaaaaagggccataatcccacctctttgtaaagataaggggtcaaaaaacatattttccttatgttatg-ggtcaaaa 7835815  T
Q  117 gagcatatttccttaaacatagg 139  Q
    |||||||||||| ||||||||||    
T  7835814 gagcatatttccctaaacatagg 7835792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 17825599 - 17825716
Alignment:
Q  19 agaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttaggaggtcaaaag 117  Q
    |||||||| ||| ||||  |||||||||| ||||||||||||||||||  |||| || | ||||||| |||||||||||||||||||||| |||||||||    
T  17825599 agaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgacaagataaagggtcaaaagaacatatttctcttatgttagg-ggtcaaaag 17825697  T
Q  118 agcatatttccttaaacat 136  Q
    ||||||||||| |||||||    
T  17825698 agcatatttccctaaacat 17825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 2373364 - 2373221
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctctta 100  Q
    |||||| |||| |||| |||||||| ||| ||||   ||||||||||||||||||||| ||||||  || | |||| |||| || | |||||||| ||||    
T  2373364 tcgtcccaaaattgctaagaagacgccacgtgtccccaaaaaggggtcataatcgcaaatttttgagaaaataaggggtcataatatcatatttccctta 2373265  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtca 145  Q
    ||||| | |||||||||||||||||| ||||||||||||||||||    
T  2373264 tgttatg-ggtcaaaagagcatattttcttaaacatagggggtca 2373221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 41663608 - 41663743
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctctta 100  Q
    |||||| |||| |||| |||||| | ||| ||||  |||||||||| ||||||||||| ||||||  || | || ||||||||||| |||||||| ||||    
T  41663608 tcgtcccaaaattgctaagaagatgccacgtgtcccaaaaaaggggccataatcgcaattttttgagaaaataaagagtcaaaaaatcatatttccctta 41663707  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    ||||| | |||||||||||||||||||| |||||||    
T  41663708 tgttatggggtcaaaagagcatatttccctaaacat 41663743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 23040069 - 23040170
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgtta--ggaggtcaaaagagcatatttccttaaac 134  Q
    |||||| ||||||||||||||||||||||  |||| |||| ||||||| | |||||||| |||||||||  ||||||||||||||||||||||| |||||    
T  23040069 aaaaaaagggtcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttaggggaggtcaaaagagcatatttccctaaac 23040168  T
Q  135 at 136  Q
    ||    
T  23040169 at 23040170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 219
Target Start/End: Original strand, 35302096 - 35302217
Alignment:
Q  98 ttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttt-taataacgggtcaaaatcacaacatgttgaaacttag 196  Q
    |||||||||| |||||||||||||||||||| |||| || |||||||| |||| |||||||| |||||  ||||||||||| |||||| ||||||||||     
T  35302096 ttatgttagggggtcaaaagagcatatttccctaaatat-gggggtcacttttgccatttttataatagagggtcaaaatcgcaacattttgaaacttaa 35302194  T
Q  197 tgggcgaaaagtgcaatttagcc 219  Q
     ||| ||||| |||| |||||||    
T  35302195 ggggagaaaaatgcagtttagcc 35302217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 224
Target Start/End: Original strand, 37961371 - 37961557
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatag 138  Q
    |||||||| |||||| |||||||||||  |||  |||| ||||||| | ||| |||| ||||||||||| |||||||||||| ||||||| ||||||| |    
T  37961371 aaaaggggccataattgcaactttttgagaagttaaggggtcaaaagatcatttttcccttatgttaggcggtcaaaagagcgtatttccctaaacatgg 37961470  T
Q  139 ggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagccttgat 224  Q
    ||| ||| |||| | |  ||||||||| | | | ||||||  |||||| ||||||||||| ||| |||||||||| |||| |||||||    
T  37961471 gggatcacttttgctattttttttaat-aggagccaaaattgcaacattttgaaacttagggggtgaaaagtgcagtttaaccttgat 37961557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 220
Target Start/End: Complemental strand, 34125236 - 34125058
Alignment:
Q  45 gggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggt 143  Q
    ||||||||||||||||||||||  |||| |||  ||||||  | |||||||  ||||||||||| | |||||||||||||||||| |||||||   ||||    
T  34125236 gggtcataatcgcaactttttgagaagataagaggtcaaatgatcatattttccttatgttaggggatcaaaagagcatatttccctaaacatgaagggt 34125137  T
Q  144 ca--tttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||  ||| |||  ||||||||||| ||||||||||| |||||| || |||||||   | |||||| |||||| ||||||    
T  34125136 cacttttatccttttttttaataaagggtcaaaatcgcaacattttaaaacttaagagacgaaaaatgcaatatagcct 34125058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 462983 - 462851
Alignment:
Q  4 gtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatg 102  Q
    |||| |||| || ||| |||||| ||| ||||| |||||   ||||||||||||||||||||| ||||| |||| ||||||| ||||||||||||||||     
T  462983 gtccaaaaattgttgaaaagacgccacgtgtctaaaaaagaaggtcataatcgcaactttttgtaaagataaggggtcaaaagaacatatttctcttata 462884  T
Q  103 ttaggaggtcaaaagagcatatttccttaaacat 136  Q
    |||  |||||||||  |||||||||| |||||||    
T  462883 tta-taggtcaaaaaggcatatttccctaaacat 462851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 7187388 - 7187252
Alignment:
Q  21 aagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagc 120  Q
    |||||| ||||||||  ||||||||| ||||||||||||||||||| ||| | ||   |||| |||||||||||| ||||||||||  ||||||||||      
T  7187388 aagacgccacatgtcccaaaaaaggg-tcataatcgcaactttttgtaaaaataattggtcataaaacatatttcccttatgttagagggtcaaaagaat 7187290  T
Q  121 atatttccttaaacatagggggtcatttttcccatttttt 160  Q
    |||||||| |||||||  ||||||| |||| ||| |||||    
T  7187289 atatttccctaaacat--ggggtcaattttgccaattttt 7187252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 209
Target Start/End: Original strand, 17704708 - 17704876
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacata 137  Q
    |||||||||| ||||||  |||||||||| ||||| || | ||||||||  ||||||| ||||||||| | |||||||||||||||||| | |||||||     
T  17704708 aaaaaaggggccataatttcaactttttgtaaagataaagggtcaaaaagtatatttcccttatgttatg-ggtcaaaagagcatattttcctaaacat- 17704805  T
Q  138 gggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtg 209  Q
      |||| | |||| | | ||||||||||  ||| ||||||| ||| || ||||||||||| || |||||||||    
T  17704806 --gggttacttttgctatttttttaatagggggccaaaatcgcaatattttgaaacttaggggacgaaaagtg 17704876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 208
Target Start/End: Original strand, 32465986 - 32466125
Alignment:
Q  68 aaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataac 166  Q
    ||||| |||| |||||||||| || || |||||| ||||| |||||||||||||||||| | ||||||| | |  |||||||| ||| ||||||||||      
T  32465986 aaagataaggggtcaaaaaacttaattatcttatattagg-ggtcaaaagagcatattttcctaaacat-gagaatcatttttgccacttttttaatagg 32466083  T
Q  167 gggtcaaaatcacaacatgttgaaacttagtgggcgaaaagt 208  Q
    || |||||||| |||||| ||||||||||| || ||||||||    
T  32466084 ggatcaaaatcgcaacattttgaaacttaggggacgaaaagt 32466125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 31648174 - 31648054
Alignment:
Q  102 gttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtggg 200  Q
    |||||| |||||||| ||||||||||| |||||||| ||||||| |||| ||| ||||||||||  |||  |||||| |||||| |||||| |||  ||     
T  31648174 gttagggggtcaaaaaagcatatttccctaaacataaggggtcacttttgccatttttttaatagggggcgaaaatcgcaacattttgaaatttatggga 31648075  T
Q  201 cgaaaagtgcaatttagcctt 221  Q
    ||||||||| | |||||||||    
T  31648074 cgaaaagtggagtttagcctt 31648054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 26639101 - 26639034
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagccttg 222  Q
    ||||||||||  | |||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||    
T  26639101 ttttttaatagggagtcaaaatcacaacattttgaaacatagggggcgaaaagtgcactttagccttg 26639034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 16901061 - 16900995
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    ||||||||||  ||||||||||| |||||| ||||||| |||  ||||||||||||| |||||||||    
T  16901061 ttttttaatagggggtcaaaatcgcaacattttgaaacataggaggcgaaaagtgcagtttagcctt 16900995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 20654050 - 20654099
Alignment:
Q  171 caaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||||||||||| ||||||||||| || ||||||||||| ||||||||    
T  20654050 caaaatcacaacattttgaaacttaggggtcgaaaagtgcagtttagcct 20654099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 20653952 - 20653905
Alignment:
Q  88 catatttctcttatgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    |||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  20653952 catatttcacttatgttagg-ggtcaaaagagcatatttccctaaacat 20653905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 24025131 - 24025019
Alignment:
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagt 208  Q
    |||||||||||||||||||| |||| |||| |||  |   || |  ||||||||||  ||| ||||||| ||| || ||||||||||| ||||||| |||    
T  24025131 ggtcaaaagagcatatttccctaaagatagagggcaaaaattacatttttttaatagggggccaaaatcgcaatattttgaaacttagggggcgaatagt 24025032  T
Q  209 gcaatttagcctt 221  Q
    ||| |||||||||    
T  24025031 gcactttagcctt 24025019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 18695242 - 18695307
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||  ||| ||||||| ||| || ||||||| ||| |||||||||||||| ||||||||    
T  18695242 ttttttaatagggggccaaaatcgcaatattttgaaacatagggggcgaaaagtgcactttagcct 18695307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 7835768 - 7835716
Alignment:
Q  171 caaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagccttga 223  Q
    |||||||||||||| || |||||||| |||||||||||| | ||||| |||||    
T  7835768 caaaatcacaacattttaaaacttagagggcgaaaagtgaagtttagtcttga 7835716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 38322409 - 38322357
Alignment:
Q  13 atgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaacttttt 65  Q
    ||||||||||| || ||| ||||  ||||||||||||| ||||||||||||||    
T  38322409 atgctgagaagccgccacgtgtcccaaaaaaggggtcaaaatcgcaacttttt 38322357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 6e-64; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 17 - 221
Target Start/End: Complemental strand, 32451930 - 32451724
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||||||||||    
T  32451930 tgagaagacgccacatgtctcaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaa 32451831  T
Q  117 gagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatt 214  Q
    |||||||||||  |||||||||||||||| |||| |||  ||||||||||  ||| |||||||||||||| ||||||||||| |||||||||||| | ||    
T  32451830 gagcatatttctataaacatagggggtcacttttgccattttttttaatagggggccaaaatcacaacattttgaaacttagagggcgaaaagtgaagtt 32451731  T
Q  215 tagcctt 221  Q
    |||||||    
T  32451730 tagcctt 32451724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 4597504 - 4597710
Alignment:
Q  16 ctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaa 115  Q
    |||| |||||| ||||||||  |||||||||| |||||| ||||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||||||    
T  4597504 ctgaaaagacgccacatgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaa 4597603  T
Q  116 agagcatatttccttaaacatagggggtcatttttcccattttt--taataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaat 213  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||  |||||  ||| ||||||  |||||| ||||||||||| |||||||||||| | |    
T  4597604 agagcatatttccctaaacatagggggtcatttttgccattttttataatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagt 4597703  T
Q  214 ttagcct 220  Q
    |||||||    
T  4597704 ttagcct 4597710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 17 - 220
Target Start/End: Complemental strand, 24051212 - 24051008
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||| ||||  ||||||| ||||||||||||||||||||| ||| | |||| ||||||||  ||||||||||||||||||||||||||||    
T  24051212 tgagaagacgccacgtgtcccaaaaaagaggtcataatcgcaactttttgtaaatataaggggtcaaaaagtatatttctcttatgttaggaggtcaaaa 24051113  T
Q  117 gagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaattt 215  Q
    |||||||||||| |||||||||||||||| |||| ||| ||||||||||  ||| ||||||| |||||| ||||||||||| |||||||||||| | |||    
T  24051112 gagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagttt 24051013  T
Q  216 agcct 220  Q
    |||||    
T  24051012 agcct 24051008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 220
Target Start/End: Complemental strand, 18791561 - 18791357
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||| |||| ||||||||||| |||||||||||||||||| |||||  ||| |||||||| |||||||| ||||||||||| ||||||||    
T  18791561 tgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagatgaggggtcaaaaagcatatttcccttatgttagggggtcaaaa 18791462  T
Q  117 gagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaattt 215  Q
    |||||||||||| |||||||||||||||| |||| ||| ||||||||||  ||| ||||||| |||||| || |||||||| |||||||||||| | |||    
T  18791461 gagcatatttccctaaacatagggggtcacttttgccatttttttaatagagggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagttt 18791362  T
Q  216 agcct 220  Q
    |||||    
T  18791361 agcct 18791357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 26710406 - 26710611
Alignment:
Q  16 ctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaa 115  Q
    ||||||||| | ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||  |||||||||||||||||||    
T  26710406 ctgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatattttccttatgttaggaggtcaaa 26710505  T
Q  116 agagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaat 213  Q
    ||||||||||||| |||||||||||||||  |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||| |||||||||||| | |    
T  26710506 agagcatatttccctaaacatagggggtcgcttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagt 26710605  T
Q  214 ttagcc 219  Q
    ||||||    
T  26710606 ttagcc 26710611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 24603573 - 24603361
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||  ||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  24603573 aaaattgctgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 24603474  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||  ||||||| |||||| ||||||||||  || ||||||    
T  24603473 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggagcaaaatcgcaacattttgaaacttaaaggacgaaaa 24603374  T
Q  207 gtgcaatttagcc 219  Q
    ||| | |||||||    
T  24603373 gtgaagtttagcc 24603361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 40 - 208
Target Start/End: Complemental strand, 3118860 - 3118692
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    |||||||||||||||||||| |||||| ||||| |||  ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||     
T  3118860 aaaaggggtcataatcgcaaatttttgtaaagataagaggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacataga 3118761  T
Q  140 gggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagt 208  Q
    |||||| |||| |||||||||||||  || ||||||||  ||||| |||||||||||  ||||||||||    
T  3118760 gggtcacttttgccattttttaataggggatcaaaatcgtaacattttgaaacttaggaggcgaaaagt 3118692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 25819896 - 25819695
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  ||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  25819896 aaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 25819797  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    ||||| ||||| |||||||| |||||||| ||||||| |||| |||  ||||||||||  ||| ||||||  |||||| || |||||||| |||||||||    
T  25819796 ggtcagaagagtatatttccctaaacata-ggggtcacttttgccattttttttaatagggggccaaaattgcaacattttaaaacttagagggcgaaaa 25819698  T
Q  207 gtg 209  Q
    |||    
T  25819697 gtg 25819695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 220
Target Start/End: Original strand, 22968283 - 22968458
Alignment:
Q  45 gggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtc 144  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  22968283 gggtcataatcgcaactttttgtaaagataagg-gtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtc 22968381  T
Q  145 atttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    | |||| |||  ||||||||| | ||| ||||||| |||||| ||||||||||  |||||||||||| | ||||||||    
T  22968382 acttttgccattttttttaat-aggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagcct 22968458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 220
Target Start/End: Complemental strand, 23820110 - 23819935
Alignment:
Q  45 gggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtc 144  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  23820110 gggtcataatcgcaactttttgtaaagataagg-gtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtc 23820012  T
Q  145 atttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    | |||| |||  ||||||||| | ||| ||||||| |||||| ||||||||||  |||||||||||| | ||||||||    
T  23820011 acttttgccattttttttaat-aggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagcct 23819935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 38 - 220
Target Start/End: Complemental strand, 8412941 - 8412757
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacata 137  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||    
T  8412941 aaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttctctaaacata 8412842  T
Q  138 gggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||||  |||| |||  ||||||||||  | | ||||||| |||||| ||||||||||  ||||| |||||| | ||||||||    
T  8412841 gggggtcgcttttgccattttttttaatagggagccaaaatcgcaacattttgaaacttaaggggcggaaagtggactttagcct 8412757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 15298696 - 15298500
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  ||||||||   |||||||||||||||||| ||||| ||||  |||||||||||||||  ||||||||||||    
T  15298696 aaaattgctgagaagacgccacttgtcccaaaaaaggac-cataatcgcaactttttgtaaagataagggatcaaaaaacatattttccttatgttagga 15298598  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaa 205  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||  ||| |||| || |||||| ||||||||||| ||||||||    
T  15298597 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggccaaactcgcaacattttgaaacttagagggcgaaa 15298500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 34834137 - 34833986
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||| | ||||||||| ||||| || | ||||||||||||||||| ||||||||||||    
T  34834137 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgtaactttttgtaaagataacgggtcaaaaaacatatttcccttatgttagga 34834038  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  34834037 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttt 34833986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 22269610 - 22269410
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||| ||||  |||||||||| ||||| | |||||||||| ||||| |||| ||||||||||||||||| ||||||||| | ||||||||    
T  22269610 tgagaagacgccacgtgtcccaaaaaaggggccataaacacaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaag-ggtcaaaa 22269512  T
Q  117 gagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaattta 216  Q
    || ||||||||| |||||||| ||||||| |||| |||||||||||||  ||| ||||||| ||| || ||||||||||| || ||||||||||| ||||    
T  22269511 gaacatatttccctaaacata-ggggtcacttttgccattttttaatagagggccaaaatcgcaatattttgaaacttagaggacgaaaagtgcagttta 22269413  T
Q  217 gcc 219  Q
    |||    
T  22269412 gcc 22269410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 31211006 - 31210793
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||  ||| ||||  |||||||| |  ||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  31211006 aaaattgctgagaagacaccacgtgtcccaaaaaaggtgctataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 31210907  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||| | |||||||||||||||| ||||  ||  ||||||||||   || ||||||| |||||| || |||||||| |||||||||    
T  31210906 ggtcaaaagagcatattttcctaaacatagggggtcacttttgtcattttttttaataggaggccaaaatcgcaacattttaaaacttagagggcgaaaa 31210807  T
Q  207 gtgcaatttagcct 220  Q
    ||| | ||||||||    
T  31210806 gtgaagtttagcct 31210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 14572270 - 14572481
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||| | ||||||||  |||||| ||| |||||||||||||||||  ||||| |||| |||||||| |||||||| ||||||||||||    
T  14572270 aaaattgctgagaagatgccacatgtcccaaaaaaagggccataatcgcaactttttataaagataaggggtcaaaaagcatatttcccttatgttagga 14572369  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
     ||||||||||||||||||| |||||||| ||||||| |||| ||| ||||||||||  ||| ||||||  ||| || || |||||||| ||||||||||    
T  14572370 tgtcaaaagagcatatttccctaaacata-ggggtcacttttgccatttttttaatagggggccaaaattgcaatattttaaaacttagagggcgaaaag 14572468  T
Q  208 tgcaatttagcct 220  Q
    || | ||||||||    
T  14572469 tggactttagcct 14572481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 35102583 - 35102716
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||| ||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  35102583 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 35102682  T
Q  109 ggtcaaaagagcatatttccttaaacataggggg 142  Q
    |||||||||||||||||||| |||||||||||||    
T  35102683 ggtcaaaagagcatatttccctaaacataggggg 35102716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 18749297 - 18749432
Alignment:
Q  86 aacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaaca 183  Q
    |||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||||||||||| |||||    
T  18749297 aacatatttcccttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaatcgcaaca 18749396  T
Q  184 tgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    | ||||||||||| |||||||||||| | |||||||    
T  18749397 ttttgaaacttagagggcgaaaagtgaagtttagcc 18749432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 19282298 - 19282454
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttat 101  Q
    |||||| |||| ||||||||||| | ||||||||   |||||||||||||||||||||||||||| ||||| |||| |||||||  |||||||| |||||    
T  19282298 tcgtcccaaaattgctgagaagaagtcacatgtcc--aaaaaggggtcataatcgcaactttttgaaaagataaggggtcaaaatgcatatttcccttat 19282395  T
Q  102 gttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    |||||||| |||||| ||||||||| |||||||||| ||||||| ||||  ||||||||    
T  19282396 gttaggagttcaaaatagcatatttacttaaacataaggggtcacttttgtcatttttt 19282454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 26240169 - 26239956
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgtta-g 106  Q
    |||| ||| ||||||||| ||| |||| || ||||||||||||||| ||||||||||   |||| |||| ||||||| | |||||||| ||||||||| |    
T  26240169 aaaactgccgagaagacgccacgtgtcctataaaaggggtcataattgcaacttttttagaagataaggggtcaaaagatcatatttcccttatgttaag 26240070  T
Q  107 gaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    | |||||||||||||||||||| |||||||  ||||||| ||||  |||||||| ||| |||| |||||||||||| | || |||||||  ||| |||||    
T  26240069 ggggtcaaaagagcatatttccgtaaacatgaggggtcacttttgtcattttttcatagcgggacaaaatcacaactttttaaaacttaaggggtgaaaa 26239970  T
Q  207 gtgcaatttagcct 220  Q
    ||||  ||||||||    
T  26239969 gtgctctttagcct 26239956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 42 - 218
Target Start/End: Original strand, 4013791 - 4013968
Alignment:
Q  42 aaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacataggg 140  Q
    |||||| |||||||||||| |||||  |||| |||| ||||||| | |||||||| ||||| ||||| |||||||||||||||||||| ||||||| |||    
T  4013791 aaggggccataatcgcaacattttgagaagataaggggtcaaaagatcatatttcccttatattagggggtcaaaagagcatatttccctaaacat-ggg 4013889  T
Q  141 ggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagc 218  Q
    ||||| ||||  || ||||||||||  ||| ||||||| |||||| ||||||||||| || ||||||||||| ||||||    
T  4013890 ggtcacttttgacatttttttaatagggggccaaaatcgcaacattttgaaacttaggggacgaaaagtgcagtttagc 4013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 2058993 - 2059126
Alignment:
Q  88 catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgtt 187  Q
    |||||||| |||||||||||  ||||||| ||||||||||| |||||||   |||||| |||| |||||||||||||  ||||||||||| |||||| ||    
T  2058993 catatttcccttatgttagggtgtcaaaatagcatatttccctaaacatgaagggtcacttttgccattttttaatagggggtcaaaatcgcaacatttt 2059092  T
Q  188 gaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
     ||| |||| | ||||||| ||||||||||||||    
T  2059093 aaaatttagggagcgaaaaatgcaatttagcctt 2059126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 24615778 - 24615994
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaa-aggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctctta 100  Q
    |||||| |||| ||||||||| ||| ||||||||  ||||| | |||||||||||||||||||| | ||||| || | |||||||| |||||||||| ||    
T  24615778 tcgtccaaaaattgctgagaaaacgccacatgtcccaaaaataagggtcataatcgcaacttttagtaaagagaatgggtcaaaaagcatatttctcata 24615877  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtggg 200  Q
    ||||||| |||||||||||||||||||| ||| | |  ||||||| |||| |  |||||||| || |||  |||||  |||||| || ||||||||  ||    
T  24615878 tgttagg-ggtcaaaagagcatatttccctaatcgt--ggggtcactttttcatttttttaacaaggggctaaaattgcaacattttaaaacttaggagg 24615974  T
Q  201 cgaaaagtgcaatttagcct 220  Q
    | ||||||| | ||||||||    
T  24615975 caaaaagtgaagtttagcct 24615994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 32682419 - 32682582
Alignment:
Q  58 aactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca-tt 156  Q
    ||||||||| ||||| |||| |||||||||||||||||  |||||||| |||||||||||||||||||||| |||||||| ||||||| |||| | | ||    
T  32682419 aactttttgtaaagataaggggtcaaaaaacatatttcctttatgttatgaggtcaaaagagcatatttccctaaacata-ggggtcacttttgctattt 32682517  T
Q  157 ttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    ||||||||  |   ||||||  |||||| || |||||||| ||| |||||||| | |||||||||    
T  32682518 ttttaatagagaaccaaaattgcaacattttaaaacttagagggtgaaaagtgaagtttagcctt 32682582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 16415417 - 16415555
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctctta 100  Q
    |||||| |||| ||||||||||||||||  |||  ||||||| |||| ||||||||||||||||   |||| |||  ||||||| | |||||||| ||||    
T  16415417 tcgtcccaaaattgctgagaagacgaca--tgttctaaaaaatgggttataatcgcaacttttttagaagataagcggtcaaaatatcatatttccctta 16415514  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggg 141  Q
    ||||||| ||||||||||  |||||||| ||||||||||||    
T  16415515 tgttaggcggtcaaaagaatatatttccctaaacatagggg 16415555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 4371065 - 4370959
Alignment:
Q  54 tcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcc 152  Q
    ||||||||||||| ||||| |||| ||||||  | |||||||| ||||||||||| |||||||||||||||||||| ||||||| | |||||| |||| |    
T  4371065 tcgcaactttttgtaaagataaggggtcaaaggagcatatttcccttatgttagg-ggtcaaaagagcatatttccctaaacatggagggtcacttttgc 4370967  T
Q  153 catttttt 160  Q
    ||||||||    
T  4370966 catttttt 4370959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 23124817 - 23124888
Alignment:
Q  14 tgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa 85  Q
    ||||||||||||| |||||||| | |||||||||||||||||||||||||||| ||||| |||| |||||||    
T  23124817 tgctgagaagacgccacatgtcctcaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa 23124888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 34528367 - 34528175
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    |||||| |||| ||||||||||||  ||||||||  |||| ||  | ||||||||||||||||||  |||| |||| ||||||| | ||||||||  |||    
T  34528367 tcgtcccaaaattgctgagaagacatcacatgtcccaaaacagtcgccataatcgcaactttttgagaagataaggggtcaaaagatcatatttcattta 34528268  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttag 196  Q
    ||||||| || ||||     |||||||| ||||||||| |||||| |||| |||  ||||||||||| |||  |||||  |||||| |||||||||||    
T  34528267 tgttagggggccaaa-----atatttccctaaacatagagggtcacttttgccattttttttaataaggggctaaaatagcaacattttgaaacttag 34528175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 12427445 - 12427292
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttgg-aaagacaaggagtcaaaaaa-catatttctcttatgttag 106  Q
    |||| ||||||||||| | ||| ||||  ||| || |||||| |||||||||||||| | ||||| || | || |||||| ||||||||  ||||||||     
T  12427445 aaaattgctgagaagatggcacgtgtcccaaagaatgggtcaaaatcgcaacttttttgtaaagataaagggtaaaaaaaacatatttcctttatgttaa 12427346  T
Q  107 gaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
      | |||||||||||||||||| ||||||| |||| ||| |||| |||||||||    
T  12427345 tggttcaaaagagcatatttccctaaacatgggggatcacttttgccatttttt 12427292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 20863820 - 20863896
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa 85  Q
    |||| ||||||||||||| ||  ||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||    
T  20863820 aaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa 20863896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 2636997 - 2636890
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgt-cttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctt 99  Q
    ||||||||||| ||  ||||||||| ||||||| | || ||| ||||||||||||||||||||||| ||| | |||| ||||||| | |||||||  |||    
T  2636997 tcgtcctaaaattgaagagaagacgccacatgttcctagaaagggggtcataatcgcaactttttgtaaaaataaggggtcaaaatagcatatttacctt 2636898  T
Q  100 atgttagg 107  Q
    ||||||||    
T  2636897 atgttagg 2636890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 9241824 - 9241732
Alignment:
Q  49 cataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacataggggg 142  Q
    ||||||||||||||||||  |||| |||| ||||||| | |||||||| ||||||||||  |||||||||| ||||||||| ||| || ||||||    
T  9241824 cataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttag--ggtcaaaagaacatatttccctaagcaaaggggg 9241732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 2058926 - 2058982
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaacttttt 65  Q
    |||| |||||||||||||  ||||||| ||||| ||||||||||||| |||||||||    
T  2058926 aaaattgctgagaagacgctacatgtcctaaaacaggggtcataatcccaacttttt 2058982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 12291547 - 12291618
Alignment:
Q  47 gtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaag 117  Q
    ||||||||||||||||||||  |||| || | ||||||| | |||||||| ||||||||||| |||||||||    
T  12291547 gtcataatcgcaactttttgagaagataaagggtcaaaagatcatatttcccttatgttagggggtcaaaag 12291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 15298724 - 15298785
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaattta 216  Q
    ||||||||||| ||| ||||||| |||||| ||||||| ||| ||||||||| |||| ||||    
T  15298724 ttttttaataaggggccaaaatcgcaacattttgaaacatagagggcgaaaaatgcacttta 15298785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 35102555 - 35102490
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||  |||  |||||| |||||| ||||||| ||| |||||||||||||| ||||||||    
T  35102555 ttttttaatagggggctaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 35102490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 12293694 - 12293658
Alignment:
Q  102 gttaggaggtcaaaagagcatatttccttaaacatag 138  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  12293694 gttatgaggtcaaaagagcatatttccttaaagatag 12293658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 6e-61; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 24962165 - 24961952
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  24962165 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 24962066  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||| |||||||||||||| ||||||||||| |||||||||    
T  24962065 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcacaacattttgaaacttagagggcgaaaa 24961966  T
Q  207 gtgcaatttagcct 220  Q
    ||| | ||||||||    
T  24961965 gtgaagtttagcct 24961952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 3617011 - 3616797
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||| | ||    
T  3617011 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtgaaga 3616912  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||| |||||||||    
T  3616911 ggtcaaaagagcatatttccctaaacataggaggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaa 3616812  T
Q  207 gtgcaatttagcctt 221  Q
    ||| | |||||||||    
T  3616811 gtgaagtttagcctt 3616797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 19078017 - 19078229
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||    
T  19078017 aaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagga 19078116  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||||||||||||||||| |||||||| ||||||| |||| ||| ||||||||||  ||| ||||||  |||||| ||||||| ||| |||| |||||    
T  19078117 ggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatttttttaatagggggccaaaattgcaacattttgaaacatagagggcaaaaag 19078215  T
Q  208 tgcaatttagcctt 221  Q
    ||||  ||||||||    
T  19078216 tgcagcttagcctt 19078229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 19125907 - 19126119
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||    
T  19125907 aaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagga 19126006  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||||||||||||||||| |||||||| ||||||| |||| ||| ||||||||||  ||| ||||||  |||||| ||||||| ||| |||| |||||    
T  19126007 ggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatttttttaatagggggccaaaattgcaacattttgaaacatagagggcaaaaag 19126105  T
Q  208 tgcaatttagcctt 221  Q
    ||||  ||||||||    
T  19126106 tgcagcttagcctt 19126119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 24196480 - 24196260
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttat 101  Q
    |||||| |||| ||||||||||||| ||| ||||  |||||||||| |||| ||||||||||||| ||||| |||| |||||||| |||||||| |||||    
T  24196480 tcgtccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccatattcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttat 24196381  T
Q  102 gttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgg 199  Q
    ||||||||||||||||||||||||||  |||||||| ||||||| |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||| ||    
T  24196380 gttaggaggtcaaaagagcatatttctctaaacatatggggtcacttttgccattttttttaatagagggccaaaatcgcaacattttgaaacttagggg 24196281  T
Q  200 gcgaaaagtgcaatttagcct 220  Q
    |||||||||| | ||||||||    
T  24196280 gcgaaaagtggagtttagcct 24196260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 40 - 219
Target Start/End: Original strand, 46432339 - 46432520
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  46432339 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagg 46432438  T
Q  140 gggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    |||||| |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||  |||||||||||| | |||||||    
T  46432439 gggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtggactttagcc 46432520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 4059614 - 4059827
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||| ||  |||||||||||||||||| ||||| |||| ||||||||||||||||  ||||||||||||    
T  4059614 aaaattgctgagaagacgccacgtgtcccaaaaaatggaccataatcgcaactttttgtaaagataaggggtcaaaaaacatattttccttatgttagga 4059713  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| ||||||||| |||||| |||| |||  ||||||||||  |||  |||||| |||||| ||||||||||| |||||||||    
T  4059714 ggtcaaaagagcatatttccctaaacatagagggtcacttttgccattttttttaatagggggctaaaatcgcaacattttgaaacttagagggcgaaaa 4059813  T
Q  207 gtgcaatttagcct 220  Q
    ||| | ||||||||    
T  4059814 gtgaagtttagcct 4059827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 48471955 - 48472155
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||  |||||||||||||||||| ||||| |||| |||||||| |||||||||||||||||||||    
T  48471955 aaaattgctgagaagacgccacgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttctcttatgttagga 48472054  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagt 208  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||   |  |||  |||||  ||| || ||||||||||| |||||||||||    
T  48472055 ggtcaaaagagcatatttccctaaacatagggggtcaattttgccattttttttaatagggctaaaattgcaatattttgaaacttagagggcgaaaagt 48472154  T
Q  209 g 209  Q
    |    
T  48472155 g 48472155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 24750010 - 24749807
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| |||| |||||||| ||| |||   |||||| ||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||| ||    
T  24750010 aaaattgctaagaagacgccacgtgttccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatga 24749911  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca---ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaa 205  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||   ||||||||||  ||| ||||||| |||||| ||||||||||| || |||||    
T  24749910 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttttaatagtgggccaaaatcgcaacattttgaaacttagaggacgaaa 24749811  T
Q  206 agtg 209  Q
    ||||    
T  24749810 agtg 24749807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 28920748 - 28920956
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtc-ataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagg 107  Q
    |||| ||||||||||||| ||||||||  |||||||||| | |||||||| |||||||| ||||| |||| |||||||| ||||||      ||||||||    
T  28920748 aaaattgctgagaagacgccacatgtcccaaaaaagggggccataatcgccactttttgtaaagataaggggtcaaaaagcatatt------atgttagg 28920841  T
Q  108 aggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaa 205  Q
    ||||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||| ||||||||    
T  28920842 aggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagggggcgaaa 28920941  T
Q  206 agtgcaatttagcct 220  Q
    |||| | ||||||||    
T  28920942 agtgaagtttagcct 28920956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 40 - 219
Target Start/End: Original strand, 43706777 - 43706957
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||| | |||||||||||||||||||| ||||||||||    
T  43706777 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttatg-ggtcaaaagagcatatttccctaaacatagg 43706875  T
Q  140 gggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    |||||| |||| |||  ||||||||||  ||| ||||||| |||||| || ||| |||| |||| ||||||| | |||||||    
T  43706876 gggtcacttttgccattttttttaatagggggccaaaatcgcaacattttaaaaattagggggcaaaaagtggagtttagcc 43706957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 220
Target Start/End: Complemental strand, 29676283 - 29676078
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    ||||||| || ||| ||||  |||||||||| |||||||||||||||||  ||||| |||| |||||||| |||||||| ||||||||||||| ||| ||    
T  29676283 tgagaaggcgccacgtgtcccaaaaaaggggccataatcgcaactttttataaagataaggggtcaaaaagcatatttcacttatgttaggagatcacaa 29676184  T
Q  117 gagcatatttccttaaacatagggggtcatttttcccat--tttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatt 214  Q
    |||||||||||| |||||||||||| ||| |||| | ||  |||||||||  ||| | ||||  |||||| ||||||||||| |||||||||||| | ||    
T  29676183 gagcatatttccctaaacataggggatcacttttgctattctttttaatatggggcctaaattgcaacattttgaaacttagagggcgaaaagtgaagtt 29676084  T
Q  215 tagcct 220  Q
    ||||||    
T  29676083 tagcct 29676078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 51719245 - 51719401
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| || |||||||||||||  ||||||||||| | |||||||||||||||||| |||||||| |    
T  51719245 aaaaggggtcataatcgcaactttttgtaaagataaggggt-aaaaaacatattttccttatgttaggggatcaaaagagcatatttccctaaacataag 51719343  T
Q  140 gggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttag 196  Q
    |||||| |||| ||| ||||||||||  | | ||||||| |||||| |||||||||||    
T  51719344 gggtcacttttgccatttttttaatagggagccaaaatcgcaacattttgaaacttag 51719401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 2657627 - 2657816
Alignment:
Q  32 tgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttcctt 130  Q
    |||| ||||||| ||||||||||| |||||||||  ||||| |||| ||||||| | |||||||| ||||||||||| |||||| ||||||||||||| |    
T  2657627 tgtcctaaaaaaagggtcataatcacaacttttttaaaagataaggggtcaaaagagcatatttc-cttatgttaggcggtcaatagagcatatttccct 2657725  T
Q  131 aaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||||||| |||| |||| |||  ||||||||| | ||||||||||| ||| || ||||||||||| |||||||||||| | ||||||||    
T  2657726 aaacatagggagtcacttttgccattttttttaat-aggggtcaaaatcgcaatattttgaaacttagggggcgaaaagtgtagtttagcct 2657816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 16551728 - 16551885
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctctta 100  Q
    |||||| |||| ||||||||||||| ||| ||||  |||| | ||| ||||||||||||||||||  |||| |||| ||||||| | ||||||| ||| |    
T  16551728 tcgtcccaaaattgctgagaagacgccacgtgtcccaaaacaagggccataatcgcaactttttgagaagataaggggtcaaaagatcatatttgtctga 16551827  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttt 158  Q
    ||||||| |||||||||||||||||||| ||||||| |||||||| |||| |||||||    
T  16551828 tgttagggggtcaaaagagcatatttccctaaacattgggggtcacttttgccatttt 16551885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 219
Target Start/End: Complemental strand, 2425405 - 2425225
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatag 138  Q
    |||| |||||||||||||||||||||| ||||| ||||  | |||||| |||||||| ||||||||||  ||||||||||||||| |||| ||||||||     
T  2425405 aaaatgggtcataatcgcaactttttgtaaagataagggttaaaaaaaacatatttcccttatgttagagggtcaaaagagcata-ttccctaaacata- 2425308  T
Q  139 ggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    ||||||| |||| |||  ||||||||||  ||||||||||| |||||| |||||||||||  ||| ||||||| | |||||||    
T  2425307 ggggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttgaaacttaggtggcaaaaagtggagtttagcc 2425225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 47685313 - 47685186
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| |||| |||||||| ||| |||| |||||||| |||||| |||||||||||||| ||||  |||| ||||||||||||||||  |||||||||||     
T  47685313 aaaattgctaagaagacgccacgtgtcctaaaaaagaggtcattatcgcaactttttgtaaaggtaaggggtcaaaaaacatattttccttatgttaggg 47685214  T
Q  109 ggtcaaaagagcatatttccttaaacat 136  Q
    | |||||| |||||||||||||||||||    
T  47685213 gatcaaaatagcatatttccttaaacat 47685186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 27092944 - 27093070
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| |||   |||||||||| |||||| ||||||||||| ||||| |||| ||||||||||||||||| | ||| |||||     
T  27092944 aaaattgctgagaagacgccacgtgttccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaaacatatttcacatatattaggg 27093043  T
Q  109 ggtcaaaagagcatatttccttaaaca 135  Q
    |||||||||||||||||||| ||||||    
T  27093044 ggtcaaaagagcatatttccctaaaca 27093070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 45 - 220
Target Start/End: Original strand, 18606811 - 18606988
Alignment:
Q  45 gggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggt 143  Q
    |||| |||||| ||||||||||  |||| |||| ||||||| | | |||||  ||||||||| | |||||||||||||||||||| |||||||  |||||    
T  18606811 gggtgataatcacaactttttgagaagataaggggtcaaaagatcgtattttccttatgttatggggtcaaaagagcatatttccctaaacatgaggggt 18606910  T
Q  144 catttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    || |||| ||| ||||||||||  |||||||||||||||||| || |||||||| || ||||||||| | ||||||||    
T  18606911 cactttttccagttttttaatagggggtcaaaatcacaacattttaaaacttaggggtcgaaaagtgtagtttagcct 18606988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 29182092 - 29182243
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttagg 107  Q
    |||| |||||||||||||  || ||||| |||||| ||| ||||||||||||||| ||  |||| |||| ||||||| | |||||||| |||||||||||    
T  29182092 aaaattgctgagaagacgcaacgtgtctcaaaaaatgggccataatcgcaactttatgagaagataaggggtcaaaagatcatatttcccttatgttagg 29182191  T
Q  108 aggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
     |||||||||||||||||||  |||||||| ||||||| ||||  ||||||||    
T  29182192 -ggtcaaaagagcatatttctctaaacataaggggtcacttttgtcatttttt 29182243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 4455127 - 4455276
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctctta 100  Q
    |||||| |||| ||||||||||| | ||||||||  ||||||  || ||||||||||||||||||  |||| |||  ||||||||| |||||||| ||||    
T  4455127 tcgtcccaaaattgctgagaagatgccacatgtcccaaaaaaatggccataatcgcaactttttgagaagataagtggtcaaaaaatcatatttccctta 4455226  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcattttt 150  Q
    ||||| | |||||||||||||||||| | ||||||| |||| ||| ||||    
T  4455227 tgttacggggtcaaaagagcatattttcctaaacattggggatcactttt 4455276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 9387893 - 9387694
Alignment:
Q  22 agacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaac-atatttctcttatgttaggagg-tcaaaagag 119  Q
    ||||| ||||||||  |||| ||| ||||||||||||| ||||||  |||| || | ||||||| |  ||||||| ||||||||||| || |||||||||    
T  9387893 agacgccacatgtcccaaaacaggtgtcataatcgcaaatttttgagaagataaagggtcaaaagattatatttcccttatgttaggggggtcaaaagag 9387794  T
Q  120 catatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    ||||||||||||||||| |||||| | |||| ||||||||| |  | |||  ||||||  || || |||||||||||  ||| ||||||||| |||||||    
T  9387793 catatttccttaaacat-gggggttacttttgccatttttttaataggggcgaaaatcgtaatattttgaaacttagaaggcaaaaagtgcagtttagcc 9387695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 21148111 - 21148039
Alignment:
Q  88 catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    |||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||| ||||  ||||||||    
T  21148111 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgtcatttttt 21148039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 22786194 - 22786031
Alignment:
Q  57 caactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca- 154  Q
    ||||||||||  |||| |||| ||||||| | |||||||| |||||||||| | ||||||||||||||||||| ||||||| |||| ||| |||| |||     
T  22786194 caactttttgagaagataaggggtcaaaagatcatatttcacttatgttag-atgtcaaaagagcatatttccctaaacatgggggctcacttttgccat 22786096  T
Q  155 -ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
     ||||||||| | ||||||||||| |||||| || ||||||||  ||| ||| ||||| |||||||    
T  22786095 tttttttaat-aggggtcaaaatcgcaacattttaaaacttaggaggcaaaaggtgcagtttagcc 22786031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 31084723 - 31084852
Alignment:
Q  28 cacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttc 127  Q
    ||||||||  ||||| ||||||||||||| ||||||||| ||||| |||| |||||||| |||||||  | ||||||||| |||||||| |  |||||||    
T  31084723 cacatgtcccaaaaagggggtcataatcgaaactttttgtaaagataaggggtcaaaaagcatattttccatatgttagggggtcaaaatattatatttc 31084822  T
Q  128 cttaaacatagggggtcatttttcccatttt 158  Q
    | |||| ||| ||||||| |||| |||||||    
T  31084823 cataaaaata-ggggtcacttttaccatttt 31084852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 218
Target Start/End: Original strand, 2260463 - 2260677
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    |||| |||||| | ||||||||||| ||| | ||  ||||||||||||| |||||||||||||||  |||| |||| || |||| | |||||||| ||||    
T  2260463 tcgttctaaaattactgagaagacgccacgtatcccaaaaaaggggtcagaatcgcaactttttgagaagataaggggttaaaatatcatatttccctta 2260562  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtggg 200  Q
    | ||| | |||||||| ||||||||||  |||||||  ||||||| ||||  |||||||| || | || |||||||| |||| | || |||||||  ||     
T  2260563 tattatggggtcaaaaaagcatatttcactaaacat--ggggtcacttttgtcattttttcat-agggatcaaaatcgcaactttttaaaacttaaggga 2260659  T
Q  201 cgaaaagtgcaatttagc 218  Q
     |||||||||| ||||||    
T  2260660 tgaaaagtgcactttagc 2260677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 160
Target Start/End: Complemental strand, 10684965 - 10684854
Alignment:
Q  50 ataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgtta-ggaggtcaaaagagcatatttccttaaacatagggggtcatt 147  Q
    |||||||||||||||||  |||| |||| ||||||| | ||||||| |||||||||| || |||||| |||| |||||||| |||||| | ||||||| |    
T  10684965 ataatcgcaactttttgagaagataaggggtcaaaagatcatatttttcttatgttaggggggtcaatagagtatatttccctaaaca-atggggtcact 10684867  T
Q  148 tttcccatttttt 160  Q
    ||| |||||||||    
T  10684866 tttgccatttttt 10684854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 26605408 - 26605494
Alignment:
Q  48 tcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    ||||||||| ||||||||| ||| | |||   ||||||||||||||| |||||||||||| |||||||| ||||||||||| |||||||    
T  26605408 tcataatcgtaactttttgtaaaaataagatatcaaaaaacatattt-tcttatgttagg-ggtcaaaatagcatatttccctaaacat 26605494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 136
Target Start/End: Complemental strand, 16972034 - 16971935
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    |||| |||||||||||||||||  |||||  |||| || |||||||||   |||||||| ||||||||||| |||| ||||||||||| ||| |||||||    
T  16972034 aaaataggggtcataatcgcaatattttgagaagataaagagtcaaaaggtcatatttcccttatgttagggggtctaaagagcatatatccctaaacat 16971935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 21185386 - 21185268
Alignment:
Q  39 aaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacata 137  Q
    ||||| ||||||||||||||||||||||  |||| | || ||||||| | ||||||| |||||||||| | |||||||||| ||||||||| |||||||     
T  21185386 aaaaaagggtcataatcgcaactttttgagaagatagggggtcaaaagatcatattt-tcttatgttaag-ggtcaaaagaacatatttccctaaacat- 21185290  T
Q  138 gggggtcatttttcccatttttt 160  Q
     ||||||| ||||  ||||||||    
T  21185289 -ggggtcacttttatcatttttt 21185268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 4059586 - 4059520
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    ||||||||||  ||| ||||||| |||||| ||||||| ||| |||||||||||||| |||||||||    
T  4059586 ttttttaatagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctt 4059520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 28552353 - 28552307
Alignment:
Q  171 caaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttag 217  Q
    ||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  28552353 caaaatcgcaacattttgaaacttagggggcgaaaagtgcactttag 28552307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 16858536 - 16858487
Alignment:
Q  16 ctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaacttttt 65  Q
    |||||||| || ||||||||  |||||||||| |||||||||||||||||    
T  16858536 ctgagaagccgccacatgtcccaaaaaaggggccataatcgcaacttttt 16858487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 16972090 - 16972155
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||  |||  |||||| |||||| || |||||||| |||||||||||||| ||||||||    
T  16972090 ttttttaatagggggctaaaatcgcaacattttaaaacttagggggcgaaaagtgcagtttagcct 16972155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 46432280 - 46432215
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||  ||| ||||||| ||||||  |||||| ||| |||||||||||||| ||||||||    
T  46432280 ttttttaatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcct 46432215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 16551708 - 16551652
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgca 211  Q
    ||||||||||  ||| ||||||  |||||| ||||||||||| ||||||||||||||    
T  16551708 ttttttaatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgca 16551652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 6e-58; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 48907384 - 48907597
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||  ||||| |||| |||||||| |||||||| ||||||||||||    
T  48907384 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttttaaagataaggggtcaaaaagcatatttcccttatgttagga 48907483  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||  ||| ||||||| |||||| ||||||||||| ||||||||||    
T  48907484 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaag 48907583  T
Q  208 tgcaatttagcctt 221  Q
    || | |||||||||    
T  48907584 tgaagtttagcctt 48907597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 26628117 - 26628330
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  26628117 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 26628216  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||| |||||||||    
T  26628217 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaa 26628316  T
Q  207 gtgcaatttagcct 220  Q
     || | ||||||||    
T  26628317 atgaagtttagcct 26628330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 8542822 - 8542608
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||| ||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  8542822 aaaattgctgagaagacgccacgtgtcacaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 8542723  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||||||||||  |||||| ||||||||||| || ||||||    
T  8542722 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaattgcaacattttgaaacttagaggacgaaaa 8542623  T
Q  207 gtgcaatttagcctt 221  Q
    ||| | |||||||||    
T  8542622 gtgaagtttagcctt 8542608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 3328905 - 3329117
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||  |||||||| ||||||||||||    
T  3328905 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaggcatatttcccttatgttagga 3329004  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| ||||| |||||||||| |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||| |||||||||    
T  3329005 ggtcaaaagagcatatttccctaaacttagggggtcactttttccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaa 3329104  T
Q  207 gtgcaatttagcc 219  Q
    ||| | |||||||    
T  3329105 gtgaagtttagcc 3329117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 30155237 - 30155434
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||| ||||||| ||  ||||  |||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||    
T  30155237 aaaattgctgcgaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagga 30155336  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||| ||| |||| |||||||||||||  || |||||||| |||||| || |||||||| |||||||||    
T  30155337 ggtcaaaagagcatatttccctaaacataggggatcacttttgccattttttaataggggatcaaaatcgcaacattttaaaacttagagggcgaaaa 30155434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 40 - 219
Target Start/End: Complemental strand, 48860883 - 48860704
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||| |    
T  48860883 aaaagggatcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagaaggtcaaaatagcatatttccctaaacataag 48860784  T
Q  140 gggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    |||||||||||  ||||||||||||| |||||||||| ||||||| || |||||||| ||||| |||||| | |||||||    
T  48860783 gggtcatttttatcattttttaataaggggtcaaaattacaacattttaaaacttagggggcgcaaagtggagtttagcc 48860704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 13081106 - 13080894
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||  ||||||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||| ||    
T  13081106 aaaattgctgagaagactccacatgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatga 13081007  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||| ||||||||||| |||| |||  ||||||||||  | | ||||||| |||||| ||||||||||| |||||||||    
T  13081006 ggtcaaaagagcatatttccctaaatatagggggtcacttttgccattttttttaatagggagccaaaatcgcaacattttgaaacttagagggcgaaaa 13080907  T
Q  207 gtgcaatttagcc 219  Q
    ||| | |||||||    
T  13080906 gtgaagtttagcc 13080894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 38 - 220
Target Start/End: Complemental strand, 25179761 - 25179577
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacata 137  Q
    |||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  25179761 aaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttctcttacgttaggaggtcaaaagagcatatttccctaaacata 25179662  T
Q  138 gggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||||| |||| | |  ||||||||||  ||| ||||||| |||||| || |||||||| |||||||||||| | ||||||||    
T  25179661 gggggtcacttttgctattttttttaatagggggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcct 25179577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 39 - 220
Target Start/End: Original strand, 27852873 - 27853056
Alignment:
Q  39 aaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatag 138  Q
    ||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  27852873 aaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatag 27852972  T
Q  139 ggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||| |||| |||  ||||||||||  ||| ||||||  |||||| ||||||||||| |||||||||||| | ||||||||    
T  27852973 ggggtcacttttgccattttttttaatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcct 27853056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 8339032 - 8339244
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  ||||||| || |||||||||||||||||| ||||| |||| |||||||| ||||||||| |||||||||||    
T  8339032 aaaattgctgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttctattatgttagga 8339131  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||| ||||||||||| |||||||| ||||||| |||| |||  ||||||||||  ||| ||||||  |||||| ||||||||||| |||||||||    
T  8339132 ggtcaaaaaagcatatttccctaaacataaggggtcacttttgccattttttttaatagggggccaaaattgcaacattttgaaacttagagggcgaaaa 8339231  T
Q  207 gtgcaatttagcc 219  Q
    ||| | |||||||    
T  8339232 gtgaagtttagcc 8339244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 40 - 209
Target Start/End: Original strand, 25022786 - 25022954
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||| || ||||||||| | |||||||||||||||||||| ||||||||||    
T  25022786 aaaaggggtcataatcgcaactttttgtaaagataagggttcaaaaaacatatatcccttatgttatggggtcaaaagagcatatttccctaaacatagg 25022885  T
Q  140 gggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtg 209  Q
    |||||| |||| ||| |||||||||| ||| |||||||  ||||| ||||||||||||||||||||||||    
T  25022886 gggtcacttttgcca-tttttaataaagggccaaaatcgtaacattttgaaacttagtgggcgaaaagtg 25022954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 40 - 206
Target Start/End: Original strand, 23428742 - 23428910
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  23428742 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagg 23428841  T
Q  140 gggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||| |||| |||  ||||||||||  ||| ||||||   ||||| ||||||||||| |||||||||    
T  23428842 gggtcacttttgccattttttttaatagggggccaaaattgtaacattttgaaacttagggggcgaaaa 23428910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 38 - 220
Target Start/End: Original strand, 26633480 - 26633660
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacata 137  Q
    |||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||     
T  26633480 aaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttctcttatgttagg-ggtcaaaagagcatatttccctaaagat- 26633577  T
Q  138 gggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
     |||||||||||| ||| ||||||||||  ||||||||||| |||||| | ||||||||| ||| |||||||||  ||||||||    
T  26633578 -ggggtcatttttgccatttttttaatagggggtcaaaatcgcaacatttagaaacttagggggtgaaaagtgccgtttagcct 26633660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 5 - 209
Target Start/End: Complemental strand, 4522170 - 4521964
Alignment:
Q  5 tcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgtt 104  Q
    |||||||| ||||||||||||| ||| ||||  ||||||||||  ||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||    
T  4522170 tcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggcaataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgtt 4522071  T
Q  105 aggaggtcaaaagagcatatttccttaaacatagggggtcatttttcc--cattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcg 202  Q
    | |||||||||||||||||||||| |||||||| ||||||| |||| |  | ||||||||||  ||| ||||||| |||||| || |||||||  |||||    
T  4522070 aagaggtcaaaagagcatatttccctaaacatatggggtcacttttgctactttttttaatagggggccaaaatcgcaacattttaaaacttatagggcg 4521971  T
Q  203 aaaagtg 209  Q
    |||||||    
T  4521970 aaaagtg 4521964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 40 - 195
Target Start/End: Original strand, 28173852 - 28174009
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||     
T  28173852 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacataga 28173951  T
Q  140 gggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaactta 195  Q
    || |||||||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||    
T  28173952 ggatcatttttgccattttttttaatagggggccaaaatcgcaacattttgaaactta 28174009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 3781094 - 3780881
Alignment:
Q  5 tcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgtt 104  Q
    |||||||| ||||||||||||  ||| ||||  ||||||||||||||| ||||||||||||| ||||| || | |||||||| |||||||| ||||||||    
T  3781094 tcctaaaattgctgagaagacaccacgtgtcccaaaaaaggggtcatattcgcaactttttgtaaagataaagggtcaaaaagcatatttcccttatgtt 3780995  T
Q  105 aggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaa 204  Q
    ||| |||||||||||||||||||| |||||||  ||||||| |||| ||||||||| |  | ||||||||||| |||||| ||||||||||| | || ||    
T  3780994 agg-ggtcaaaagagcatatttccctaaacat--ggggtcacttttgccatttttttaataggggtcaaaatcgcaacattttgaaacttagggagcaaa 3780898  T
Q  205 aagtgcaatttagcctt 221  Q
    || |||| |||||||||    
T  3780897 aaatgcattttagcctt 3780881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 40 - 221
Target Start/End: Complemental strand, 10743588 - 10743407
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||    
T  10743588 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagg-ggttaaaagagcatatttccctaaacatagg 10743490  T
Q  140 gggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    | |||| ||||  || ||||||||||  ||| ||||||| |||||| || |||||||| |||||||||| | | |||||||||    
T  10743489 gagtcacttttgtcatttttttaatagggggccaaaatcgcaacattttaaaacttagggggcgaaaagaggagtttagcctt 10743407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 22447839 - 22448045
Alignment:
Q  16 ctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagaca----aggagtcaaaaaacatatttctcttatgttaggaggt 111  Q
    ||||||||||| ||| | ||  |||||||||| |||||||||||||||||| ||||| |    ||| |||||||| |||||||| |||||||||||||||    
T  22447839 ctgagaagacgccacgtatccaaaaaaaggggccataatcgcaactttttgtaaagatatataaggggtcaaaaagcatatttcccttatgttaggaggt 22447938  T
Q  112 caaaagagcatatttccttaaacatagggggtcatttttccc--attttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtg 209  Q
    ||||||||||||||||| |||||||||| ||||| |||| ||  |||||||||||  ||| ||||||  |||||| || |||||||| ||||||||||||    
T  22447939 caaaagagcatatttccctaaacataggaggtcacttttgccatattttttaatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtg 22448038  T
Q  210 caattta 216  Q
    || ||||    
T  22448039 cagttta 22448045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 22500694 - 22500898
Alignment:
Q  16 ctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaa 115  Q
    ||||||||||| ||| ||||  |||||||||  |||||||||||||||||| ||| | ||||  ||||||| |||||||| |||||||||||||||||||    
T  22500694 ctgagaagacgccacgtgtccaaaaaaagggaccataatcgcaactttttgtaaatataagggatcaaaaagcatatttcccttatgttaggaggtcaaa 22500793  T
Q  116 agagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatt 214  Q
    ||||||||||| | |||||||||||||||| |||| ||| ||||||||||  ||||||||||  |||||| || ||| |||  ||| |||||||| | ||    
T  22500794 agagcatattttcctaaacatagggggtcacttttgccatttttttaatagggggtcaaaattgcaacattttaaaatttaaagggtgaaaagtgaagtt 22500893  T
Q  215 tagcc 219  Q
    |||||    
T  22500894 tagcc 22500898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 46673139 - 46673350
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttgg-aaagacaaggagtcaaaaaacatatttctcttatgttagg 107  Q
    |||| |||| |||||| | ||| |||| || |||||||||||||||||||||||||| | ||||| |||| ||||||| ||||||||| |||||||||||    
T  46673139 aaaattgctcagaagatgccacgtgtcctagaaaaggggtcataatcgcaacttttttgtaaagataaggggtcaaaa-acatatttcccttatgttagg 46673237  T
Q  108 aggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
      ||||||||||||||||||| |||||||||||| ||| |||| ||| ||||||||||  ||||||||||| |||||| |  |||||||  |||||||||    
T  46673238 gagtcaaaagagcatatttccctaaacataggggatcacttttgccatttttttaatagggggtcaaaatcgcaacatttgaaaacttaaggggcgaaaa 46673337  T
Q  207 gtgcaatttagcc 219  Q
    ||| | |||||||    
T  46673338 gtggactttagcc 46673350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 40836270 - 40836483
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttg-gaaagacaaggagtcaaaaaacatatttctcttatgttagg 107  Q
    |||| |||||||||| || ||| ||||  |||||||||| |||||||||||||||||  || | | |||| ||||||||||||||||| ||||| |||||    
T  40836270 aaaattgctgagaagccgccacgtgtcccaaaaaaggggccataatcgcaactttttttgagatataaggggtcaaaaaacatatttcccttatattagg 40836369  T
Q  108 aggtcaaaagagcatatttccttaaacatagggggtcatttttccca---ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaa 204  Q
     |||||||||| ||||||||| |||||||  ||||||| |||| |||   ||||||||||  ||||||||||| |||||| || |||||||| |||||||    
T  40836370 gggtcaaaagaacatatttccctaaacat--ggggtcacttttgccatttttttttaatagggggtcaaaatcgcaacattttaaaacttagggggcgaa 40836467  T
Q  205 aagtgcaatttagcct 220  Q
    || |||| ||||||||    
T  40836468 aaatgcagtttagcct 40836483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 28154974 - 28155107
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||| ||| |||||||||||||||||| ||||| |||  |||||||| |||||||| ||||||||||||    
T  28154974 aaaattgctgagaagacgccacgtgtcccaaaaaaagggccataatcgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgttagga 28155073  T
Q  109 ggtcaaaagagcatatttccttaaacataggggg 142  Q
    |||||||||||||||||||| |||||||| ||||    
T  28155074 ggtcaaaagagcatatttccctaaacatatgggg 28155107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 33279672 - 33279877
Alignment:
Q  4 gtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatg 102  Q
    |||| |||| ||||||||||||| ||| ||||| |||||| |||||||||||| ||||||| | ||| | ||||  |||||| | |||||||| ||||||    
T  33279672 gtccaaaaattgctgagaagacgccacgtgtctcaaaaaaagggtcataatcgtaactttt-gtaaatataagggatcaaaagagcatatttcccttatg 33279770  T
Q  103 ttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtggg 200  Q
    ||||| |||||||||||||||||| | |||||| || ||| || |||| |||  ||||||||||  ||||||||||| |||||| || |||||||| |||    
T  33279771 ttagggggtcaaaagagcatattttcctaaaca-agagggccacttttgccattttttttaatagggggtcaaaatcgcaacattttaaaacttaggggg 33279869  T
Q  201 cgaaaagt 208  Q
    ||||||||    
T  33279870 cgaaaagt 33279877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 20001842 - 20001709
Alignment:
Q  88 catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtca-tttttcccattttttaataacgggtcaaaatcacaacatgt 186  Q
    |||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||| |||| | | ||||||||| | ||||||||||| |||||| |    
T  20001842 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcactttttttaat-aggggtcaaaatcgcaacattt 20001744  T
Q  187 tgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    |||||||||| |||  ||||||||| |||| ||||    
T  20001743 tgaaacttagggggttaaaagtgcagtttatcctt 20001709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 34878621 - 34878754
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||| | |||||| | ||||||||| ||||| ||||  ||||||| |||||||| ||||| |||||     
T  34878621 aaaattgctgagaagacgccacgtgtcccaaaaaaggtgccataattgaaactttttgtaaagataagggatcaaaaagcatatttcccttatattaggg 34878720  T
Q  109 ggtcaaaagagcatatttccttaaacataggggg 142  Q
    |||||||||||||||||||| ||||| |||||||    
T  34878721 ggtcaaaagagcatatttccctaaacttaggggg 34878754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 22416553 - 22416393
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    |||||| |||| || |||||||||| ||| ||||  ||| ||||||||||||| ||||||||||| ||||| || | ||||||| | |||||||  ||||    
T  22416553 tcgtcccaaaattgttgagaagacgccacgtgtcccaaataaggggtcataattgcaactttttgtaaagataatgggtcaaaagagcatatttacctta 22416454  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaaca-tagggggtcatttttcccatttttt 160  Q
    |||||| ||||||||||||||||| ||| |||||| | |||||||| |||| |||||||||    
T  22416453 tgttagaaggtcaaaagagcatatatccctaaacattggggggtcacttttgccatttttt 22416393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 26126998 - 26127125
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| |||| |||  ||||||| || |||||||||||||||||| ||||| |||| | |||||| |||||||| | ||||||||      
T  26126998 aaaattgctgagaagacgccacaagtccaaaaaaagaggccataatcgcaactttttgtaaagataaggggccaaaaagcatatttcccctatgttagag 26127097  T
Q  109 ggtcaaaagagcatatttccttaaacat 136  Q
    |||||||| | ||||||||| |||||||    
T  26127098 ggtcaaaataacatatttccctaaacat 26127125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 26177041 - 26177167
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttat 101  Q
    |||||| |||| ||||||||||| | |||| |||  ||||||| || |||||||||||||||||| ||||| || ||| |||||| |||||||| | |||    
T  26177041 tcgtcccaaaattgctgagaagaagccacaagtcccaaaaaagaggccataatcgcaactttttgtaaagataatgagccaaaaagcatatttcccctat 26177140  T
Q  102 gttaggaggtcaaaagagcatatttcc 128  Q
    |||||  |||||||| |||||||||||    
T  26177141 gttagagggtcaaaatagcatatttcc 26177167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 33105145 - 33105002
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttaggaggtcaaa 115  Q
    |||||||||| ||| ||||  |||| | |||  ||||||| |||||||||| |||| ||||  |||||| ||||||||||||||||| ||| || |||||    
T  33105145 tgagaagacgccacgtgtcccaaaacatgggaaataatcgaaactttttgggaagaaaagggatcaaaataacatatttctcttatgatag-agatcaaa 33105047  T
Q  116 agagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    ||||||||||||| ||||||| |||||||| |||  |||||||||    
T  33105046 agagcatatttccctaaacatggggggtcactttagccatttttt 33105002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 6927682 - 6927596
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttc 95  Q
    |||| |||| |||||| | ||| ||||  ||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  6927682 aaaattgctcagaagatgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttc 6927596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 3821025 - 3820915
Alignment:
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagt 208  Q
    |||||||||||||||||||| |||||||  ||||||| |||| ||||||||| |  | ||||||||||| |||||| || |||||||| | || ||||||    
T  3821025 ggtcaaaagagcatatttccctaaacat--ggggtcacttttgccatttttttaataggggtcaaaatcgcaacattttaaaacttagggagcaaaaagt 3820928  T
Q  209 gcaatttagcctt 221  Q
    ||| |||||||||    
T  3820927 gcattttagcctt 3820915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 3821098 - 3821018
Alignment:
Q  5 tcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa 85  Q
    |||||||| ||||||||||||  ||||||||  ||||||||||||||||||||||||||||| ||||| || | |||||||    
T  3821098 tcctaaaattgctgagaagacaccacatgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaagggtcaaaa 3821018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 23320579 - 23320446
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctctta 100  Q
    |||||| |||| |||||| |||||| ||||||||  ||||| |||| |||||| |||||||||||  |||| ||| |||||| | | || | ||||||||    
T  23320579 tcgtcccaaaattgctgaaaagacgccacatgtcccaaaaa-ggggccataatagcaactttttgagaagataagaagtcaatatatcagacttctctta 23320481  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    ||||||| |||||||||||||||||||| |||||||    
T  23320480 tgttagg-ggtcaaaagagcatatttccctaaacat 23320446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 35201095 - 35201237
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaa 115  Q
    |||||||| | |||||||| ||||| ||| | ||| |||| |||||||||  |||| |||| ||||||| | ||||||||  ||||||||||  ||||||    
T  35201095 tgagaagatgccacatgtcctaaaacaggagccatgatcgtaactttttgagaagataaggggtcaaaatatcatatttcctttatgttagg--gtcaaa 35201192  T
Q  116 agagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    ||||||| |||||  ||||||  |||||||||||| |||||||||    
T  35201193 agagcatgtttcccaaaacatgtggggtcatttttgccatttttt 35201237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 1743461 - 1743253
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttagg 107  Q
    |||| ||||||||||||| ||||||||  |||| |  || | | ||||||||||||||  |||| |||| ||||||| | || ||||| |||||||||||    
T  1743461 aaaattgctgagaagacgccacatgtcccaaaacaatggcccttatcgcaactttttgagaagataaggggtcaaaagatcacatttc-cttatgttagg 1743363  T
Q  108 aggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
     ||||||||||| |||||| | |||||||  |||    |||| ||  ||||||||||  |||  ||||||  ||||| ||||||||||| | ||||||||    
T  1743362 gggtcaaaagagtatattttcctaaacatcaggg----ttttgccatttttttaatagggggctaaaatcgaaacattttgaaacttagggtgcgaaaag 1743267  T
Q  208 tgcaatttagcctt 221  Q
    |||| |||||||||    
T  1743266 tgcagtttagcctt 1743253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 9496313 - 9496458
Alignment:
Q  14 tgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttgg-aaagacaaggagtcaaaaaacatatttctcttatgttaggaggtc 112  Q
    |||||||| |||| |||||| |  |||| | |||||||  |||||||||||| | ||||| |||| | |||||| ||||||||  |||||||||  ||||    
T  9496313 tgctgagaggacgccacatgccccaaaacaagggtcatcctcgcaacttttttgtaaagataaggggacaaaaagcatatttcctttatgttagagggtc 9496412  T
Q  113 aaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    |||||||||||||||| |||||||  | ||||| |||| |||||||||    
T  9496413 aaaagagcatatttccctaaacat--gtggtcacttttgccatttttt 9496458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 46387745 - 46387820
Alignment:
Q  88 catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaata 164  Q
    |||||||| ||||||||||| | |||||||||||| ||||||||||||| |||||||| |||| || ||||||||||    
T  46387745 catatttcccttatgttaggggatcaaaagagcatgtttccttaaacat-gggggtcacttttgcctttttttaata 46387820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 219
Target Start/End: Complemental strand, 25336488 - 25336358
Alignment:
Q  88 catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgt 186  Q
    |||||||| ||||||||||| ||||||||||||||| |||| |||| |||  || ||| ||||  || |||||||||||  || ||||||  |||||| |    
T  25336488 catatttcccttatgttagggggtcaaaagagcataattccctaaatata--ggttcacttttgtcatttttttaataagaggccaaaattgcaacattt 25336391  T
Q  187 tgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    ||||| |||  |||||||||||||| |||||||    
T  25336390 tgaaatttaaggggcgaaaagtgcagtttagcc 25336358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 31039062 - 31039202
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtca-aaaaacatatttctctta 100  Q
    |||||| |||| ||||||||||||| |||||||  |||||||||||  ||||||||||||||||   |||| || | ||||  | | |||||||| | ||    
T  31039062 tcgtccaaaaattgctgagaagacgccacatgttctaaaaaaggggctataatcgcaactttttaagaagataaagggtcattagatcatatttcccata 31039161  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacataggggg 142  Q
    ||||||| |||||||||||||| ||| | | |||||||||||    
T  31039162 tgttagg-ggtcaaaagagcatgttttccttaacataggggg 31039202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 43668640 - 43668583
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttg 66  Q
    |||| ||||||||||||| ||||||||  |||| ||||||||||||||||||||||||    
T  43668640 aaaattgctgagaagacgccacatgtcccaaaacaggggtcataatcgcaactttttg 43668583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 8339004 - 8338940
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    ||||||||||  ||||||||||| |||||| ||||||| ||| |||||||||||||| |||||||    
T  8339004 ttttttaatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 8338940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 220
Target Start/End: Complemental strand, 36311283 - 36311151
Alignment:
Q  88 catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataac--gggtcaaaatcacaacatg 185  Q
    |||||||| ||||||||| | ||||||||||| |||||| | |||| ||  ||||||| |||| |||||||||  |||   ||| ||||||| ||||||     
T  36311283 catatttcccttatgttatggggtcaaaagagtatattttcctaaatat--ggggtcacttttgccatttttttttaataggggccaaaatcgcaacatt 36311186  T
Q  186 ttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    || |||||||| || ||||||||||| ||||||||    
T  36311185 ttaaaacttaggggacgaaaagtgcagtttagcct 36311151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 26633424 - 26633358
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagccttg 222  Q
    ||||||||||  ||||||||||| |||||| || |||||||| |||||||||||||| ||||||||||    
T  26633424 ttttttaatagggggtcaaaatcgcaacattttaaaacttag-gggcgaaaagtgcagtttagccttg 26633358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 209
Target Start/End: Complemental strand, 4775983 - 4775860
Alignment:
Q  88 catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca---ttttttaataacgggtcaaaatcacaacat 184  Q
    |||||||| | ||||| ||| |||||||| ||||||||||| ||||||| |||||||| |||| |||   |||||| |||  ||| ||||||  ||||||    
T  4775983 catatttcccgtatgtgagggggtcaaaatagcatatttccctaaacat-gggggtcacttttgccaatttttttttatagggggccaaaattgcaacat 4775885  T
Q  185 gttgaaacttagtgggcgaaaagtg 209  Q
     ||||||||||| ||| ||||||||    
T  4775884 tttgaaacttagagggtgaaaagtg 4775860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 18388869 - 18388942
Alignment:
Q  86 aacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    ||||||||| ||||||| |||| |||||||||||||||||||| | ||||| |||||||| ||||  ||||||||    
T  18388869 aacatatttatcttatggtagggggtcaaaagagcatatttcccttaacat-gggggtcacttttgtcatttttt 18388942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 25179815 - 25179880
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||| ||| ||| ||| |||||| ||||||| ||| |||||||||||||| ||||||||    
T  25179815 ttttttaataaggggccaatatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 25179880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 32960803 - 32960911
Alignment:
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||| ||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||  ||||||| |||||| |||||||||    ||||||||    
T  32960803 ggtcaaaa-agcatatttccctaaacatagggggtcacttttgccattttttttaataggggaccaaaatcgcaacattttgaaactt----ggcgaaaa 32960897  T
Q  207 gtgcaatttagcct 220  Q
    ||| | ||||||||    
T  32960898 gtgaagtttagcct 32960911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 32960742 - 32960820
Alignment:
Q  16 ctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttc 95  Q
    ||||||||||| ||| ||||  |||||| ||  |||||||||||||||||| ||||| |||| |||||||| ||||||||    
T  32960742 ctgagaagacgccacgtgtcccaaaaaaaggc-cataatcgcaactttttgtaaagataaggggtcaaaaagcatatttc 32960820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 20001948 - 20002013
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    ||||||||||  ||| ||||||| |||||| ||||||||||| ||| |||||||||| |||||||||    
T  20001948 ttttttaatagggggccaaaatcgcaacattttgaaacttag-gggagaaaagtgcagtttagcctt 20002013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 22447804 - 22447739
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||  ||| ||||||  |||||| ||||||| ||| |||||||||||||| ||||||||    
T  22447804 ttttttaatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcct 22447739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 28173793 - 28173728
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||  ||| ||||||| ||||||  |||||| ||| |||||||||||||| ||||||||    
T  28173793 ttttttaatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcct 28173728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 48907345 - 48907292
Alignment:
Q  167 gggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||||||||||||||| ||||||| ||| |||  ||||||||| ||||||||    
T  48907345 gggtcaaaatcacaacattttgaaacatagggggtcaaaagtgcactttagcct 48907292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 48743227 - 48743279
Alignment:
Q  13 atgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaacttttt 65  Q
    ||||||||||| || ||||||||  ||||||||||||| |||| |||||||||    
T  48743227 atgctgagaagccgccacatgtcccaaaaaaggggtcaaaatcacaacttttt 48743279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 41877120 - 41877329
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| |||||| |||||| ||| |||| ||||||||||||||||||||||||||| |  ||||| |||| |||||||| |||||||| ||||||||||||    
T  41877120 aaaattgctgaaaagacgccacgtgtcctaaaaaaggggtcataatcgcaactttgt--aaagataaggggtcaaaaagcatatttcccttatgttagga 41877217  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagt 208  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||||||  | | ||||||| |||||| ||||||||||| |||||||||||    
T  41877218 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttaatagggagccaaaatcgcaacattttgaaacttagagggcgaaaagt 41877317  T
Q  209 gcaatttagcct 220  Q
    | | ||||||||    
T  41877318 gaagtttagcct 41877329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 43793716 - 43793935
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttat 101  Q
    |||||| |||| ||||||||||||| ||||||||  ||||||||||||||| ||||||||||||| ||| | |||| ||||||||||||||||| |||||    
T  43793716 tcgtcccaaaattgctgagaagacgccacatgtcccaaaaaaggggtcatattcgcaactttttgtaaatataaggggtcaaaaaacatatttcccttat 43793815  T
Q  102 gttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtggg 200  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||| ||| ||||||||||  ||| ||||||| |||||| |||||||||||  ||    
T  43793816 gttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgccatttttttaatagggggccaaaatcgcaacattttgaaacttaggcgg 43793915  T
Q  201 cgaaaagtgcaatttagcct 220  Q
    | ||||||| | ||||||||    
T  43793916 caaaaagtggagtttagcct 43793935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 13397767 - 13397981
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  13397767 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 13397866  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||| ||||||  ||| || ||||||||||| |||||||||    
T  13397867 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaattgcaatattttgaaacttagagggcgaaaa 13397966  T
Q  207 gtgcaatttagcctt 221  Q
    ||| | |||||||||    
T  13397967 gtgaagtttagcctt 13397981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 52838434 - 52838231
Alignment:
Q  14 tgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtca 113  Q
    ||||||||||||||||| ||||| |||||||||  |||||||||||||||||| ||||| |||| |||||||| |||||||| | |||||||||||||||    
T  52838434 tgctgagaagacgacacgtgtctcaaaaaagggaccataatcgcaactttttgtaaagataagg-gtcaaaaagcatatttcccgtatgttaggaggtca 52838336  T
Q  114 aaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaat 213  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| |  |  |||||||||| |||||| || |||||||| |||||||||||| | |    
T  52838335 aaagagcatatttcc-taaacatagggggtcatttttgccatttttttaatagaggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgaagt 52838237  T
Q  214 ttagcc 219  Q
    ||||||    
T  52838236 ttagcc 52838231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 5304439 - 5304650
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||| ||| |||||||||||||||||| ||||| |||| |||||||| |||||||  ||||||||||||    
T  5304439 aaaattgctgagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaaagcatattttccttatgttagga 5304538  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||||||||||||||||| |||||||| ||||||| |||| ||| ||||||||||  ||||||||||| |||||| ||||||||||| ||||||||||    
T  5304539 ggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatttttttaatagagggtcaaaatcgcaacattttgaaacttagagggcgaaaag 5304637  T
Q  208 tgcaatttagcct 220  Q
    || | ||||||||    
T  5304638 tgaagtttagcct 5304650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 35475505 - 35475290
Alignment:
Q  5 tcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgtt 104  Q
    |||||||| ||||||||||||| ||| ||||  |||||||||||||||||||| |||||||| ||||| |||| ||||||||||||||||| ||||||||    
T  35475505 tcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgctactttttgtaaagataaggggtcaaaaaacatatttcccttatgtt 35475406  T
Q  105 aggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcg 202  Q
    |||||||||||||||||||||||| ||||||||  |||||| |||| |||  ||||||||||  | | ||||||| |||||| || |||||||| |||||    
T  35475405 aggaggtcaaaagagcatatttccctaaacata--gggtcacttttgccattttttttaatagggagccaaaatcgcaacattttaaaacttagagggcg 35475308  T
Q  203 aaaagtgcaatttagcct 220  Q
    |||| || | ||||||||    
T  35475307 aaaaatgaagtttagcct 35475290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 15058910 - 15059061
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  ||||||||||  ||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  15058910 aaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 15059009  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  15059010 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttt 15059061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 25011947 - 25011735
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| |||| |||||| | ||| ||||  ||||||||| |||||||| |||||||||| ||||| |||| ||||||||||||||  | |||||||||||     
T  25011947 aaaattgctcagaagatgccacgtgtcccaaaaaagggatcataatcccaactttttgtaaagataaggggtcaaaaaacatatcccccttatgttaggg 25011848  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||| || ||||||    
T  25011847 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttaggggacgaaaa 25011748  T
Q  207 gtgcaatttagcc 219  Q
    ||| | |||||||    
T  25011747 gtggagtttagcc 25011735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 4357466 - 4357252
Alignment:
Q  7 ctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttag 106  Q
    |||||| ||||||||||||| ||  ||||  |||||| ||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||    
T  4357466 ctaaaattgctgagaagacgccaggtgtcccaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttag 4357367  T
Q  107 gaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt--aataacgggtcaaaatcacaacatgttgaaacttagtgggcgaa 204  Q
     ||||||||||||||||||||| |||| |||||| |||| |||| |||||||||  ||||  | |  |||||| |||||| ||||||||||| |||||||    
T  4357366 aaggtcaaaagagcatatttccctaaatatagggtgtcacttttgccattttttttaatagggagctaaaatcgcaacattttgaaacttagagggcgaa 4357267  T
Q  205 aagtgcaatttagcc 219  Q
    ||||| | |||||||    
T  4357266 aagtgaagtttagcc 4357252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 40 - 209
Target Start/End: Original strand, 9195787 - 9195956
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||| | |||||||||||||||||||| ||||||||||    
T  9195787 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttatg-ggtcaaaagagcatatttccctaaacatagg 9195885  T
Q  140 gggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtg 209  Q
    |||||| ||||  || ||||||||||  ||  ||||||| |||||| |||||| |||| ||||||||||||    
T  9195886 gggtcacttttgtcatttttttaataggggaccaaaatcgcaacattttgaaatttagggggcgaaaagtg 9195956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 6789050 - 6789264
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| |||| |||||||| ||| ||||  |||||| ||| ||||||||||| |||||| ||||| || | |||||||||||| ||||||| |||||||||    
T  6789050 aaaattgctaagaagacgccacgtgtcccaaaaaaaggggcataatcgcaattttttgtaaagataacgggtcaaaaaacatttttctctcatgttagga 6789149  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccattt--tttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||| ||| ||||||||||| |||||||||||||||| |||| ||||||  ||||| |  ||| ||||||| |||||| ||||||||||  |||||||||    
T  6789150 ggtcgaaacagcatatttccctaaacatagggggtcacttttgccattttatttaacagggggccaaaatcgcaacattttgaaacttaaagggcgaaaa 6789249  T
Q  207 gtgcaatttagcctt 221  Q
    ||| | |||||||||    
T  6789250 gtgaagtttagcctt 6789264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 208
Target Start/End: Complemental strand, 27018426 - 27018228
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||| ||||||||||| || || |||| ||||||||||||||||| ||| |||||||     
T  27018426 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaggataaggggtcaaaaaacatatttcccttttgttaggg 27018327  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagt 208  Q
    |||||||||||||||||||| ||||||||  |||||| |||| |||||||||| ||  ||||||||||| |||||| || ||| ||||  ||||||||||    
T  27018326 ggtcaaaagagcatatttccctaaacata-tgggtcacttttgccattttttattagggggtcaaaatcgcaacattttaaaatttaggaggcgaaaagt 27018228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 40 - 219
Target Start/End: Original strand, 4433306 - 4433485
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    |||||||||||||||| |||||||||| ||||| |||| ||||||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||||    
T  4433306 aaaaggggtcataatcacaactttttgtaaagataaggggtcaaaaaacatattttccttatgttagggggtcaaaagagcatatttccctaaacatagg 4433405  T
Q  140 gggtcatttttccc--attttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    |||||| |||| ||   ||||||||| | ||| ||||||| |||||| || |||||||| |||||||||||| | |||||||    
T  4433406 gggtcacttttgcctttttttttaat-aggggccaaaatcgcaacattttaaaacttag-gggcgaaaagtgaagtttagcc 4433485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 13826511 - 13826661
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  ||||||||||  ||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  13826511 aaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 13826610  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    ||||||||||||||||||||  ||||||| ||||||| |||| |||||||||    
T  13826611 ggtcaaaagagcatatttcccgaaacata-ggggtcacttttgccatttttt 13826661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 55780567 - 55780386
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||  |||| |||||| |||||||||||||||||||| ||||||||||    
T  55780567 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatattttccttaggttagg-ggtcaaaagagcatatttccctaaacatagg 55780469  T
Q  140 gggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||| |||| |||  ||||||||||  ||| ||||||| |||||| |  |||||||  ||||||||| || | ||||||||    
T  55780468 gggtcacttttgccattttttttaatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcct 55780386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 55844747 - 55844566
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||  |||| |||||| |||||||||||||||||||| ||||||||||    
T  55844747 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatattttccttaggttagg-ggtcaaaagagcatatttccctaaacatagg 55844649  T
Q  140 gggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||| |||| |||  ||||||||||  ||| ||||||| |||||| |  |||||||  ||||||||| || | ||||||||    
T  55844648 gggtcacttttgccattttttttaatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcct 55844566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 45633626 - 45633437
Alignment:
Q  32 tgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttcctt 130  Q
    |||| ||||||| ||||||||||| |||||||||  ||||| |||| ||||||| | |||||||| ||||||||||| |||||| ||||||||||||| |    
T  45633626 tgtcctaaaaaaagggtcataatcacaacttttttaaaagataaggggtcaaaagagcatatttc-cttatgttaggcggtcaatagagcatatttccct 45633528  T
Q  131 aaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||||||| |||| |||| |||  ||||||||| | ||||||||||| ||| || ||||||||||| |||||||||||| | ||||||||    
T  45633527 aaacatagggagtcacttttgccattttttttaat-aggggtcaaaatcgcaatattttgaaacttagggggcgaaaagtgtagtttagcct 45633437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 40 - 219
Target Start/End: Original strand, 19232466 - 19232648
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatag 138  Q
    ||||||||||||||||||||||||||| ||||| |||| || |||||| |||||||  |||||||||||  ||||||||||||||||||| ||||||||     
T  19232466 aaaaggggtcataatcgcaactttttgtaaagataaggggtaaaaaaaacatattttccttatgttagggagtcaaaagagcatatttccctaaacatat 19232565  T
Q  139 ggggtcatttttcccatttttt--aataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    ||| ||| |||| |||||||||  ||||   |  |||||||||||||| ||||||||||| |||| ||||||| | |||||||    
T  19232566 gggatcacttttgccattttttttaataggtgaccaaaatcacaacattttgaaacttagggggcaaaaagtggagtttagcc 19232648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 41034807 - 41034661
Alignment:
Q  50 ataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttt 149  Q
    ||||||||||||||||| ||| | |||| |||||||| |||||||| |||||||||||||||||||||| ||||||||| | | |||||||||||| |||    
T  41034807 ataatcgcaactttttgtaaaaataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagatcatatttccctgagcatagggggtcacttt 41034708  T
Q  150 tccca--ttttttaataacgggtcaaaatcacaacatgttgaaactt 194  Q
    | |||  ||||||||||| ||||||||||  |||||| |||||||||    
T  41034707 tgccattttttttaataaggggtcaaaattgcaacattttgaaactt 41034661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 160
Target Start/End: Original strand, 1588546 - 1588655
Alignment:
Q  50 ataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttt 149  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| ||||| |||    
T  1588546 ataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagg-ggtcaaaagagcatatttccctaaacataggaggtcacttt 1588644  T
Q  150 tcccatttttt 160  Q
    | |||||||||    
T  1588645 ttccatttttt 1588655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 38 - 219
Target Start/End: Complemental strand, 2931504 - 2931321
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacata 137  Q
    ||||| |||| || |||||||| |||||| ||||| |||| |||||||| ||||||||  |||||||| |||||||||||||||||||||| ||||||||    
T  2931504 aaaaacggggccacaatcgcaattttttgtaaagataaggggtcaaaaagcatatttcctttatgttatgaggtcaaaagagcatatttccctaaacata 2931405  T
Q  138 gggggtcatttttcccatttttt--aataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    |||||||| |||| |||||||||  ||||  |   ||||||  |||||| || |||||||| |||||||||||| | |||||||    
T  2931404 gggggtcacttttaccattttttttaatagagaaccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 2931321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 4098860 - 4098656
Alignment:
Q  18 gagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaa 116  Q
    ||||||||| ||| ||||  |||||||||| | |||| |||||||||||  |||| |||| ||||||| | |||||||| ||||||||||| ||||||||    
T  4098860 gagaagacgccacgtgtcccaaaaaaggggccttaattgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaa 4098761  T
Q  117 gagcatatttccttaaacatagggggtca-tttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaattt 215  Q
    ||||||||||||  ||||||||||||||| ||||  |  ||||||||||  |||||||||||||||  | || |||||||   || |||||||||| |||    
T  4098760 gagcatatttcccaaaacatagggggtcacttttgtcgtttttttaatagggggtcaaaatcacaattttttaaaacttaagaggtgaaaagtgcacttt 4098661  T
Q  216 agcct 220  Q
    |||||    
T  4098660 agcct 4098656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 15795536 - 15795412
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttat 101  Q
    |||||| |||| || |||||||||| |||||||| ||||||| ||||||||||| |||||||||| ||||| ||   |||||||| | |||||| |||||    
T  15795536 tcgtcccaaaattgatgagaagacgccacatgtcctaaaaaatgggtcataatcccaactttttgaaaagataaaaggtcaaaaagcctatttcccttat 15795437  T
Q  102 gttaggaggtcaaaagagcatattt 126  Q
    |||||||| ||||||||||||||||    
T  15795436 gttaggagttcaaaagagcatattt 15795412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 51291269 - 51291389
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaa 115  Q
    |||||||||| ||||||||  |||||||||| ||||||| ||||||||||  |||| |||| ||||||| | |||||||| ||||||||||| |||||||    
T  51291269 tgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaa 51291368  T
Q  116 agagcatatttccttaaacat 136  Q
    ||| ||||||||| |||||||    
T  51291369 agaacatatttccctaaacat 51291389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 2715817 - 2715927
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||| ||||  |||||| ||| |||||||||||||||||| ||||| |||| |||||||| |||||||| | ||||||||| ||||||||    
T  2715817 tgagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccatatgttagg-ggtcaaaa 2715915  T
Q  117 gagcatatttcc 128  Q
    || |||||||||    
T  2715916 gatcatatttcc 2715927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 25618788 - 25618902
Alignment:
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttt--ttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| ||||| |||||||||| |||| |||||||  ||||||  ||||||||||  |||||| ||||||||||| ||||| |||    
T  25618788 ggtcaaaagagcatatttccctaaacttagggggtcacttttgccatttttcttaatagggggtcaaaattgcaacattttgaaacttagagggcgcaaa 25618887  T
Q  207 gtgcaatttagcctt 221  Q
    ||| | |||||||||    
T  25618888 gtgaagtttagcctt 25618902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 24626305 - 24626521
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    |||||| |||| || | |||||||  ||||||||  |||| | ||||||||||| ||||||||||  |||| |||||||||||| | |||||||| ||||    
T  24626305 tcgtcccaaaattgttaagaagacaccacatgtcccaaaacatgggtcataatcacaactttttgagaagataaggagtcaaaagatcatatttccctta 24626404  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttt--ttaataacgggtcaaaatcacaacatgttgaaacttagtg 198  Q
    |||||    ||||||||||||||||||| |||||     |||||| |||| |||||||  ||||||  ||  ||||||  |||||| || |||||||| |    
T  24626405 tgttattgagtcaaaagagcatatttccctaaac-----gggtcacttttgccatttttgttaatagaggtccaaaattgcaacattttaaaacttaggg 24626499  T
Q  199 ggcgaaaagtgcaatttagcct 220  Q
     || ||||||||| ||||||||    
T  24626500 agcaaaaagtgcagtttagcct 24626521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 23362614 - 23362519
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaag-gagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaa 133  Q
    ||||||||||||||||||||||||||||| ||||| ||| || | ||||| |||||||  |||||||||   |||||||||| ||||||||| ||||    
T  23362614 aaaaaaggggtcataatcgcaactttttgtaaagataagagact-aaaaagcatattttccttatgttaaagggtcaaaagaacatatttccctaaa 23362519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 9397367 - 9397252
Alignment:
Q  46 ggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtc 144  Q
    |||||||||  |||||||||| ||||| || | || |||||| ||||||||  |||||||||  |||||||||||||||||||| || |||| || | ||    
T  9397367 ggtcataatgacaactttttgtaaagataaagggttaaaaaaacatatttcctttatgttagagggtcaaaagagcatatttccctatacatgggagatc 9397268  T
Q  145 atttttcccatttttt 160  Q
    | |||| |||||||||    
T  9397267 acttttgccatttttt 9397252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 24626274 - 24626220
Alignment:
Q  167 gggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    ||||||||||| |||||| || |||||||| |||||||||||||| |||||||||    
T  24626274 gggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgcagtttagcctt 24626220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 4433247 - 4433182
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||| ||| ||||||| ||||||  |||||| ||| |||||||||||||| ||||||||    
T  4433247 ttttttaataaggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagcct 4433182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 13826484 - 13826419
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||  ||||||||||| |||||| || |||| ||| |||||||||||||| ||||||||    
T  13826484 ttttttaatagggggtcaaaatcgcaacatttttaaacatagggggcgaaaagtgcactttagcct 13826419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 5304411 - 5304347
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    ||||||||||  ||| |||||||| ||||| ||||||| ||| |||||||||||||| |||||||    
T  5304411 ttttttaatagagggccaaaatcaaaacattttgaaacatagggggcgaaaagtgcactttagcc 5304347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 12101218 - 12101281
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaaga 72  Q
    |||| ||||||||||||| ||||||||| |||| ||| |||| ||| ||||||||||| |||||    
T  12101218 aaaactgctgagaagacgccacatgtctcaaaacaggagtcaaaattgcaactttttgtaaaga 12101281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 20919419 - 20919481
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttt 64  Q
    |||||| |||| ||||||||||||| ||||||||  |||| |||| |||||||| ||||||||    
T  20919419 tcgtcccaaaattgctgagaagacgtcacatgtcccaaaagagggatcataatcacaactttt 20919481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 36729153 - 36729087
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    ||||||||||  |||||||||||||||||| ||||||||||| || | |||| ||||  ||||||||    
T  36729153 ttttttaatagggggtcaaaatcacaacattttgaaacttaggggtccaaaattgcaggttagcctt 36729087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 1521597 - 1521544
Alignment:
Q  167 gggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||||||| |||| || ||||||||||| || ||||||||||| ||||||||    
T  1521597 gggtcaaaattacaatattttgaaacttaggggtcgaaaagtgcattttagcct 1521544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 4357491 - 4357552
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaattta 216  Q
    ||||||||||  ||||||||||| |||||| ||||||  ||| |||||||||||||| ||||    
T  4357491 ttttttaatagggggtcaaaatcgcaacattttgaaatatagggggcgaaaagtgcacttta 4357552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 20919383 - 20919334
Alignment:
Q  171 caaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||| |||||| ||||||||||| || ||||||||||| ||||||||    
T  20919383 caaaatcgcaacattttgaaacttaggggtcgaaaagtgcagtttagcct 20919334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 36729187 - 36729256
Alignment:
Q  16 ctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa 85  Q
    ||||||||||| ||||||||  ||||||  ||||||||||| |||||||||  |||| |||| |||||||    
T  36729187 ctgagaagacgccacatgtcccaaaaaaaaggtcataatcgaaactttttgagaagataaggggtcaaaa 36729256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 43793695 - 43793630
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||  ||| ||||||| |||||| || |||| ||| |||||||||||||| ||||||||    
T  43793695 ttttttaatagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcagtttagcct 43793630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 20079195 - 20079151
Alignment:
Q  172 aaaatcacaacatgttgaaacttagtgggcgaaaagtgcaattta 216  Q
    ||||||||||||| || |||||||| |||||||||||||| ||||    
T  20079195 aaaatcacaacattttaaaacttagggggcgaaaagtgcagttta 20079151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 2e-57; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 38716405 - 38716193
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||||||||||||||||    
T  38716405 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttctcttatgttagga 38716306  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||||||||||||||||| |||||||| ||||||| |||| ||| ||||||||||  ||||||||||| |||||| || |||||||| ||| ||||||    
T  38716305 ggtcaaaagagcatatttccctaaacatatggggtcacttttgccatttttttaatagggggtcaaaatcgcaacattttaaaacttagagggtgaaaag 38716206  T
Q  208 tgcaatttagcct 220  Q
    || | ||||||||    
T  38716205 tgaagtttagcct 38716193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 11176119 - 11175905
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| ||||||| |||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  11176119 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 11176020  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||| |||||||||    
T  11176019 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaa 11175920  T
Q  207 gtgcaatttagcctt 221  Q
    ||| | |||||||||    
T  11175919 gtgaagtttagcctt 11175905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 2986898 - 2986696
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||  ||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  2986898 aaaattgctgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 2986799  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| ||||  ||  ||||||||||  ||| ||||||| |||||| ||||||||||  |||||||||    
T  2986798 ggtcaaaagagcatatttccctaaacatagggggtcacttttgtcattttttttaatagggggccaaaatcgcaacattttgaaacttaaagggcgaaaa 2986699  T
Q  207 gtg 209  Q
    |||    
T  2986698 gtg 2986696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 40 - 209
Target Start/End: Complemental strand, 4588042 - 4587870
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| || |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  4588042 aaaaggggtcataatcgcaactttttgtaaagataaggggttaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagg 4587943  T
Q  140 gggtcatttttccca---ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtg 209  Q
    |||||| |||| |||   ||||||||||  ||| ||||||| |||||| ||||||||||| ||||||||||||    
T  4587942 gggtcacttttgccatttttttttaatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtg 4587870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 220
Target Start/End: Complemental strand, 15735268 - 15735063
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| ||||||| ||||||||| ||||||||| ||||||||||    
T  15735268 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaatacatatttcccttatgttacgaggtcaaaa 15735169  T
Q  117 gagcatatttccttaaacatagggggtcatttttcccatt--ttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatt 214  Q
    ||||||||||||  ||||||||||||||| |||| |||||  ||||||||  ||  ||||||| |||||| ||||||||||| |||||||||||| | ||    
T  15735168 gagcatatttcccaaaacatagggggtcacttttgccatttcttttaataggggaccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtt 15735069  T
Q  215 tagcct 220  Q
    ||||||    
T  15735068 tagcct 15735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 18537920 - 18538133
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||| ||||||||||| ||||| |||| |||||||| |||||||| || |||||| ||    
T  18537920 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttccctaatgttatga 18538019  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||| ||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||| |||||||||    
T  18538020 ggtcaaaaaagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaa 18538119  T
Q  207 gtgcaatttagcct 220  Q
    ||| | ||||||||    
T  18538120 gtgaagtttagcct 18538133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 6763809 - 6764024
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| | ||||||| |||||||| ||||| |||| |||||||| |||||||  ||||||||||||    
T  6763809 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccgtaatcgctactttttgtaaagataaggggtcaaaaagcatattttccttatgttagga 6763908  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||  ||||||| |||||| ||||||||||| |||||||||    
T  6763909 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggaccaaaatcgcaacattttgaaacttagagggcgaaaa 6764008  T
Q  207 gtgcaatttagccttg 222  Q
     || | ||||||||||    
T  6764009 atgaagtttagccttg 6764024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 9051120 - 9051332
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| | | ||||  |||||||||  |||||||||||||||||| ||||| |||  |||||||| |||||||| ||||||||||||    
T  9051120 aaaattgctgagaagacgccccgtgtcccaaaaaagggc-cataatcgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgttagga 9051218  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| ||||||||||| |||| |||| |||  ||||||||||  ||||||||||| |||||| || |||||||| |||||||||    
T  9051219 ggtcaaaagagcatatttccctaaacatagggagtcacttttgccattttttttaatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaa 9051318  T
Q  207 gtgcaatttagcct 220  Q
    ||| | ||||||||    
T  9051319 gtgaagtttagcct 9051332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 30714366 - 30714579
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||||||||  |||||||||| ||||||| |||||||||| ||||| || | |||||||| |||||||| ||||||||||||    
T  30714366 aaaattgctgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaagataacgggtcaaaaagcatatttcccttatgttagga 30714465  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    ||||||||||||||||||||  ||||||||||||||| |||| |||  ||||||||||  ||| ||||||  |||||| || ||| |||| |||||||||    
T  30714466 ggtcaaaagagcatatttcccgaaacatagggggtcacttttgccattttttttaatagggggccaaaattgcaacattttaaaatttagagggcgaaaa 30714565  T
Q  207 gtgcaatttagcct 220  Q
    ||| | ||||||||    
T  30714566 gtgaagtttagcct 30714579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 220
Target Start/End: Original strand, 25298901 - 25299105
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||| | ||| ||||  |||||||||| |||||||||||||||||| ||||| ||||  ||||||||||||||||  |||||||| ||||||||||    
T  25298901 tgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagggatcaaaaaacatatttcctttatgttaagaggtcaaaa 25299000  T
Q  117 gagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaattt 215  Q
    |||||||||||| |||||||||||||||| |||| ||| ||||||||||  |||  |||||| |||||| ||||||||||| ||||||||| || | |||    
T  25299001 gagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggctaaaatcgcaacattttgaaacttagagggcgaaaattgaagttt 25299100  T
Q  216 agcct 220  Q
    |||||    
T  25299101 agcct 25299105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 9787771 - 9787573
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||| ||||||||| ||||| |||| |||||||| |||||||| |||||||||| |    
T  9787771 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgtaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagca 9787672  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| ||||||||| |||||| |||| ||| ||||||||||  ||||||||||  |||||| || |||| ||| |||||||||    
T  9787671 ggtcaaaagagcatatttccctaaacatagtgggtcacttttgccatttttttaatagggggtcaaaattgcaacattttaaaacatagggggcgaaaa 9787573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 15700928 - 15700746
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||    
T  15700928 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagg 15700829  T
Q  140 gggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||| || | |||  ||||||||||  ||  ||||||| |||||| || |||||||  |||||||||||| | ||||||||    
T  15700828 gggtcacttgtgccattttttttaataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagcct 15700746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 22191257 - 22191107
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| |||||||||| || ||| ||||  ||||||||| ||||||||| ||||||||| ||||| |||| |||||||  |||||||| ||||||||||||    
T  22191257 aaaattgctgagaaggcgccacgtgtcccaaaaaaggg-tcataatcgtaactttttgtaaagataaggggtcaaaaggcatatttcccttatgttagga 22191159  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
     ||||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  22191158 agtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttt 22191107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 36464491 - 36464289
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaac-atatttctctta 100  Q
    |||||| |||| ||||||||||| | ||| ||||| |||||||||| |||| |||||||||||||  |||| |||||||||||| |  ||||||| ||||    
T  36464491 tcgtcccaaaattgctgagaagatgtcacgtgtctcaaaaaaggggccata-tcgcaactttttgagaagataaggagtcaaaagattatatttccctta 36464393  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtggg 200  Q
    ||||||| |||||||||| ||||||||| |||||||  ||||||| |||| |||||||||||  | ||||||||||| |||||| || |||||||  |||    
T  36464392 tgttagggggtcaaaagatcatatttccctaaacat--ggggtcacttttgccattttttaaataggggtcaaaatcgcaacattttaaaacttaagggg 36464295  T
Q  201 cgaaaa 206  Q
    ||||||    
T  36464294 cgaaaa 36464289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 17368428 - 17368314
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    ||||||| |||||||||| ||| ||||  |||||||||| |||||| ||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  17368428 aaaaatgttgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 17368329  T
Q  109 ggtcaaaagagcata 123  Q
    |||||||||||||||    
T  17368328 ggtcaaaagagcata 17368314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 22387159 - 22387287
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtc-ataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagg 107  Q
    |||| ||||||||||||| ||| ||||  |||||||||| | |||||| ||||| |||| | ||| |||| ||||||||||||||||||| |||||||||    
T  22387159 aaaattgctgagaagacgccacttgtcccaaaaaagggggccataatcacaactctttgtatagataaggggtcaaaaaacatatttctcatatgttagg 22387258  T
Q  108 aggtcaaaagagcatatttccttaaacat 136  Q
     |||||||||||||||||||  |||||||    
T  22387259 gggtcaaaagagcatatttcactaaacat 22387287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 331896 - 331773
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    |||| |||||||||||||||||||||||| ||||| || |  |||||||| |||||||| |||| |||||  |||||||||||||||||||| |||||||    
T  331896 aaaataggggtcataatcgcaactttttgcaaagataatggatcaaaaaagcatatttcccttaagttagagggtcaaaagagcatatttccctaaacat 331797  T
Q  137 agggggtcatttttcccatttttt 160  Q
     |  ||||| |||| |||||||||    
T  331796 ggaaggtcacttttgccatttttt 331773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 220
Target Start/End: Original strand, 26829210 - 26829390
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    ||||| |||| ||||||| ||||||||||  | || |||| ||||||| | |||||||| ||||||||||| |||| |||||||||||||||||||||||    
T  26829210 aaaaagggggccataatcacaactttttgagatgataaggggtcaaaagatcatatttcccttatgttagg-ggtccaaagagcatatttccttaaacat 26829308  T
Q  137 agggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
      | ||||| ||||  |||||||| |||  ||| ||||||| |||||| || |||||||  ||  |||||||||| ||||||||    
T  26829309 --gaggtcacttttgtcattttttcatagggggccaaaatcgcaacattttaaaacttaagggatgaaaagtgcactttagcct 26829390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 4104909 - 4105040
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    |||||| |||| ||||||||||||| ||| |||    |||||||||||||||||||||||||||| ||| | |||| ||||||| | |||||| | ||||    
T  4104909 tcgtcccaaaattgctgagaagacgccacgtgttcctaaaaaggggtcataatcgcaactttttgtaaatataaggtgtcaaaagagcatattcccctta 4105008  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaa 133  Q
    ||||| ||||||||||||  |||||||| ||||    
T  4105009 tgtta-gaggtcaaaagaatatatttccctaaa 4105040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 28365729 - 28365590
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    |||||| |||| ||||||||||||| ||   |||  |||||| ||||||||||||||||||||||  |||| |||| || |||| | |||||||| || |    
T  28365729 tcgtcccaaaattgctgagaagacgccatgcgtcccaaaaaaagggtcataatcgcaactttttgagaagataaggggttaaaagatcatatttccctca 28365630  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggg 141  Q
    ||||||| ||||||| |||||||||||| |||| |||||||    
T  28365629 tgttagg-ggtcaaacgagcatatttccctaaatatagggg 28365590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 1020559 - 1020478
Alignment:
Q  52 aatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaa 133  Q
    |||| |||||||||| ||||| || | | |||||| |||||||||||||||||||  |||||||| ||||||||||| ||||    
T  1020559 aatcacaactttttgaaaagataaagggacaaaaatcatatttctcttatgttagagggtcaaaatagcatatttccataaa 1020478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 2190740 - 2190617
Alignment:
Q  14 tgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtc 112  Q
    |||||||||| ||  |||||||  |||| | ||||||||| |||||||||||| ||||| |||| | ||||  | |||||||  |||| |||||  ||||    
T  2190740 tgctgagaagccgcaacatgtcccaaaatatgggtcataaccgcaactttttgtaaagataaggggccaaacgagcatattttccttaagttagagggtc 2190641  T
Q  113 aaaagagcatatttccttaaacat 136  Q
    |||||||||||||||| |||||||    
T  2190640 aaaagagcatatttccctaaacat 2190617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 36464511 - 36464572
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaattta 216  Q
    ||||||||||| || |||||||| |||||| |||||||||||  ||||||||||||| ||||    
T  36464511 ttttttaataagggatcaaaatcgcaacattttgaaacttaggaggcgaaaagtgcagttta 36464572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 211
Target Start/End: Complemental strand, 2123584 - 2123384
Alignment:
Q  13 atgctgagaagacgacacatgtcttaaaaaaggg-gtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttaggagg 110  Q
    |||||||||||||| ||||||||  |||| |||| |||| ||| ||||||||||| ||||| || | ||||||| ||| |||||| || | | |||  |     
T  2123584 atgctgagaagacgccacatgtcccaaaacagggtgtcaaaattgcaactttttgtaaagataaagggtcaaaagaacttatttccctaaagatagagga 2123485  T
Q  111 tcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgc 210  Q
    |||||||||||||||||  ||||| ||| ||||||   ||  |||||||| |  | || |||||||| |||||| |||||| ||||  |||||||| |||    
T  2123484 tcaaaagagcatatttctataaacttagagggtcaaaattttcatttttttaatagggatcaaaatcgcaacattttgaaatttaggaggcgaaaaatgc 2123385  T
Q  211 a 211  Q
    |    
T  2123384 a 2123384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 21494626 - 21494555
Alignment:
Q  45 gggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    ||||||||| |||||||||||| ||||| |||    ||||||||||||||||||| ||||||  ||||||||    
T  21494626 gggtcataaacgcaactttttgtaaagataagagaacaaaaaacatatttctcttctgttagagggtcaaaa 21494555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 15147854 - 15147801
Alignment:
Q  111 tcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataa 165  Q
    |||||||||||||||||| ||||||| |||||||| |||| || |||||||||||    
T  15147854 tcaaaagagcatatttccctaaacat-gggggtcacttttgcctttttttaataa 15147801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 11176147 - 11176212
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||  ||||||||||| |||||| ||||||| |||  ||| ||||||||| ||||||||    
T  11176147 ttttttaatagggggtcaaaatcgcaacattttgaaacataggaggccaaaagtgcactttagcct 11176212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 30714339 - 30714274
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||  ||| ||||||| |||||| || |||| ||| |||||||||||||| ||||||||    
T  30714339 ttttttaatagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcct 30714274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 9e-57; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 17648455 - 17648241
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||| | ||| |||| |||||| |||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  17648455 aaaattgctgagaagaggccacgtgtcctaaaaagggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 17648356  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||  | | |||||||||||||| ||||||||||| |||||||||    
T  17648355 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggagccaaaatcacaacattttgaaacttagagggcgaaaa 17648256  T
Q  207 gtgcaatttagcctt 221  Q
    ||| | |||||||||    
T  17648255 gtgaagtttagcctt 17648241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 38630267 - 38630068
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  ||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  38630267 aaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 38630168  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| ||||||||||| |||| |||| |||  ||||||||||  || |||||||| |||||| ||||||||||| |||||||||    
T  38630167 ggtcaaaagagcatatttccctaaacatagggagtcacttttaccattttttttaataggggatcaaaatcgcaacattttgaaacttagagggcgaaaa 38630068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 30784357 - 30784568
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||| | ||| ||||  |||||||||  |||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||    
T  30784357 aaaattgctgagaagaagtcacgtgtcccaaaaaagggc-cataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagga 30784455  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||| ||||||| |||| |||  ||||||||||| ||| ||||||| |||||| ||||||||||| |||||||||    
T  30784456 ggtcaaaagagcatatttccctaaacatacggggtcacttttgccattttttttaataaggggccaaaatcgcaacattttgaaacttagagggcgaaaa 30784555  T
Q  207 gtgcaatttagcc 219  Q
    ||| | |||||||    
T  30784556 gtgaagtttagcc 30784568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 4518967 - 4519173
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||| ||||||    
T  4518967 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggagatcaaaa 4519066  T
Q  117 gagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatt 214  Q
    |||||||||||| |||||||||||||||| |||| |||  ||||||||||  | | ||||||| |||||| ||||||||||| || ||||||||| | ||    
T  4519067 gagcatatttccctaaacatagggggtcacttttgccattttttttaatagggagccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtt 4519166  T
Q  215 tagcctt 221  Q
    |||||||    
T  4519167 tagcctt 4519173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 12723353 - 12723555
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||  ||||  |||||||||  |||||||||||||||||| ||||| || | ||||||||||||||||| ||||||||||||    
T  12723353 aaaattgctgagaagacgccatgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataacgggtcaaaaaacatatttcccttatgttagga 12723452  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||| |||||||||    
T  12723453 ggtcaaaagagcatatttctctaaacatagggggtcatttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaa 12723552  T
Q  207 gtg 209  Q
    |||    
T  12723553 gtg 12723555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 19924477 - 19924275
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  ||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  19924477 aaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 19924378  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    ||||| ||||| |||||||| |||||||||||||||| |||| |||  ||||||||||| ||| ||||||  |||||| || |||||||| |||||||||    
T  19924377 ggtcagaagagtatatttccctaaacatagggggtcacttttgccattttttttaataaggggccaaaattgcaacattttaaaacttagagggcgaaaa 19924278  T
Q  207 gtg 209  Q
    |||    
T  19924277 gtg 19924275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 19391479 - 19391630
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||    
T  19391479 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagga 19391578  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  19391579 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttt 19391630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 208
Target Start/End: Original strand, 8802492 - 8802692
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| |||||||   |||||||||| |||||||||||||||||| ||||| |||| |||||||| | |||||| ||||||||||||    
T  8802492 aaaattgctgagaagacgccacatgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagc-tatttcccttatgttagga 8802590  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| ||||||||| |||||| |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||| |||||||||    
T  8802591 ggtcaaaagagcatatttccctaaacatagagggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaa 8802690  T
Q  207 gt 208  Q
    ||    
T  8802691 gt 8802692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 5192363 - 5192582
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||  ||||||||||||||||| ||||||||| ||    
T  5192363 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagaggtcaaaaaacatatttcccttatgttaaga 5192462  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |||  ||||||||||  ||  ||||||| |||||| || |||||||| |||||||||    
T  5192463 ggtcaaaagagcatatttccctaaacataggaggtcacttttgccattttttttaatagaggaccaaaatcgcaacattttaaaacttagagggcgaaaa 5192562  T
Q  207 gtgcaatttagccttgatga 226  Q
    ||| | |||| |||| ||||    
T  5192563 gtgaagtttaacctttatga 5192582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 44147182 - 44146970
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||  | ||  ||||||||||||||||||||||||||| | ||||| |||| |||||||| |||||||| ||||||||||||    
T  44147182 aaaattgctgagaagacgccatgtatcccaaaaaaggggtcataatcgcaactttt-gtaaagataaggggtcaaaaagcatatttcccttatgttagga 44147084  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||| ||||||||||| |||||||| ||||||| |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||| | |||||||||    
T  44147083 ggtcaaaatagcatatttccctaaacata-ggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttggagggcgaaaa 44146985  T
Q  207 gtgcaatttagcctt 221  Q
    ||| | |||||||||    
T  44146984 gtgaagtttagcctt 44146970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 211
Target Start/End: Original strand, 21666366 - 21666569
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||  ||||  |||||||||| |||||| |||||||| |  ||||| |||| ||||||||||||||||| |||||||||||     
T  21666366 aaaattgctgagaagacgccatgtgtcccaaaaaaggggccataattgcaactttatctaaagataaggggtcaaaaaacatatttcccttatgttaggg 21666465  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||| ||||||||||||| ||||||| |||||||| |||| ||| ||||||||||  ||| ||||||| |||||| |||||||| || |||| |||||    
T  21666466 ggtcaagagagcatatttccctaaacatggggggtcacttttgccatttttttaatagggggccaaaatcgcaacattttgaaactaagggggcaaaaag 21666565  T
Q  208 tgca 211  Q
    ||||    
T  21666566 tgca 21666569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 4807699 - 4807906
Alignment:
Q  16 ctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaa 115  Q
    ||||||||||| ||| |||   |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| |||||||||||||||||||    
T  4807699 ctgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaa 4807798  T
Q  116 agagcatatttccttaaacatag-ggggtcatttttcccatttttt--aataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaa 212  Q
    ||| ||||||||||||||||||| ||||||| |||| | |||||||  ||||  |||   ||||| |||||| ||||||||||   ||||||||||| |     
T  4807799 agaacatatttccttaaacatagaggggtcacttttgctattttttttaatagggggcataaatcgcaacattttgaaacttaaaaggcgaaaagtgaag 4807898  T
Q  213 tttagcct 220  Q
    ||||||||    
T  4807899 tttagcct 4807906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 21929967 - 21930106
Alignment:
Q  81 caaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcac 179  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| |||| ||| ||||||||||  ||||||||||| |    
T  21929967 caaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatttttttaatagggggtcaaaatcgc 21930065  T
Q  180 aacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||| ||||||||||| |||||||||||| | ||||||||    
T  21930066 aacattttgaaacttagagggcgaaaagtgaagtttagcct 21930106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 219
Target Start/End: Complemental strand, 33895578 - 33895375
Alignment:
Q  16 ctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaa 115  Q
    ||||||||||| ||| ||||  |||||||||  |||||| ||||||||||| ||||| |||| || |||||||||||||| |||||||||||||||||||    
T  33895578 ctgagaagacgccacgtgtccaaaaaaagggc-cataattgcaactttttgtaaagataaggggttaaaaaacatatttcccttatgttaggaggtcaaa 33895480  T
Q  116 agagcatatttccttaaacatagggggtca-tttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatt 214  Q
    ||||||||||||| |||||||||||| ||| |||| |   ||||||||||  |   ||||||  |||||| || |||||||| |||||||||||| | ||    
T  33895479 agagcatatttccctaaacataggggatcacttttgctttttttttaatatggaaccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtt 33895380  T
Q  215 tagcc 219  Q
    |||||    
T  33895379 tagcc 33895375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 22452258 - 22452478
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttat 101  Q
    |||||| |||| ||||||||||||| ||| ||||  |||||| |||  ||| ||||||||||||| ||||| |||  |||||||| |||||||| |||||    
T  22452258 tcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaaagggctatattcgcaactttttgtaaagataagaggtcaaaaagcatatttcccttat 22452357  T
Q  102 gttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccc--attttttaataacgggtcaaaatcacaacatgttgaaacttagtgg 199  Q
    ||||||||||||||||||||||||||| |||| ||| | ||||| |||| ||   ||||||||||  ||  ||||||| ||| || |||||| |||| ||    
T  22452358 gttaggaggtcaaaagagcatatttccctaaatatatgaggtcacttttgccgttttttttaataggggaccaaaatcgcaatattttgaaatttagggg 22452457  T
Q  200 gcgaaaagtgcaatttagcct 220  Q
    || ||||||| | ||||||||    
T  22452458 gctaaaagtggagtttagcct 22452478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 32400414 - 32400565
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||  ||| |||   ||||||||||||||||| ||||||||||| ||||| ||   |||||||  |||||||| |||||||||||     
T  32400414 aaaattgctgagaagacaccacgtgttccaaaaaaggggtcataattgcaactttttgtaaagataaatggtcaaaaggcatatttcccttatgttaggg 32400513  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    ||||||||| |||||||||  |||||||||||||||| |||| |||||||||    
T  32400514 ggtcaaaagcgcatatttcactaaacatagggggtcacttttgccatttttt 32400565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 7117199 - 7117418
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    ||||||||||| ||||||||||||| ||||||||  |||||| ||| |||||| ||||||||||| ||||| |||| || |||| |||| ||| | |||     
T  7117199 tcgtcctaaaactgctgagaagacgccacatgtcccaaaaaaagggccataattgcaactttttgtaaagataaggggttaaaagaacacattccccttc 7117298  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtg 198  Q
    ||||||  |||||||||||||||||||  |||||||  ||||||| |||| |||  ||||||||||   |||||||||| |||| | ||||||||||       
T  7117299 tgttagtgggtcaaaagagcatatttctctaaacat--ggggtcacttttgccattttttttaataggtggtcaaaatcgcaactttttgaaacttaagt 7117396  T
Q  199 ggcgaaaagtgcaatttagcct 220  Q
    || || ||||||| ||||||||    
T  7117397 ggtgataagtgcagtttagcct 7117418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 4423115 - 4423259
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    |||||| |||| ||||||||||| | ||||||| | |||||| ||||||||||||||| |||||| ||||| |||| ||||||| | |||||||| ||||    
T  4423115 tcgtcccaaaattgctgagaagatgccacatgt-taaaaaaaagggtcataatcgcaattttttgaaaagataaggggtcaaaagatcatatttccctta 4423213  T
Q  101 tgtta-ggaggtcaaaagagcatatttccttaaacatagggggtca 145  Q
    ||||| |||||| |||||| ||||||||| ||||||| ||||||||    
T  4423214 tgttatggaggttaaaagaacatatttccataaacatggggggtca 4423259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 220
Target Start/End: Original strand, 15869428 - 15869638
Alignment:
Q  7 ctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgtta 105  Q
    |||||| |||||||||| || ||| ||||  |||| ||||||||||||||||||||||||  ||||||    ||||||| | ||||||||||||| ||||    
T  15869428 ctaaaattgctgagaagtcgccacgtgtcccaaaacaggggtcataatcgcaactttttgagaagacagatggtcaaaagatcatatttctctta-gtta 15869526  T
Q  106 ggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaa 205  Q
     |||||||||||||||||||||  ||||||||   ||||| ||||  |||||||| |  | |||  ||||||||||||| ||||||||||| | || |||    
T  15869527 -gaggtcaaaagagcatatttctctaaacata--aggtcacttttagcattttttgaataggggctaaaatcacaacattttgaaacttagggagccaaa 15869623  T
Q  206 agtgcaatttagcct 220  Q
    |||||| ||||||||    
T  15869624 agtgcagtttagcct 15869638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 3208199 - 3208063
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    |||||| |||| | ||||||||||| ||| ||||  |||||| |||||||||||||||||||||   |||| |||| ||||||| | |||||||| ||||    
T  3208199 tcgtcccaaaattactgagaagacgccacgtgtcccaaaaaatgggtcataatcgcaactttttaagaagataaggggtcaaaatatcatatttccctta 3208100  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatag 138  Q
    ||||||| |||||||||| ||||||||| |||||||||    
T  3208099 tgttagg-ggtcaaaagaacatatttccctaaacatag 3208063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 209
Target Start/End: Original strand, 18881628 - 18881795
Alignment:
Q  42 aaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacataggg 140  Q
    ||||||||||||| ||||||||||| ||||| |||| ||||||| | | |||||| |||||||||| || |||||| ||||||||||| |||||||   |    
T  18881628 aaggggtcataattgcaactttttgtaaagataaggggtcaaaagagcgtatttcccttatgttagaagctcaaaatagcatatttccctaaacat---g 18881724  T
Q  141 ggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtg 209  Q
    ||||| |||| |||  ||||||||||  ||||||||||  ||||||  | |||||||| ||||||||||||    
T  18881725 ggtcacttttgccattttttttaatagggggtcaaaattgcaacattataaaacttagggggcgaaaagtg 18881795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 18252971 - 18253127
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctctta 100  Q
    |||||| |||| ||||||||||||| ||| ||||  |||| || || ||||||| ||||||||||  |||| |||| ||||||||| |||||||| ||||    
T  18252971 tcgtcccaaaattgctgagaagacgccacgtgtcccaaaacagtggccataatcacaactttttgagaagataaggggtcaaaaaatcatatttccctta 18253070  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    ||||| | |||||||| | ||||||||| |||||||  ||||||| |||| |||||||||    
T  18253071 tgttatg-ggtcaaaaaaacatatttccctaaacat--ggggtcacttttaccatttttt 18253127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 23565301 - 23565215
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttc 95  Q
    |||| ||||||||||||| ||||||| | |||||| ||| |||||||||||||||||| ||||| |||| |||||||| ||||||||    
T  23565301 aaaattgctgagaagacgccacatgtttaaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttc 23565215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 3380363 - 3380199
Alignment:
Q  56 gcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtca-tttttccca 154  Q
    ||||||||||| | ||| |||  ||||||||||||||||| |||||| |||  || ||||||||||||||| | ||||||| |||||||| | ||| |      
T  3380363 gcaactttttgtagagataagaggtcaaaaaacatatttcccttatgctagagggacaaaagagcatatttacctaaacatggggggtcactattttcat 3380264  T
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    ||||||||||  | | ||||||| |||||| ||||||||||  ||| ||||| |||| |||||||    
T  3380263 ttttttaatagggagccaaaatcgcaacattttgaaacttaaagggtgaaaaatgcagtttagcc 3380199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 206
Target Start/End: Complemental strand, 1824777 - 1824621
Alignment:
Q  49 cataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatt 147  Q
    |||| |||||||||||||  |||| ||| ||| |||| | |||||||  ||||||||||| |||||||||||||||||||| |||||||  ||||||| |    
T  1824777 catactcgcaactttttgagaagataagaagttaaaagatcatattttccttatgttagg-ggtcaaaagagcatatttccctaaacat--ggggtcact 1824681  T
Q  148 tttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    ||| ||| ||||||||||  || ||||||  ||||||| || |||||||| |||| ||||    
T  1824680 tttgccatttttttaataggggatcaaaaatacaacattttaaaacttagggggcaaaaa 1824621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 206
Target Start/End: Complemental strand, 1859222 - 1859066
Alignment:
Q  49 cataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatt 147  Q
    |||| |||||||||||||  |||| ||| ||| |||| | |||||||  ||||||||||| |||||||||||||||||||| |||||||  ||||||| |    
T  1859222 catactcgcaactttttgagaagataagaagttaaaagatcatattttccttatgttagg-ggtcaaaagagcatatttccctaaacat--ggggtcact 1859126  T
Q  148 tttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    ||| ||| ||||||||||  || ||||||  ||||||| || |||||||| |||| ||||    
T  1859125 tttgccatttttttaataggggatcaaaaatacaacattttaaaacttagggggcaaaaa 1859066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 41688238 - 41688330
Alignment:
Q  45 gggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    ||||||||||||||||||||||  |||| |||| ||||||| | || |||| |||||||||| | |||||||||| ||||||||  |||||||    
T  41688238 gggtcataatcgcaactttttgagaagataaggggtcaaaatatcagatttttcttatgttaaggggtcaaaagaacatatttctctaaacat 41688330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 23565232 - 23565132
Alignment:
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||| ||||||||||| |||||||||||| ||| |||| |||  ||||||||||  ||||||||||  |||||| ||||||| ||  |||||||||    
T  23565232 ggtcaaaa-agcatatttccataaacataggggatcacttttgccattttttttaatagggggtcaaaattgcaacattttgaaacataaggggcgaaaa 23565134  T
Q  207 gt 208  Q
    ||    
T  23565133 gt 23565132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 19392806 - 19392871
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||  ||| ||||||| |||||| ||||||||||| |||||||||||| | ||||||||    
T  19392806 ttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcct 19392871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 31268498 - 31268340
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaagggg-tcataatcgcaactttttggaaagacaaggagtc-aaaaaacatatttctctt 99  Q
    ||||||||||| |||| |||||||| | ||||||  |||||||||| |||||||| |||||||||  ||||| || | ||| ||| | |||| ||| |||    
T  31268498 tcgtcctaaaattgctaagaagacgccgcatgtcccaaaaaaggggatcataatcacaactttttataaagataaagggtctaaagagcata-ttccctt 31268400  T
Q  100 atgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    |||||| | || ||||||||||||||||| ||||||  ||| |||| |||| || ||||||    
T  31268399 atgttatg-gggcaaaagagcatatttccctaaacacggggagtcacttttgccttttttt 31268340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 21224444 - 21224657
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||| |||||| ||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  21224444 aaaattgctgagaagacgccacgtgtctcaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 21224543  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccc--attttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||   |||||||| |  ||||||||||| |||||| ||||||||||| |||||||||    
T  21224544 ggtcaaaagagcatatttccctaaacatagggggtcacttttgcctttttttttaacagggggtcaaaatcgcaacattttgaaacttagagggcgaaaa 21224643  T
Q  207 gtgcaatttagcct 220  Q
    ||| | ||||||||    
T  21224644 gtgaagtttagcct 21224657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 24597607 - 24597819
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||| ||| |||||| |||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||    
T  24597607 aaaattgctgagaagacgccacgtgtctcaaacaaggggccataatcgcaactttttgtaaagagaaggggtcaaaaaacatatttcccttatgttagga 24597706  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||| | |||| |||  ||||||||||  ||| ||||||| |||||| || |||||||| |||||||||    
T  24597707 ggtcaaaagagcatatttccctaaacatagggggttacttttgccattttttttaatagggggacaaaatcgcaacattttaaaacttagagggcgaaaa 24597806  T
Q  207 gtgcaatttagcc 219  Q
    ||| | |||||||    
T  24597807 gtgaagtttagcc 24597819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 20636831 - 20636618
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||| ||| ||| ||||  ||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  20636831 aaaattgctgagaaaacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 20636732  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||  ||| ||||||| |||||| || |||||||| |||| ||||    
T  20636731 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttaaaacttagagggcaaaaa 20636632  T
Q  207 gtgcaatttagcct 220  Q
    ||| | ||||||||    
T  20636631 gtgaagtttagcct 20636618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 218
Target Start/End: Complemental strand, 2331225 - 2331015
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  ||||||  || |||||||||||||||||| ||||| ||||||||||||| |||||||| ||||||||||||    
T  2331225 aaaattgctgagaagacgccacttgtcccaaaaaataggccataatcgcaactttttgtaaagataaggagtcaaaaagcatatttcccttatgttagga 2331126  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||| ||| ||||||  |||||| || |||||||| || |||||||    
T  2331125 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaataaggggccaaaattgcaacattttaaaacttagaggacgaaaag 2331026  T
Q  208 tgcaatttagc 218  Q
    || | ||||||    
T  2331025 tgaagtttagc 2331015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 219
Target Start/End: Original strand, 19195313 - 19195517
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||||||||  |||||||||| ||||||| |||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  19195313 tgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaa 19195412  T
Q  117 gagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatt 214  Q
    |||| ||||||| |||||||||||||||| |||| |||  ||||||||||  ||||||||||  |||||| || |||||||| ||| |||||||| | ||    
T  19195413 gagcgtatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaattgcaacattttaaaacttagagggtgaaaagtgaagtt 19195512  T
Q  215 tagcc 219  Q
    |||||    
T  19195513 tagcc 19195517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 41452341 - 41452540
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  41452341 aaaattgctgagaagacgacacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 41452440  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    ||||| ||||| |||||||| |||||||| ||||||| |||| |||  ||||||||||  ||| |||||| ||||||| ||||||||||| || ||||||    
T  41452441 ggtcagaagagtatatttccctaaacataaggggtcacttttgccattttttttaatagggggccaaaattacaacattttgaaacttagaggacgaaaa 41452540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 3562521 - 3562726
Alignment:
Q  5 tcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgtt 104  Q
    |||||||  ||||||||||||| ||| |||| ||||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||    
T  3562521 tcctaaacttgctgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgtt 3562620  T
Q  105 aggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcg 202  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||| |||  ||||||||||  ||| |||||||  ||||| ||||||||||| || ||    
T  3562621 aggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccattttttttaatagggggccaaaatcgtaacattttgaaacttagaggacg 3562719  T
Q  203 aaaagtg 209  Q
    |||||||    
T  3562720 aaaagtg 3562726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 27869287 - 27869489
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||  ||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||    
T  27869287 aaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 27869386  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt--aataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||  ||||  |   ||||||| |||||| ||||||||||| |||||||||    
T  27869387 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggctccaaaatcgcaacattttgaaacttagagggcgaaaa 27869486  T
Q  207 gtg 209  Q
    |||    
T  27869487 gtg 27869489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 42271544 - 42271333
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| |||   |||||| ||| |||||||||||||||||| ||| | |||| |||||||| |||||||| ||||||||||||    
T  42271544 aaaattgctgagaagacgccacgtgttccaaaaaaagggccataatcgcaactttttgtaaacataaggggtcaaaaagcatatttcccttatgttagga 42271445  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||   || ||||||| |||||| ||||||||||| |||||||||     
T  42271444 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaataggaggccaaaatcgcaacattttgaaacttagagggcgaaaaa 42271345  T
Q  208 tgcaatttagcc 219  Q
    || |||||||||    
T  42271344 tgaaatttagcc 42271333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 35337622 - 35337827
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||| ||||  ||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||||||||||||    
T  35337622 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaa 35337721  T
Q  117 gagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaattt 215  Q
    |||||||||||| |||||||||||||||| |||| ||| ||||||||||  ||  |||||||  ||||| ||||||||||   |||||||| || |||||    
T  35337722 gagcatatttccctaaacatagggggtcacttttgccatttttttaatagaggaccaaaatcgtaacattttgaaacttaaaaggcgaaaaatgaaattt 35337821  T
Q  216 agcctt 221  Q
     |||||    
T  35337822 tgcctt 35337827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 40 - 208
Target Start/End: Original strand, 48176086 - 48176255
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  48176086 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagg-ggtcaaaagagcatatttccctaaacatagg 48176184  T
Q  140 gggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagt 208  Q
    | || | |||| |||  ||||||||||  ||| ||||||| |||||| ||||||||||| |||||||||||    
T  48176185 gagttacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagt 48176255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 8527007 - 8526795
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||| | ||| ||||| |||||||||| |||||| ||||||||||| ||| | | || |||||||| |||||||| ||||||||||||    
T  8527007 aaaattgctgagaagatgccacgtgtctcaaaaaaggggccataattgcaactttttgtaaaaataggg-gtcaaaaagcatatttcccttatgttagga 8526909  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttt--ttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    ||||||| |||||||||| | ||||||||||||||||||||| |||||||  ||||||  ||||||||||  ||| || ||||||||||| ||| |||||    
T  8526908 ggtcaaatgagcatattttcctaaacatagggggtcatttttgccatttttattaatagggggtcaaaattgcaaaattttgaaacttagagggtgaaaa 8526809  T
Q  207 gtgcaatttagcct 220  Q
    ||| ||||||||||    
T  8526808 gtgaaatttagcct 8526795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 20638663 - 20638490
Alignment:
Q  49 cataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcattt 148  Q
    |||||||||||||||||| ||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  20638663 cataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 20638564  T
Q  149 ttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    || |||  ||||||||||  ||| ||||||| |||||| || |||||||| |||| ||||||| | ||||||||    
T  20638563 ttgccattttttttaatagggggccaaaatcgcaacattttaaaacttagagggcaaaaagtgaagtttagcct 20638490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 31494126 - 31493909
Alignment:
Q  5 tcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgtt 104  Q
    |||||||| ||||||||||||| ||| |||   |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||  ||||||||    
T  31494126 tcctaaaattgctgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatattttccttatgtt 31494027  T
Q  105 aggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttt--ttaataacgggtcaaaatcacaacatgttgaaacttagtgggcg 202  Q
    ||  |||||||||||||||||||| |||||||| ||||||| |||| |||||||  ||||||  ||| |||||||  ||||| ||||||||||| || ||    
T  31494026 agagggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatttttgttaatagggggccaaaatcgtaacattttgaaacttaggggccg 31493928  T
Q  203 aaaagtgcaatttagcctt 221  Q
    ||||||| | |||||||||    
T  31493927 aaaagtggagtttagcctt 31493909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 19919695 - 19919906
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||| |||  || ||||  ||||||||||  |||||| |||||||||| ||||| |||| ||||||||||||||||  ||||||||||||    
T  19919695 aaaattgctgagaaaacgctacgtgtcccaaaaaaggggctataatcacaactttttgtaaagataaggggtcaaaaaacatattttccttatgttagga 19919794  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccc--attttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| ||||||| |||||||| |||| ||   ||||||||||  ||||||||||| |||||| ||||||||||| |||||||||    
T  19919795 ggtcaaaagagcatatttcc-taaacat-gggggtcacttttgcctttttttttaatagggggtcaaaatcgcaacattttgaaacttagagggcgaaaa 19919892  T
Q  207 gtgcaatttagcct 220  Q
    ||| | ||||||||    
T  19919893 gtgaagtttagcct 19919906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 17305969 - 17305764
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaagggg-tcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaa 115  Q
    |||||||||| ||||||||  |||||||||| |||||||| |||||||||| ||| | |||| |||||||| |||||||| |||||||||||||||||||    
T  17305969 tgagaagacgccacatgtcccaaaaaagggggtcataatcacaactttttgtaaaaataaggggtcaaaaagcatatttcccttatgttaggaggtcaaa 17305870  T
Q  116 agagcatatttccttaaacatagggggtcatttttccca---ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaa 212  Q
    ||||||||||| | |||||||| ||||||| |||| |||   ||||||||||  ||| ||||||| |||||| ||||||||||| || ||||||||| |     
T  17305869 agagcatattttcctaaacata-ggggtcacttttgccatttttttttaatagggggccaaaatcgcaacattttgaaacttagaggacgaaaagtgaag 17305771  T
Q  213 tttagcc 219  Q
    |||||||    
T  17305770 tttagcc 17305764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 208
Target Start/End: Original strand, 13577878 - 13578077
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| |||   |||||||||| ||||||  |||||||||| | ||| || | |||||||| |||||||| |||||||||||     
T  13577878 aaaattgctgagaagacgccacgtgttccaaaaaaggggccataatttcaactttttgtatagataaagggtcaaaaagcatatttcccttatgttagg- 13577976  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||  ||||||||||  ||||||||||| |||||| ||||||||||| |||||||||    
T  13577977 ggtcaaaagagcatatttccttaaacata-ggggtcacttttgccattttttttaatagagggtcaaaatcgcaacattttgaaacttagggggcgaaaa 13578075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 18754396 - 18754560
Alignment:
Q  47 gtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcat 146  Q
    |||||||||||||| ||||| ||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| || |||     
T  18754396 gtcataatcgcaacattttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagaggatcac 18754495  T
Q  147 ttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtg 209  Q
    |||| |||  ||||||||||  ||  ||||||| |||||| ||||||||||| ||||||||||||    
T  18754496 ttttgccattttttttaataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtg 18754560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 219
Target Start/End: Original strand, 36746603 - 36746806
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||| ||||  ||||||||||||||||||||||||||||| ||||| |||| || ||||  |||||||||||||||||||||||||||||    
T  36746603 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggttaaaaggcatatttctcttatgttaggaggtcaaaa 36746702  T
Q  117 gagcatatttccttaaacatagggggtcatttttccc--attttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatt 214  Q
    |||||||||||| ||||||||| |||| | |||| ||   ||||||||||  ||| ||||||  |||||| || |||| ||| |||||||||||| | ||    
T  36746703 gagcatatttccctaaacatagtgggttacttttgcctttttttttaatagggggccaaaattgcaacattttaaaacatag-gggcgaaaagtgtagtt 36746801  T
Q  215 tagcc 219  Q
    |||||    
T  36746802 tagcc 36746806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 208
Target Start/End: Original strand, 11843270 - 11843470
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| | |   |||||||||| |||||| ||||||||||| || || |||| |||||||| |||||||  |||||||||||     
T  11843270 aaaattgctgagaagacgccacgtattcaaaaaaaggggccataattgcaactttttgtaaggataaggggtcaaaaagcatattttccttatgttagg- 11843368  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |||  ||||||||||  ||||||||||| |||||| ||||||||||  | |||||||    
T  11843369 ggtcaaaagagcatatttccctaaacataggaggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttgaaacttaaggagcgaaaa 11843468  T
Q  207 gt 208  Q
    ||    
T  11843469 gt 11843470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 44077955 - 44078175
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttgg-aaagacaaggagtcaaaaaacatatttctctta 100  Q
    |||||| |||| |||| |||||||| ||  ||||  ||||| |  ||||||||||||||||||| | ||||| |||| ||||||||||||||||||||||    
T  44077955 tcgtcccaaaattgctaagaagacgccatgtgtcccaaaaaggatgtcataatcgcaacttttttgtaaagataaggggtcaaaaaacatatttctctta 44078054  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt--aataacgggtcaaaatcacaacatgttgaaacttagtg 198  Q
    |||||||||||||||||||||||||||| |||||||    ||||| |||  |||||||||  ||||  ||||||||||| |||| | || |||||||| |    
T  44078055 tgttaggaggtcaaaagagcatatttccctaaacatgataggtcactttcgccatttttttaaatagggggtcaaaatcgcaacgttttaaaacttagag 44078154  T
Q  199 ggcgaaaagtgcaatttagcct 220  Q
    | | ||||||||| ||||||||    
T  44078155 gac-aaaagtgcagtttagcct 44078175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 40 - 219
Target Start/End: Complemental strand, 10655510 - 10655330
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    |||| |||||||||||||||||||||| ||||| |||| || |||||| ||||||||||||| ||||| | | |||||||||||||||| ||||||||||    
T  10655510 aaaatgggtcataatcgcaactttttgtaaagataaggggttaaaaaa-atatttctcttatattaggggattaaaagagcatatttccctaaacatagg 10655412  T
Q  140 gggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    || |||||||| | |  ||||||||||| ||| |||||   |||||| || |||||||| |||| ||||||| | |||||||    
T  10655411 ggatcatttttgcaattttttttaataaggggccaaaactgcaacattttaaaacttagggggcaaaaagtggagtttagcc 10655330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 26385478 - 26385262
Alignment:
Q  4 gtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatg 102  Q
    ||||||||| |||| | |||||| ||||||||  |||| | ||| ||||||||||||||||||  |||| |||  ||||||| | |||||||||||||||    
T  26385478 gtcctaaaattgctaataagacgccacatgtcccaaaacatgggccataatcgcaactttttgagaagataagaggtcaaaatatcatatttctcttatg 26385379  T
Q  103 ttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcg 202  Q
    ||||| |||||||| ||||||||||| |||||||   |||||| |||| |||||||||||||  ||  ||||| | ||| || |||||| |||| || ||    
T  26385378 ttagg-ggtcaaaatagcatatttccctaaacatgatgggtcacttttgccattttttaataggggaccaaaaacgcaatattttgaaatttaggggacg 26385280  T
Q  203 aaaagtgcaatttagcct 220  Q
    ||||||||| ||||||||    
T  26385279 aaaagtgcagtttagcct 26385262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 21225634 - 21225851
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttat 101  Q
    ||||||||||| || |||||||||| ||| |||   |||||| || ||||||||||||||||||| |||||| ||| |||||| | |||||||| |||||    
T  21225634 tcgtcctaaaattgttgagaagacgtcacgtgttccaaaaaatgg-tcataatcgcaactttttgtaaagacgaggggtcaaatagcatatttcccttat 21225732  T
Q  102 gttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatt-ttttaataacgggtcaaaatcacaacatgttgaaacttagtggg 200  Q
    |||||| |||||||||||||||||||| ||||||||| |||||  |||| ||||| ||||||||  | |  |||||| |||||| || |||||||   ||    
T  21225733 gttagg-ggtcaaaagagcatatttccctaaacatagagggtcgcttttgccattgttttaatagagagctaaaatcgcaacat-tttaaacttaagtgg 21225830  T
Q  201 cgaaaagtgcaatttagcctt 221  Q
    |||||| |||| |||||||||    
T  21225831 cgaaaaatgcagtttagcctt 21225851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 39440211 - 39440328
Alignment:
Q  8 taaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttag 106  Q
    ||||| || |||||||||| |||||||| ||||| |||||||||||||||||||||||| ||||| ||||  |||||| | |||||||| ||||||||||    
T  39440211 taaaattgttgagaagacgccacatgtcctaaaacaggggtcataatcgcaactttttgaaaagataagggatcaaaagatcatatttcccttatgttag 39440310  T
Q  107 gaggtcaaaagagcatat 124  Q
    |||||||||||| |||||    
T  39440311 gaggtcaaaagatcatat 39440328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 10023906 - 10024010
Alignment:
Q  39 aaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatag 138  Q
    ||||||||| |||| ||||||||||||| ||||| |||| ||||||||| ||||||  ||||||| ||| |||||||||||||||||||| |||||||||    
T  10023906 aaaaaggggccatattcgcaactttttgtaaagataaggggtcaaaaaaaatattttccttatgtaagggggtcaaaagagcatatttccctaaacatag 10024005  T
Q  139 ggggt 143  Q
    |||||    
T  10024006 ggggt 10024010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 4193762 - 4193637
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttagg 107  Q
    |||| |||||| |||||| ||| ||||| |||||||||| |||||| ||||||||||| ||||| |||| ||||||| | |||||||||||||||||| |    
T  4193762 aaaattgctgaaaagacgtcacgtgtctcaaaaaaggggccataattgcaactttttgaaaagataaggggtcaaaagatcatatttctcttatgttaag 4193663  T
Q  108 aggtcaaaagagcatatttccttaaac 134  Q
     |||||||||||||||||||| |||||    
T  4193662 -ggtcaaaagagcatatttccctaaac 4193637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 14624819 - 14624606
Alignment:
Q  4 gtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgt 103  Q
    |||| |||| ||||||||| | | ||| ||||  |||||||||| |||||| ||||||||||| ||||| || | ||||||||  ||||||| |||||||    
T  14624819 gtcccaaaattgctgagaacatgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaagggtcaaaaagtatatttcccttatgt 14624720  T
Q  104 taggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcga 203  Q
    || | |||||||||||||||||| | |||||||   |||| | |||| |||||||||||| | ||| ||||||| ||| || ||||||||||| || |||    
T  14624719 tatg-ggtcaaaagagcatattttcctaaacat--tgggttacttttgccattttttaat-aggggccaaaatcgcaatattttgaaacttaggggacga 14624624  T
Q  204 aaagtgcaatttagcctt 221  Q
    |||||| | |||||||||    
T  14624623 aaagtgtagtttagcctt 14624606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 218
Target Start/End: Complemental strand, 25002883 - 25002712
Alignment:
Q  45 gggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggt 143  Q
    ||||||||||||||| ||| ||  |||| |||| ||||||| | ||||||||  |||||||||| |||||||||||||| ||||| |||||||  |||||    
T  25002883 gggtcataatcgcaaatttatgagaagataaggggtcaaaagatcatatttcctttatgttagg-ggtcaaaagagcatgtttccctaaacat--ggggt 25002787  T
Q  144 catttttcccattt-tttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagc 218  Q
    ||||||| |||||| |||||||  ||| |||||||||||||| ||||||||||| |  ||||||||||| ||||||    
T  25002786 catttttgccatttatttaatag-gggccaaaatcacaacattttgaaacttagggcacgaaaagtgcagtttagc 25002712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 39182151 - 39181939
Alignment:
Q  4 gtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatg 102  Q
    |||| |||| ||||||||| ||  ||| ||||  |||| || || ||||||||||||||||||  |||| |||| ||||||| | |||||||| ||||||    
T  39182151 gtcccaaaattgctgagaaaacaccacgtgtcccaaaacagaggccataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatg 39182052  T
Q  103 ttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtggg 200  Q
    ||| |  ||||||||||||||||||| |||||||  |||||||||||| |||  ||||||||||   || ||||||| |||||| || |||||| | |||    
T  39182051 ttatg--gtcaaaagagcatatttccctaaacat--ggggtcatttttgccattttttttaataggaggccaaaatcgcaacattttaaaacttggaggg 39181956  T
Q  201 cgaaaagtgcaatttag 217  Q
    | ||||||||| |||||    
T  39181955 ccaaaagtgcagtttag 39181939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 219
Target Start/End: Complemental strand, 26126437 - 26126255
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    |||| ||||| ||||||||||||||||||  |||| |||| ||||||| | |||||||| ||||||||||| |||||||| ||||||||||| |||||||    
T  26126437 aaaacaggggccataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttagg-ggtcaaaaaagcatatttccctaaacat 26126339  T
Q  137 agggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
     ||| | ||   || |||  ||||||||||  ||||||||||| |||||| || ||||||||   || |||||||||||||||||    
T  26126338 -gggagccaaaatttccattttttttaatagagggtcaaaatcgcaacattttcaaacttaggctgccaaaagtgcaatttagcc 26126255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 9157183 - 9157351
Alignment:
Q  50 ataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcattt 148  Q
    |||||||||||||||||  |||| |||  ||||||| | |||||||| ||||||||||| |||||||||||||||||| | |||||||  ||  ||| ||    
T  9157183 ataatcgcaactttttgagaagataagtggtcaaaagatcatatttcacttatgttagg-ggtcaaaagagcatattttcctaaacatttgg--tcactt 9157279  T
Q  149 ttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    || ||||||||| |  | || ||||||||||||||| |||||| |||| || |||||| |||| ||||||||    
T  9157280 ttgccatttttttaatagggatcaaaatcacaacattttgaaatttaggggacgaaaaatgcagtttagcct 9157351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 3403136 - 3403295
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctctta 100  Q
    |||||| |||| | ||||| ||||| ||||||||  ||||||| |||||||||||||| ||||||  || | ||||  |||||| | |||||||| ||||    
T  3403136 tcgtcccaaaattcctgaggagacgccacatgtcccaaaaaagtggtcataatcgcaagtttttgagaacataagggatcaaaagatcatatttccctta 3403235  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    ||||||| |||||||||||||||||| | || ||||  ||||||| ||||  ||||||||    
T  3403236 tgttagggggtcaaaagagcatattttcctatacatgaggggtcacttttgtcatttttt 3403295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 216
Target Start/End: Original strand, 24448165 - 24448339
Alignment:
Q  39 aaaaaggggtcataatcgcaactttttggaaagacaaggagtca-aaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacata 137  Q
    ||||||||| ||||||| ||  |||||| ||||| |||| |||| ||||||||||||| ||||||||||| |||||||| |||||||||||     || |    
T  24448165 aaaaaggggccataatcacatttttttgtaaagataaggggtcataaaaacatatttcccttatgttagggggtcaaaaaagcatatttcc-----caca 24448259  T
Q  138 gggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaattta 216  Q
     || || |||||| ||| ||||||||||| ||||||||||| |||||| || |||||||   || |||||||| ||||||    
T  24448260 tggtgttatttttgccatttttttaataaggggtcaaaatcgcaacattttaaaacttaaatggagaaaagtgaaattta 24448339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 221
Target Start/End: Complemental strand, 5111622 - 5111440
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    |||||||||| ||||||||||||||||||  |||| |||| ||||||| | |||||||| ||||||||||| |||||||||| ||||||| | |||||||    
T  5111622 aaaaaaggggccataatcgcaactttttgagaagataaggggtcaaaatatcatatttcccttatgttagg-ggtcaaaagaacatattttcctaaacat 5111524  T
Q  137 agggggtca-tttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
      ||||||| ||||  || |||||| | |   || |||||||||||  | ||||||||||  ||| |||||||||| |||||||||    
T  5111523 --ggggtcacttttatcctttttttcacaggaggccaaaatcacaagtttttgaaacttaaggggtgaaaagtgcactttagcctt 5111440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 24464790 - 24464660
Alignment:
Q  7 ctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgtta 105  Q
    |||||| ||||||||||||| ||||||||  |||| |  |  |||||||||||| |||||  |||| |||| ||||||| | |||||||| |||||||||    
T  24464790 ctaaaattgctgagaagacgccacatgtcacaaaacaatgaccataatcgcaacattttgagaagataaggggtcaaaagatcatatttcccttatgtta 24464691  T
Q  106 ggaggtcaaaagagcatatttccttaaacat 136  Q
    || |||||||||| ||||||||| |||||||    
T  24464690 gggggtcaaaagaacatatttccctaaacat 24464660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 23439798 - 23439654
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaa 115  Q
    ||||||| || ||| ||||  |||| |||||||||||||||||||||||  ||||| ||||  |||||| | |||||||| |||| |||||   ||||||    
T  23439798 tgagaagccgccacgtgtcccaaaacaggggtcataatcgcaacttttttaaaagataagggatcaaaagagcatatttcccttaagttagagagtcaaa 23439699  T
Q  116 agagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    | | ||||||||||||||||| ||| |||| |||| |||||||||    
T  23439698 atatcatatttccttaaacatggggagtcacttttgccatttttt 23439654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 160
Target Start/End: Original strand, 4571464 - 4571585
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    |||| ||||| || |||||||||||||||  |||| |||| ||||||| | |||||||| ||||||||| | ||| |||||||||||||||| |||||||    
T  4571464 aaaacaggggccacaatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggggtaaaaagagcatatttccctaaacat 4571563  T
Q  137 agggggtcatttttcccatttttt 160  Q
       |||||| |||| |||||||||    
T  4571564 --tgggtcacttttgccatttttt 4571585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 15681834 - 15681722
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttaggaggtcaaa 115  Q
    |||||||||| ||| ||||  ||||||| || ||||||||||||||||||  |||| |||| ||||||| | |||| ||| ||||||||||| |||||||    
T  15681834 tgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgacaagataaggggtcaaaagatcatagttcccttatgttagggggtcaaa 15681735  T
Q  116 agagcatatttcc 128  Q
    ||| |||| ||||    
T  15681734 agatcatagttcc 15681722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 6650729 - 6650646
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa 85  Q
    |||||| |||| || |||||||||| ||||||||| |||| ||||| ||||||||||||||||||  |||| |||| |||||||    
T  6650729 tcgtcccaaaattgatgagaagacgccacatgtctcaaaacaggggccataatcgcaactttttgagaagataaggggtcaaaa 6650646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 5087215 - 5087121
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttc 95  Q
    |||||| |||| || |||||||||| ||| ||||  |||| |||| ||||||||||||||||||| ||||| |||| ||||||||| ||||||||    
T  5087215 tcgtcccaaaattgatgagaagacgccacgtgtcccaaaatagggatcataatcgcaactttttgaaaagataaggggtcaaaaaatcatatttc 5087121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 6650653 - 6650542
Alignment:
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt-aataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||||||||||||||||| |||| ||  ||||||  |||| ||||||||| ||||| ||| ||||||| ||| || || |||||||| ||||||| ||    
T  6650653 ggtcaaaagagcatatttccctaaatat--ggggtcccttttgccatttttttaataaggggccaaaatcgcaaaattttaaaacttagggggcgaacag 6650556  T
Q  208 tgcaatttagcctt 221  Q
    |||| |||||||||    
T  6650555 tgcagtttagcctt 6650542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 27869260 - 27869194
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    ||||||||||  ||||||||||| |||||| ||||||| ||| |||||||||||||| |||||||||    
T  27869260 ttttttaatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctt 27869194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 3769586 - 3769489
Alignment:
Q  40 aaaaggggtcataatcgcaact-ttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    ||||||| |||||||||||||| ||||| ||||| |||   ||||||| |||||||||| ||||||| | |||||||| ||||||||||  |||||||    
T  3769586 aaaagggatcataatcgcaacttttttgtaaagataagagatcaaaaagcatatttctcatatgttaaggggtcaaaaaagcatatttctctaaacat 3769489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 6798076 - 6798133
Alignment:
Q  79 gtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    |||||||| |||||||| ||||||||||  |||||||||||||||||||| |||||||    
T  6798076 gtcaaaaatcatatttcccttatgttagagggtcaaaagagcatatttccctaaacat 6798133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 23461121 - 23461246
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaaca-tatttctcttatgttaggaggtcaaa 115  Q
    ||||||| || ||| ||||  |||| |||||||||||||||||||||||| || || || |  |||||| | | ||||||||||| |||||  |||||||    
T  23461121 tgagaagccgccacgtgtcccaaaacaggggtcataatcgcaactttttgaaatgataaaggatcaaaagagaatatttctcttaagttagagggtcaaa 23461220  T
Q  116 agagcatatttccttaaacatagggg 141  Q
    | | ||||||||||||||||| ||||    
T  23461221 ataacatatttccttaaacatggggg 23461246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 43251482 - 43251349
Alignment:
Q  5 tcctaaaaatgctgagaagacgac-acatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatg 102  Q
    ||||||||||| |||||||||| | || ||||  |||||| ||||| |||||| |||||||||  |||| || ||||||||| | |||||||| ||||||    
T  43251482 tcctaaaaatgttgagaagacgcccacgtgtccaaaaaaaagggtcttaatcgtaactttttgagaagataaagagtcaaaagatcatatttcccttatg 43251383  T
Q  103 ttaggaggtcaaaagagcatatttccttaaacat 136  Q
    ||||  ||||||||||| | |||| | |||||||    
T  43251382 ttagagggtcaaaagagtacattttcctaaacat 43251349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 9822185 - 9822296
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    |||||| |||| ||||||||||||| ||  ||||   ||||||||||||||||||||||||||||  |||| |||| ||||||| | | |||||| ||||    
T  9822185 tcgtcccaaaattgctgagaagacgccatgtgtc-ccaaaaaggggtcataatcgcaactttttgagaagataaggggtcaaaagatcgtatttccctta 9822283  T
Q  101 tgttaggaggtca 113  Q
    ||||||| |||||    
T  9822284 tgttagggggtca 9822296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 10724110 - 10724221
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    |||||| |||| ||||||||||||| ||  ||||   ||||||||||||||||||||||||||||  |||| |||| ||||||| | | |||||| ||||    
T  10724110 tcgtcccaaaattgctgagaagacgccatgtgtc-ccaaaaaggggtcataatcgcaactttttgagaagataaggggtcaaaagatcgtatttccctta 10724208  T
Q  101 tgttaggaggtca 113  Q
    ||||||| |||||    
T  10724209 tgttagggggtca 10724221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 136
Target Start/End: Complemental strand, 19493524 - 19493404
Alignment:
Q  15 gctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtca 113  Q
    |||||||||||| ||| |||| ||||| ||||| ||||||| | ||||||||  |||| || | ||||||||| |||||||  |||||||| || |||||    
T  19493524 gctgagaagacgccacgtgtcctaaaacaggggccataatcac-actttttgagaagataaagggtcaaaaaatcatattttccttatgtttgg-ggtca 19493427  T
Q  114 aaagagcatatttccttaaacat 136  Q
    ||| ||||||||||| |||||||    
T  19493426 aaatagcatatttccataaacat 19493404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 20636870 - 20636924
Alignment:
Q  167 gggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    ||||||||||| |||||| ||||||| ||| |||||||||||||| |||||||||    
T  20636870 gggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctt 20636924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 33237505 - 33237703
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttagg 107  Q
    |||| ||||||||||||| ||| ||||  |||| || |||||||||| |||||||||   |||  |||| ||||||| | |||||| | ||||| |||||    
T  33237505 aaaattgctgagaagacgccacgtgtcccaaaacagtggtcataatcacaacttttttagaaggtaaggggtcaaaatatcatattacccttattttagg 33237604  T
Q  108 aggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
     ||| ||||||||||||| || ||||||| ||| | | |||  |  |||||||||||  | ||||||||| |||||| || |||| ||| |||| ||||    
T  33237605 gggtgaaaagagcatattgccctaaacatggggtgacttttgccatattttttaatagggagtcaaaatcgcaacattttaaaacctagagggcaaaaa 33237703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 39182173 - 39182239
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    ||||||||||  ||||||||||  |||||| || |||||||| |||||||||||||| |||||||||    
T  39182173 ttttttaatagggggtcaaaattgcaacatttttaaacttagggggcgaaaagtgcagtttagcctt 39182239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 24597581 - 24597516
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||  ||| |||||||||||||| ||||||| |||  ||||||||||||| ||||||||    
T  24597581 ttttttaatagggggccaaaatcacaacattttgaaacataggaggcgaaaagtgcactttagcct 24597516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 15681730 - 15681682
Alignment:
Q  88 catatttctcttatgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    |||| ||| ||||||||||| |||||||||||||||||||| |||||||    
T  15681730 catagttcccttatgttagggggtcaaaagagcatatttccctaaacat 15681682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 23473194 - 23473050
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaa 115  Q
    ||||||| || ||| ||||  |||| || |||||||||| |||||||||| ||||| |||    ||||| | |||||||| |||| |||||  |||||||    
T  23473194 tgagaagccgccacgtgtcccaaaacagaggtcataatcacaactttttgaaaagataagataccaaaagagcatatttcccttaagttagagggtcaaa 23473095  T
Q  116 agagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    | | || |||||||||||||| ||| |||| |||| |||||||||    
T  23473094 ataacacatttccttaaacatggggagtcacttttaccatttttt 23473050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 25002943 - 25003011
Alignment:
Q  153 cattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    ||||||||||||| ||  ||||||| |||||| || |||||||| ||||||||||| || |||||||||    
T  25002943 cattttttaataagggaccaaaatcgcaacattttaaaacttagggggcgaaaagtacagtttagcctt 25003011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 29051789 - 29051714
Alignment:
Q  50 ataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatattt 126  Q
    |||||||||||||||||  |||| |||| |||||||| ||| |||||||||| ||| | ||||||| ||||||||||    
T  29051789 ataatcgcaactttttgagaagataaggggtcaaaaatcatttttctcttatattatg-ggtcaaaggagcatattt 29051714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 39440171 - 39440119
Alignment:
Q  168 ggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||||||| |||||| |||||| ||||  ||||||||||||||||||||||    
T  39440171 ggtcaaaatcccaacattttgaaatttaggtggcgaaaagtgcaatttagcct 39440119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 21810079 - 21810145
Alignment:
Q  153 cattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||||  |||| |||||||||| || || |||||||| |||||||||||||| ||||||||    
T  21810079 cattttttaatag-gggttaaaatcacaatattttaaaacttagggggcgaaaagtgcactttagcct 21810145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 24448111 - 24448044
Alignment:
Q  153 cattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||||||||||||  || |||||||| |||||| || |||||| | |||||||||||||| ||||||||    
T  24448111 cattttttaataggggatcaaaatcgcaacattttaaaacttggggggcgaaaagtgcagtttagcct 24448044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 8527034 - 8527100
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    ||||||||||  ||| ||||||| |||||| ||||||  ||| |||||||||||||| |||||||||    
T  8527034 ttttttaatagggggccaaaatcgcaacattttgaaatatagggggcgaaaagtgcactttagcctt 8527100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 7365442 - 7365341
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    |||||| |||| ||||||||||| | ||| ||||  |||| || ||  |||||||||||||||||  |||| |||||||||||| | |||||||| ||||    
T  7365442 tcgtcccaaaattgctgagaagatgtcacgtgtcccaaaacagaggcaataatcgcaactttttgagaagataaggagtcaaaatatcatatttccctta 7365343  T
Q  101 tg 102  Q
    ||    
T  7365342 tg 7365341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 46267342 - 46267394
Alignment:
Q  13 atgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaacttttt 65  Q
    ||||| ||||| || ||||||||  |||||||||| |||||||||||||||||    
T  46267342 atgcttagaagccgccacatgtcccaaaaaaggggccataatcgcaacttttt 46267394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 2141 - 2352
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  ||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||| | ||||||||||||    
T  2141 aaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatattgcccttatgttagga 2240  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||  ||| ||||||| |||| | || ||||||||  |||||||||    
T  2241 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggccaaaatcgcaac-ttttaaaacttagaaggcgaaaag 2339  T
Q  208 tgcaatttagcct 220  Q
    || | ||||||||    
T  2340 tggactttagcct 2352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 5742 - 5955
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||| ||||||| ||| ||||  |||||||||  |||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||    
T  5742 aaaattgctgcgaagacgccacgtgtcccaaaaaagggc-cataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagga 5840  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt--aataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||  ||||  ||| ||||||| ||| || ||||||||||| || ||||||    
T  5841 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaaatagggggccaaaatcgcaatattttgaaacttagaggccgaaaa 5940  T
Q  207 gtgcaatttagcctt 221  Q
    ||| | |||||||||    
T  5941 gtgaagtttagcctt 5955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 208
Target Start/End: Complemental strand, 19494 - 19296
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||| |||||||||||     
T  19494 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagg- 19396  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaag 207  Q
    |||||||||||||||||||| |||||||| ||||||| |||| ||| ||||||||||  ||||||||||| |||||| |||||||||||  |||||||||    
T  19395 ggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatttttttaatagggggtcaaaatcgcaacattttgaaacttaggaggcgaaaag 19297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 38 - 221
Target Start/End: Complemental strand, 61997 - 61812
Alignment:
Q  38 aaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacata 137  Q
    |||||||||| |||||| ||||||||||| ||||| |||| |||||||| |||||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  61997 aaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggatgtcaaaagagcatatttccctaaacata 61898  T
Q  138 gggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcctt 221  Q
    |||||||| |||| |||  ||||||||||  ||| ||||||| |||||| |||||||||||  ||||||||||| | |||||||||    
T  61897 gggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagaaggcgaaaagtgaagtttagcctt 61812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 3060 - 3254
Alignment:
Q  17 tgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaa 116  Q
    |||||||||| ||| ||||  ||||||| || |||||| ||||||||||| ||||| |||  ||||||||||||||||| ||||||||||||||||||||    
T  3060 tgagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataagaggtcaaaaaacatatttcccttatgttaggaggtcaaaa 3159  T
Q  117 gagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtg 209  Q
    |||||||||||| |||||||||| ||||| |||| |||  ||||||||||  ||||||||||  |||||| ||||||||||| ||||||||||||    
T  3160 gagcatatttccctaaacataggaggtcacttttgccattttttttaatagggggtcaaaattgcaacattttgaaacttagagggcgaaaagtg 3254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 3025 - 2961
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    ||||||||||  ||| ||||||| |||||| ||||||| ||| |||||||||||||| |||||||    
T  3025 ttttttaatagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 2961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 25056 - 25270
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  |||||||||| ||||||| ||||||||   ||||| |||| |||||||| |||||||| |||||||||||     
T  25056 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaacttttgttaaagataaggggtcaaaaagcatatttcccttatgttaggg 25155  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||  ||||||||||| ||| ||||||| |||||| ||  ||||||| || ||||||    
T  25156 ggtcaaaagagcatatttccctaaacatagggggtcacttttaccattttttttaataaggggccaaaatcgcaacattttagaacttagaggacgaaaa 25255  T
Q  207 gtgcaatttagcctt 221  Q
     || | |||||||||    
T  25256 atgaagtttagcctt 25270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 49840 - 49658
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||    
T  49840 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagg 49741  T
Q  140 gggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||| || | |||  ||||||||||  ||  ||||||| |||||| || |||||||  |||||||||||| | ||||||||    
T  49740 gggtcacttgtgccattttttttaataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagcct 49658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 62379 - 62197
Alignment:
Q  40 aaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagg 139  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||    
T  62379 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagg 62280  T
Q  140 gggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    |||||| || | |||  ||||||||||  ||  ||||||| |||||| || |||||||  |||||||||||| | ||||||||    
T  62279 gggtcacttgtgccattttttttaataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagcct 62197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 1902 - 2067
Alignment:
Q  45 gggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccttaaacatagggggtc 144  Q
    |||||||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  1902 gggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagggggtcaaaatagcatatttccctaaacatagggggtc 2001  T
Q  145 atttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtg 209  Q
    | |||| ||| |||||| | || || |||||||| |||||| ||||||||||| ||| ||||||||    
T  2002 acttttgccattttttttaaaagggatcaaaatcgcaacattttgaaacttagagggtgaaaagtg 2067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 142039 - 142240
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| |||| |||||||| ||| ||||  |||||| ||| |||||||||||||||||| ||||| |||  |||||||| |||||||| ||||||||||||    
T  142039 aaaattgcttagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgttagga 142138  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||||||| ||||||| |||| |||  ||||||||||  ||  ||||||  |||||| || |||||||| |||||||||    
T  142139 ggtcaaaagagcatatttccctaaacata-ggggtcacttttgccattttttttaataggggaccaaaattgcaacattttaaaacttagagggcgaaaa 142237  T
Q  207 gtg 209  Q
    |||    
T  142238 gtg 142240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 3660 - 3866
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||  | | ||||  ||||||||||  ||||||| ||||||||| ||||| |||| |||||||| |||||||| |||||||||||     
T  3660 aaaattgctgagaagacacctcgtgtcccaaaaaaggggctataatcgaaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggg 3759  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttcccattttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagt 208  Q
    |||||||||||||||||||| |||||||  ||||||| |||| ||||||||| |  | ||||||||||||||| || ||||||||||  | || ||||||    
T  3760 ggtcaaaagagcatatttccctaaacat--ggggtcacttttgccatttttttaataggggtcaaaatcacaatattttgaaacttatggagcaaaaagt 3857  T
Q  209 gcaatttag 217  Q
    ||| |||||    
T  3858 gcagtttag 3866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 208
Target Start/End: Complemental strand, 2203 - 2008
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttagga 108  Q
    |||| ||||||||||||| ||| ||||  ||||||||||  ||||||||||||||||| ||||| | || |||||||| ||| |||| ||||||||||||    
T  2203 aaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagatatggggtcaaaaagcatgtttcccttatgttagga 2104  T
Q  109 ggtcaaaagagcatatttccttaaacatagggggtcatttttccca--ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaa 206  Q
    |||||||||||||||||||| |||      ||||||| |||| |||  ||||||||||  ||||||||||| |||||| || |||||||| |||||||||    
T  2103 ggtcaaaagagcatatttccctaa------ggggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaa 2010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 66379 - 66254
Alignment:
Q  16 ctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgttaggaggtcaaa 115  Q
    ||||||||||| ||| |||   ||||||||||||||||||||||||||||| ||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  66379 ctgagaagacgccacgtgttcaaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatagttcccttatgttaggaggtcaaa 66280  T
Q  116 agagcatatttccttaaacatagggg 141  Q
    | ||||||||||| ||||||||||||    
T  66279 atagcatatttccctaaacatagggg 66254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 66429 - 66480
Alignment:
Q  171 caaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagccttg 222  Q
    |||||| ||||||| ||||||| ||| |||||||||||||| ||||||||||    
T  66429 caaaattacaacattttgaaacatagggggcgaaaagtgcagtttagccttg 66480  T

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Target: scaffold0002 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 455239 - 455101
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttagg 107  Q
    |||| ||||||||||||| ||||||||  |||||| |||||||||||||||||||| |  |||| |||| ||||||| | |||||||| |||||||||||    
T  455239 aaaattgctgagaagacgccacatgtcccaaaaaatgggtcataatcgcaacttttagagaagataaggggtcaaaagatcatatttcccttatgttagg 455140  T
Q  108 aggtcaaaagagcatatttccttaaacatagggggtcat 146  Q
     ||| |||||| ||||||| | ||||||| |||||||||    
T  455139 gggttaaaagaacatattttcctaaacatggggggtcat 455101  T

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Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 220
Target Start/End: Complemental strand, 455108 - 454928
Alignment:
Q  44 ggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccttaaacataggggg 142  Q
    ||||||||||||  ||||||| |  |||| |||| ||||||| | | ||||||  |||||||||| ||| |||||||||||||||| ||||||| |||||    
T  455108 ggggtcataatcaaaacttttagagaagataaggggtcaaaagatcgtatttcctttatgttagggggttaaaagagcatatttccctaaacatgggggg 455009  T
Q  143 tcatttttcccatttttt---aataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcct 220  Q
    ||| ||||  ||||||||    |||  ||| |||||||||||| | || ||||||| |||| |||||||||| ||||||||    
T  455008 tcacttttgtcattttttttccatagggggccaaaatcacaactttttaaaacttaatgggtgaaaagtgcactttagcct 454928  T

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Target: scaffold0014 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 112346 - 112214
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    ||||||||||| ||| ||||||||| ||||||||  |||||| ||  ||||| ||||||||||||  |||| |||||||||||| | |||||||| ||||    
T  112346 tcgtcctaaaattgcagagaagacgccacatgtcccaaaaaatggaccataaccgcaactttttgagaagataaggagtcaaaagatcatatttccctta 112247  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaa 133  Q
    ||||||||||||||||  |||||||||| ||||    
T  112246 tgttaggaggtcaaaaaggcatatttccctaaa 112214  T

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Target: scaffold1875 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 841 - 999
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctta 100  Q
    |||||| |||| || |||||||||| || |||||  ||| ||||||||||||| ||||||||||| ||||| |||| ||||||| | |||||||  ||||    
T  841 tcgtcccaaaattgttgagaagacgccagatgtcccaaataaggggtcataattgcaactttttgtaaagataaggggtcaaaagagcatatttacctta 940  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt 160  Q
    |||||| ||||||||| ||||||| ||| |||||||  ||||||| |||| |||||||||    
T  941 tgttagaaggtcaaaatagcatatatccctaaacat-tggggtcacttttgccatttttt 999  T

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Target: scaffold0174 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 29935 - 29717
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaa-catatttctctta 100  Q
    |||||| |||| ||||||||||||| |||| ||   |||  || || |||||| |||||||||||  |||| |||| ||||||| | |||||||| ||||    
T  29935 tcgtcccaaaattgctgagaagacgccacaggttccaaatcagaggccataattgcaactttttgagaagataaggggtcaaaagatcatatttccctta 29836  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttcccatttttt-aataacgggtcaaaatcacaacatgttgaaacttagtgg 199  Q
    ||||||| |||| |||||||||||||||  ||||||  ||||||| ||||  |||||||| ||||| ||  ||||| | |||||| ||||||||||| ||    
T  29835 tgttagg-ggtccaaagagcatatttccccaaacat--ggggtcacttttttcatttttttaataagggtccaaaaactcaacattttgaaacttagggg 29739  T
Q  200 gcgaaaagtgcaatttagcctt 221  Q
    || ||||||||| |||||||||    
T  29738 gcaaaaagtgcagtttagcctt 29717  T

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Target: scaffold0150 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 6043 - 5911
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatgtta-gg 107  Q
    |||| ||||||||||| | ||| ||||  |||||| || ||||||||||||||||||  ||||| |||| |||||||| |||||||| ||||||||| ||    
T  6043 aaaattgctgagaagatgccacgtgtcccaaaaaaagg-tcataatcgcaactttttataaagataaggggtcaaaaagcatatttcccttatgttaggg 5945  T
Q  108 aggtcaaaagagcatatttccttaaacatagggg 141  Q
     |||||||| ||||||||||| ||||||||||||    
T  5944 gggtcaaaatagcatatttccctaaacatagggg 5911  T

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Target: scaffold0291 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 10140 - 10006
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtc-aaaaaacatatttctctta 100  Q
    |||||| |||| || |||||||||| ||||||||  ||||||||||  |||||||||||||||||  |||| |||| ||| ||| | |||||||  ||||    
T  10140 tcgtcccaaaattgttgagaagacgccacatgtcacaaaaaaggggaaataatcgcaactttttgagaagataaggggtctaaagatcatattttcctta 10041  T
Q  101 tgttaggaggtcaaaagagcatatttccttaaacat 136  Q
    ||||| | |||||||||||||||||||| |||||||    
T  10040 tgttatg-ggtcaaaagagcatatttccctaaacat 10006  T

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Target: scaffold0007 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 250610 - 250703
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaaaacatatttctcttatg 102  Q
    |||| ||||||||||||| ||| || |  |||||||||| ||||||| |||||||||| ||||| |||| ||||||||||||||||| ||||||    
T  250610 aaaattgctgagaagacgccacgtgccccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaaaacatatttcccttatg 250703  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 250582 - 250518
Alignment:
Q  155 ttttttaataacgggtcaaaatcacaacatgttgaaacttagtgggcgaaaagtgcaatttagcc 219  Q
    ||||||||||  |||||||| || |||||| || |||| ||| |||||||||||||| |||||||    
T  250582 ttttttaatagggggtcaaagtcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 250518  T

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Target: scaffold0683 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 220
Target Start/End: Complemental strand, 5413 - 5289
Alignment:
Q  97 cttatgttaggaggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaactta 195  Q
    |||| |||||||||||||||||||||||||   |||||||| ||||||| |||| ||| ||||||||||  ||| ||||||  |||||| ||||||| ||    
T  5413 cttacgttaggaggtcaaaagagcatatttttctaaacataaggggtcacttttgccatttttttaatagggggccaaaattgcaacattttgaaacata 5314  T
Q  196 gtgggcgaaaagtgcaatttagcct 220  Q
      |||||| ||||| | ||||||||    
T  5313 aagggcgagaagtgtagtttagcct 5289  T

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Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 3012 - 3119
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgt-cttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctctt 99  Q
    ||||||||||| ||  ||||||||| ||||||| | || ||| ||||||||||||||||||||||| ||| | |||| ||||||| | |||||||  |||    
T  3012 tcgtcctaaaattgaagagaagacgccacatgttcctagaaagggggtcataatcgcaactttttgtaaaaataaggggtcaaaatagcatatttacctt 3111  T
Q  100 atgttagg 107  Q
    ||||||||    
T  3112 atgttagg 3119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 43916 - 44102
Alignment:
Q  9 aaaaatgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaaggagtcaaaa-aacatatttctcttatgttagg 107  Q
    |||| ||||||||||||| ||| ||||  |||| ||||  |||| |||||||||||||  |||| ||   ||||||| | |||||||| |||  ||||||    
T  43916 aaaattgctgagaagacgccacgtgtcccaaaacagggaccatagtcgcaactttttgagaagataaaaggtcaaaagatcatatttccctttcgttagg 44015  T
Q  108 aggtcaaaagagcatatttccttaaacatagggggtcatttttccca-ttttttaataacgggtcaaaatcacaacatgttgaaacttag 196  Q
     |||||||| ||||||||| | |||||||  |||| || |||| ||| ||||||||||  ||| |||||| ||||||| |||||||||||    
T  44016 -ggtcaaaaaagcatattttcctaaacat--gggggcacttttgccatttttttaatagggggccaaaattacaacattttgaaacttag 44102  T

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Target: scaffold0171 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 9252 - 9168
Alignment:
Q  2 tcgtcctaaaaatgctgagaagacgacacatgtcttaaaaaagggg-tcataatcgcaactttttggaaagacaaggagtcaaaa 85  Q
    |||||| |||| |||| |||||||| ||| ||||  |||||||||| ||||||||||||||||||| ||||| || | |||||||    
T  9252 tcgtcccaaaattgcttagaagacgtcacgtgtcccaaaaaagggggtcataatcgcaactttttgaaaagataatgggtcaaaa 9168  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 54577 - 54514
Alignment:
Q  13 atgctgagaagacgacacatgtcttaaaaaaggggtcataatcgcaactttttggaaagacaagg 77  Q
    ||||||||||| || ||||||||  ||||| |||| |||||||||||||||||| ||||| ||||    
T  54577 atgctgagaagccgccacatgtcccaaaaa-ggggccataatcgcaactttttgtaaagataagg 54514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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