View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1433_low_22 (Length: 392)

Name: NF1433_low_22
Description: NF1433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1433_low_22
NF1433_low_22
[»] chr2 (68 HSPs)
chr2 (168-376)||(15861434-15861642)
chr2 (1-102)||(15861708-15861809)
chr2 (6-75)||(4563852-4563921)
chr2 (32-100)||(8383206-8383274)
chr2 (17-100)||(38618446-38618529)
chr2 (42-100)||(11726526-11726584)
chr2 (42-100)||(23377973-23378031)
chr2 (32-100)||(10996267-10996335)
chr2 (17-100)||(29819821-29819904)
chr2 (42-100)||(38181811-38181869)
chr2 (32-97)||(596048-596113)
chr2 (32-97)||(15859605-15859670)
chr2 (15-100)||(38465840-38465925)
chr2 (6-87)||(42530487-42530568)
chr2 (40-100)||(37195081-37195141)
chr2 (31-90)||(13304491-13304550)
chr2 (17-100)||(15119828-15119911)
chr2 (6-97)||(19951499-19951590)
chr2 (40-87)||(32218640-32218687)
chr2 (18-100)||(40204447-40204532)
chr2 (17-100)||(41805280-41805363)
chr2 (18-100)||(1961316-1961398)
chr2 (6-100)||(8740514-8740608)
chr2 (6-100)||(26003486-26003580)
chr2 (42-100)||(33555208-33555266)
chr2 (43-100)||(3714245-3714302)
chr2 (43-100)||(37396236-37396293)
chr2 (32-100)||(19612962-19613030)
chr2 (17-100)||(32460747-32460831)
chr2 (32-100)||(32630427-32630495)
chr2 (32-100)||(37182837-37182905)
chr2 (5-100)||(2050084-2050179)
chr2 (17-100)||(7079421-7079504)
chr2 (49-100)||(11093581-11093632)
chr2 (18-93)||(11342028-11342103)
chr2 (17-100)||(26234075-26234158)
chr2 (37-100)||(42955059-42955122)
chr2 (43-93)||(5762533-5762583)
chr2 (42-100)||(11153236-11153294)
chr2 (17-83)||(40319966-40320032)
chr2 (17-87)||(38581009-38581081)
chr2 (17-97)||(3121476-3121556)
chr2 (32-100)||(3887854-3887922)
chr2 (32-100)||(7667611-7667679)
chr2 (17-97)||(10602348-10602428)
chr2 (40-100)||(12242291-12242351)
chr2 (17-85)||(27331825-27331893)
chr2 (32-100)||(32143457-32143525)
chr2 (32-100)||(36547362-36547430)
chr2 (41-100)||(9431248-9431307)
chr2 (22-97)||(15916787-15916861)
chr2 (40-83)||(31211242-31211285)
chr2 (50-97)||(35024392-35024439)
chr2 (43-85)||(20504275-20504317)
chr2 (42-100)||(31024222-31024280)
chr2 (42-100)||(31101980-31102038)
chr2 (37-83)||(31175107-31175153)
chr2 (37-70)||(604883-604916)
chr2 (43-100)||(18731322-18731378)
chr2 (37-70)||(26269374-26269407)
chr2 (46-87)||(32226643-32226684)
chr2 (32-87)||(35438639-35438691)
chr2 (3-100)||(41824253-41824349)
chr2 (32-100)||(3123954-3124022)
chr2 (30-70)||(5528869-5528909)
chr2 (44-100)||(21183360-21183416)
chr2 (32-100)||(30902324-30902392)
chr2 (32-100)||(43732159-43732227)
[»] chr3 (56 HSPs)
chr3 (17-98)||(29389333-29389414)
chr3 (17-100)||(10872723-10872806)
chr3 (42-100)||(26243710-26243768)
chr3 (6-100)||(50466808-50466901)
chr3 (32-97)||(35987485-35987550)
chr3 (32-100)||(51060684-51060752)
chr3 (17-100)||(331849-331932)
chr3 (17-100)||(12744907-12744990)
chr3 (17-100)||(52215886-52215969)
chr3 (18-100)||(45736738-45736820)
chr3 (32-97)||(37897703-37897768)
chr3 (32-100)||(52866468-52866536)
chr3 (42-100)||(26121570-26121628)
chr3 (43-100)||(26244412-26244469)
chr3 (32-100)||(3074829-3074897)
chr3 (32-100)||(22497002-22497070)
chr3 (32-100)||(24722738-24722806)
chr3 (32-100)||(47334663-47334731)
chr3 (32-100)||(51253721-51253789)
chr3 (41-100)||(3020665-3020724)
chr3 (17-100)||(14756414-14756497)
chr3 (41-100)||(29222854-29222913)
chr3 (17-100)||(29752189-29752271)
chr3 (17-100)||(41743641-41743724)
chr3 (18-100)||(3648750-3648832)
chr3 (42-100)||(27224631-27224689)
chr3 (31-100)||(50745017-50745086)
chr3 (3-91)||(785952-786040)
chr3 (32-100)||(4980324-4980392)
chr3 (32-100)||(8439309-8439377)
chr3 (17-100)||(6124121-6124204)
chr3 (17-100)||(38677571-38677654)
chr3 (57-100)||(43599149-43599192)
chr3 (17-100)||(54595841-54595923)
chr3 (32-98)||(24596944-24597010)
chr3 (37-100)||(35237704-35237769)
chr3 (43-100)||(4181982-4182039)
chr3 (43-100)||(27102158-27102215)
chr3 (43-100)||(51165850-51165907)
chr3 (32-100)||(29512182-29512250)
chr3 (17-100)||(8504856-8504939)
chr3 (17-100)||(30578273-30578356)
chr3 (18-100)||(36344424-36344507)
chr3 (42-100)||(21403947-21404005)
chr3 (50-100)||(40504117-40504167)
chr3 (33-99)||(40760793-40760859)
chr3 (42-100)||(52638064-52638122)
chr3 (6-63)||(336061-336118)
chr3 (32-97)||(9492697-9492762)
chr3 (32-97)||(23444327-23444392)
chr3 (43-100)||(33412497-33412554)
chr3 (43-100)||(41349711-41349768)
chr3 (43-100)||(42449137-42449194)
chr3 (38-87)||(49412312-49412361)
chr3 (48-100)||(40065372-40065424)
chr3 (44-100)||(52931674-52931730)
[»] chr1 (63 HSPs)
chr1 (18-100)||(34953947-34954029)
chr1 (15-100)||(48083555-48083640)
chr1 (34-100)||(50503206-50503272)
chr1 (17-97)||(9590798-9590878)
chr1 (49-100)||(50550157-50550208)
chr1 (42-100)||(31998240-31998298)
chr1 (17-78)||(13043413-13043474)
chr1 (17-100)||(33765793-33765876)
chr1 (18-100)||(26344227-26344309)
chr1 (10-97)||(3549778-3549865)
chr1 (30-97)||(5595474-5595541)
chr1 (17-100)||(8338681-8338764)
chr1 (17-100)||(13877036-13877119)
chr1 (17-100)||(23575369-23575452)
chr1 (17-99)||(40988368-40988450)
chr1 (42-100)||(50154337-50154395)
chr1 (31-100)||(11324484-11324553)
chr1 (31-100)||(11482505-11482574)
chr1 (42-91)||(18353632-18353681)
chr1 (32-85)||(18607151-18607204)
chr1 (32-100)||(2492527-2492595)
chr1 (32-76)||(13048678-13048722)
chr1 (32-76)||(13053675-13053719)
chr1 (32-100)||(42761474-42761542)
chr1 (32-100)||(44349951-44350019)
chr1 (18-97)||(6508404-6508483)
chr1 (17-100)||(6758552-6758635)
chr1 (53-100)||(8397041-8397088)
chr1 (17-100)||(14891789-14891872)
chr1 (42-97)||(26674240-26674295)
chr1 (17-100)||(33939348-33939431)
chr1 (49-100)||(39216154-39216205)
chr1 (39-101)||(37589625-37589687)
chr1 (46-100)||(42629620-42629674)
chr1 (14-100)||(43728189-43728275)
chr1 (18-72)||(46412767-46412821)
chr1 (32-94)||(47969506-47969568)
chr1 (32-100)||(36486560-36486628)
chr1 (18-70)||(39940567-39940619)
chr1 (6-98)||(45010833-45010925)
chr1 (17-100)||(3013616-3013699)
chr1 (41-100)||(8465956-8466015)
chr1 (37-100)||(38468712-38468775)
chr1 (53-100)||(39362851-39362898)
chr1 (17-100)||(45115221-45115304)
chr1 (49-96)||(45639547-45639594)
chr1 (42-100)||(14967276-14967334)
chr1 (42-100)||(36040197-36040255)
chr1 (42-100)||(41007728-41007786)
chr1 (43-100)||(2349807-2349864)
chr1 (43-100)||(3384274-3384331)
chr1 (20-85)||(7461334-7461399)
chr1 (43-100)||(27206791-27206848)
chr1 (43-100)||(34658437-34658494)
chr1 (43-100)||(35049983-35050040)
chr1 (32-84)||(8455074-8455126)
chr1 (32-100)||(15351766-15351834)
chr1 (39-87)||(31325838-31325886)
chr1 (32-96)||(31699008-31699072)
chr1 (32-100)||(31889094-31889162)
chr1 (17-73)||(38834617-38834673)
chr1 (32-100)||(41161486-41161554)
chr1 (32-100)||(50755228-50755296)
[»] chr4 (87 HSPs)
chr4 (32-100)||(4708587-4708655)
chr4 (32-100)||(18423913-18423981)
chr4 (37-97)||(50686059-50686119)
chr4 (13-100)||(4406292-4406379)
chr4 (33-100)||(24448687-24448754)
chr4 (17-100)||(48603570-48603653)
chr4 (15-100)||(4484078-4484163)
chr4 (32-100)||(3511730-3511798)
chr4 (32-100)||(10572772-10572840)
chr4 (32-100)||(39533777-39533845)
chr4 (32-100)||(40952399-40952467)
chr4 (17-100)||(23071412-23071495)
chr4 (42-100)||(36786181-36786239)
chr4 (6-100)||(40881478-40881572)
chr4 (6-100)||(53176359-53176453)
chr4 (17-97)||(55416306-55416384)
chr4 (32-100)||(5816560-5816628)
chr4 (24-100)||(8826916-8826992)
chr4 (6-94)||(41346462-41346550)
chr4 (37-100)||(24331451-24331514)
chr4 (17-100)||(24798133-24798216)
chr4 (32-95)||(38298111-38298174)
chr4 (31-97)||(46803427-46803494)
chr4 (32-94)||(6243682-6243744)
chr4 (32-94)||(7740547-7740609)
chr4 (18-100)||(14450964-14451046)
chr4 (34-100)||(18626758-18626824)
chr4 (32-98)||(19878339-19878405)
chr4 (18-100)||(26920723-26920805)
chr4 (42-100)||(56328501-56328559)
chr4 (32-100)||(10308256-10308329)
chr4 (43-100)||(13689587-13689644)
chr4 (19-80)||(33377486-33377547)
chr4 (32-100)||(16170931-16170999)
chr4 (32-100)||(22493597-22493665)
chr4 (17-77)||(35151667-35151727)
chr4 (32-88)||(35151724-35151780)
chr4 (32-100)||(52914019-52914087)
chr4 (32-100)||(54106526-54106594)
chr4 (17-100)||(2582859-2582942)
chr4 (30-97)||(12070047-12070114)
chr4 (42-97)||(33694000-33694055)
chr4 (17-100)||(36072576-36072659)
chr4 (42-97)||(40575893-40575948)
chr4 (17-100)||(49481886-49481969)
chr4 (17-100)||(54713104-54713187)
chr4 (40-94)||(3762178-3762232)
chr4 (32-85)||(21142156-21142209)
chr4 (43-100)||(24275249-24275306)
chr4 (32-100)||(2865019-2865087)
chr4 (32-84)||(7215547-7215599)
chr4 (33-85)||(24133620-24133672)
chr4 (18-70)||(26636521-26636573)
chr4 (40-100)||(40814698-40814758)
chr4 (4-100)||(48806307-48806403)
chr4 (17-100)||(25138689-25138772)
chr4 (17-100)||(31262645-31262728)
chr4 (49-100)||(46217820-46217871)
chr4 (43-98)||(52817620-52817675)
chr4 (17-63)||(3669562-3669608)
chr4 (50-100)||(25022569-25022619)
chr4 (32-86)||(35425273-35425327)
chr4 (32-70)||(54508190-54508228)
chr4 (13-71)||(54931899-54931957)
chr4 (42-100)||(55936018-55936076)
chr4 (17-94)||(5281192-5281269)
chr4 (15-100)||(7740494-7740579)
chr4 (17-70)||(12168640-12168693)
chr4 (32-100)||(12672468-12672534)
chr4 (39-100)||(21884070-21884131)
chr4 (39-100)||(24870408-24870469)
chr4 (43-100)||(24941143-24941200)
chr4 (43-100)||(25700508-25700565)
chr4 (39-100)||(30035209-30035270)
chr4 (39-100)||(32599508-32599569)
chr4 (43-100)||(51126137-51126194)
chr4 (32-85)||(54931840-54931893)
chr4 (40-100)||(4370429-4370489)
chr4 (32-100)||(5418566-5418634)
chr4 (32-100)||(6462763-6462831)
chr4 (32-100)||(16468255-16468323)
chr4 (48-100)||(18488557-18488609)
chr4 (39-100)||(21649384-21649447)
chr4 (21-57)||(38298184-38298220)
chr4 (42-70)||(38938072-38938100)
chr4 (32-80)||(48995577-48995625)
chr4 (32-100)||(54106496-54106564)
[»] chr8 (49 HSPs)
chr8 (17-100)||(10117021-10117104)
chr8 (33-100)||(35874487-35874554)
chr8 (6-100)||(2296525-2296619)
chr8 (31-100)||(2805864-2805933)
chr8 (30-87)||(9015880-9015937)
chr8 (17-97)||(7258639-7258719)
chr8 (32-100)||(7923413-7923481)
chr8 (42-100)||(11335618-11335676)
chr8 (42-100)||(18603489-18603547)
chr8 (42-100)||(33385222-33385280)
chr8 (32-100)||(3225801-3225869)
chr8 (17-100)||(34326296-34326379)
chr8 (6-97)||(36916578-36916669)
chr8 (32-87)||(45045441-45045496)
chr8 (42-100)||(40640329-40640387)
chr8 (6-100)||(41753809-41753903)
chr8 (17-100)||(10934609-10934692)
chr8 (17-100)||(13290041-13290124)
chr8 (6-97)||(14700236-14700327)
chr8 (17-100)||(23627672-23627755)
chr8 (44-95)||(36058827-36058878)
chr8 (46-100)||(5888387-5888441)
chr8 (6-100)||(7428887-7428981)
chr8 (42-100)||(24017749-24017807)
chr8 (42-100)||(29360799-29360857)
chr8 (43-100)||(14381270-14381327)
chr8 (43-100)||(29916182-29916239)
chr8 (18-94)||(6614742-6614818)
chr8 (32-100)||(7428943-7429011)
chr8 (32-100)||(15285704-15285772)
chr8 (32-100)||(15466073-15466141)
chr8 (32-100)||(27518366-27518434)
chr8 (32-100)||(29424004-29424072)
chr8 (4-100)||(29598934-29599029)
chr8 (32-99)||(6395982-6396049)
chr8 (17-100)||(13496486-13496569)
chr8 (33-72)||(20524188-20524227)
chr8 (17-100)||(24287836-24287919)
chr8 (17-100)||(33070216-33070299)
chr8 (17-100)||(41387813-41387896)
chr8 (42-100)||(7484648-7484706)
chr8 (32-70)||(8506298-8506336)
chr8 (32-97)||(10815466-10815532)
chr8 (30-100)||(13211258-13211328)
chr8 (42-100)||(31505069-31505127)
chr8 (30-99)||(20546690-20546759)
chr8 (32-97)||(34580626-34580691)
chr8 (32-100)||(25267996-25268063)
chr8 (17-96)||(28939423-28939507)
[»] chr7 (66 HSPs)
chr7 (21-100)||(21586865-21586944)
chr7 (30-100)||(30138839-30138909)
chr7 (17-97)||(24280875-24280955)
chr7 (17-100)||(2943263-2943346)
chr7 (31-100)||(27554517-27554586)
chr7 (32-100)||(26904802-26904870)
chr7 (47-101)||(2533990-2534044)
chr7 (32-100)||(4089840-4089908)
chr7 (32-100)||(32549872-32549940)
chr7 (17-100)||(16871990-16872072)
chr7 (17-100)||(23797399-23797482)
chr7 (18-100)||(6455556-6455638)
chr7 (30-100)||(7295075-7295145)
chr7 (32-77)||(9930409-9930454)
chr7 (32-97)||(22752581-22752646)
chr7 (6-87)||(31813406-31813487)
chr7 (31-100)||(45531969-45532038)
chr7 (18-86)||(43103137-43103205)
chr7 (18-97)||(6847283-6847362)
chr7 (1-100)||(8447768-8447867)
chr7 (17-100)||(9555266-9555349)
chr7 (17-100)||(11002367-11002450)
chr7 (6-100)||(1706884-1706978)
chr7 (32-94)||(3882572-3882634)
chr7 (32-98)||(6837588-6837654)
chr7 (46-100)||(21387611-21387665)
chr7 (6-100)||(28306310-28306404)
chr7 (42-100)||(34275242-34275300)
chr7 (32-66)||(37489536-37489570)
chr7 (43-85)||(43130265-43130307)
chr7 (32-70)||(44416613-44416651)
chr7 (32-69)||(21886488-21886525)
chr7 (32-97)||(26385679-26385744)
chr7 (43-100)||(27942357-27942414)
chr7 (31-100)||(39960289-39960358)
chr7 (32-85)||(41106105-41106158)
chr7 (15-96)||(45002080-45002160)
chr7 (31-100)||(46495419-46495488)
chr7 (32-97)||(3882828-3882897)
chr7 (17-93)||(29205318-29205394)
chr7 (17-97)||(31115615-31115695)
chr7 (42-97)||(5084484-5084539)
chr7 (17-100)||(12088862-12088945)
chr7 (6-85)||(26477227-26477306)
chr7 (6-85)||(26553667-26553746)
chr7 (49-100)||(32490640-32490691)
chr7 (57-100)||(35238985-35239028)
chr7 (53-100)||(39136608-39136655)
chr7 (50-100)||(22332336-22332386)
chr7 (6-100)||(25774177-25774271)
chr7 (42-100)||(25814733-25814791)
chr7 (42-100)||(40175975-40176033)
chr7 (6-85)||(46718049-46718130)
chr7 (17-70)||(1706839-1706892)
chr7 (43-100)||(3838170-3838227)
chr7 (43-100)||(4406449-4406506)
chr7 (32-73)||(24617818-24617859)
chr7 (43-100)||(25079239-25079296)
chr7 (40-73)||(33935027-33935060)
chr7 (43-100)||(34703494-34703551)
chr7 (43-100)||(38238816-38238873)
chr7 (43-100)||(40416957-40417014)
chr7 (32-100)||(716285-716353)
chr7 (32-100)||(22106688-22106756)
chr7 (6-70)||(25774263-25774327)
chr7 (32-100)||(40529595-40529663)
[»] chr5 (60 HSPs)
chr5 (17-96)||(71265-71344)
chr5 (18-100)||(3100456-3100538)
chr5 (15-100)||(33075069-33075154)
chr5 (18-97)||(31691313-31691392)
chr5 (30-97)||(31706013-31706080)
chr5 (17-92)||(14772605-14772680)
chr5 (6-100)||(7329977-7330071)
chr5 (32-97)||(30371387-30371452)
chr5 (44-100)||(17153456-17153512)
chr5 (32-100)||(25773294-25773362)
chr5 (32-100)||(35032321-35032389)
chr5 (42-100)||(11795767-11795825)
chr5 (32-97)||(694227-694292)
chr5 (32-85)||(780724-780777)
chr5 (43-100)||(30778032-30778089)
chr5 (42-97)||(5984037-5984092)
chr5 (17-100)||(18033406-18033489)
chr5 (17-100)||(26141761-26141844)
chr5 (41-100)||(33867955-33868014)
chr5 (37-100)||(37685021-37685084)
chr5 (17-100)||(38370438-38370521)
chr5 (42-100)||(5259436-5259494)
chr5 (31-97)||(31154695-31154761)
chr5 (43-100)||(5110568-5110625)
chr5 (43-100)||(13157365-13157422)
chr5 (43-100)||(37870049-37870106)
chr5 (43-100)||(37944634-37944691)
chr5 (32-69)||(41814404-41814441)
chr5 (32-93)||(43482830-43482891)
chr5 (32-100)||(7505117-7505185)
chr5 (44-100)||(8961252-8961308)
chr5 (17-97)||(10437644-10437723)
chr5 (32-100)||(25408594-25408662)
chr5 (17-100)||(1098679-1098761)
chr5 (17-100)||(14153375-14153458)
chr5 (37-100)||(14416432-14416495)
chr5 (42-73)||(15549403-15549434)
chr5 (13-100)||(20518222-20518309)
chr5 (37-100)||(22650907-22650970)
chr5 (32-63)||(26045286-26045317)
chr5 (32-75)||(32398079-32398122)
chr5 (37-100)||(37554398-37554461)
chr5 (42-100)||(1100108-1100166)
chr5 (18-100)||(3100412-3100494)
chr5 (33-87)||(15058887-15058941)
chr5 (6-100)||(37944653-37944747)
chr5 (43-100)||(3851395-3851452)
chr5 (43-100)||(8694515-8694572)
chr5 (43-100)||(9004998-9005055)
chr5 (43-100)||(11262360-11262417)
chr5 (43-100)||(12165335-12165392)
chr5 (43-100)||(17096475-17096532)
chr5 (43-100)||(19531352-19531409)
chr5 (32-69)||(19868943-19868980)
chr5 (51-100)||(35172481-35172530)
chr5 (43-100)||(42013854-42013911)
chr5 (42-70)||(14642097-14642125)
chr5 (49-97)||(16602225-16602273)
chr5 (32-100)||(26300132-26300200)
chr5 (32-100)||(41005719-41005787)
[»] scaffold0149 (1 HSPs)
scaffold0149 (38-100)||(24633-24695)
[»] scaffold0036 (1 HSPs)
scaffold0036 (32-100)||(89649-89717)
[»] chr6 (38 HSPs)
chr6 (6-100)||(33689224-33689318)
chr6 (17-100)||(13281540-13281623)
chr6 (2-100)||(12383640-12383738)
chr6 (32-85)||(11746294-11746347)
chr6 (18-100)||(6032973-6033055)
chr6 (17-100)||(8449625-8449710)
chr6 (17-100)||(8458429-8458514)
chr6 (18-96)||(12383842-12383920)
chr6 (39-100)||(12218496-12218557)
chr6 (32-96)||(3199773-3199837)
chr6 (32-100)||(6560708-6560776)
chr6 (32-100)||(8146000-8146068)
chr6 (32-100)||(18886359-18886427)
chr6 (32-100)||(21506514-21506582)
chr6 (17-100)||(31398277-31398360)
chr6 (17-87)||(11637176-11637246)
chr6 (33-99)||(15467625-15467691)
chr6 (42-100)||(15517121-15517179)
chr6 (32-98)||(31714588-31714654)
chr6 (42-100)||(31996530-31996588)
chr6 (32-100)||(6263371-6263440)
chr6 (6-87)||(13506829-13506910)
chr6 (43-100)||(21998071-21998128)
chr6 (15-100)||(30460664-30460749)
chr6 (20-97)||(31158897-31158973)
chr6 (32-100)||(2827580-2827648)
chr6 (32-100)||(33053786-33053854)
chr6 (30-69)||(14031751-14031790)
chr6 (32-70)||(13277103-13277141)
chr6 (32-94)||(17214252-17214314)
chr6 (6-72)||(28554942-28555008)
chr6 (18-100)||(32254872-32254954)
chr6 (42-100)||(34379766-34379824)
chr6 (43-100)||(10258355-10258412)
chr6 (43-100)||(15467605-15467662)
chr6 (43-100)||(17773533-17773590)
chr6 (32-100)||(5571572-5571640)
chr6 (32-100)||(12104796-12104864)
[»] scaffold0009 (3 HSPs)
scaffold0009 (32-100)||(146019-146087)
scaffold0009 (32-100)||(216294-216362)
scaffold0009 (17-100)||(7708-7791)
[»] scaffold0631 (1 HSPs)
scaffold0631 (15-82)||(4351-4418)
[»] scaffold0341 (2 HSPs)
scaffold0341 (18-97)||(2427-2506)
scaffold0341 (18-97)||(10082-10161)
[»] scaffold0020 (1 HSPs)
scaffold0020 (17-100)||(139302-139385)
[»] scaffold0050 (1 HSPs)
scaffold0050 (15-100)||(6217-6302)
[»] scaffold0026 (1 HSPs)
scaffold0026 (32-100)||(88907-88973)
[»] scaffold0470 (1 HSPs)
scaffold0470 (18-94)||(4028-4104)
[»] scaffold0113 (1 HSPs)
scaffold0113 (40-100)||(40504-40564)
[»] scaffold1476 (1 HSPs)
scaffold1476 (44-100)||(693-748)


Alignment Details
Target: chr2 (Bit Score: 171; Significance: 1e-91; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 168 - 376
Target Start/End: Complemental strand, 15861642 - 15861434
Alignment:
Q  168 cactttaaattataagaatagtca----tgttaacccgttaatggtcccattgggcattgtgtactactggccatgttgaggtgaccaatatggatcatg 263  Q
    ||||||||||||||||||||||||    |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15861642 cactttaaattataagaatagtcagtcatgttaacccgttaat----ccattgggcattgtgtactactggccatgttgaggtgaccaatatggatcatg 15861547  T
Q  264 ttaacctacctacctccgttctcaactccactacttaattgacttgctgacactgattaacatgtaaaatattaatttagtagtgagaccacttaatttt 363  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15861546 ttaacctacctacctctgttctcaactccactacttaattgacttgctgacactgattaacatgtaaaatattaatttagtagtgagaccccttaatttt 15861447  T
Q  364 atttcgtcatttg 376  Q
    |||||||||||||    
T  15861446 atttcgtcatttg 15861434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15861809 - 15861708
Alignment:
Q  1 ataattacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||    
T  15861809 ataattacatcattcggtcactattacacgtaaaaatctatattttagattcgttcaattaattatgtatataatctttattatagatcacgtacatcat 15861710  T
Q  101 cc 102  Q
    ||    
T  15861709 cc 15861708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 4563852 - 4563921
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataat 75  Q
    |||||||||||||||||||||   | |||| |||||||||||||||||||||||||||||||||||||||    
T  4563852 tacatcattcagtcactattattagcaaaagtttatattttagattcattcaattaataatgtatataat 4563921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 8383206 - 8383274
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||||||||||||||||||| ||||||||||| ||  ||||||||||||||||||||||||||    
T  8383206 aaaaatctatattttagattcattcatttaataatgtacatggtctttattatagatcacatacatcat 8383274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 38618529 - 38618446
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | ||||||||| |||||| |||||||||||||| ||||||||  |||||||||||||| ||||||||||||    
T  38618529 gtcactattataaggaaaaatttacattttacattcattcaattaaaaatgtataagatctttattatagaccacatacatcat 38618446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 11726526 - 11726584
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  11726526 attttagattcattcaatcaatgatgtatataatctttattatggatcacatacatcat 11726584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 23377973 - 23378031
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||    
T  23377973 attttagattcattcaattaatgatgtatatgatctttattgtagatcacatacatcat 23378031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 10996267 - 10996335
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| ||||||| ||||||| ||||||||  ||||||||||||| ||||||||||||    
T  10996267 aaaaatttatattttaaattcattgaattaatgatgtatatggtctttattatagaccacatacatcat 10996335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 29819904 - 29819821
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||| ||| ||||||||||||||| ||||||||| | ||| ||||||||||||| ||||||||||||    
T  29819904 gtcactattataagcaaaaatctatgttttagattcattcatttaataatgcacatagtctttattatagaccacatacatcat 29819821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 38181869 - 38181811
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||||||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  38181869 attttacattcattcaattaatgatgtatatagtctttattgtagatcacatacatcat 38181811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 596048 - 596113
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||| |||||||||||||||   |||||| |||||||||||||||||||||||||| ||||||    
T  596048 aaaaattaatattttagattcatcttattaatgatgtatataatctttattatagatcatatacat 596113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 15859670 - 15859605
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||| ||||||||||||||||||||||||| |||||||| || |||||||||||  ||||||||    
T  15859670 aaaaatctatattttagattcattcaattaatgatgtatatgatatttattatagacaacatacat 15859605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 38465925 - 38465840
Alignment:
Q  15 cagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||  | | |||||| || |||||||||||||||||||||| ||||||||  |||||||||| || ||||||||||||    
T  38465925 cagtcactattgtaagcaaaaatctacattttagattcattcaattaatgatgtatatggtctttattatggaccacatacatcat 38465840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 42530487 - 42530568
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattataga 87  Q
    |||||||| | |||||||||| | ||||||||||| |||||||||||||| |||||||| ||||||   |||||||||||||    
T  42530487 tacatcatccggtcactattataagtaaaaatttacattttagattcatttaattaatattgtatacggtctttattataga 42530568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 37195081 - 37195141
Alignment:
Q  40 atattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||| ||||||||| ||||||||  ||||||||||||| ||||||||||||    
T  37195081 atattttagattcactcaattaatgatgtatatggtctttattatagaccacatacatcat 37195141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 13304491 - 13304550
Alignment:
Q  31 taaaaatttatattttagattcattcaattaataatgtatataatctttattatagatca 90  Q
    |||||||||||||||||||||| |||||||  | ||||||||||||||||||||| ||||    
T  13304491 taaaaatttatattttagattctttcaattttttatgtatataatctttattatatatca 13304550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 15119911 - 15119828
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||| || |||||||||| ||||| ||||| ||||||||  ||||||||||||| ||||||||||||    
T  15119911 gtcactattataagcaaaaatctacattttagatttattcatttaatgatgtatattgtctttattatagaccacatacatcat 15119828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 19951590 - 19951499
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||||| | ||||||| |   ||||||  |||||||| ||||||||||||||| ||||||||  |||||||||||||||| ||||||    
T  19951590 tacatcattcaattactattataaacaaaaatcaatattttatattcattcaattaatgatgtatatgctctttattatagatcatatacat 19951499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 32218687 - 32218640
Alignment:
Q  40 atattttagattcattcaattaataatgtatataatctttattataga 87  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  32218687 atattttagattcattcaattaatgatgtatataatttttattataga 32218640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 40204447 - 40204532
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtat---ataatctttattatagatcacatacatcat 100  Q
    ||||||||| | | |||||| |||||| || ||||||||||||||| ||||||   || |||||||||||||||||||||||||||    
T  40204447 tcactattataagcaaaaatctatattatacattcattcaattaatgatgtatatgatgatctttattatagatcacatacatcat 40204532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 41805280 - 41805363
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| |||  |||||| ||||||||||||||| ||||||||| ||||||||||||| || |||||||||    
T  41805280 gtcactattataagcaaaattttgcattttaaattcattcaattaatgatgtatatagtctttattatagaccatatacatcat 41805363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 1961316 - 1961398
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | | ||||||||| ||||||||||  || ||||||| ||||||||  ||||||||||||| ||||||||||||    
T  1961316 tcactattataagcaaaaatttacattttagatttgtttaattaatgatgtatatggtctttattatagaccacatacatcat 1961398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 8740514 - 8740608
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||| |||||||||||| | | |||||| || |||||||||||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  8740514 tacaccatccagtcactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcat 8740608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 26003580 - 26003486
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||| |||||||| ||| | | |||||| || |||||||||||||||||||||| ||||||||  ||||||||||| |  |||||||||||    
T  26003580 tacaccatccagtcacttttataagcaaaaatctacattttagattcattcaattaatgatgtatatggtctttattatatactacatacatcat 26003486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 33555208 - 33555266
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||||||||||||||| ||||||||  ||||||| ||||||||||||||||||    
T  33555208 attttaaattcattcaattaatgatgtatatgctctttatcatagatcacatacatcat 33555266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 3714245 - 3714302
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| || ||||||||||| ||||||||||||||    
T  3714245 ttttagatacattcaattaattatgtatgtagtctttattatatatcacatacatcat 3714302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 37396236 - 37396293
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||||||| |||||||| || | ||||||||| ||||||||||||    
T  37396236 ttttagattcattcaattaatgatgtatatgatttatattatagaccacatacatcat 37396293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 19612962 - 19613030
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||||||||||||||||||| ||||| ||| | ||| | ||||||||||| ||||||||||||    
T  19612962 aaaaatctatattttagattcattcatttaatgatgcacatagtttttattatagaccacatacatcat 19613030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 32460747 - 32460831
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaatt-aataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | ||||||||| |||||||||| |||  ||| ||| |||||||| |||||||||||||| ||||||||||||    
T  32460747 gtcactattataagcaaaaatttacattttagattaattttatttaatgatgtatattatctttattatagaacacatacatcat 32460831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 32630427 - 32630495
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| || ||||| |||||||||||||||| ||||||||  |||||||||||||  |||||||||||    
T  32630427 aaaaatctacattttggattcattcaattaatgatgtatatggtctttattatagactacatacatcat 32630495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 37182837 - 37182905
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| |||||||||||||| | | ||| |||||||||  |||||||||||| ||||||||||||    
T  37182837 aaaaatttacattttagattcattaattaaatgatgtatatagcctttattatagaccacatacatcat 37182905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 2050084 - 2050179
Alignment:
Q  5 ttacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| |  ||||||||| | | |||| ||| ||||||||||| ||| | ||||| |||||||| |||||||||||| | ||||||||||||    
T  2050084 ttacatcatccgatcactattataagcaaaactttttattttagatttatttatttaatgatgtatatgatctttattataaaccacatacatcat 2050179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 7079504 - 7079421
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||  ||||||||||||||||| ||||||| ||||||||  |||| |||||||| |||||| |||||    
T  7079504 gtcactattataagcaaaaacatatattttagattcatttaattaatgatgtatatggtcttaattatagaccacatatatcat 7079421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 11093632 - 11093581
Alignment:
Q  49 attcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||    
T  11093632 attcatttaattaattatgtatatagtctttattatagaccacatacatcat 11093581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 11342103 - 11342028
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacat 93  Q
    ||||||||| | | |||||| ||||||||||||||||| ||||||| |||||||| || ||||||| | |||||||    
T  11342103 tcactattataagcaaaaatctatattttagattcatttaattaatgatgtatatgatttttattaaaaatcacat 11342028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 26234158 - 26234075
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| |||| |||||||||||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  26234158 gtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcat 26234075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 42955059 - 42955122
Alignment:
Q  37 tttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| ||||||||||||||||||||| | |||||| |||| |||||| ||||| |||||||||    
T  42955059 tttattttttagattcattcaattaattacgtatatgatctatattatggatcatatacatcat 42955122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 5762533 - 5762583
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacat 93  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||| ||||    
T  5762533 ttttaaattcattcaattaatgatgtatatgatctttattatagattacat 5762583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 11153236 - 11153294
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||| |||||| |   |||||||||||| ||||||||||||    
T  11153236 attttagattcattcaattaatgatgtatgtgggctttattatagaccacatacatcat 11153294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 40320032 - 40319966
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttatta 83  Q
    |||||||||||| |||||| || ||||||||| |||||||| | |||||||||| |||||| |||||    
T  40320032 gtcactattacaagtaaaatttaatattttaggttcattcagtaaataatgtatgtaatctatatta 40319966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 38581009 - 38581081
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatata--atctttattataga 87  Q
    |||| ||||| | |||||||| ||||||||| |||||||||||||||| ||||||||   |||||||||||||    
T  38581009 gtcattattataagtaaaaatctatattttatattcattcaattaatattgtatatatggtctttattataga 38581081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 3121556 - 3121476
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||||| | | |||||| || ||||||||| |||||||||||  | ||||||  | |||||||||||||||||||||    
T  3121556 gtcactattataagcaaaaatctacattttagatccattcaattaaatacgtatattgtttttattatagatcacatacat 3121476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 3887854 - 3887922
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||| |||||||| |||||||||||| || ||| || |||||||||||  |||||||||||||    
T  3887854 aaaaatctattttttagatacattcaattaatgatttatgtagtctttattatatgtcacatacatcat 3887922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 7667679 - 7667611
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| ||||||||||||  |||||||| |||||||| |||| ||||||  | ||||||||||||    
T  7667679 aaaaatttacattttagattcaagcaattaatcatgtatattatctctattatgaaccacatacatcat 7667611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 10602428 - 10602348
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||||| | | |||||| || | ||||  |||||||||||||| ||||||||  ||||||||||||| |||||||||    
T  10602428 gtcactattataagaaaaaatatacaatttaagttcattcaattaatgatgtatatggtctttattatagaccacatacat 10602348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 12242351 - 12242291
Alignment:
Q  40 atattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||| | ||| |||||| || |||||||| ||||| |||||||||||    
T  12242351 atattttagattcattcattaaatgatgtatgtagtctttattgtagataacatacatcat 12242291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 27331893 - 27331825
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattata 85  Q
    |||||||||| | | ||||||  | |||||||||||||||||||||| |||||| || |||||||||||    
T  27331893 gtcactattataagcaaaaatcaacattttagattcattcaattaatgatgtatgtagtctttattata 27331825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 32143525 - 32143457
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| |||| |||||| ||||||||||||||| | ||||||| ||||||| ||| | ||||||||||||    
T  32143525 aaaactttacattttaaattcattcaattaatgaagtatatagtctttatcataaaccacatacatcat 32143457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 36547362 - 36547430
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| | |||||| ||||||| ||| ||| |||||| | ||||||| |||||||||||||||||||    
T  36547362 aaaaattgacattttaaattcatttaataaatgatgtatgtgatctttaatatagatcacatacatcat 36547430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 9431307 - 9431248
Alignment:
Q  41 tattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||| ||||| ||| | ||| ||||||||||||| ||||||||||||    
T  9431307 tattttaggttcattcatttaatgatgcacatagtctttattatagaccacatacatcat 9431248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 15916861 - 15916787
Alignment:
Q  22 tattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||| | |||||||| |||| |||||| ||||||||||| |||||||| |||||| |||||||  ||||||||    
T  15916861 tattacaagcaaaaattt-tattatagatttattcaattaatgatgtatatgatctttgttatagactacatacat 15916787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 31211242 - 31211285
Alignment:
Q  40 atattttagattcattcaattaataatgtatataatctttatta 83  Q
    ||||||||||||||||||||||||||||||| | |||| |||||    
T  31211242 atattttagattcattcaattaataatgtatctgatctatatta 31211285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 35024439 - 35024392
Alignment:
Q  50 ttcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||| ||||| ||||||||||||| ||||||||| |||||||||    
T  35024439 ttcattcagttaatgatgtatataatctatattatagaccacatacat 35024392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 20504275 - 20504317
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattata 85  Q
    ||||||||  ||||||||||| |||||||||||||||||||||    
T  20504275 ttttagatatattcaattaatgatgtatataatctttattata 20504317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 31024280 - 31024222
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| | ||| ||||||||  |||||||||| || ||||||||||||    
T  31024280 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcat 31024222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 31101980 - 31102038
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||  ||||| || ||||| |||||||||||| | ||||||||||||    
T  31101980 attttagattcattcggttaatgatatatatgatctttattataaaccacatacatcat 31102038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 31175107 - 31175153
Alignment:
Q  37 tttatattttagattcattcaattaataatgtatataatctttatta 83  Q
    ||||||||||||||||||||||||||| |||||| | |||| |||||    
T  31175107 tttatattttagattcattcaattaatgatgtatctgatctatatta 31175153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 604883 - 604916
Alignment:
Q  37 tttatattttagattcattcaattaataatgtat 70  Q
    ||||| ||||||||||||||||||||||||||||    
T  604883 tttattttttagattcattcaattaataatgtat 604916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 18731378 - 18731322
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||| |||||||||| || ||| ||  ||||||||||||||||||    
T  18731378 ttttagattcattcaataaataatgtatgtagtctata-catagatcacatacatcat 18731322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 26269407 - 26269374
Alignment:
Q  37 tttatattttagattcattcaattaataatgtat 70  Q
    ||||||||||||||||||| ||||||||||||||    
T  26269407 tttatattttagattcatttaattaataatgtat 26269374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 32226684 - 32226643
Alignment:
Q  46 tagattcattcaattaataatgtatataatctttattataga 87  Q
    |||||||||||||||||| ||||||||| | |||||||||||    
T  32226684 tagattcattcaattaatgatgtatatagtttttattataga 32226643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 35438639 - 35438691
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattataga 87  Q
    |||||| |||||||||||||||||||||   ||||||||||  |||||||||||||    
T  35438639 aaaaatctatattttagattcattcaat---taatgtatatggtctttattataga 35438691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 41824253 - 41824349
Alignment:
Q  3 aattacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| |||| || ||||||||| | | ||||||| || ||||||||||||||||| ||| |||||| || | | || |||||| ||||||||||||    
T  41824253 aattacttcatccaatcactattataagcaaaaattcattttttagattcattcaataaattatgtatgtagtttata-tatagaccacatacatcat 41824349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 3124022 - 3123954
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| || ||||||||||||||||| ||| |||||| ||  ||||||| ||||  |||||||||||    
T  3124022 aaaaattcatgttttagattcattcaataaatgatgtatgtagactttattgtagacaacatacatcat 3123954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 5528869 - 5528909
Alignment:
Q  30 gtaaaaatttatattttagattcattcaattaataatgtat 70  Q
    ||||||| |||||||||| ||||||| ||||||||||||||    
T  5528869 gtaaaaaattatattttaaattcattgaattaataatgtat 5528909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 21183360 - 21183416
Alignment:
Q  44 tttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| |||| |||||||||||||| || || |||||||| |||| ||||||||||||    
T  21183360 tttacattccttcaattaataatgcatgtagtctttattgtagaccacatacatcat 21183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 30902392 - 30902324
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||  |||||||| |||||||||||| || ||| |  |||||||||||  |||||||||||||    
T  30902392 aaaaatttactttttagatacattcaattaatgatatatgtggtctttattatatgtcacatacatcat 30902324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 43732159 - 43732227
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| || |||||||||||||||||||||| ||| ||||  || |||| ||| | ||||||||||||    
T  43732159 aaaaatatacattttagattcattcaattaatgatgaatatggtcattatcatataccacatacatcat 43732227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 29389333 - 29389414
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatc 98  Q
    |||||||||| | | ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  29389333 gtcactattataagcaaaaatttatattttagattcgttcaattaatgatgtatatgatctttattatagatcacatacatc 29389414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 10872806 - 10872723
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||    
T  10872806 gtcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattataaatcacatacatcat 10872723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 26243710 - 26243768
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  26243710 attttagattcattcaattaataatgtatatcatctttattatagaccacatacatcat 26243768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 50466808 - 50466901
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||  ||| ||||| | |||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||| |||||| |||||    
T  50466808 tacatcattcgatcattattataagtaaaaatttatattttagattcattcaattaatgatgtatatgatcttta-tatagaccacatatatcat 50466901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 35987550 - 35987485
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||| ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  35987550 aaaattttatattttagatttattcaattaataatgtatatgttctttattatagatcacatacat 35987485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 51060684 - 51060752
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  51060684 aaaaatttacattttagattaattcaattaataatgtatatgatctttattatatatcacgtacatcat 51060752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 331932 - 331849
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | ||||||| | |||||||||||||||| | ||| ||||||||||||||||||||||| ||||||||||||    
T  331932 gtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatataatctttattatagaccacatacatcat 331849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 12744907 - 12744990
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | ||||| ||| |||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||    
T  12744907 gtcactattataagcaaaaacttacattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcat 12744990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 52215886 - 52215969
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | ||||||||| ||||||||||||| ||||| || |||||||| |||||||||||||| ||||||||||||    
T  52215886 gtcactattataagcaaaaatttacattttagattcatgcaattgatgatgtatatgatctttattatagaccacatacatcat 52215969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 45736820 - 45736738
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | | |||| ||||||||||| ||||||||||||||| ||||| || |||||||||||||| ||||||||||||    
T  45736820 tcactattataagcaaaattttatattttaaattcattcaattaatgatgtacatgatctttattatagaccacatacatcat 45736738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 37897703 - 37897768
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||| || |||||||||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  37897703 aaaaatctaaattttagattcattcaattaatgatgtatatgatctttattatagaccacatacat 37897768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 52866536 - 52866468
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| | |||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||    
T  52866536 aaaaattaacattttagattcattcattaaataatatatataatctttattatagaccacatacatcat 52866468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 26121570 - 26121628
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||    
T  26121570 attttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcat 26121628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 26244412 - 26244469
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||    
T  26244412 ttttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcat 26244469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 3074897 - 3074829
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| |||||||||||||||| ||||| ||| | || ||||||||| |||||||||||||||||    
T  3074897 aaaaatttacattttagattcattcatttaatgatgcacatgatctttattgtagatcacatacatcat 3074829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 22497070 - 22497002
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| |||| |||||||||||||||||||||||| ||||||  ||||||| ||||| ||||||||||||    
T  22497070 aaaactttacattttagattcattcaattaataacgtatattgtctttatcatagaccacatacatcat 22497002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 24722806 - 24722738
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| |||| |||||||||||| ||||||||||||||||||  | ||||||||||| ||||||||||||    
T  24722806 aaaactttacattttagattcactcaattaataatgtatattgtatttattatagaccacatacatcat 24722738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 47334663 - 47334731
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||| ||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||||    
T  47334663 aaaactttgtattttaaattcattcaattaatgatgtatatgatttttattatagatcatatacatcat 47334731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 51253789 - 51253721
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| ||||| |||||||||||||| |||||||||||| | ||||||||||||  |||||||||||    
T  51253789 aaaaattaatattgtagattcattcaatcaataatgtatatgaactttattatagacaacatacatcat 51253721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 3020724 - 3020665
Alignment:
Q  41 tattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||| |||| |||||||||    
T  3020724 tattttggattcattcaattaatgatgtatatagtctttattatatatcatatacatcat 3020665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 14756414 - 14756497
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||||| | |||||| |||| |||||||||| ||||| ||||| ||||||||  ||||||||||||| ||||||||||||    
T  14756414 gtcaatattataagtaaaattttacattttagatttattcatttaatgatgtatatggtctttattatagaccacatacatcat 14756497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 29222913 - 29222854
Alignment:
Q  41 tattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||||||  |||||||||||    
T  29222913 tattttaaatttattcaattaataatgtatatgatctttattatagacaacatacatcat 29222854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 29752189 - 29752271
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||  |||||| ||| |||||||||||||||||||||| | ||||||  || |||||||||| ||||||||||||    
T  29752189 gtcactattacaaataaaaaattacattttagattcattcaattaatta-gtatatggtccttattatagagcacatacatcat 29752271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 41743724 - 41743641
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | |||||| |||| ||||| |||||||||| ||||| ||||||||  ||||||||||||| || |||||||||    
T  41743724 gtcactattataagtaaaagtttacattttggattcattcagttaatgatgtatatggtctttattatagaccatatacatcat 41743641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 3648832 - 3648750
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | | |||| ||||||||||| ||||||||||| ||| ||||||||| |||||||||||||  | |||||||||    
T  3648832 tcactattataagcaaaactttatattttacattcattcaatcaatgatgtatatagtctttattatagacaatatacatcat 3648750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 27224689 - 27224631
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| ||||| | ||| ||||||||||| ||||||||||||||||||||||||    
T  27224689 attttagattgattcattaaatgatgtatataatttttattatagatcacatacatcat 27224631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 50745086 - 50745017
Alignment:
Q  31 taaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| |||||| |||| || ||||||| ||||||||| | ||||||||| ||||||||||||||    
T  50745086 taaaaatttacattttatattcgtttaattaatgatgtatatagtatttattataaatcacatacatcat 50745017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 785952 - 786040
Alignment:
Q  3 aattacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcac 91  Q
    ||||||||| |||||| ||||||| | || |||||||||||||| ||||| |||| |||||||| ||||| |  ||||||||| |||||    
T  785952 aattacatccttcagttactattataagttaaaatttatatttttgattcgttcatttaataatatatatgaattttattatacatcac 786040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 4980392 - 4980324
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| |||||||||||||||||||| ||| |||||| || |||||||||||||  ||||| |||||    
T  4980392 aaaaattcatattttagattcattcaataaatgatgtatgtagtctttattatagacaacatatatcat 4980324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 8439377 - 8439309
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| ||||||||||| |||||||| ||||| ||| | ||| ||||||||||||| ||||||||||||    
T  8439377 aaaaaattatattttaggttcattcatttaatgatgcacatagtctttattatagaccacatacatcat 8439309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 6124204 - 6124121
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||||| | ||||||||  |||||| || |||||| ||||||||||||||||| ||||| ||||| |||| |||||||||    
T  6124204 gtcattattataagtaaaaatcaatatttgaggttcattaaattaataatgtatatagtcttttttatacatcatatacatcat 6124121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 38677571 - 38677654
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| |||| |||||||||||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  38677571 gtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcat 38677654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 43599192 - 43599149
Alignment:
Q  57 aattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| |||||||| |||||||||||||||||||||||||||    
T  43599192 aattaatgatgtatattatctttattatagatcacatacatcat 43599149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 54595923 - 54595841
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | |||||||| || |||||||||||||||| | ||| ||||||||  |||||||||| || ||||||||||||    
T  54595923 gtcactattataagtaaaaatata-attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcat 54595841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 24597010 - 24596944
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatc 98  Q
    ||||||| ||||||||  |||||| ||| |||||||||||||||||  |||||| ||||||||||||    
T  24597010 aaaaattcatattttaagttcattgaataaataatgtatataatctacattataaatcacatacatc 24596944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 35237704 - 35237769
Alignment:
Q  37 tttatattttagattcattcaattaataatgtatataatctttat--tatagatcacatacatcat 100  Q
    |||||||||||||| |||| ||||||| ||||||||  |||||||  |||||||||||||||||||    
T  35237704 tttatattttagatccatttaattaatgatgtatatggtctttattatatagatcacatacatcat 35237769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 4182039 - 4181982
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| ||||||| ||| |||||||| |||| ||||||||| ||||||||||||    
T  4182039 ttttagatttattcaatcaatgatgtatatgatctatattatagaccacatacatcat 4181982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 27102215 - 27102158
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||| |||||||||| |  ||| ||||||||| ||||||||||||    
T  27102215 ttttagattcattcaataaataatgtatgtgttctatattatagaccacatacatcat 27102158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 51165907 - 51165850
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| || ||||||||||||||| ||||| |||| ||||||||| ||||||||||||    
T  51165907 ttttaaatgcattcaattaataatttatatgatctatattatagaccacatacatcat 51165850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 29512250 - 29512182
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| |||||||| |||| ||||||| |||||| |  |||||||||||  |||||||||||||    
T  29512250 aaaaatttattttttagatacatttaattaatgatgtatgtggtctttattatatgtcacatacatcat 29512182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 8504856 - 8504939
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||| || |||||||||||||||| ||| | ||| | ||  ||||||||||||| ||||||||||||    
T  8504856 gtcactattataagcaaaaatctacattttagattcattcatttattgatgcacatggtctttattatagaccacatacatcat 8504939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 30578356 - 30578273
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| ||| ||||||||||||||||| | ||| ||||||| | |||||||||| || || |||||||||    
T  30578356 gtcactattataagcaaaactttgtattttagattcattcattaaatgatgtatacagtctttattattgaccatatacatcat 30578273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 36344507 - 36344424
Alignment:
Q  18 tcactattacacgtaaaaattta-tattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | ||||||||||  ||||||||||||||||| | ||| |||||| |  |||||||||| ||||||||| |||||    
T  36344507 tcactattataagtaaaaattttgtattttagattcattcattaaatgatgtatgtggtctttattattgatcacatatatcat 36344424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 21404005 - 21403947
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| |||||||||||| |||||| |  |||||||||||  |||||||||||||    
T  21404005 attttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcat 21403947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 40504167 - 40504117
Alignment:
Q  50 ttcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||||||| | || | |||||| |||||||||||||||    
T  40504167 ttcattcaattaataatgtatgtgatttatattatggatcacatacatcat 40504117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 40760793 - 40760859
Alignment:
Q  33 aaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatca 99  Q
    |||||| || |||||| ||||||||||||||||||||| || |   |||||| ||||||||||||||    
T  40760793 aaaattgattttttaggttcattcaattaataatgtatgtagttcatattatggatcacatacatca 40760859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 52638064 - 52638122
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| ||||||||||||||||||||| | || | |||||| || ||||||||||||    
T  52638064 attttaggttcattcaattaataatgtatgtgatttatattatcgaccacatacatcat 52638122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 336061 - 336118
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaat 63  Q
    |||| ||||| |||||||||| | |||||| |||| |||||||||||||||| |||||    
T  336061 tacaccattcggtcactattataagtaaaagtttacattttagattcattcatttaat 336118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 9492697 - 9492762
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||| |||||||||| ||| ||||||| |||||| |  |||||||||||||  ||||||||    
T  9492697 aaaaatttacattttagatttatttaattaattatgtatgtggtctttattatagacgacatacat 9492762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 23444392 - 23444327
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||| | |||||||||||||||| | ||| ||||||||| ||||||||||  | |||||||||    
T  23444392 aaaaattaacattttagattcattcattaaatgatgtatatagtctttattattaaccacatacat 23444327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 33412497 - 33412554
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| | ||||  ||| |||||||||||||||||    
T  33412497 ttttagatacattcaattaatgatgtatgtgatctaaattttagatcacatacatcat 33412554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 41349768 - 41349711
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| |  |||||||||||  |||||||||||||    
T  41349768 ttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcat 41349711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 42449137 - 42449194
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| | ||||||||||||  |||||| ||||||    
T  42449137 ttttagatacattcaattaatgatgtatgtgatctttattatatgtcacattcatcat 42449194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 49412312 - 49412361
Alignment:
Q  38 ttatattttagattcattcaattaataatgtatataatctttattataga 87  Q
    ||||||||||  || ||||||||||| ||||| |||||||||||||||||    
T  49412312 ttatattttaagtttattcaattaatgatgtacataatctttattataga 49412361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 40065424 - 40065372
Alignment:
Q  48 gattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| ||||||||  ||||||||||| |  |||||||||||    
T  40065424 gattcattcaattaatgatgtatatggtctttattatatactacatacatcat 40065372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 52931674 - 52931730
Alignment:
Q  44 tttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| |||||||||||| |||||| |  |||||||||||  |||||||||||||    
T  52931674 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcat 52931730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 34954029 - 34953947
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | | |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||    
T  34954029 tcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcat 34953947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 48083640 - 48083555
Alignment:
Q  15 cagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| || | | |||| ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||    
T  48083640 cagtcactaatataagcaaaactttatattttagattcattcaattaataacgtatatgatctttattatagaccacatacatcat 48083555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 50503206 - 50503272
Alignment:
Q  34 aaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  50503206 aaatttatattttagatttattcaattaatgatgtatatgatctttattatagaccacatacatcat 50503272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 9590878 - 9590798
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||||||||||||  ||| ||||||| ||||||||||||||| |||||||| |||||||||||| | |||||||||    
T  9590878 gtcactattacacgtaaacctttctattttaaattcattcaattaatgatgtatatgatctttattatataccacatacat 9590798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 50550157 - 50550208
Alignment:
Q  49 attcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  50550157 attcattcaattaataatgtatatgatctttattatagatcacatacatcat 50550208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 31998298 - 31998240
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  31998298 attttagattcattcatttaatgatgtatatgatctttattatagatcacatacatcat 31998240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 13043474 - 13043413
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctt 78  Q
    |||||||||| | ||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  13043474 gtcactattataagtaaaaattaatattttagattcattcaattaatgatgtatataatctt 13043413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 33765793 - 33765876
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| |||| | |||||||||||||||||| |||| || ||||||| ||||||||  ||||||||||||| ||||||||||||    
T  33765793 gtcacgattataagtaaaaatttatattttaaattcgtttaattaatgatgtatatggtctttattatagaccacatacatcat 33765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 26344227 - 26344309
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | | |||||| ||||||||| ||| ||| ||||||||||||||||| ||||||||||||| || |||||||||    
T  26344227 tcactattataagaaaaaatatatattttaaatttatttaattaataatgtatatagtctttattatagaacatatacatcat 26344309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 3549778 - 3549865
Alignment:
Q  10 tcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||| ||||||| | | |||||| || |||||||||||||||||||||| || ||||   ||||||||||||| |||||||||    
T  3549778 tcattcagttactattataagcaaaaatctacattttagattcattcaattaatgatatatacggtctttattatagaccacatacat 3549865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 5595541 - 5595474
Alignment:
Q  30 gtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||| || |||||||||||||||||||| |||| |||||  ||||||||||| |||||||||||    
T  5595541 gtaaaaatctacattttagattcattcaattagtaatatatatggtctttattatatatcacatacat 5595474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 8338681 - 8338764
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||| || |||||||||||||||| ||||| ||| | || |||||||||||||| ||||||||||||    
T  8338681 gtcactattataagcaaaaatctacattttagattcattcatttaatgatgcacatgatctttattatagaccacatacatcat 8338764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 13877119 - 13877036
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||| | |||||| |||| |||||||||| |||||||  ||||||||||| |||||||||||| |||| |||||||||    
T  13877119 gtcactcttataagtaaaattttacattttagatttattcaatctataatgtatatgatctttattatatatcatatacatcat 13877036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 23575452 - 23575369
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| || | ||||||| ||| ||||||| |||||||| ||||| ||| |||| |||||||||||||| ||||||||||||    
T  23575452 gtcactaatataagtaaaaaattacattttaggttcattcatttaatgatgcatatgatctttattatagaccacatacatcat 23575369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 40988368 - 40988450
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatca 99  Q
    |||||||||| | |||| |||  |||||||| | | ||||||||||| |||||||| ||||||||||||||||| ||||||||    
T  40988368 gtcactattataagtaataatcaatattttacaattattcaattaatgatgtatatgatctttattatagatcagatacatca 40988450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 50154337 - 50154395
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||| |||||||||||||||| ||  ||||||||||||||||| |||||    
T  50154337 attttagattcatttaattaataatgtatatgattattattatagatcacatatatcat 50154395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 11324553 - 11324484
Alignment:
Q  31 taaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| | |||||| ||||||||||||||| ||||||||  |||||||||||||  |||||||||||    
T  11324553 taaaaattaacattttaaattcattcaattaatgatgtatatggtctttattatagactacatacatcat 11324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 11482574 - 11482505
Alignment:
Q  31 taaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| | |||||| ||||||||||||||| ||||||||  |||||||||||||  |||||||||||    
T  11482574 taaaaattaacattttaaattcattcaattaatgatgtatatggtctttattatagactacatacatcat 11482505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 18353681 - 18353632
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcac 91  Q
    |||||||||||||||||||||| || |||||| |||||||||||||||||    
T  18353681 attttagattcattcaattaatgatatatatagtctttattatagatcac 18353632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 18607204 - 18607151
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattata 85  Q
    |||||| ||||||||| |||||||||||||||||| |||||||| |||||||||    
T  18607204 aaaaatctatattttaaattcattcaattaataatatatataatttttattata 18607151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 2492595 - 2492527
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| |||| ||||||||| |||||||| ||| |||||||| |||||||||||| | ||||||||||||    
T  2492595 aaaagtttacattttagatccattcaataaatgatgtatatgatctttattataaaccacatacatcat 2492527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 13048678 - 13048722
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatc 76  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||    
T  13048678 aaaaattaatattttagattcattcaattaatgatgtatataatc 13048722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 13053675 - 13053719
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatc 76  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||    
T  13053675 aaaaattaatattttagattcattcaattaatgatgtatataatc 13053719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 42761474 - 42761542
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| |||| |||||||||||||||||||||| |||||| | ||||||||||||||  | |||||||||    
T  42761474 aaaactttacattttagattcattcaattaatgatgtatctgatctttattatagactatatacatcat 42761542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 44349951 - 44350019
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||||||||||||||||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  44349951 aaaagtttatattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcat 44350019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 6508404 - 6508483
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||| | | ||||||||| || ||||||||||||| ||||| ||| | || |||||||||||||| |||||||||    
T  6508404 tcactattataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacatacat 6508483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 6758552 - 6758635
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| |||  |||||| ||||||||||||||| ||||||||| |||||||||||||  || ||||||||    
T  6758552 gtcactattataagcaaaactttgcattttacattcattcaattaatgatgtatatagtctttattatagacaacgtacatcat 6758635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 8397088 - 8397041
Alignment:
Q  53 attcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||    
T  8397088 attcaattaatgatatatataatctttattatagatcacatatatcat 8397041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 14891872 - 14891789
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | ||||||||| |||||||||| || |||| ||| ||||||||  ||||||||||||| || |||||||||    
T  14891872 gtcactattataagcaaaaatttaaattttagatttatccaataaatgatgtatatggtctttattatagaccatatacatcat 14891789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 26674295 - 26674240
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||| ||||||||||||||| ||||||||  ||||||||||||| |||||||||    
T  26674295 attttaaattcattcaattaatgatgtatatggtctttattatagaccacatacat 26674240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 33939431 - 33939348
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| |||| |||||||||||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  33939431 gtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcat 33939348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 39216205 - 39216154
Alignment:
Q  49 attcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||| ||||||||| |||||||||||||  |||||||||||    
T  39216205 attcattcaattaatgatgtatatagtctttattatagacaacatacatcat 39216154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 37589625 - 37589687
Alignment:
Q  39 tatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcatc 101  Q
    ||||||||||||||||| |||||||||| |||||  ||||| ||||||| || ||||||||||    
T  37589625 tatattttagattcatttaattaataatttatattgtctttgttatagaccatatacatcatc 37589687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 42629620 - 42629674
Alignment:
Q  46 tagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| ||||| ||||||||||||||| ||||||||| ||||||| ||||    
T  42629620 tagattcattgaattattaatgtatataatctatattatagaccacatacgtcat 42629674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 43728189 - 43728275
Alignment:
Q  14 tcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||| |   |||||| |||||||||| || ||| ||||||| || |||||||||||||||||| | |||| |||||||    
T  43728189 tcagtcactattataaacaaaaatctatattttaggttaatttaattaatgatatatataatctttattataaaccacacacatcat 43728275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 46412821 - 46412767
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatat 72  Q
    ||||||||| | ||||||||||| ||||| |||||||||||||||| ||||||||    
T  46412821 tcactattataagtaaaaatttacattttggattcattcaattaatgatgtatat 46412767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 47969506 - 47969568
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacata 94  Q
    ||||| ||||||||||||||| || ||||||| |||||||| || ||||||||||| ||||||    
T  47969506 aaaaaattatattttagattcgtttaattaatgatgtatatgatatttattatagaccacata 47969568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 36486560 - 36486628
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| ||||||||||||||  || ||| ||||||| ||||||||||||| | || |||||||||    
T  36486560 aaaaatttagattttagattcatttgatcaatgatgtatacaatctttattataaaccatatacatcat 36486628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 39940619 - 39940567
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtat 70  Q
    ||||||||| | |||||||||||  ||||||||||||||||| ||||||||||    
T  39940619 tcactattataagtaaaaatttactttttagattcattcaataaataatgtat 39940567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 45010833 - 45010925
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatc 98  Q
    |||||||| | |||||||||| | | |||| |||  |||||| ||||||||||||||| |||||||| || ||||||||| | || |||||||    
T  45010833 tacatcatccggtcactattataagcaaaattttgcattttaaattcattcaattaatgatgtatatgatatttattataaaccatatacatc 45010925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 3013616 - 3013699
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | ||||| |||||||||||||| |||||||||||  ||||| |  ||||||||||| || | |||||||||    
T  3013616 gtcactattataagcaaaaaattatattttagatttattcaattaatgttgtatgtggtctttattataaataatatacatcat 3013699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 8465956 - 8466015
Alignment:
Q  41 tattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||| | ||||| |||||| |  ||||||||||||| ||||||||||||    
T  8465956 tattttagattcatttatttaatgatgtatgtggtctttattatagaccacatacatcat 8466015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 38468712 - 38468775
Alignment:
Q  37 tttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| ||||||||||||||||| |||||||||| |  |||||||| ||||  |||||||||||    
T  38468712 tttatgttttagattcattcaataaataatgtatgtggtctttattgtagacaacatacatcat 38468775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 39362851 - 39362898
Alignment:
Q  53 attcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||| |||||||| |||||||||||||| ||||||| ||||    
T  39362851 attcaattaatgatgtatatgatctttattatagaccacatacttcat 39362898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 45115304 - 45115221
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||| || |||||||||||||||| ||||| ||| | ||  ||||||||||||| |||||| |||||    
T  45115304 gtcactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacatatatcat 45115221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 45639547 - 45639594
Alignment:
Q  49 attcattcaattaataatgtatataatctttattatagatcacataca 96  Q
    ||||||| ||||||| |||||||| |||||||||||||| ||||||||    
T  45639547 attcattaaattaatgatgtatatgatctttattatagaccacataca 45639594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 14967334 - 14967276
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| | ||| |||||| | |||||||||||||  ||||||||||||    
T  14967334 attttagattcattcattaaatgatgtatgtgatctttattataggccacatacatcat 14967276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 36040255 - 36040197
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| |||||||| ||||| ||| | ||| ||||||||||||| ||||||||||||    
T  36040255 attttaggttcattcatttaatgatgcacatagtctttattatagaccacatacatcat 36040197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 41007786 - 41007728
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| | ||| |||||| |  ||||||||||||| ||||||||||||    
T  41007786 attttagattcattcattaaatgatgtatgtggtctttattatagaccacatacatcat 41007728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 2349864 - 2349807
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| || |||||||||||  |||||| ||||||    
T  2349864 ttttagatacattcaattaatgatgtatgtagtctttattatatgtcacatgcatcat 2349807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 3384331 - 3384274
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| ||||||||| || |||||| | ||||||||||||  |||||||||||||    
T  3384331 ttttagatacattcaattgatgatgtatgtgatctttattatatgtcacatacatcat 3384274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 7461399 - 7461334
Alignment:
Q  20 actattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattata 85  Q
    ||||||| | |||||| ||| ||||||||||||||| ||||||| ||||| ||  |||||||||||    
T  7461399 actattataagtaaaactttgtattttagattcatttaattaatgatgtacattgtctttattata 7461334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 27206791 - 27206848
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| || |||||||||||  || ||||||||||    
T  27206791 ttttagatacattcaattaatgatgtatgtagtctttattatatgtcgcatacatcat 27206848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 34658494 - 34658437
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| || ||||||||||||||||||| |  |||||||||||  |||||||||||||    
T  34658494 ttttaaatacattcaattaataatgtatgtggtctttattatatgtcacatacatcat 34658437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 35050040 - 35049983
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| |||||||||||||| || ||||| || | || |||||||||||||||||||    
T  35050040 ttttagtttcattcaattaatgatatatatgatttataatatagatcacatacatcat 35049983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 8455074 - 8455126
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattat 84  Q
    |||||| || ||||||| |||||||||||||  || |||||||||||||||||    
T  8455074 aaaaatctacattttaggttcattcaattaacgatatatataatctttattat 8455126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 15351834 - 15351766
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||| ||||||||||||||||| ||| |||||| |  |||||||| ||||  |||||||||||    
T  15351834 aaaaatctatgttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcat 15351766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 31325838 - 31325886
Alignment:
Q  39 tatattttagattcattcaattaataatgtatataatctttattataga 87  Q
    ||||||||||||| |||||||||||||||||| |  |||||||| ||||    
T  31325838 tatattttagatttattcaattaataatgtatgtgttctttattgtaga 31325886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 31699008 - 31699072
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacataca 96  Q
    |||||| || ||| |||||||||||| ||||| ||| | || |||||||||||||| ||||||||    
T  31699008 aaaaatatacattgtagattcattcatttaatgatgcacatgatctttattatagagcacataca 31699072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 31889162 - 31889094
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||  ||||| ||||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  31889162 aaaaatttactttttacattcattcatttaatgatgcacatggtctttattatagaccacatacatcat 31889094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 38834617 - 38834673
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatata 73  Q
    |||||||||| | | |||||||||| ||||||||||||| ||| ||| |||||||||    
T  38834617 gtcactattataagcaaaaatttattttttagattcattaaataaatgatgtatata 38834673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 41161486 - 41161554
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| ||| ||||||  |||||||| ||||| ||| | || |||||||||||||| ||||||||||||    
T  41161486 aaaaaattacattttaagttcattcatttaatgatgcacatgatctttattatagaccacatacatcat 41161554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 50755296 - 50755228
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| || ||||||| |||||| ||||||| |||||||| |||||||||| | |  |||||||||||    
T  50755296 aaaaatctacattttaggttcatttaattaatgatgtatatgatctttattacatacaacatacatcat 50755228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 4708655 - 4708587
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||| ||||||||||||    
T  4708655 aaaaatttatattttaaattcatttaattaataatgtatatgatctttattatagaccacatacatcat 4708587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 18423913 - 18423981
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||| |||||||||    
T  18423913 aaaaatttatattttagattcattcaattaatgatgtatatgatctttattataaatcatatacatcat 18423981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 50686119 - 50686059
Alignment:
Q  37 tttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  50686119 tttatattttagattcattcaattaacgatgtatatgatctttattatagatcacatacat 50686059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 4406379 - 4406292
Alignment:
Q  13 ttcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| ||||| | | ||||||||||||||| |||||||||||||||| |||||| |  ||||||||||||| ||||||||||||    
T  4406379 ttcagtcattattataagcaaaaatttatattttggattcattcaattaatgatgtatgtggtctttattatagaccacatacatcat 4406292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 24448687 - 24448754
Alignment:
Q  33 aaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||| ||||||||||||||    
T  24448687 aaaatttatattttatattcatttaattaatgatgtatatagtctttattataaatcacatacatcat 24448754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 48603570 - 48603653
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | || ||| ||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  48603570 gtcactattataagcaagaatctatattttagatttattcaattaatgatgcatatgatctttattatagatcacatacatcat 48603653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 4484078 - 4484163
Alignment:
Q  15 cagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||||| | |||||| |||  |||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||    
T  4484078 cagtcattattataagtaaaactttgcattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcat 4484163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 3511730 - 3511798
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| |||| |||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||    
T  3511730 aaaactttacattttagattcattcaattaatgatgtatatgatctttattatagaccacattcatcat 3511798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 10572840 - 10572772
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| ||||||| |||||| ||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  10572840 aaaaacttatattatagatttattcaattaatgatgtatatgatctttattatagaccacatacatcat 10572772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 39533777 - 39533845
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| | |||||||||||||| | | ||| ||||||||||||||||||||||||||||||||||||    
T  39533777 aaaaattaacattttagattcatttattaaatgatgtatataatctttattatagatcacatacatcat 39533845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 40952467 - 40952399
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||||||||||||  |||||||| || ||||||||||| |||||| |||||    
T  40952467 aaaaatttatattttagattcattcaattaaatatgtatatgatttttattatagaccacatatatcat 40952399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 23071412 - 23071495
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| |||| | |||||||||||||||||||||||||||| ||||| ||| | || |||||||||||||| || |||||||||    
T  23071412 gtcacaattataagtaaaaatttatattttagattcattcatttaatgatgcacatgatctttattatagaccatatacatcat 23071495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 36786181 - 36786239
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| | ||||||||||||    
T  36786181 attttagattcattcaattaatgatgtatatagtctttattataaaccacatacatcat 36786239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 40881572 - 40881478
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| | |||||||||||| |  |||||||  | | |||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||    
T  40881572 tacatcttccagtcactattataattaaaaatcaacactttagattcattcaattaatgatgtatatgatctttattatatgtcacatacatcat 40881478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 53176453 - 53176359
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| | |||||||||||| | | |||||||||||||||||||||||||| |||||  ||||| | |||||| ||||| || |||||||||||    
T  53176453 tacatcctccagtcactattataagcaaaaatttatattttagattcattcagttaatgttgtatttgatcttttttataaataacatacatcat 53176359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 55416306 - 55416384
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||| ||||| | |||||||||||||||| ||||||||||||||||| ||||||||   |||||||||||| |||||||||    
T  55416306 gtcattattataagtaaaaatttatatttgagattcattcaattaatgatgtatat--gctttattatagaccacatacat 55416384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 5816560 - 5816628
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||| ||||||| ||||||| ||||||| |||||||| ||||||||||||||||||||| |||||    
T  5816560 aaaactttgtattttaaattcatttaattaatgatgtatatgatctttattatagatcacatatatcat 5816628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 8826992 - 8826916
Alignment:
Q  24 ttacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| |||||| |||  |||||||||||||| | ||||| ||||||||  ||||||||||||||||||||||||||    
T  8826992 ttacaagtaaaactttgcattttagattcatttatttaatgatgtatatggtctttattatagatcacatacatcat 8826916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 41346462 - 41346550
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacata 94  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||||| | ||||| ||| | ||  |||||||||||| |||||||    
T  41346462 tacaccattcggtcactattataagtaaaaatttatattttagattcatttatttaatgatgcacatggtctttattataggtcacata 41346550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 24331451 - 24331514
Alignment:
Q  37 tttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||||  | ||||||||||||    
T  24331451 tttattttttagattcattcaattaataatgtatgtaatctatattatgaaccacatacatcat 24331514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 24798133 - 24798216
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | ||||||||||| |||||| ||| ||||| |||||  ||||||| |||||||||||||| ||| ||||||||    
T  24798133 gtcactattataagtaaaaatttacattttatatttattcatttaatggtgtatatgatctttattatagaccacgtacatcat 24798216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 38298111 - 38298174
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatac 95  Q
    |||| ||||||||||||||||||||||||||| ||||||||  ||||||||||| | |||||||    
T  38298111 aaaattttatattttagattcattcaattaatgatgtatatggtctttattataaaccacatac 38298174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 46803427 - 46803494
Alignment:
Q  31 taaaaatt-tatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||| ||||||||||| | |||||||||    
T  46803427 taaaaattatatattttagattcattaaattaattatgtatatagtctttattataaaccacatacat 46803494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 6243744 - 6243682
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacata 94  Q
    ||||||||||  ||||||| |||||||||||| ||||||||||||||| ||||| ||||||||    
T  6243744 aaaaatttattatttagatacattcaattaatgatgtatataatcttttttatatatcacata 6243682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 7740609 - 7740547
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacata 94  Q
    |||||||||||||||| ||||||| ||||||| |||||| | ||||||||||||||| |||||    
T  7740609 aaaaatttatattttaaattcattaaattaatgatgtatgtgatctttattatagattacata 7740547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 14450964 - 14451046
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | | |||||| || |||||||||||||||| ||||| ||| | ||  ||||||||||||||||||||||||||    
T  14450964 tcactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagatcacatacatcat 14451046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 18626824 - 18626758
Alignment:
Q  34 aaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| |||||||||| ||||||||||| ||| |||| |||||||||||| | ||||||||||||    
T  18626824 aaatttacattttagatttattcaattaatgatgcatatgatctttattataaaccacatacatcat 18626758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 19878405 - 19878339
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatc 98  Q
    ||||||||| |||||| ||||||| ||||||| |||||||| |||||||||||||  ||||||||||    
T  19878405 aaaaatttacattttaaattcatttaattaatgatgtatatgatctttattatagtccacatacatc 19878339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 26920805 - 26920723
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | |||||| |||  |||||||||||||||||||||| ||||| ||  ||||||||||||| ||| ||||||||    
T  26920805 tcactattataagtaaaactttgcattttagattcattcaattaatgatgtacatcgtctttattatagaccacgtacatcat 26920723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 56328559 - 56328501
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| ||||| ||| ||||| ||||||||||||| ||||||||||||    
T  56328559 attttagattcattcatttaatgatgcatatagtctttattatagaccacatacatcat 56328501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 10308256 - 10308329
Alignment:
Q  32 aaaaatttatattttagattcattcaattaa-----taatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||||||||||||||||||||||||||     | ||||||||| ||||||||||||| ||||||||||||    
T  10308256 aaaactttatattttagattcattcaattaaattaatgatgtatatagtctttattatagaccacatacatcat 10308329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 13689644 - 13689587
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||||||||| |  |||||||||||  |||||||||||||    
T  13689644 ttttagattcattcaattaataatgtatgttgtctttattatatgtcacatacatcat 13689587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 33377547 - 33377486
Alignment:
Q  19 cactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatcttta 80  Q
    |||||||| | |||||| |||  |||||||||||||||||||||| ||||||||||||||||    
T  33377547 cactattataagtaaaattttgcattttagattcattcaattaatgatgtatataatcttta 33377486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 16170931 - 16170999
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| |||| ||||||||||||||||||||||  |||||||  |||||||||||||  |||||||||||    
T  16170931 aaaactttacattttagattcattcaattaatggtgtatatggtctttattatagactacatacatcat 16170999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 22493597 - 22493665
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||| | |||| |||||||| || ||||||||  ||||||||||||||||||||||||||    
T  22493597 aaaaatttgtattatggatttattcaattgatgatgtatatggtctttattatagatcacatacatcat 22493665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 35151667 - 35151727
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatct 77  Q
    |||||||||| | |||||| ||||||||||||||||||||| | |||||| ||||||||||    
T  35151667 gtcactattataagtaaaattttatattttagattcattcattaaataatatatataatct 35151727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 35151780 - 35151724
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagat 88  Q
    |||| ||| |||||||||||||||||||| || ||||||||| ||||||||||||||    
T  35151780 aaaactttgtattttagattcattcaattgatgatgtatatagtctttattatagat 35151724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 52914019 - 52914087
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| | ||||||||||||||||   ||| ||||||||| ||||||||||||| ||||||||||||    
T  52914019 aaaaattaacattttagattcattcatgaaatgatgtatatagtctttattatagaccacatacatcat 52914087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 54106594 - 54106526
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| ||||||||||||||||| ||| |||||| | ||||||||| ||||  |||||||||||    
T  54106594 aaaaatttatgttttagattcattcaataaatgatgtatgtgatctttattgtagacaacatacatcat 54106526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 2582942 - 2582859
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | ||||| ||| |||||||||||||||||| | ||| |||| ||| | ||||||||||||  |||||||||||    
T  2582942 gtcactattataagtaaatattaatattttagattcattcattaaattatgtttatgacctttattatagactacatacatcat 2582859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 12070114 - 12070047
Alignment:
Q  30 gtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||  ||||||||||||| ||| |||||||||| |||||||| |||||||||  ||||||||||    
T  12070114 gtaaaaaactatattttagatttatttaattaataatatatataatatttattatatgtcacatacat 12070047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 33694000 - 33694055
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||||| |||||||||| ||||||||  ||||||||||||| |||||||||    
T  33694000 attttagattcgttcaattaatgatgtatatggtctttattatagaccacatacat 33694055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 36072576 - 36072659
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| |||  ||||||||||||||||||| || ||||||||  |||||||||||||  |||||||||||    
T  36072576 gtcactattataagcaaaattttgcattttagattcattcaatttatgatgtatatggtctttattatagactacatacatcat 36072659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 40575948 - 40575893
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||||| |||||||||||||||||||| || ||||||||| |||| ||||||    
T  40575948 attttagatttattcaattaataatgtatatgatttttattatatatcatatacat 40575893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 49481886 - 49481969
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| |||| |||||||||||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  49481886 gtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcat 49481969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 54713104 - 54713187
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | ||||||||| |||||||||||||||| ||||| ||| | ||  |||||||| |||| ||||||||||||    
T  54713104 gtcactattataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattgtagaccacatacatcat 54713187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 3762178 - 3762232
Alignment:
Q  40 atattttagattcattcaattaataatgtatataatctttattatagatcacata 94  Q
    |||||||| ||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  3762178 atattttaaattcattcatttaataatatatatgatctttattatatatcacata 3762232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 21142209 - 21142156
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattata 85  Q
    |||| ||||||||||||||||||| ||||||| ||||||||  |||||||||||    
T  21142209 aaaagtttatattttagattcatttaattaatgatgtatatggtctttattata 21142156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 24275249 - 24275306
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||||||| ||||||||  |||  |||||||| ||||||||||||    
T  24275249 ttttagattcattcaattaattatgtatatggtctacattatagaccacatacatcat 24275306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 2865087 - 2865019
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| | |||||||||| ||||| | ||| ||||||||| | |||||||||||||| |||||||||    
T  2865087 aaaaattaacattttagattaattcattaaatgatgtatatagtttttattatagatcatatacatcat 2865019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 7215599 - 7215547
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattat 84  Q
    |||||||||||||||| |||| |||||||||| ||| |||| |||||||||||    
T  7215599 aaaaatttatattttaaattcgttcaattaatgatgcatatgatctttattat 7215547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 24133620 - 24133672
Alignment:
Q  33 aaaatttatattttagattcattcaattaataatgtatataatctttattata 85  Q
    ||||| ||||||||||||  ||||||||||| || ||||||||||||||||||    
T  24133620 aaaatctatattttagatatattcaattaatgatatatataatctttattata 24133672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 26636573 - 26636521
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtat 70  Q
    ||||||||| | |||||||||||| ||||||||||||||||| ||| ||||||    
T  26636573 tcactattataagtaaaaatttattttttagattcattcaataaatgatgtat 26636521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 40814698 - 40814758
Alignment:
Q  40 atattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||||| |||| || ||||| |||||||||||| | |||||| |||||    
T  40814698 atattttagattcattcaactaatgatatatatgatctttattataaaccacatatatcat 40814758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 48806403 - 48806307
Alignment:
Q  4 attacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||  ||||| |||| | ||||||||| | || ||||||||||||||| |||||| ||| |  |||||| |||||| | ||||||||||    
T  48806403 attacatcatttggtcaccattataagtaaaaattgacatcttagattcattcaataaataatatatgtggtctttaatatagaccgcatacatcat 48806307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 25138689 - 25138772
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| ||| |||| ||||||||| |||||||| ||||||||  ||||||||||||| ||| || |||||    
T  25138689 gtcactattataagcaaaactttgtattatagattcatgcaattaatgatgtatattgtctttattatagaccacgtatatcat 25138772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 31262728 - 31262645
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| || | ||||||||||||||| || ||| || ||| || |||||| |||||||||||||||||||    
T  31262728 gtcactattataagcaaaatttgacattttagattcattcgataaatgatatatgtagtctttaatatagatcacatacatcat 31262645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 46217871 - 46217820
Alignment:
Q  49 attcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||||||||||| || |||| ||||||| |||| |||||    
T  46217871 attcattcaattaataatgtatatagtcgttataatagatcgcatatatcat 46217820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 52817675 - 52817620
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatc 98  Q
    |||||||| |||||||||||| |||||| | ||||||||||||  |||||||||||    
T  52817675 ttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatc 52817620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 3669562 - 3669608
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaat 63  Q
    |||||||||| | | ||| ||||||||||||||||||||||||||||    
T  3669562 gtcactattataagcaaatatttatattttagattcattcaattaat 3669608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 25022619 - 25022569
Alignment:
Q  50 ttcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||||||| ||||||||  | ||||||||||||||||||||||||    
T  25022619 ttcatttaattaatgatgtatattgtgtttattatagatcacatacatcat 25022569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 35425273 - 35425327
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatag 86  Q
    |||| |||| |||||||||||||||| ||||| ||||||||  ||||||||||||    
T  35425273 aaaactttaaattttagattcattcatttaatgatgtatatggtctttattatag 35425327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 54508190 - 54508228
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtat 70  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  54508190 aaaaatttatattttagattcattcaataaatgatgtat 54508228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 54931957 - 54931899
Alignment:
Q  13 ttcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtata 71  Q
    |||||||| ||||||| ||||||||| | |||||||||||||||| | ||| |||||||    
T  54931957 ttcagtcattattacaagtaaaaattaacattttagattcattcattaaatgatgtata 54931899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 55936018 - 55936076
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| | ||| ||||||||  |||||||||| || ||||||||||||    
T  55936018 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcat 55936076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 5281269 - 5281192
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacata 94  Q
    ||||||| || | ||||||||| |  |||||||| |||||||||||| |||||| | ||||||||||||  |||||||    
T  5281269 gtcactaatataagtaaaaattcactttttagatacattcaattaatgatgtatgtgatctttattatatgtcacata 5281192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 7740494 - 7740579
Alignment:
Q  15 cagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||||||| | ||||||||  | |||||||||||||| ||| |||||  ||| |||||| || || ||||||||||||||||    
T  7740494 cagtaactattataagtaaaaatccacattttagattcattaaataaataaaatatgtaatctataataaagatcacatacatcat 7740579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 12168640 - 12168693
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtat 70  Q
    |||||||||| | ||||||||||| |||||| |||||| |||||||| ||||||    
T  12168640 gtcactattataagtaaaaatttaaattttaaattcatacaattaatgatgtat 12168693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 12672468 - 12672534
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| |||||||||||||||||||||||  |  |||| |||||||| | || ||||||||||||    
T  12672468 aaaaatttacattttagattcattcaattaatatcg--tatagtctttattgtggaccacatacatcat 12672534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 21884131 - 21884070
Alignment:
Q  39 tatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| |||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  21884131 tatattttaggttcattcatttaatgatgcacatggtctttattatagaccacatacatcat 21884070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 24870469 - 24870408
Alignment:
Q  39 tatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| |||||| ||||||||||||| ||||||||  | ||||||||||| ||||| ||||||    
T  24870469 tatagtttagaatcattcaattaattatgtatatggtatttattatagaccacatgcatcat 24870408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 24941143 - 24941200
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| |  ||||||||||| |||| |||||||||    
T  24941143 ttttagatacattcaattaatgatgtatgtggtctttattatatatcaaatacatcat 24941200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 25700565 - 25700508
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||| ||| |||||| |  ||| |||| |||||||||||||||||    
T  25700565 ttttagattcattcaataaatgatgtatgtggtctatattgtagatcacatacatcat 25700508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 30035209 - 30035270
Alignment:
Q  39 tatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||| ||||| ||||||  |||||||| ||||||||||| || ||| ||||||||    
T  30035209 tatattttagactcatttaattaagtatgtatatgatctttattatcgaccacgtacatcat 30035270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 32599508 - 32599569
Alignment:
Q  39 tatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| ||| ||| ||||||| ||||||||  ||||||||||| | ||||||||||||    
T  32599508 tatattttatatttattaaattaattatgtatatggtctttattataaaccacatacatcat 32599569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 51126137 - 51126194
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| |||||||||||||| |||||| |  ||| ||||||||| ||||||||||||    
T  51126137 ttttaggttcattcaattaatgatgtatgtggtctatattatagaccacatacatcat 51126194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 54931840 - 54931893
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattata 85  Q
    |||||| ||||||||| ||| ||||||||||| |||||||| || |||||||||    
T  54931840 aaaaatctatattttaaatttattcaattaattatgtatatgatttttattata 54931893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 4370429 - 4370489
Alignment:
Q  40 atattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||| ||| ||||||||  |||||||| ||||   ||||||||||    
T  4370429 atattttagattcattcaataaatgatgtatatggtctttattgtagacatcatacatcat 4370489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 5418634 - 5418566
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||  |||||||| |||| ||||||| |||||| |  |||||||||||  |||||||||||||    
T  5418634 aaaaatttactttttagatacattgaattaatgatgtatgtggtctttattatatgtcacatacatcat 5418566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 6462831 - 6462763
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||||| ||||||||||||||||| ||| |||||| | |||| | | || |||||||||||||||    
T  6462831 aaaattttattttttagattcattcaataaatgatgtatgtgatctatttaatggatcacatacatcat 6462763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 16468323 - 16468255
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| || |||||||||| ||||| ||||| ||  | || |||||||||||||| ||||||||||||    
T  16468323 aaaaatctacattttagatttattcatttaatgattcacatgatctttattatagaccacatacatcat 16468255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 18488557 - 18488609
Alignment:
Q  48 gattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||| ||| |||||| | |||| ||||| ||||||||||||||||    
T  18488557 gattcattcaataaatgatgtatgtgatctatattaaagatcacatacatcat 18488609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 21649447 - 21649384
Alignment:
Q  39 tatattttagattcat--tcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| ||||||  ||||||||| ||||| || |||||||||||||| |||||| |||||    
T  21649447 tatattttaaattcatattcaattaatgatgtacatgatctttattatagaccacatatatcat 21649384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 38298220 - 38298184
Alignment:
Q  21 ctattacacgtaaaaatttatattttagattcattca 57  Q
    |||||||| |||||| |||||||||||||||||||||    
T  38298220 ctattacaagtaaaattttatattttagattcattca 38298184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 70
Target Start/End: Original strand, 38938072 - 38938100
Alignment:
Q  42 attttagattcattcaattaataatgtat 70  Q
    |||||||||||||||||||||||||||||    
T  38938072 attttagattcattcaattaataatgtat 38938100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 48995577 - 48995625
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatcttta 80  Q
    |||| ||||||||||||||||||| ||| |||||||||| | |||||||    
T  48995577 aaaattttatattttagattcatttaataaataatgtatgtgatcttta 48995625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 54106496 - 54106564
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| |||||||||||||||||||| ||| |||||| |  |||  | || ||||||||||||||||    
T  54106496 aaaaattcatattttagattcattcaataaatgatgtatgttgtctacaataaagatcacatacatcat 54106564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 10117104 - 10117021
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | ||||||||| |||||||||||||||||||||| |||||||| || ||||||||||| ||||||||||||    
T  10117104 gtcactattataagcaaaaatttacattttagattcattcaattaatgatgtatatgatatttattatagaccacatacatcat 10117021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 35874487 - 35874554
Alignment:
Q  33 aaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||| ||||||||||||||    
T  35874487 aaaatttatattttatattcatttaattaatgatgtatatagtctttattataaatcacatacatcat 35874554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 2296619 - 2296525
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| |||| ||||||||| | |||||| |||  |||||||||||||||||||||||||||| ||  ||||||||||||| || |||||||||    
T  2296619 tacatctttcaatcactattataagtaaaattttgcattttagattcattcaattaataatgtacatggtctttattatagaccatatacatcat 2296525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 2805933 - 2805864
Alignment:
Q  31 taaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| |||| |||||| |||||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  2805933 taaaattttacattttaaattcattcaattaataatgtatatgatctttattatagaccacatatatcat 2805864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 9015937 - 9015880
Alignment:
Q  30 gtaaaaatttatattttagattcattcaattaataatgtatataatctttattataga 87  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  9015937 gtaaaaatctatattttagattcattcaattaatgatgtatatgatctttattataga 9015880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 7258719 - 7258639
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||||| | |||||| |||| |||||||||||||||||||||| ||| ||||  ||||||||||||| |||||||||    
T  7258719 gtcactattataagtaaaattttacattttagattcattcaattaatgatgcatatggtctttattatagaccacatacat 7258639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 7923481 - 7923413
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| |||||  | ||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  7923481 aaaaatttacatttttaaatcattcaattaataatgtatatagtctttattatagatcagatacatcat 7923413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 11335676 - 11335618
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||||||||||||||||| |||||| ||| ||| ||||||||||||    
T  11335676 attttagattcattcaattaataatgtatatgatctttgttagagagcacatacatcat 11335618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 18603489 - 18603547
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||| |||||||||||||||| |||||||||||| | ||||||||||||    
T  18603489 attttagattcatttaattaataatgtatatgatctttattatataccacatacatcat 18603547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 33385280 - 33385222
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||||    
T  33385280 attttagattcattcaattaatgatatatataatatttattatagaccacatacatcat 33385222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 3225801 - 3225869
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| || |||||| ||| ||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  3225801 aaaaatctacattttaaatttattcaattaatgatgtatatgatctttattatagaccacatacatcat 3225869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 34326379 - 34326296
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | |||||| |||  |||||| ||||||||||||||| ||||||||| ||||||||||| |  |||||||||||    
T  34326379 gtcactattataagtaaaattttgcattttacattcattcaattaatgatgtatatagtctttattataaacaacatacatcat 34326296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 36916578 - 36916669
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||| | |||||||||| | |||||| |||  |||||||||| ||||||||||| || ||| || ||||||||||||| |||||||||    
T  36916578 tacatcatccggtcactattataagtaaaattttgcattttagatttattcaattaatgatatatttagtctttattatagaccacatacat 36916669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 45045496 - 45045441
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattataga 87  Q
    |||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  45045496 aaaaatctatattttagattcattcaattaatgatgtatatggtctttattataga 45045441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 40640387 - 40640329
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||| ||| ||||||||    
T  40640387 attttagattcattcaattaatgatgtacatagtctttattatagaccacgtacatcat 40640329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 41753903 - 41753809
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||  |||||||||| |   ||||||| |||||||||||||||||||||||| ||||  ||  ||| ||||||||| ||||||||||||    
T  41753903 tacatcattatgtcactattataaacaaaaattaatattttagattcattcaattaatgatgttcattgtctgtattatagaccacatacatcat 41753809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 10934609 - 10934692
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||  ||||||||| ||||||| ||||||| |||||| || |||||||| |||| ||||||||||||    
T  10934609 gtcactattataagcaaaaaactatattttacattcatttaattaatgatgtatgtagtctttattgtagaccacatacatcat 10934692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 13290041 - 13290124
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | ||||| ||| ||||| ||||||||||||||||| |||||||  |||| |||||||| |||||| |||||    
T  13290041 gtcactattataagcaaaaaattacattttggattcattcaattaatagtgtatatggtcttcattatagaccacatatatcat 13290124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 14700236 - 14700327
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||||  |||||||||| | |||||| ||| ||||||||||||||||| || || || |||||  | ||||||||||| |||||||||    
T  14700236 tacatcatttggtcactattataagtaaaattttgtattttagattcattcatttgatgatatatatgttatttattatagaccacatacat 14700327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 23627672 - 23627755
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||| | ||||||||||| ||||| ||||| ||||| ||| |||||||| |||| ||||||||||||    
T  23627672 gtcactattataagcaaaaatctgtattttagatttattcatttaatgatgtacatagtctttattttagaccacatacatcat 23627755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 36058878 - 36058827
Alignment:
Q  44 tttagattcattcaattaataatgtatataatctttattatagatcacatac 95  Q
    |||| ||| |||||||||||||||||| | ||||||||||||||||||||||    
T  36058878 tttaaatttattcaattaataatgtatttgatctttattatagatcacatac 36058827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 5888441 - 5888387
Alignment:
Q  46 tagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||| ||||||||  |||||||||||||  |||||||||||    
T  5888441 tagattcattcaattaatgatgtatatggtctttattatagacaacatacatcat 5888387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 7428887 - 7428981
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| |||||| ||||||| | | ||||||| ||||||||| |||||||||| ||| |||||| | | ||  |||||| ||||||||||||||    
T  7428887 tacatccttcagttactattataagcaaaaattcatattttaggttcattcaataaatgatgtatgtgacctacattataaatcacatacatcat 7428981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 24017749 - 24017807
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| |||| |||||||||| |||||||| |||||||||| ||| ||||||||||||    
T  24017749 attttaaattccttcaattaatgatgtatatgatctttattacagaccacatacatcat 24017807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 29360857 - 29360799
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||||||| ||||||||||||||||  ||||| |||||||||| |||||||||    
T  29360857 attttatattcatttaattaataatgtatatggtctttgttatagatcatatacatcat 29360799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 14381270 - 14381327
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| |  ||||||||||| ||||||||||||||    
T  14381270 ttttagatacattcaattaatgatgtatgtggtctttattatatatcacatacatcat 14381327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 29916239 - 29916182
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||| || |||||||| |||| |||||||||  |||||||||||    
T  29916239 ttttagattcattcaattgatgatgtatatgatctatattatagactacatacatcat 29916182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 6614818 - 6614742
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacata 94  Q
    ||||||||| | |||||||| ||||||||  ||| ||||||||||| || |||||  ||||||||||||| ||||||    
T  6614818 tcactattataagtaaaaatctatattttctatttattcaattaattatatatattgtctttattatagaccacata 6614742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 7429011 - 7428943
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||||||||| ||| |||||| | || | || | ||| |||||||||||||    
T  7429011 aaaaatttatattttagattcattcaataaatgatgtatgtgatttataatgtaggtcacatacatcat 7428943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 15285772 - 15285704
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||  ||||| || |||||||||||  ||||||||| |||||||||||  |||||||||||||    
T  15285772 aaaaatttactttttaaatacattcaattaaggatgtatatagtctttattatatgtcacatacatcat 15285704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 15466141 - 15466073
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||  ||||| || |||||||||||  ||||||||| |||||||||||  |||||||||||||    
T  15466141 aaaaatttactttttaaatacattcaattaaggatgtatatagtctttattatatgtcacatacatcat 15466073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 27518434 - 27518366
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| || |||||||||||||||| ||||| ||| | ||| ||||||||||||| |||||| |||||    
T  27518434 aaaaatctacattttagattcattcatttaatgatgcacatagtctttattatagaccacatatatcat 27518366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 29424004 - 29424072
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||||||||| ||| || ||| || ||||||||  |||  |||||||||||    
T  29424004 aaaaatttatattttagattcattcaataaattatatatgtagtctttattgcagacaacatacatcat 29424072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 29598934 - 29599029
Alignment:
Q  4 attacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| || |||| |||||| |  |||||||| ||||||||||||| |||||| |||||||||  || |||||| |||| |||| |||||||||    
T  29598934 attacatcctttagtctctattataaataaaaattgatattttagattc-ttcaataaataatgtacgtagtctttaatatatatcaaatacatcat 29599029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 6396049 - 6395982
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatca 99  Q
    |||||| ||||||||| |||||| | ||||||  |||||| ||||||||||||| |||||||| ||||    
T  6396049 aaaaatctatattttaaattcatgcgattaatgttgtataaaatctttattataaatcacatatatca 6395982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 13496569 - 13496486
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | ||||||||| |||||| ||||||||| ||||| ||| | ||  ||||||||||||| || |||||||||    
T  13496569 gtcactattataagcaaaaatttacattttaaattcattcatttaatgatgcacatggtctttattatagaccaaatacatcat 13496486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 20524188 - 20524227
Alignment:
Q  33 aaaatttatattttagattcattcaattaataatgtatat 72  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  20524188 aaaattaattttttagattcattcaattaataatgtatat 20524227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 24287919 - 24287836
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||||| | |||||| |||  |||||||||| ||||| ||||| ||||||||  ||||||||||||| || |||||||||    
T  24287919 gtcattattataagtaaaactttgcattttagatttattcagttaatgatgtatatggtctttattatagaccatatacatcat 24287836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 33070299 - 33070216
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| |||  |||||||||||||||| |||||  |||||||  |||||||||||||  |||||||||||    
T  33070299 gtcactattataagcaaaattttgcattttagattcattcatttaatggtgtatatggtctttattatagactacatacatcat 33070216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 41387896 - 41387813
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||  ||||||||||||||||||| | |||||||||| |  ||||||||||| | ||| ||||||||    
T  41387896 gtcactattataagcaaaaaactatattttagattcattcattaaataatgtatgtggtctttattataaaccacgtacatcat 41387813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 7484648 - 7484706
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| | ||| ||||||||  |||||||||| || ||||||||||||    
T  7484648 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcat 7484706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 8506336 - 8506298
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtat 70  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  8506336 aaaaatttatgttttagattcattcaataaataatgtat 8506298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 10815466 - 10815532
Alignment:
Q  32 aaaaatttatattttagattcattcaattaa-taatgtatataatctttattatagatcacatacat 97  Q
    ||||||||| |||||| ||||||||||||||  ||||||||| | |||||||||| | |||||||||    
T  10815466 aaaaatttacattttaaattcattcaattaacaaatgtatatgaactttattataaaccacatacat 10815532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 13211258 - 13211328
Alignment:
Q  30 gtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||| |||||||| |||| ||||||| || ||| |  |||||||||||  |||||||||||||    
T  13211258 gtaaaaatttattttttagatacatttaattaatgatatatgtggtctttattatatgtcacatacatcat 13211328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 31505069 - 31505127
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| |||||||| ||||| ||| | ||| ||||||||||||| ||||||||||||    
T  31505069 attttaggttcattcatttaatgatgcacatagtctttattatagaccacatacatcat 31505127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 20546759 - 20546690
Alignment:
Q  30 gtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatca 99  Q
    |||||||| || |||||| ||| ||||||||||| || ||||   |||||||||| ||||||||||||||    
T  20546759 gtaaaaatctacattttaaattaattcaattaatgatatataaggtctttattattgatcacatacatca 20546690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 34580691 - 34580626
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||| ||| ||||||| |||| |||||||||| ||||||||  ||||||||||| | |||||||||    
T  34580691 aaaactttgtattttatattctttcaattaatgatgtatatggtctttattataaaccacatacat 34580626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 25267996 - 25268063
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| || |||||||||||||| ||||||| || ||||| |||||||||||| | || |||||||||    
T  25267996 aaaaatctacattttagattcatttaattaatgat-tatatgatctttattataaaccatatacatcat 25268063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 28939423 - 28939507
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaatt-----aataatgtatataatctttattatagatcacataca 96  Q
    |||||||||| | | ||||||||| |||||| ||||||| ||||     |||||||||||| |||||||||| | ||||||||||    
T  28939423 gtcactattataagcaaaaatttacattttaaattcatttaatttaataaataatgtatatgatctttattaaatatcacataca 28939507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 21586944 - 21586865
Alignment:
Q  21 ctattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| | ||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  21586944 ctattataagtaaaaatcaatattttagattcattcaattaatgatgtatatgatctttattatagaccacatacatcat 21586865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 30138909 - 30138839
Alignment:
Q  30 gtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||| |||| |||||||    
T  30138909 gtaaaaatttacattttagattcattcaattaatgatgtatatagtctttattatagaccacacacatcat 30138839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 24280955 - 24280875
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||||| | |||||||| || |||||| ||||||||||||||| ||||||||||| ||||||||||| |||||||||    
T  24280955 gtcactattataagtaaaaatctacattttaaattcattcaattaatgatgtatataatatttattatagaccacatacat 24280875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 2943346 - 2943263
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | ||||| |||||||||| |||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  2943346 gtcactattataagcaaaaaattatattttacattcattcaattaataatgtatgtactctttattgtagaccacatacatcat 2943263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 27554517 - 27554586
Alignment:
Q  31 taaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||| |||||||| |||||||||||| |||||| | |||||||||||| ||||||||||||||    
T  27554517 taaaaatttattttttagatacattcaattaatgatgtatgtgatctttattatatatcacatacatcat 27554586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 26904802 - 26904870
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||  |||||||||||||| |||||||  |||||||||||||| ||||||||||||    
T  26904802 aaaaatttatattttactttcattcaattaatgatgtatacgatctttattatagaccacatacatcat 26904870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 2534044 - 2533990
Alignment:
Q  47 agattcattcaattaataatgtatataatctttattatagatcacatacatcatc 101  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||    
T  2534044 agattcattcaattaataatgtatatagtctttattatacaccacatacatcatc 2533990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 4089908 - 4089840
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| ||||||||||||||| ||||||||  |||||||||| || || |||||||||    
T  4089908 aaaaatttatattttatattcattcaattaatgatgtatatggtctttattatggagcatatacatcat 4089840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 32549940 - 32549872
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| |||||||||||||||||||| ||| |||||| | ||||||| |||||| ||||||||||||    
T  32549940 aaaaattgatattttagattcattcaataaatgatgtatgtgatctttaatatagaccacatacatcat 32549872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 16872072 - 16871990
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||||| | |||||||||| ||||| ||||||||| ||||||| ||||||||||| ||||||||| |||||||| |||||    
T  16872072 gtcattattataagtaaaaatttgtattt-agattcatttaattaattatgtatataatatttattataaatcacataaatcat 16871990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 23797482 - 23797399
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | |||||| |||  |||||||||||||||||||||| |||||| |  |||||||||||||  |||||||||||    
T  23797482 gtcactattataagtaaaattttgcattttagattcattcaattaatgatgtatctggtctttattatagactacatacatcat 23797399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 6455556 - 6455638
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | | ||||||||| |||||||||||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  6455556 tcactattataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcat 6455638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 7295075 - 7295145
Alignment:
Q  30 gtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||||| |||||||||  ||| | |  ||||||||||| ||||||||||||||    
T  7295075 gtaaaaatttatattttagattcactcaattaatgttgtttgtggtctttattatatatcacatacatcat 7295145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 9930409 - 9930454
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatct 77  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  9930409 aaaaatttatattttagattcatttaattaattatgtatataatct 9930454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 22752581 - 22752646
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||||||||||||||||||||||| |||||||||||| || | || || | |||||||||||    
T  22752581 aaaaatttatattttagattcattcaataaataatgtatattatttataataaaaatcacatacat 22752646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 31813406 - 31813487
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattataga 87  Q
    |||||||| | |||||||||| |   ||||||||| |||||||||||||||||||||| ||||||||  |||| ||||||||    
T  31813406 tacatcatccggtcactattataaacaaaaatttacattttagattcattcaattaatgatgtatatggtcttcattataga 31813487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 45531969 - 45532038
Alignment:
Q  31 taaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||| | ||||||||| | |||||| |||||    
T  45531969 taaaaatttatattttagattaatttaattactaatgtatatagtttttattatacaccacatatatcat 45532038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 43103205 - 43103137
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatag 86  Q
    ||||||||| | |||||| ||||||||||||||| ||| ||||||| ||||||||||| |||| |||||    
T  43103205 tcactattataagtaaaattttatattttagatttatttaattaatgatgtatataatttttaatatag 43103137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 6847283 - 6847362
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||| | | ||||||||  |||||| ||| ||||||||||| |||||||| ||||||||||| || |||||||||    
T  6847283 tcactattataagcaaaaatttgcattttatatttattcaattaatgatgtatatgatctttattatggaacacatacat 6847362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 8447867 - 8447768
Alignment:
Q  1 ataattacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | ||| |||||||||| | | |||||| || |||||||||||||||| | ||| ||| | || |||||||||||||| || |||||||||    
T  8447867 ataattacacccttcggtcactattataagcaaaaatctacattttagattcattcattgaatgatgcacatgatctttattatagaccatatacatcat 8447768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 9555266 - 9555349
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| | | |||||| |||| |||||| ||| ||||||||||| ||||||||| ||||||| ||| | ||||||||||||    
T  9555266 gtcactatcataagtaaaattttacattttaaatttattcaattaatgatgtatatagtctttatcataaaccacatacatcat 9555349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 11002450 - 11002367
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | |||||||| || |||||||||||||||| ||||| ||| | ||  ||||| ||||||| ||||||||||||    
T  11002450 gtcactattataagtaaaaatctacattttagattcattcatttaatgatgcacatggtcttttttatagaccacatacatcat 11002367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 1706978 - 1706884
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| |||| |||||||| || | | ||||||| || |||||||| |||||| ||||| ||||||||  |||||||||||  |||||||||||||    
T  1706978 tacaccatttagtcactaatataagcaaaaattcattttttagatacattcatttaatgatgtatatggtctttattatatgtcacatacatcat 1706884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 3882572 - 3882634
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacata 94  Q
    ||||||| | ||||||||||||||||||||||  ||||| ||||||| |||||||| ||||||    
T  3882572 aaaaattaacattttagattcattcaattaatggtgtatttaatcttgattatagaccacata 3882634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 6837654 - 6837588
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatc 98  Q
    ||||||| || ||| |||||||||||||||||||||||||| ||   |||||| |||||||||||||    
T  6837654 aaaaattgatttttcagattcattcaattaataatgtatatgattcatattatggatcacatacatc 6837588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 21387611 - 21387665
Alignment:
Q  46 tagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||| |||||| || ||||||||||| | ||||||||||||    
T  21387611 tagattcattcaattaatgatgtatgtagtctttattatataccacatacatcat 21387665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 28306310 - 28306404
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||| |||||||||| |   |||||| || |||||||||||||||| ||||| ||| | ||||| ||||||||||| || |||||||||    
T  28306310 tacatccttcggtcactattataaccaaaaatctacattttagattcattcatttaatgatgcacataatttttattatagaccatatacatcat 28306404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 34275300 - 34275242
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| ||||| ||| | ||| ||||||||||||| ||||||||||||    
T  34275300 attttagattcattcatttaatgatgcacatagtctttattatagaccacatacatcat 34275242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 37489536 - 37489570
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataat 66  Q
    |||||||||||||||||||||||||||||||||||    
T  37489536 aaaaatttatattttagattcattcaattaataat 37489570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 43130265 - 43130307
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattata 85  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  43130265 ttttagattcattcaattaatgatgtatataatttttattata 43130307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 44416651 - 44416613
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtat 70  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  44416651 aaaaatttatattttagattcattcaattaattatgtat 44416613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 21886488 - 21886525
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgta 69  Q
    |||||||||||||||||||||||||||||||| |||||    
T  21886488 aaaaatttatattttagattcattcaattaatgatgta 21886525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 26385744 - 26385679
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||| |||| ||||||||| ||||||| |||||| |  ||||||||||||| |||||||||    
T  26385744 aaaaatttacatttaagattcatttaattaatgatgtatgtggtctttattatagaccacatacat 26385679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 27942357 - 27942414
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||||||| |||||||| |||  ||||||| | ||||||||||||    
T  27942357 ttttagattcattcaattaatgatgtatatgatccatattataaaccacatacatcat 27942414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 39960358 - 39960289
Alignment:
Q  31 taaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||| ||||||||||||||| || ||| || | ||||||||| | ||||| ||||||    
T  39960358 taaaaatttatattttaaattcattcaattaatgatatatgtagtttttattataaaccacatgcatcat 39960289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 41106105 - 41106158
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattata 85  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||| ||| |||||    
T  41106105 aaaaatctatattttaaattcatttaattaataatgtatataatatttgttata 41106158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 45002080 - 45002160
Alignment:
Q  15 cagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacataca 96  Q
    |||||||||||| |   |||| |||| |||||| |||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  45002080 cagtcactattataaacaaaactttacattttaaattcattcaattaataat-tttatagtctttattatatatcacataca 45002160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 46495488 - 46495419
Alignment:
Q  31 taaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| || |||||| ||| ||| ||||||| |||||||| ||||||||||||||  |||||||||||    
T  46495488 taaaaatatacattttaaatttatttaattaatgatgtatattatctttattatagactacatacatcat 46495419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 3882828 - 3882897
Alignment:
Q  32 aaaaatttatattttagattcattc----aattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||| |||||||||||||||||    ||||||| |||||| || ||||||||||||| |||||||||    
T  3882828 aaaaattaatattttagattcattcaattaattaatgatgtatttagtctttattatagaccacatacat 3882897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 29205318 - 29205394
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacat 93  Q
    |||||||||| | | ||||||  |||||||  ||||||| ||||||| |||||||| ||||||||||| ||||||||    
T  29205318 gtcactattataagcaaaaatcaatattttttattcattaaattaatgatgtatatgatctttattatcgatcacat 29205394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 31115615 - 31115695
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||||| | | ||| ||| | ||||||||||||| || | ||| ||||||||| ||||||||||||| |||||||||    
T  31115615 gtcactattataagcaaagattaacattttagattcatccattaaatgatgtatatattctttattatagaccacatacat 31115695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 5084539 - 5084484
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||| ||| ||||||||||| |||||||| ||||||||||||||  ||||||||    
T  5084539 attttatattaattcaattaatgatgtatattatctttattatagaaaacatacat 5084484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 12088945 - 12088862
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | |||||| |||  |||| |||||||||||||||||  |||||||| ||||||| ||||| || | |||||||    
T  12088945 gtcactattataagtaaaattttgcatttaagattcattcaattaatgttgtatatagtctttatcatagaccatacacatcat 12088862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 26477306 - 26477227
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattata 85  Q
    ||||||||||  ||||||||| |   |||||||||||||| ||||| ||| ||||||| |||||||| ||||||| ||||    
T  26477306 tacatcattcgatcactattataaacaaaaatttatatttaagatttatttaattaatgatgtatatgatctttaatata 26477227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 26553746 - 26553667
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattata 85  Q
    ||||||||||  ||||||||| |   |||||||||||||| ||||| ||| ||||||| |||||||| ||||||| ||||    
T  26553746 tacatcattcgatcactattataaacaaaaatttatatttaagatttatttaattaatgatgtatatgatctttaatata 26553667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 32490691 - 32490640
Alignment:
Q  49 attcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||| ||||||||| |||||||||||||  |||||||||||    
T  32490691 attcattccattaatgatgtatatagtctttattatagacaacatacatcat 32490640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 100
Target Start/End: Original strand, 35238985 - 35239028
Alignment:
Q  57 aattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| |||||||||| ||| ||||||||||||    
T  35238985 aattaataatgtatatgatctttattacagaccacatacatcat 35239028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 39136608 - 39136655
Alignment:
Q  53 attcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||| ||||||||||| ||||||||||| ||||| ||||||    
T  39136608 attcaattaatgatgtatataatatttattatagaccacattcatcat 39136655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 22332336 - 22332386
Alignment:
Q  50 ttcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||| |||||||| |||  || |||||||||||||||||||    
T  22332336 ttcattcaattaatgatgtatatgatccataatatagatcacatacatcat 22332386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 25774177 - 25774271
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| |||||||||| | | |||| ||   |||||| |||||||||| |||| || ||| || |||||||||||||  |||||||||||    
T  25774177 tacatcattcggtcactattataagcaaaagttatcattttatattcattcaagtaatgatttatgtagtctttattatagactacatacatcat 25774271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 25814791 - 25814733
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| ||||| ||||||||||| ||| ||||||||||| |  |||||||||||    
T  25814791 attttagatttattcatttaataatgtacatagtctttattataaactacatacatcat 25814733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 40176033 - 40175975
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||||||| || |||| ||||||| ||||||||||||| |||| |||||||||    
T  40176033 attttaaattcatttaactaattatgtatacaatctttattataaatcaaatacatcat 40175975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 46718049 - 46718130
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatata--atctttattata 85  Q
    ||||||||||  ||||||||| |  ||||| |||| |||||||||| | |||||||||||| ||||||  ||||||||||||    
T  46718049 tacatcattcgatcactattataaataaaattttacattttagatttagtcaattaataatatatatatgatctttattata 46718130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 1706839 - 1706892
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtat 70  Q
    ||||||| || | |||||||||||| |||||||| |||||||||||| ||||||    
T  1706839 gtcactaatataagtaaaaatttattttttagatacattcaattaatgatgtat 1706892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 3838227 - 3838170
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||| |||||||||| |  ||| || |||| ||||||||||||||    
T  3838227 ttttagattcattcaatcaataatgtatttggtctataatataaatcacatacatcat 3838170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 4406449 - 4406506
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| |  |||||||||||  |||||||||||||    
T  4406449 ttttagatacattcaattaatgatgtatgttgtctttattatatgtcacatacatcat 4406506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 24617818 - 24617859
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatata 73  Q
    |||||| ||| ||||||||||||||||| |||||||||||||    
T  24617818 aaaaatgtattttttagattcattcaataaataatgtatata 24617859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 25079239 - 25079296
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| | ||| ||||||||  |||||||||||||    
T  25079239 ttttagatacattcaattaatgatgtatgtgatccttattatatgtcacatacatcat 25079296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 33935027 - 33935060
Alignment:
Q  40 atattttagattcattcaattaataatgtatata 73  Q
    |||||||||||||||||| |||||||||||||||    
T  33935027 atattttagattcattcatttaataatgtatata 33935060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 34703551 - 34703494
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| ||||||||  |||||||||||  |||||| ||||||    
T  34703551 ttttagatacattcaattaatgatgtatatggtctttattatatgtcacatgcatcat 34703494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 38238816 - 38238873
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| |  |||||||||||  |||||||||||||    
T  38238816 ttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcat 38238873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 40417014 - 40416957
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| ||||||||  |||||||||||  |||||| ||||||    
T  40417014 ttttagatacattcaattaatgatgtatatggtctttattatatgtcacatgcatcat 40416957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 716353 - 716285
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||  |||||||| |||||||||||| |||||| | ||||||||| ||  ||| |||||||||    
T  716353 aaaaatttaatttttagatacattcaattaatgatgtatgtgatctttattctatgtcatatacatcat 716285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 22106688 - 22106756
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||| ||||||||  ||||||||||| |||||| |  |||||||||||  |||||||||||||    
T  22106688 aaaaatctattttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcat 22106756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 25774327 - 25774263
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtat 70  Q
    ||||||||||||||||||||| | | ||||||  | |||||||||||||||| | ||| ||||||    
T  25774327 tacatcattcagtcactattataagcaaaaatacacattttagattcattcactaaatgatgtat 25774263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 40529663 - 40529595
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||| ||||||||  ||||||||||| |||||| |  |||||||||||  |||||||||||||    
T  40529663 aaaaatctattttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcat 40529595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 71265 - 71344
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacataca 96  Q
    |||||||||| | | |||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||    
T  71265 gtcactattataagcaaaaatctatattttagattcattcaattaatgatgtatatgatctttattatagaccacataca 71344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 3100538 - 3100456
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | || |||||||| |||||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||    
T  3100538 tcactattataagtgaaaatttacattttagattcattcaattaatgatgtatatgatctttattatagactacatacatcat 3100456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 33075069 - 33075154
Alignment:
Q  15 cagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| || | | |||| ||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||    
T  33075069 cagtcactaatataagcaaaactttatattttagattcattcaattaataacgtatatgatctttactatagaccacatacatcat 33075154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 31691392 - 31691313
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||| ||||||||| | ||||||| ||| |||||||||    
T  31691392 tcactattataagtaaaaatttatatttgagattcattcaattaatgatgtatatattatttattacagaccacatacat 31691313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 31706080 - 31706013
Alignment:
Q  30 gtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  31706080 gtaaaaatttacattttaaattcatttaattaataatgtatataatttttattatagaccacatacat 31706013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 14772680 - 14772605
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcaca 92  Q
    |||||||||| | | |||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||    
T  14772680 gtcactattataagcaaaactttatattttagattaattcaattaatgatgtatatagtctttattatagaccaca 14772605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 7329977 - 7330071
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| | | |||| |||  |||||||||||||||| |||||||| ||||| |||||||||||| |||| | |||||||    
T  7329977 tacatcatccagtcactattataagcaaaactttgcattttagattcattcatttaataatatatatgatctttattatatatcatagacatcat 7330071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 30371452 - 30371387
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||| |||||||||||||||||| |||||||| |||||||  ||||||||||| |||||||||||    
T  30371452 aaaaaattatattttagattcatttaattaatattgtatatggtctttattataaatcacatacat 30371387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 17153456 - 17153512
Alignment:
Q  44 tttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||| |||| ||| |||||||||||| ||||||||||||||    
T  17153456 tttagattcattcaattaatgatgtgtatgatctttattatacatcacatacatcat 17153512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 25773362 - 25773294
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| |||||| ||||| ||||||||| ||||||||  |||||||||||||||| |||||||||    
T  25773362 aaaaatttacattttacattcaatcaattaatgatgtatatggtctttattatagatcaaatacatcat 25773294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 35032389 - 35032321
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| |||||||||||||||||||||| |||||||| || ||| |||||||  |||||||||||    
T  35032389 aaaaatttacattttagattcattcaattaattatgtatatgatttttgttatagactacatacatcat 35032321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 11795767 - 11795825
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||| |||||| |||||    
T  11795767 attttagattcattcaattaatgatgtatatggtctttattatagaccacatatatcat 11795825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 694227 - 694292
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||| || |||||| ||| ||||||||||| |||||||| |||||||||||||| |||||||||    
T  694227 aaaaatataaattttaaatttattcaattaattatgtatatgatctttattatagaccacatacat 694292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 780777 - 780724
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattata 85  Q
    |||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  780777 aaaaatatatattttaaattcattcaattaatgatgtatatgatctttattata 780724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 30778032 - 30778089
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||||||||| || ||| || |||| ||||||||||||||    
T  30778032 ttttagattcattcaattaataatgtatttagtctataatatatatcacatacatcat 30778089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 5984092 - 5984037
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||| ||| |||||    
T  5984092 attttagattcattcaattaatgatgtatatggtctttattatagaccacgtacat 5984037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 18033489 - 18033406
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||| || |||||||||| ||||| ||||| ||||| ||  ||||||||||||| ||||||||||||    
T  18033489 gtcactattataagcaaaaatctacattttagatttattcatttaatgatgtacatggtctttattatagaccacatacatcat 18033406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 26141761 - 26141844
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| |||| |||||||||||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  26141761 gtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcat 26141844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 33867955 - 33868014
Alignment:
Q  41 tattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| ||||||||||||||| || |||||| |||||||| |||| ||||||||||||    
T  33867955 tattttatattcattcaattaatgatatatatagtctttattgtagaccacatacatcat 33868014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 37685084 - 37685021
Alignment:
Q  37 tttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| |||||||||||||||||||||||||||| || ||| ||||||  | ||||||||||||    
T  37685084 tttattttttagattcattcaattaataatgtatgtagtctatattatgaaccacatacatcat 37685021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 38370521 - 38370438
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||  | |||||| ||| ||||||| ||| ||| ||||||| |||||||| ||||||||||||||  |||||||||||    
T  38370521 gtcactattgtaagtaaaactttgtattttatatttatttaattaatgatgtatatgatctttattatagactacatacatcat 38370438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 5259494 - 5259436
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| ||||| ||| | ||| ||||||||||||| ||||||||||||    
T  5259494 attttagattcattcatttaatgatgcacatagtctttattatagaccacatacatcat 5259436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 31154695 - 31154761
Alignment:
Q  31 taaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||||  ||||||||| ||||||||||| || |||||| | |||| ||||||||||||||||    
T  31154695 taaaaatttaccttttagatttattcaattaatgatctatatagtatttagtatagatcacatacat 31154761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 5110568 - 5110625
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||| |||||| |||||||||| ||||| | |||| |||||||||    
T  5110568 ttttagattcattcaataaataatatatataatctatattagaaatcaaatacatcat 5110625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 13157365 - 13157422
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||  ||||||||||| ||||||||  ||||||||||| ||||||||||||||    
T  13157365 ttttagatatattcaattaatgatgtatatggtctttattatatatcacatacatcat 13157422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 37870049 - 37870106
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| ||||||||||||| |||||||| |||||||||||  |||||| ||||||    
T  37870049 ttttagatacattcaattaatattgtatatagtctttattatatgtcacattcatcat 37870106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 37944634 - 37944691
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| | ||||||||||||  |||||||||||||    
T  37944634 ttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatcat 37944691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 41814404 - 41814441
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgta 69  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  41814404 aaaaatttacattttagattcattcaattaataatgta 41814441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 43482891 - 43482830
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacat 93  Q
    ||||||||| |||||| ||| ||||| ||||| |||||||| |||||||||||||| |||||    
T  43482891 aaaaatttacattttatatttattcatttaatgatgtatatgatctttattatagaccacat 43482830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 7505117 - 7505185
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||||||||||||| ||||| ||||  || ||| || | ||||||||||||||||||||||||    
T  7505117 aaaaatctatattttagattgattcatttaaagatatatgtactatttattatagatcacatacatcat 7505185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 8961252 - 8961308
Alignment:
Q  44 tttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| ||||||||||||||||||| |  |||||||||||  |||||||||||||    
T  8961252 tttagatacattcaattaataatgtatgtggtctttattatatgtcacatacatcat 8961308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 10437644 - 10437723
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||||| | |||||| ||| ||||||| ||||||||||||| | |||||||| || |||||||||||  ||||||||    
T  10437644 gtcactattataagtaaaactttgtattttaaattcattcaattagtgatgtatatgat-tttattatagactacatacat 10437723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 25408662 - 25408594
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| ||||||||||||||||| ||| |||||| |  |||||||| ||||  |||||||||||    
T  25408662 aaaaatttatgttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcat 25408594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 1098761 - 1098679
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| ||||| ||||||||||||| ||| |||||||||| || ||| || |||||| ||||||||||||    
T  1098761 gtcactattataagcaaaagtttattttttagattcatttaataaataatgtatgtagtctata-tatagaccacatacatcat 1098679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 14153375 - 14153458
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||| ||  ||||| ||||||||| ||||| ||| |||| |||||||||||||| |||||| |||||    
T  14153375 gtcactattataagcaaaaatctactttttatattcattcatttaatgatgcatatgatctttattatagaccacatatatcat 14153458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 14416432 - 14416495
Alignment:
Q  37 tttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| ||||||||||||||||||||| |||||| |  ||  ||||||| ||||||||||||||    
T  14416432 tttattttttagattcattcaattaatgatgtatgtggtccatattataaatcacatacatcat 14416495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 73
Target Start/End: Complemental strand, 15549434 - 15549403
Alignment:
Q  42 attttagattcattcaattaataatgtatata 73  Q
    ||||||||||||||||||||||||||||||||    
T  15549434 attttagattcattcaattaataatgtatata 15549403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 20518309 - 20518222
Alignment:
Q  13 ttcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||| | | |||||| ||  ||||| ||||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  20518309 ttcagtcactattataagcaaaaatctactttttacattcattcatttaatgatgcacatggtctttattatagaccacatacatcat 20518222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 22650970 - 22650907
Alignment:
Q  37 tttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| |||||||||| ||| | ||||| ||||||||  ||||||||||||| ||||||||||||    
T  22650970 tttacattttagatttatttatttaatgatgtatatggtctttattatagaccacatacatcat 22650907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 63
Target Start/End: Original strand, 26045286 - 26045317
Alignment:
Q  32 aaaaatttatattttagattcattcaattaat 63  Q
    ||||||||||||||||||||||||||||||||    
T  26045286 aaaaatttatattttagattcattcaattaat 26045317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 32398122 - 32398079
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataat 75  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||    
T  32398122 aaaaatctatattttaaattcattcaattaatgatgtatataat 32398079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 37554461 - 37554398
Alignment:
Q  37 tttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| |||||||||||||||||||||||||||| || | | ||||||  | ||||||||||||    
T  37554461 tttattttttagattcattcaattaataatgtatgtagtttatattatgaaccacatacatcat 37554398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 1100166 - 1100108
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| ||||| | ||| |||||| || ||||||||||||| ||||||||||||    
T  1100166 attttagattaattcattaaatgatgtatgtagtctttattatagaccacatacatcat 1100108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 3100412 - 3100494
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | | ||||||| | |||||||||||||||||| ||| |||||| || ||| || || |||||| |||||||||    
T  3100412 tcactattataagcaaaaattaacattttagattcattcaataaatgatgtatgtagtctataataaagatcatatacatcat 3100494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 15058941 - 15058887
Alignment:
Q  33 aaaatttatattttagattcattcaattaataatgtatataatctttattataga 87  Q
    |||||||| |||||| ||||||||| ||||| ||||||||||| ||||| |||||    
T  15058941 aaaatttacattttaaattcattcatttaatgatgtatataatttttataataga 15058887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 37944747 - 37944653
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||||| ||||||| || | | |||||||||| |||||||| |||||||||||| |||||| | |  | || || ||||||||||||||||    
T  37944747 tacaacattcggtcactaatataagcaaaaatttattttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcat 37944653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 3851395 - 3851452
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| |  |||||||||||  |||||||||||||    
T  3851395 ttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcat 3851452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 8694515 - 8694572
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||| |||||||||||| | ||| |||||||  | ||||||||||||    
T  8694515 ttttagattcattcatttaataatgtatgtgatccttattatgaaccacatacatcat 8694572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 9005055 - 9004998
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||||||||||||||||||||| | || | |||||||||  |||||||||||    
T  9005055 ttttaggttcattcaattaataatgtatgtgatttatattatagactacatacatcat 9004998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 11262360 - 11262417
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| |  |||||||||||  |||||||||||||    
T  11262360 ttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcat 11262417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 12165392 - 12165335
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| |||||||||||||| |||||||| || | ||||||| | ||||||||||||    
T  12165392 ttttaggttcattcaattaatgatgtatatgatttatattatataccacatacatcat 12165335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 17096475 - 17096532
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||| |||||||||| | |||| || |||| | ||||||||||||    
T  17096475 ttttagattcattcaatcaataatgtatttgatctataatataaaccacatacatcat 17096532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 19531409 - 19531352
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| |  |||||||||||  |||||||||||||    
T  19531409 ttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcat 19531352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 19868943 - 19868980
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgta 69  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  19868943 aaaaatctatattttagattcattcatttaataatgta 19868980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 35172530 - 35172481
Alignment:
Q  51 tcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||| |  ||| |||||||| |||||||||||||    
T  35172530 tcattcaattaataatgtatgtggtctatattataggtcacatacatcat 35172481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 42013854 - 42013911
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||||||| |||||| |  |||||||||||  |||||||||||||    
T  42013854 ttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcat 42013911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 70
Target Start/End: Complemental strand, 14642125 - 14642097
Alignment:
Q  42 attttagattcattcaattaataatgtat 70  Q
    |||||||||||||||||||||||||||||    
T  14642125 attttagattcattcaattaataatgtat 14642097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 16602225 - 16602273
Alignment:
Q  49 attcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    |||||||||||||||||| |||||  ||||||||||| | |||||||||    
T  16602225 attcattcaattaataatatatatggtctttattataaaccacatacat 16602273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 26300132 - 26300200
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||  |||||||| |||||||||||| |||||| |  |||||||||||  ||| |||||||||    
T  26300132 aaaaatttactttttagatacattcaattaatgatgtatgtggtctttattatatgtcatatacatcat 26300200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 41005787 - 41005719
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| ||||||| ||||||| | ||||||  || ||| ||||||  |||||||||||    
T  41005787 aaaaatttatattttaaattcattaaattaatgaggtatatggtcgttagtatagactacatacatcat 41005719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 24633 - 24695
Alignment:
Q  38 ttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||    
T  24633 ttatattttagattcattcaattaataacgtatattatctttattatagaccacatacatcat 24695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 89717 - 89649
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| |||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  89717 aaaaatttacattttaaatttattcaattaatgatgtatatgatctttattatagatcacatacatcat 89649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 33689224 - 33689318
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| | |||||||||| | | ||||||  |||||||| ||||||||||||||||||||||||| | |||||||||||  |||||||||||    
T  33689224 tacatcatccggtcactattataagcaaaaatcaatattttatattcattcaattaataatgtatatagtatttattatagactacatacatcat 33689318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 13281540 - 13281623
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||| || |||||||||||||||||||||| |||||||| |||||| ||||||  ||||||||||||    
T  13281540 gtcactattataagcaaaaatctagattttagattcattcaattaatgatgtatatgatctttcttatagtccacatacatcat 13281623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 12383738 - 12383640
Alignment:
Q  2 taattacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||| | |||||||||| |   |||||| || |||||||||| ||||||||||| ||||| || ||||||||||||||  |||||||||||    
T  12383738 taattacatcatccggtcactattataaacaaaaatctacattttagattaattcaattaatgatgtacatgatctttattatagactacatacatcat 12383640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 11746347 - 11746294
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattata 85  Q
    ||||||||| |||||||||||||||||||||| |||||||| ||||||||||||    
T  11746347 aaaaatttacattttagattcattcaattaatgatgtatatgatctttattata 11746294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 6032973 - 6033055
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | ||||||||| |||||||||||||||| ||| |||||||||| |  |||||| ||||||  |||||||||||    
T  6032973 tcactattataagtaaaaattgatattttagattcatttaataaataatgtatgtggtctttaatatagactacatacatcat 6033055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 8449710 - 8449625
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttat--tatagatcacatacatcat 100  Q
    |||||||||| | | ||||||| |||||||||||||||||||||||| ||| |||| ||||| ||  |||||| ||||||||||||    
T  8449710 gtcactattataagcaaaaattaatattttagattcattcaattaatgatgcatatgatcttgattatatagaccacatacatcat 8449625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 8458514 - 8458429
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttat--tatagatcacatacatcat 100  Q
    |||||||||| | | ||||||| |||||||||||||||||||||||| ||| |||| ||||| ||  |||||| ||||||||||||    
T  8458514 gtcactattataagcaaaaattaatattttagattcattcaattaatgatgcatatgatcttgattatatagaccacatacatcat 8458429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 12383920 - 12383842
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacataca 96  Q
    ||||||||| | | |||||| || |||||||| ||||||||||||| ||||||||| ||||||||||||| || |||||    
T  12383920 tcactattataagcaaaaatctacattttagactcattcaattaattatgtatatattctttattatagaccatataca 12383842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 12218557 - 12218496
Alignment:
Q  39 tatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| ||||||||||||||||||| |||||||  ||||||||||||||| ||||| |||||    
T  12218557 tatatattagattcattcaattaatgatgtataagatctttattatagattacatatatcat 12218496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 3199837 - 3199773
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacataca 96  Q
    ||||| ||| |||||| |||||||||||||||| ||||||| |||||||||||| | ||||||||    
T  3199837 aaaaacttacattttatattcattcaattaatagtgtatatgatctttattataaaccacataca 3199773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 6560776 - 6560708
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| ||| |||||||||||||||| ||||| ||| | ||| ||||||||||||| ||||||||||||    
T  6560776 aaaaaattacattttagattcattcatttaatgatgcacatagtctttattatagaccacatacatcat 6560708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 8146068 - 8146000
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| ||| |||||||||||||||| ||||| ||||| ||  ||||||||||||| ||||||||||||    
T  8146068 aaaaaattacattttagattcattcatttaatgatgtacatggtctttattatagaccacatacatcat 8146000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 18886427 - 18886359
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||||||||||||| ||||||||||||||| ||||||   |||||||||||| |||||| |||||    
T  18886427 aaaactttatattttagagtcattcaattaataacgtatattgcctttattatagaccacatatatcat 18886359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 21506582 - 21506514
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||  |||||||| |||||||||||| |||||| | ||||||||||||  |||||||||||||    
T  21506582 aaaaatttaatttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatcat 21506514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 31398360 - 31398277
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||| |||| |||||||||||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  31398360 gtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcat 31398277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 11637176 - 11637246
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattataga 87  Q
    |||||||||| | | ||||  ||| |||||| ||||||||||||||| |||||||| ||||||||||||||    
T  11637176 gtcactattataagcaaaacattacattttaaattcattcaattaatgatgtatatgatctttattataga 11637246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 15467691 - 15467625
Alignment:
Q  33 aaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatca 99  Q
    ||||||||| ||| ||||||||||||||||| |||||| | || | || ||||||||||||||||||    
T  15467691 aaaatttatttttcagattcattcaattaatgatgtatgtgatttataatatagatcacatacatca 15467625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 15517121 - 15517179
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| | ||| ||||||||  ||||||||||||| ||||||||||||    
T  15517121 attttagattcattcattaaatgatgtatatcgtctttattatagaccacatacatcat 15517179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 31714654 - 31714588
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatc 98  Q
    |||||| || ||||||| |||||||||||||| |||||||| || ||||||||| |||| |||||||    
T  31714654 aaaaatctacattttaggttcattcaattaatgatgtatatgatatttattatatatcatatacatc 31714588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 31996530 - 31996588
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||||||||||||||||||||||||||  | |||||||||||  |||||||||||    
T  31996530 atttcagattcattcaattaataatgtatatggtatttattatagactacatacatcat 31996588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 6263371 - 6263440
Alignment:
Q  32 aaaaatttatattttagattcattcaatt-aataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||| |||||||||||||| |||||||| ||| |||||||| |||||||||||| | |||| |||||||    
T  6263371 aaaaaattatattttagattaattcaattaaatgatgtatatgatctttattatataccacacacatcat 6263440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 13506829 - 13506910
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattataga 87  Q
    |||||| ||| |||||||||| | | |||| |||| || ||| ||||||| ||||||| |||||||| ||||||||||||||    
T  13506829 tacatccttcggtcactattataagcaaaagtttacatcttaaattcatttaattaatgatgtatatgatctttattataga 13506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 21998071 - 21998128
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| ||||||||||||||||||| | || |||||||||  |||||||||||||    
T  21998071 ttttagatacattcaattaataatgtatgtgatatttattatatgtcacatacatcat 21998128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 30460749 - 30460664
Alignment:
Q  15 cagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| || | | |||||||||  ||||||||  ||||||||||| |||||| |  ||||||||||| ||||||||||||||    
T  30460749 cagtcactaatataagcaaaaatttactttttagatagattcaattaatgatgtatgtggtctttattatatatcacatacatcat 30460664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 31158973 - 31158897
Alignment:
Q  20 actattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||| | |||||||| || |||||||||||||| ||||||| || || || |||||||||||||| |||||||||    
T  31158973 actattataagtaaaaatctacattttagattcattaaattaatgatata-atgatctttattatagaccacatacat 31158897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 2827580 - 2827648
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| |||| |||||||||||||| | ||||| |||||||| | |||||||||||| ||||| ||||||    
T  2827580 aaaattttacattttagattcatttatttaatgatgtatatgaactttattatagaccacatgcatcat 2827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 33053786 - 33053854
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||| ||||||||||||||||| ||| |||||| | ||||||||| ||||  |||||||||||    
T  33053786 aaaaatctatgttttagattcattcaataaatgatgtatgtgatctttattgtagacaacatacatcat 33053854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 14031790 - 14031751
Alignment:
Q  30 gtaaaaatttatattttagattcattcaattaataatgta 69  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  14031790 gtaaaaatctatattttagattcattcaattaatgatgta 14031751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 13277141 - 13277103
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtat 70  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  13277141 aaaaatttatattttagattcattcaataaatgatgtat 13277103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 17214314 - 17214252
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacata 94  Q
    |||||||||||||||| ||||||| ||||||| |||||| |  ||||||| ||||| ||||||    
T  17214314 aaaaatttatattttatattcatttaattaattatgtatgtggtctttataatagaccacata 17214252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 28554942 - 28555008
Alignment:
Q  6 tacatcattcagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatat 72  Q
    |||||| | ||||||||| || | ||||||||||| ||||||| |||||||| ||||| ||||||||    
T  28554942 tacatcctccagtcactaatataagtaaaaatttacattttaggttcattcatttaatgatgtatat 28555008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 32254954 - 32254872
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| | | |||| || |||||||||||||||||| | ||| |||||| |  |||||||||||||  |||||||||||    
T  32254954 tcactattataagcaaaagttaatattttagattcattcattaaatgatgtatgtggtctttattatagactacatacatcat 32254872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 34379766 - 34379824
Alignment:
Q  42 attttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| | ||| ||||||||  |||||||||| || ||||||||||||    
T  34379766 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcat 34379824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 10258412 - 10258355
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||||||||||| ||||||||  || |||||||||| ||  ||||||||    
T  10258412 ttttagattcattcaattaatgatgtatatggtcattattatagaccatgtacatcat 10258355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 15467605 - 15467662
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||||||| ||||| | |||||| | |||| ||||||| ||||||||||||||    
T  15467605 ttttagattcatttaattattgatgtatgtgatctatattataaatcacatacatcat 15467662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 17773533 - 17773590
Alignment:
Q  43 ttttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| |||||||| ||| |||||| |  ||||||||||| ||||||||||||||    
T  17773533 ttttagatacattcaataaatgatgtatgtggtctttattatatatcacatacatcat 17773590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 5571640 - 5571572
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||| ||| ||||||||||| ||||||| ||| |||||||| | |||||||| ||| |||||| |||||    
T  5571640 aaaactttttattttagattaattcaatcaatgatgtatatgacctttattacagaccacatatatcat 5571572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 12104864 - 12104796
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| | |||||||||| ||| | | ||| || |||||| ||||||||||| ||||||||||||||    
T  12104864 aaaaattaacattttagatttatttattaaatcatatatatagtctttattataaatcacatacatcat 12104796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 146087 - 146019
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||  |||||||||||||||||||||| ||||||||  |||||||| |||| ||||||||||||    
T  146087 aaaaatttgcattttagattcattcaattaatgatgtatatggtctttattttagaccacatacatcat 146019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 216294 - 216362
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||||||||| ||||||| ||||||| ||| |||| |||||||||||| |  |||||||||||    
T  216294 aaaaatttatattttaaattcatttaattaatgatgcatatgatctttattataaacgacatacatcat 216362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 7791 - 7708
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||| || |||||||||||||||| ||||| ||| | ||  ||||||||||||| ||||||||||||    
T  7791 gtcactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcat 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 4351 - 4418
Alignment:
Q  15 cagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttatt 82  Q
    ||||||||| || | | |||| ||||||||||||||||||||||||||||| |||||| |||||||||    
T  4351 cagtcactaatataagcaaaactttatattttagattcattcaattaataacgtatatgatctttatt 4418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 2427 - 2506
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||| | | ||||||||| || ||||||||||||| ||||| ||| | || |||||||||||||| |||||||||    
T  2427 tcactattataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacatacat 2506  T

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Target: scaffold0341; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 10082 - 10161
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacat 97  Q
    ||||||||| | | ||||||||| || ||||||||||||| ||||| ||| | || |||||||||||||| |||||||||    
T  10082 tcactattataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacatacat 10161  T

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Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 139302 - 139385
Alignment:
Q  17 gtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||||| | | |||||| ||| ||||| ||||||||| ||||| ||| | || |||||||||||||| ||||||||||||    
T  139302 gtcactattataagcaaaaatctattttttacattcattcatttaatgatgcacatgatctttattatagaccacatacatcat 139385  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 6217 - 6302
Alignment:
Q  15 cagtcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||||| || | | ||||| ||| ||||| |||||||||| ||||| ||| | ||  ||||||||||||||||||||||||||    
T  6217 cagtcactaatataagcaaaaaattacattttcgattcattcatttaatgatgcacatggtctttattatagatcacatacatcat 6302  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 88973 - 88907
Alignment:
Q  32 aaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||| ||||||||| ||||||||||||||| |||||| |  ||||||| |||||||| |||||||||    
T  88973 aaaaatctatattttatattcattcaattaatgatgtatgt--tctttatcatagatcatatacatcat 88907  T

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Target: scaffold0470 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 4104 - 4028
Alignment:
Q  18 tcactattacacgtaaaaatttatattttagattcattcaattaataatgtatataatctttattatagatcacata 94  Q
    ||||||||| | |||||||| ||||||||  ||| ||||||||||| || |||||  ||||||||||||| ||||||    
T  4104 tcactattataagtaaaaatctatattttctatttattcaattaattatatatattgtctttattatagaccacata 4028  T

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Target: scaffold0113 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 40564 - 40504
Alignment:
Q  40 atattttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    ||||||| |||| |||||||||||  ||||||| |||||||||||||| | ||||||||||    
T  40564 atattttggatttattcaattaatgttgtatatgatctttattatagaccgcatacatcat 40504  T

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Target: scaffold1476 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1476
Description:

Target: scaffold1476; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 693 - 748
Alignment:
Q  44 tttagattcattcaattaataatgtatataatctttattatagatcacatacatcat 100  Q
    |||||||| ||||||||||| |||||||| || ||||||||||||| | ||||||||    
T  693 tttagatttattcaattaatgatgtatatgat-tttattatagatcgcgtacatcat 748  T

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