View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1433_low_45 (Length: 283)
Name: NF1433_low_45
Description: NF1433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1433_low_45 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 24 - 283
Target Start/End: Original strand, 23711911 - 23712170
Alignment:
| Q |
24 |
aaacaagaacaaatcaatatcaataataataaatgtggctactttgaattgaaaacgtggagaaggatgggtcaaggtggtcttagttgtagaggtagtc |
123 |
Q |
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| T |
23711911 |
aaacaagaacaactcaatatcaataataataaatgtggctactttgaattgaaaacgtggagaaggatgggtcaaggtggtcttagttgtagaggtagtc |
23712010 |
T |
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| Q |
124 |
atgaacatggactctttcgtgctgtccaacatggtgacctgaaaactgtttctactcctttacagactcacccttctcttctcaatcgtactactgttta |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |
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| T |
23712011 |
atgaacatggactctttcgtgctgtccaacatggtgacctcaaaactgtttctactcttttacagactcacccttctcttctcaatcgtactaccgttta |
23712110 |
T |
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| Q |
224 |
tgatcatcattcccctcttcatattgctgctgccaatggtcagatccaggttcaattctt |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23712111 |
tgatcatcattcccctcttcatattgctgctgccaatggtcagatccaggttcaattctt |
23712170 |
T |
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