View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1433_low_48 (Length: 280)
Name: NF1433_low_48
Description: NF1433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1433_low_48 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 36194037 - 36194288
Alignment:
| Q |
13 |
aatatataaataagaacctttaatggaagaaggtagcgaatgaatacgtatctttggaagcttgccatgttggttaatacagtcattttgccaaccttaa |
112 |
Q |
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| T |
36194037 |
aatatataaataagaacctttaatggaagaaggtagcgaatgaatatgtatctttggaagcttgccatgttggttaatatagtcattttgccaaccttaa |
36194136 |
T |
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| Q |
113 |
caaccgttccatctttgtttatccaaggttttgcttcgaaatattttaatccatagtcatgaagactttggtatctcaatgggtttctaacagaggaacc |
212 |
Q |
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| T |
36194137 |
caaccgttccatctttgtttatccaaggttttgctttgaaatattttaatccatagtcatgaaaactttggtatctcaatgggtttctaacagaggaacc |
36194236 |
T |
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| Q |
213 |
cacatgatataccccatctctaggttgatttgcatgagccaccatagccact |
264 |
Q |
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| T |
36194237 |
cacatgatataccccatctctaggttgatttgcatgagccaccatagccact |
36194288 |
T |
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