View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1433_low_5 (Length: 627)

Name: NF1433_low_5
Description: NF1433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1433_low_5
NF1433_low_5
[»] chr5 (29 HSPs)
chr5 (441-606)||(11734839-11735005)
chr5 (553-606)||(12891722-12891777)
chr5 (553-606)||(17331374-17331429)
chr5 (553-606)||(28040675-28040730)
chr5 (553-606)||(33164488-33164543)
chr5 (553-606)||(34431106-34431161)
chr5 (553-606)||(39179848-39179903)
chr5 (553-606)||(6681896-6681949)
chr5 (553-606)||(178126-178181)
chr5 (553-606)||(3740403-3740458)
chr5 (553-606)||(6281090-6281145)
chr5 (553-606)||(6635296-6635351)
chr5 (553-606)||(17699599-17699654)
chr5 (553-606)||(27241110-27241165)
chr5 (553-606)||(29097835-29097890)
chr5 (553-606)||(32347734-32347789)
chr5 (553-605)||(17096260-17096314)
chr5 (553-605)||(42609190-42609244)
chr5 (553-605)||(43493918-43493972)
chr5 (553-606)||(39531424-39531478)
chr5 (553-606)||(17687251-17687306)
chr5 (553-606)||(18653828-18653883)
chr5 (553-605)||(3079326-3079380)
chr5 (554-606)||(12439654-12439708)
chr5 (554-606)||(20483233-20483287)
chr5 (27-106)||(10350439-10350519)
chr5 (553-606)||(23882136-23882191)
chr5 (31-67)||(32882704-32882740)
chr5 (553-606)||(42396532-42396587)
[»] chr7 (27 HSPs)
chr7 (553-606)||(5684411-5684466)
chr7 (553-606)||(5709461-5709516)
chr7 (553-606)||(10094487-10094542)
chr7 (553-606)||(15674632-15674687)
chr7 (553-606)||(42603789-42603844)
chr7 (553-605)||(28664933-28664987)
chr7 (553-606)||(1281157-1281212)
chr7 (553-606)||(11833065-11833120)
chr7 (553-606)||(21990708-21990763)
chr7 (553-606)||(42644722-42644777)
chr7 (21-108)||(24887849-24887936)
chr7 (553-606)||(9719993-9720049)
chr7 (553-606)||(32643058-32643113)
chr7 (553-606)||(39532995-39533050)
chr7 (553-606)||(43847116-43847171)
chr7 (553-606)||(45457576-45457631)
chr7 (553-605)||(3266434-3266488)
chr7 (553-605)||(17473744-17473798)
chr7 (553-605)||(17579416-17579470)
chr7 (553-605)||(21603508-21603562)
chr7 (553-606)||(2622638-2622693)
chr7 (566-607)||(6646609-6646652)
chr7 (553-606)||(9785363-9785418)
chr7 (553-606)||(10574427-10574482)
chr7 (557-606)||(24320243-24320294)
chr7 (565-606)||(26161038-26161081)
chr7 (553-606)||(32740799-32740854)
[»] chr6 (16 HSPs)
chr6 (553-606)||(15590099-15590154)
chr6 (553-606)||(2304830-2304885)
chr6 (553-606)||(12481390-12481445)
chr6 (553-606)||(6296269-6296324)
chr6 (553-606)||(6303079-6303134)
chr6 (553-606)||(19402828-19402883)
chr6 (553-605)||(4921902-4921956)
chr6 (553-605)||(8693678-8693732)
chr6 (554-605)||(21507829-21507882)
chr6 (553-606)||(31937440-31937494)
chr6 (560-606)||(4393823-4393871)
chr6 (553-606)||(6419878-6419933)
chr6 (553-606)||(23638138-23638193)
chr6 (553-606)||(31705211-31705266)
chr6 (555-606)||(23654298-23654351)
chr6 (559-605)||(29927115-29927163)
[»] chr3 (30 HSPs)
chr3 (553-606)||(41868322-41868377)
chr3 (553-606)||(34103745-34103800)
chr3 (553-606)||(40013300-40013355)
chr3 (553-606)||(48652468-48652523)
chr3 (553-606)||(54239046-54239101)
chr3 (553-606)||(13702000-13702055)
chr3 (553-606)||(14585508-14585563)
chr3 (553-606)||(22485011-22485066)
chr3 (553-606)||(34960886-34960941)
chr3 (553-606)||(35174750-35174805)
chr3 (553-606)||(36691827-36691882)
chr3 (553-606)||(40883896-40883951)
chr3 (553-605)||(32080783-32080837)
chr3 (554-606)||(49628115-49628169)
chr3 (553-606)||(3312489-3312544)
chr3 (553-606)||(11819129-11819184)
chr3 (553-606)||(31270372-31270427)
chr3 (553-606)||(31462774-31462829)
chr3 (557-606)||(36624722-36624773)
chr3 (553-606)||(38527309-38527364)
chr3 (557-606)||(48400949-48401000)
chr3 (553-605)||(39610258-39610312)
chr3 (553-606)||(19861307-19861363)
chr3 (17-63)||(37083834-37083880)
chr3 (557-604)||(55090613-55090662)
chr3 (553-606)||(2147772-2147828)
chr3 (553-606)||(3456989-3457044)
chr3 (553-606)||(4206539-4206594)
chr3 (553-606)||(33637449-33637504)
chr3 (557-606)||(53155458-53155509)
[»] chr4 (42 HSPs)
chr4 (553-607)||(6911726-6911782)
chr4 (553-606)||(7083836-7083891)
chr4 (553-606)||(11210333-11210388)
chr4 (553-606)||(24611819-24611874)
chr4 (553-606)||(24825695-24825750)
chr4 (553-606)||(29268797-29268852)
chr4 (553-606)||(30202084-30202139)
chr4 (553-605)||(43244402-43244456)
chr4 (553-606)||(36124369-36124422)
chr4 (554-606)||(38944168-38944221)
chr4 (557-606)||(6882006-6882057)
chr4 (553-606)||(7060370-7060425)
chr4 (553-606)||(8517476-8517531)
chr4 (553-606)||(26674418-26674473)
chr4 (553-606)||(39837641-39837696)
chr4 (553-606)||(50801263-50801318)
chr4 (553-605)||(26742484-26742538)
chr4 (554-606)||(45351090-45351144)
chr4 (554-606)||(45360569-45360623)
chr4 (553-606)||(13586260-13586316)
chr4 (553-606)||(626569-626623)
chr4 (553-606)||(5814393-5814448)
chr4 (553-606)||(13965606-13965661)
chr4 (553-606)||(20399923-20399978)
chr4 (553-606)||(22757140-22757195)
chr4 (557-606)||(25658217-25658268)
chr4 (553-606)||(39523455-39523510)
chr4 (553-606)||(44757062-44757117)
chr4 (557-606)||(51152175-51152225)
chr4 (554-606)||(8712577-8712631)
chr4 (553-605)||(29922883-29922937)
chr4 (557-606)||(7861226-7861276)
chr4 (557-607)||(12717136-12717189)
chr4 (18-107)||(3535111-3535200)
chr4 (553-599)||(24100185-24100235)
chr4 (20-73)||(39276332-39276385)
chr4 (553-606)||(478032-478087)
chr4 (553-598)||(19745435-19745482)
chr4 (553-598)||(19794324-19794371)
chr4 (557-606)||(20887776-20887826)
chr4 (553-606)||(24568733-24568788)
chr4 (553-606)||(43493307-43493362)
[»] scaffold1379 (2 HSPs)
scaffold1379 (553-606)||(1106-1161)
scaffold1379 (553-606)||(21-76)
[»] scaffold0321 (1 HSPs)
scaffold0321 (553-606)||(7144-7199)
[»] scaffold0312 (1 HSPs)
scaffold0312 (553-606)||(6183-6238)
[»] chr8 (25 HSPs)
chr8 (553-606)||(7579883-7579938)
chr8 (553-606)||(9501636-9501691)
chr8 (553-606)||(30026908-30026963)
chr8 (553-605)||(41361778-41361832)
chr8 (553-606)||(10338850-10338905)
chr8 (553-606)||(14600726-14600781)
chr8 (553-606)||(31202504-31202559)
chr8 (553-606)||(31308194-31308249)
chr8 (557-606)||(39067717-39067768)
chr8 (554-606)||(2234498-2234552)
chr8 (554-606)||(37612700-37612754)
chr8 (553-606)||(12329672-12329728)
chr8 (554-604)||(22787539-22787591)
chr8 (557-606)||(1810248-1810299)
chr8 (553-606)||(11161928-11161983)
chr8 (557-606)||(13570754-13570805)
chr8 (557-606)||(24699882-24699933)
chr8 (557-606)||(24791196-24791247)
chr8 (554-606)||(37128514-37128568)
chr8 (553-604)||(10147993-10148046)
chr8 (553-606)||(2025237-2025292)
chr8 (561-606)||(3204784-3204831)
chr8 (557-606)||(15288826-15288877)
chr8 (557-606)||(15469195-15469246)
chr8 (553-605)||(23971125-23971177)
[»] chr2 (33 HSPs)
chr2 (553-606)||(10287026-10287081)
chr2 (553-606)||(38535325-38535380)
chr2 (553-605)||(12704733-12704787)
chr2 (18-67)||(5701220-5701269)
chr2 (554-604)||(28231119-28231171)
chr2 (553-606)||(4604327-4604382)
chr2 (553-606)||(9978689-9978744)
chr2 (553-606)||(13740680-13740735)
chr2 (553-606)||(25067898-25067953)
chr2 (553-606)||(27095751-27095806)
chr2 (553-606)||(33012123-33012178)
chr2 (553-606)||(35333551-35333606)
chr2 (553-606)||(43474148-43474203)
chr2 (554-606)||(31908836-31908890)
chr2 (553-605)||(32314488-32314542)
chr2 (553-606)||(15919920-15919974)
chr2 (560-606)||(12891139-12891187)
chr2 (556-606)||(20561152-20561204)
chr2 (553-607)||(28261907-28261963)
chr2 (553-606)||(34416781-34416836)
chr2 (18-109)||(42139325-42139417)
chr2 (553-606)||(44942331-44942386)
chr2 (553-605)||(13879027-13879081)
chr2 (553-605)||(14019152-14019206)
chr2 (553-606)||(4732117-4732171)
chr2 (553-606)||(17268146-17268199)
chr2 (553-600)||(34471012-34471061)
chr2 (553-606)||(4426678-4426733)
chr2 (553-606)||(7072968-7073023)
chr2 (553-606)||(9689993-9690048)
chr2 (566-607)||(20607331-20607374)
chr2 (557-606)||(32015274-32015325)
chr2 (557-606)||(36868058-36868109)
[»] chr1 (27 HSPs)
chr1 (553-606)||(424311-424366)
chr1 (553-606)||(4882379-4882434)
chr1 (553-606)||(27534745-27534800)
chr1 (556-606)||(12871670-12871722)
chr1 (556-606)||(29726616-29726668)
chr1 (552-606)||(32784153-32784209)
chr1 (553-606)||(3232834-3232889)
chr1 (553-606)||(10627046-10627101)
chr1 (553-606)||(13488556-13488611)
chr1 (553-606)||(15391272-15391327)
chr1 (553-606)||(20411619-20411674)
chr1 (553-606)||(28678150-28678205)
chr1 (553-606)||(37822365-37822420)
chr1 (553-606)||(42490939-42490994)
chr1 (557-606)||(44517197-44517248)
chr1 (553-605)||(45193647-45193701)
chr1 (561-606)||(18343668-18343715)
chr1 (553-606)||(29205331-29205386)
chr1 (553-606)||(45750524-45750579)
chr1 (19-73)||(3121413-3121467)
chr1 (559-606)||(15791295-15791344)
chr1 (30-63)||(7583422-7583455)
chr1 (560-606)||(51418066-51418114)
chr1 (553-606)||(4871046-4871101)
chr1 (557-606)||(14265334-14265385)
chr1 (553-606)||(33487050-33487105)
chr1 (20-60)||(36021053-36021093)
[»] scaffold0056 (1 HSPs)
scaffold0056 (553-605)||(74210-74264)
[»] scaffold1350 (1 HSPs)
scaffold1350 (553-606)||(1620-1675)
[»] scaffold0001 (1 HSPs)
scaffold0001 (553-606)||(404278-404333)
[»] scaffold0536 (1 HSPs)
scaffold0536 (553-605)||(2948-3002)
[»] scaffold0432 (1 HSPs)
scaffold0432 (556-607)||(2437-2489)
[»] scaffold0294 (1 HSPs)
scaffold0294 (557-606)||(4087-4138)
[»] scaffold0121 (1 HSPs)
scaffold0121 (553-606)||(13265-13320)


Alignment Details
Target: chr5 (Bit Score: 147; Significance: 3e-77; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 441 - 606
Target Start/End: Complemental strand, 11735005 - 11734839
Alignment:
Q  441 aattttgcatggaaaaaactagctgaaag-atataattatgtgcttaacaggtctgatggcagagaataatccattagacaatagtaaacaatcataaat 539  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11735005 aattttgcatggaaaaaactagctgaaaggatataattatgtgcttaataggtctgatggcagagaataatccatcagacaatagtaaacaatcataaat 11734906  T
Q  540 aactcatagctatattgaataagtgatttcacatattttcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11734905 aactcatagctatattgaataagtgatttcacatattttcttttctttagtttgcttttgtgatttc 11734839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 12891722 - 12891777
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  12891722 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 12891777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 17331374 - 17331429
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  17331374 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 17331429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 28040675 - 28040730
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  28040675 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 28040730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 33164543 - 33164488
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  33164543 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 33164488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 34431106 - 34431161
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  34431106 attgaataagtgatttcacatattttctgttttctttcgtttgattttgtgatttc 34431161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 39179903 - 39179848
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  39179903 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 39179848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 6681949 - 6681896
Alignment:
Q  553 attgaataagtgatttcacatattttcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||| |||||    
T  6681949 attgaataagtgatttcacatattttcaattctttcgtttgtttttgtaatttc 6681896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 178181 - 178126
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  | |||||||||||||| ||||||||||||    
T  178181 attgaataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttc 178126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 3740403 - 3740458
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| || |||||||||    
T  3740403 attgaataagtgatttcacatattttctgttttctttcgtttgtttgtgtgatttc 3740458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 6281090 - 6281145
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||| ||||||||||  |||||||||||||| ||||||||||||    
T  6281090 attgaataagtgattttacatattttctattttctttcgtttgtttttgtgatttc 6281145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 6635296 - 6635351
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||| ||||| ||||||||||||    
T  6635296 attgaataagtgatttcacatattttctgttttctttagtttgtttttgtgatttc 6635351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 17699599 - 17699654
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||    
T  17699599 attgaataagtgatttcacatcttttctgttttctttcgtttgtttttgtgatttc 17699654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 27241110 - 27241165
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||||| |||||    
T  27241110 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtaatttc 27241165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 29097835 - 29097890
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||| ||||| ||||||||||||    
T  29097835 attgaataagtgatttcacatattttctgttttctttagtttgtttttgtgatttc 29097890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 32347789 - 32347734
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||| ||||||||| ||||||||||||    
T  32347789 attgaataagtgatttcacatattttctgttttatttcgtttgtttttgtgatttc 32347734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 17096314 - 17096260
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  ||| |||||||||| |||||||||||    
T  17096314 attgaataagtgatttcacatattttctgtttcctttcgtttgtttttgtgattt 17096260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 42609190 - 42609244
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  |||||||| ||||| |||||||||||    
T  42609190 attgaataagtgatttcacatattttctattttcttttgtttgtttttgtgattt 42609244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 43493918 - 43493972
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgattt 605  Q
    ||||||||||||||||||||||  |||| |||||||||||||| |||||||||||    
T  43493918 attgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgattt 43493972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 39531478 - 39531424
Alignment:
Q  553 attgaataagtgatttcacatattt-tcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||    
T  39531478 attgaataagtgatttcacatatttctgttttcttttgtttgtttttgtgatttc 39531424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 17687251 - 17687306
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||| |||||||||||||||  |||||||| ||||| ||||||||||||    
T  17687251 attgaataagttatttcacatattttcagttttcttttgtttgtttttgtgatttc 17687306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 18653828 - 18653883
Alignment:
Q  553 attgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||  |||||||||  ||||||||||||| ||||||||||||    
T  18653828 attgaataagtgatttcgtatattttctgatttctttcgtttgtttttgtgatttc 18653883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 3079380 - 3079326
Alignment:
Q  553 attgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||| |||||||||||  ||| ||||||||| |||||||||||    
T  3079380 attgaataagtgatttaacatattttctgctttttttcgtttgtttttgtgattt 3079326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 554 - 606
Target Start/End: Complemental strand, 12439708 - 12439654
Alignment:
Q  554 ttgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||| ||||||| |  ||||||||||||| ||||||||||||    
T  12439708 ttgaataagtgatttcatatattttttgttttctttcgtttgtttttgtgatttc 12439654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 554 - 606
Target Start/End: Original strand, 20483233 - 20483287
Alignment:
Q  554 ttgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||||  |||| ||| ||||| ||||||||||||    
T  20483233 ttgaataagtgatttcacatattttctgttttgttttgtttgtttttgtgatttc 20483287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 10350519 - 10350439
Alignment:
Q  27 tagtaaaaataaactataagctcgtaagaaaatgacaattataaaacatgtc-cttttagtcaaataaacttataaaacat 106  Q
    ||||||||||||  |||||||  |||||||| ||||| |||| ||||| |||  |||||||||||| ||||||||| ||||    
T  10350519 tagtaaaaataagttataagcctgtaagaaagtgacacttatcaaacaagtcttttttagtcaaatgaacttataagacat 10350439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 23882191 - 23882136
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||| ||||||||  | |||||| ||||||| ||||||||||||    
T  23882191 attgaataagtgatttgacatattttatattttctatcgtttgtttttgtgatttc 23882136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 32882740 - 32882704
Alignment:
Q  31 aaaaataaactataagctcgtaagaaaatgacaatta 67  Q
    |||||||| |||||||||||| |||||||||||||||    
T  32882740 aaaaataagctataagctcgtgagaaaatgacaatta 32882704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 42396587 - 42396532
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||| |||||||||||  |||| ||||||||| |||| ||||||||||||    
T  42396587 attgaataagcgatttcacatattttttgttttctttcatttgtttttgtgatttc 42396532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 5684411 - 5684466
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  5684411 attgaataagtgatttcacatattttctgttttctttcgtttgcttttgtgatttc 5684466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 5709461 - 5709516
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  5709461 attgaataagtgatttcacatattttctgttttctttcgtttgcttttgtgatttc 5709516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 10094487 - 10094542
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  10094487 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 10094542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 15674687 - 15674632
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  15674687 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 15674632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 42603844 - 42603789
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  42603844 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 42603789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 28664987 - 28664933
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||||||||||    
T  28664987 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattt 28664933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 1281212 - 1281157
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||    
T  1281212 attgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttc 1281157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 11833065 - 11833120
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  | |||||||||||| ||||||||||||    
T  11833065 attgaataagtgatttcacatattttctgtattctttcgtttgtttttgtgatttc 11833120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 21990708 - 21990763
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||| |||  |||||||||||||| ||||||||||||    
T  21990708 attgaataagtgatttcacatatattctgttttctttcgtttgtttttgtgatttc 21990763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 42644722 - 42644777
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  42644722 attgaataagtgatttcacatattctctgttttctttcgtttgtttttgtgatttc 42644777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 24887936 - 24887849
Alignment:
Q  21 ataaactagtaaaaataaactataagctcgtaagaaaatgacaattataaaacatgtccttttagtcaaataaacttataaaacataa 108  Q
    |||||||||||||||||   ||||||||||| | ||| |||| ||||| ||||||  | ||||| |||||||||||||||| ||||||    
T  24887936 ataaactagtaaaaataggttataagctcgtcaaaaagtgacgattatcaaacatacctttttaatcaaataaacttataagacataa 24887849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 9720049 - 9719993
Alignment:
Q  553 attgaataagtgatttcacatattttc---ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||   |||| ||||||||| ||||||||||||    
T  9720049 attgaataagtgatttcacatattttctgtttttttttcgtttgtttttgtgatttc 9719993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 32643058 - 32643113
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||| ||||||||||||||||||||  |||||||| ||||| ||||||||||||    
T  32643058 attgaacaagtgatttcacatattttctgttttcttttgtttgtttttgtgatttc 32643113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 39533050 - 39532995
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||| ||||| ||| ||||||||    
T  39533050 attgaataagtgatttcacatattttctgttttcttttgtttgttttcgtgatttc 39532995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 43847116 - 43847171
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  ||||| |||||||| ||| ||||||||    
T  43847116 attgaataagtgatttcacatattttctgttttccttcgtttgttttggtgatttc 43847171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 45457631 - 45457576
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  | |||||||||||||| ||| ||||||||    
T  45457631 attgaataagtgatttcacatattttatgttttctttcgtttgttttcgtgatttc 45457576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 3266434 - 3266488
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  ||| |||||||||  |||||||||||    
T  3266434 attgaataagtgatttcacatattttctgtttcctttcgtttatttttgtgattt 3266488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 17473798 - 17473744
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  ||| ||||| |||| |||||||||||    
T  17473798 attgaataagtgatttcacatattttctgtttcctttcatttgtttttgtgattt 17473744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 17579416 - 17579470
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  ||| ||||| |||| |||||||||||    
T  17579416 attgaataagtgatttcacatattttctgtttcctttcatttgtttttgtgattt 17579470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 21603508 - 21603562
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||| ||  ||||||||| |||| |||||||||||    
T  21603508 attgaataagtgatttcacatattctctgttttctttcctttgtttttgtgattt 21603562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 2622638 - 2622693
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||| |||||| ||||||||  ||||||| |||||| ||||||||||||    
T  2622638 attgaataagtaatttcagatattttctgttttcttgcgtttgtttttgtgatttc 2622693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 566 - 607
Target Start/End: Complemental strand, 6646652 - 6646609
Alignment:
Q  566 tttcacatattttc--ttttctttcgtttgcttttgtgatttct 607  Q
    ||||||||||||||  |||||||||||||| |||||||||||||    
T  6646652 tttcacatattttcagttttctttcgtttgattttgtgatttct 6646609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 9785363 - 9785418
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||  |||| |||||||| ||||  ||||||||||||    
T  9785363 attgaataagtgatttcacatattttttgttttcttttgtttatttttgtgatttc 9785418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 10574427 - 10574482
Alignment:
Q  553 attgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||||||||  ||||| |||||||||||  ||||||||||||| ||||||||||||    
T  10574427 attgaataaacgattttacatattttctgttttctttcgtttgtttttgtgatttc 10574482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 24320294 - 24320243
Alignment:
Q  557 aataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||  |||| |||||||| ||||| ||||||||||||    
T  24320294 aataagtgatttcacatattttttgttttcttttgtttgtttttgtgatttc 24320243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 606
Target Start/End: Original strand, 26161038 - 26161081
Alignment:
Q  565 atttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||    
T  26161038 atttcacatattttctgttttctttcgtttgtttttgtgatttc 26161081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 32740799 - 32740854
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||  |||| ||||||||||||   ||||||||||||    
T  32740799 attgaataagtgatttcacatattttttgttttctttcgttgatttttgtgatttc 32740854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 15590154 - 15590099
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  15590154 attgaataagtgatttcacatattttctgttttctttcgtttgcttttgtgatttc 15590099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 2304885 - 2304830
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  2304885 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 2304830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 12481445 - 12481390
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  12481445 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 12481390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 6296324 - 6296269
Alignment:
Q  553 attgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||| |||||||||||||||  ||||||||||||| ||||||||||||    
T  6296324 attgaataagtggtttcacatattttctagtttctttcgtttgtttttgtgatttc 6296269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 6303134 - 6303079
Alignment:
Q  553 attgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||| |||||||||||||||  ||||||||||||| ||||||||||||    
T  6303134 attgaataagtggtttcacatattttctagtttctttcgtttgtttttgtgatttc 6303079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 19402883 - 19402828
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||| ||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  19402883 attgaacaagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 19402828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 4921956 - 4921902
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  |||| ||||||||| |||||||||||    
T  4921956 attgaataagtgatttcacatattttcagttttatttcgtttgtttttgtgattt 4921902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 8693732 - 8693678
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||||| ||||    
T  8693732 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtcattt 8693678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 554 - 605
Target Start/End: Complemental strand, 21507882 - 21507829
Alignment:
Q  554 ttgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||  |||| |||||||||||||| |||||||||||    
T  21507882 ttgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgattt 21507829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 31937494 - 31937440
Alignment:
Q  553 attgaataagtgatttcacatattttct-tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||||||  || ||||||||| ||||||||||||    
T  31937494 attgaataagtgatttcacatattttctgattttttcgtttgtttttgtgatttc 31937440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 560 - 606
Target Start/End: Original strand, 4393823 - 4393871
Alignment:
Q  560 aagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  4393823 aagtgatttcacatattttcttttttctttcgtttgtttttgtgatttc 4393871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 6419933 - 6419878
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||  |||| ||||||||| |||| ||||||||||||    
T  6419933 attgaataagtgatttcacatattttttgttttctttcatttgtttttgtgatttc 6419878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 23638193 - 23638138
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  ||||||||||||||  ||||| |||||    
T  23638193 attgaataagtgatttcacatattttctgttttctttcgtttgtgtttgtaatttc 23638138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 31705211 - 31705266
Alignment:
Q  553 attgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||| | ||||||||||||||||  |||||| |||||||||||||||||||    
T  31705211 attgaataaataatttcacatattttctattttcttccgtttgcttttgtgatttc 31705266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 606
Target Start/End: Original strand, 23654298 - 23654351
Alignment:
Q  555 tgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||  |||| |||| ||||||||| ||||||||||||    
T  23654298 tgaataagtgatttcacatattttttgttttatttcgtttgtttttgtgatttc 23654351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 559 - 605
Target Start/End: Complemental strand, 29927163 - 29927115
Alignment:
Q  559 taagtgatttcacatattttct--tttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||| |||||||  ||||||||||||| |||||||||||    
T  29927163 taagtgatttcacaaattttctgttttctttcgtttgtttttgtgattt 29927115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 41868377 - 41868322
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  41868377 attgaataagtgatttcacatattttctgttttctttcgtttgcttttgtgatttc 41868322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 34103800 - 34103745
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  34103800 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 34103745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 40013355 - 40013300
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  40013355 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 40013300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 48652523 - 48652468
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  48652523 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 48652468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 54239101 - 54239046
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  54239101 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 54239046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 13702055 - 13702000
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  ||||||||| |||| ||||||||||||    
T  13702055 attgaataagtgatttcacatattttctgttttctttcatttgtttttgtgatttc 13702000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 14585508 - 14585563
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||| ||||| ||||||||||||    
T  14585508 attgaataagtgatttcacatattttctgttttcttttgtttgtttttgtgatttc 14585563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 22485011 - 22485066
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||    
T  22485011 attgaataagtgatttcgcatattttctgttttctttcgtttgtttttgtgatttc 22485066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 34960941 - 34960886
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  | |||||||||||||| ||||||||||||    
T  34960941 attgaataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttc 34960886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 35174750 - 35174805
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||    
T  35174750 attgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttc 35174805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 36691882 - 36691827
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  ||| |||||||||| ||||||||||||    
T  36691882 attgaataagtgatttcacatattttctgtttcctttcgtttgtttttgtgatttc 36691827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 40883951 - 40883896
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||| |||||||  |||||||||||||| ||||||||||||    
T  40883951 attgaataagtgatttcacttattttctgttttctttcgtttgtttttgtgatttc 40883896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 32080837 - 32080783
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||| ||||||||||||||||||  |||||||||||||| |||||||||||    
T  32080837 attgaataggtgatttcacatattttctgttttctttcgtttgtttttgtgattt 32080783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 554 - 606
Target Start/End: Complemental strand, 49628169 - 49628115
Alignment:
Q  554 ttgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||  |||| |||||||||||||| ||||||||||||    
T  49628169 ttgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttc 49628115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 3312489 - 3312544
Alignment:
Q  553 attgaataagtgatttcacatatttt--cttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||||   |||||||||||||| |||||| |||||    
T  3312489 attgaataagtgatttcacatattttaagttttctttcgtttgtttttgttatttc 3312544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 11819129 - 11819184
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  | ||||||||| |||| ||||||||||||    
T  11819129 attgaataagtgatttcacatattttatgttttctttcatttgtttttgtgatttc 11819184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 31270372 - 31270427
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  | |||||||||||||| |||||| |||||    
T  31270372 attgaataagtgatttcacatattttatgttttctttcgtttgtttttgtaatttc 31270427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 31462829 - 31462774
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||| ||||||||||  |||||||| ||||| ||||||||||||    
T  31462829 attgaataagtgattttacatattttctgttttcttttgtttgtttttgtgatttc 31462774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 36624773 - 36624722
Alignment:
Q  557 aataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||  |||||||| ||||| ||||||||||||    
T  36624773 aataagtgatttcacatattttctgttttcttttgtttgtttttgtgatttc 36624722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 38527309 - 38527364
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||| |||||||||||||||||  |||||||||||||| |||| |||||||    
T  38527309 attgaataaatgatttcacatattttctgttttctttcgtttgtttttatgatttc 38527364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 606
Target Start/End: Original strand, 48400949 - 48401000
Alignment:
Q  557 aataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||| |  ||||||||||||| ||||||||||||    
T  48400949 aataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttc 48401000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 39610258 - 39610312
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgattt 605  Q
    ||||||||||||||||||||||  |||| ||| |||||||||| |||||||||||    
T  39610258 attgaataagtgatttcacatattttttgtttcctttcgtttgtttttgtgattt 39610312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 19861363 - 19861307
Alignment:
Q  553 attgaataagtgatttcacatattttc---ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||| |   |||| ||||||||| ||||||||||||    
T  19861363 attgaataagtgatttcacatatttcctgtttttttttcgtttgtttttgtgatttc 19861307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 37083880 - 37083834
Alignment:
Q  17 tgctataaactagtaaaaataaactataagctcgtaagaaaatgaca 63  Q
    |||||||| ||||||||||||| |||||||||||| ||||| |||||    
T  37083880 tgctataagctagtaaaaataagctataagctcgtgagaaagtgaca 37083834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 557 - 604
Target Start/End: Complemental strand, 55090662 - 55090613
Alignment:
Q  557 aataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatt 604  Q
    |||||||||||||||||||||||  ||||||||| |||| ||||||||||    
T  55090662 aataagtgatttcacatattttctgttttctttcatttgtttttgtgatt 55090613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 2147772 - 2147828
Alignment:
Q  553 attgaataagtgatttc-acatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||| ||||||||||  ||||||||| |||| ||||||||||||    
T  2147772 attgaataagtgatttccacatattttcagttttctttcatttgtttttgtgatttc 2147828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 3456989 - 3457044
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||| |||||  |||| ||||||||| |||| ||||||||||||    
T  3456989 attgaataagtgatttaacatattttttgttttctttcctttgtttttgtgatttc 3457044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 4206594 - 4206539
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||| |||||||||  |||| |||||||| ||||| ||||||||||||    
T  4206594 attgaataagtgttttcacatattttttattttcttttgtttgtttttgtgatttc 4206539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 33637449 - 33637504
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||  ||||||||||||||||  |||||||||||||  ||||||||||||    
T  33637449 attgaataaaagatttcacatattttctgttttctttcgtttatttttgtgatttc 33637504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 53155509 - 53155458
Alignment:
Q  557 aataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||  | |||||||||||||| |||||| |||||    
T  53155509 aataagtgatttcacatattttatgttttctttcgtttgtttttgtaatttc 53155458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 553 - 607
Target Start/End: Original strand, 6911726 - 6911782
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttct 607  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||||||||||||    
T  6911726 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttct 6911782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 7083891 - 7083836
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  7083891 attgaataagtgatttcacatattttctattttctttcgtttgtttttgtgatttc 7083836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 11210388 - 11210333
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  11210388 attgaataagtgatttcacatatttactcttttctttcgtttgtttttgtgatttc 11210333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 24611874 - 24611819
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  24611874 attgaataagtgatttcacatattttctattttttttcgtttgcttttgtgatttc 24611819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 24825695 - 24825750
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  24825695 attgaataagtgatttcacatattttctattttctttcgtttgtttttgtgatttc 24825750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 29268852 - 29268797
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  29268852 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 29268797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 30202084 - 30202139
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  30202084 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 30202139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 43244456 - 43244402
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||||||||||    
T  43244456 attgaataagtgatttcacatattttcgattttctttcgtttgtttttgtgattt 43244402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 36124422 - 36124369
Alignment:
Q  553 attgaataagtgatttcacatattttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||| | |||||||||||||||| |||||||||||||| ||||||||||||    
T  36124422 attgaatgattgatttcacatattttgttttctttcgtttgtttttgtgatttc 36124369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 606
Target Start/End: Complemental strand, 38944221 - 38944168
Alignment:
Q  554 ttgaataagtgatttcacata-ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||    
T  38944221 ttgaataagtgatttcacatatttttgttttctttcgtttgtttttgtgatttc 38944168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 557 - 606
Target Start/End: Original strand, 6882006 - 6882057
Alignment:
Q  557 aataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  6882006 aataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 6882057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 7060370 - 7060425
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  | |||||||||||||| ||||||||||||    
T  7060370 attgaataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttc 7060425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 8517531 - 8517476
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||| ||||||||||  |||||||||||||| ||||||||||||    
T  8517531 attgaataagtgattttacatattttctgttttctttcgtttgtttttgtgatttc 8517476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 26674418 - 26674473
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||    
T  26674418 attgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttc 26674473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 39837641 - 39837696
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||| |||||||    
T  39837641 attgaataagtgatttcacatattttctgttttctttcgtttgtttttttgatttc 39837696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 50801263 - 50801318
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||  ||||||||||||    
T  50801263 attgaataagtgatttcacatattttctgttttctttcgtttatttttgtgatttc 50801318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 26742538 - 26742484
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||| |||||||    
T  26742538 attgaataagtgatttcacatattttctgttttctttcgtttgttttcgtgattt 26742484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 554 - 606
Target Start/End: Complemental strand, 45351144 - 45351090
Alignment:
Q  554 ttgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||||  |||| ||||||||| ||||||||||||    
T  45351144 ttgaataagtgatttcacatattttctgttttgtttcgtttgtttttgtgatttc 45351090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 554 - 606
Target Start/End: Complemental strand, 45360623 - 45360569
Alignment:
Q  554 ttgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||||  |||| ||||||||| ||||||||||||    
T  45360623 ttgaataagtgatttcacatattttctgttttgtttcgtttgtttttgtgatttc 45360569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 13586316 - 13586260
Alignment:
Q  553 attgaataagtgatttcacatattttc---ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||   |||| ||||||||| ||||||||||||    
T  13586316 attgaataagtgatttcacatattttctgtttttttttcgtttgtttttgtgatttc 13586260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 626623 - 626569
Alignment:
Q  553 attgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||||    
T  626623 attgaataagtgatt-cacatattttctgttttctttcgtttgtttttgtgatttc 626569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 5814393 - 5814448
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||| ||||||||||||||   |||||||||||||| ||||||||||||    
T  5814393 attgaataagttatttcacatatttttagttttctttcgtttgtttttgtgatttc 5814448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 13965606 - 13965661
Alignment:
Q  553 attgaataagtgatttcacatat--tttcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||  | | |||||||||||||| ||||||||||||    
T  13965606 attgaataagtgatttcacatattctatgttttctttcgtttgtttttgtgatttc 13965661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 20399978 - 20399923
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||| ||||||||  |||||||||||||  ||||||||||||    
T  20399978 attgaataagtgatttcatatattttctgttttctttcgtttatttttgtgatttc 20399923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 22757140 - 22757195
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  | |||| ||||||||| ||||||||||||    
T  22757140 attgaataagtgatttcacatattttatgttttttttcgtttgtttttgtgatttc 22757195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 606
Target Start/End: Original strand, 25658217 - 25658268
Alignment:
Q  557 aataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||  ||||||||||| || ||||||||||||    
T  25658217 aataagtgatttcacatattttctgttttctttcgtatgtttttgtgatttc 25658268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 39523455 - 39523510
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||| |||||  |||||||||||||| |||| |||||||    
T  39523455 attgaataagtgatttcacatgttttctgttttctttcgtttgtttttatgatttc 39523510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 44757117 - 44757062
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  | |||||||||||||| |||| |||||||    
T  44757117 attgaataagtgatttcacatattttatgttttctttcgtttgtttttatgatttc 44757062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 606
Target Start/End: Original strand, 51152175 - 51152225
Alignment:
Q  557 aataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  51152175 aataagtgatttcacatattttctgctttctttcgtttg-ttttgtgatttc 51152225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 554 - 606
Target Start/End: Original strand, 8712577 - 8712631
Alignment:
Q  554 ttgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||| |||||||||||||||||||| |  ||||||||||||| ||||||||||||    
T  8712577 ttgagtaagtgatttcacatattttttgttttctttcgtttgtttttgtgatttc 8712631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 29922883 - 29922937
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  ||| ||||||| || |||||||||||    
T  29922883 attgaataagtgatttcacatattttctatttcctttcgtctgtttttgtgattt 29922937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 7861276 - 7861226
Alignment:
Q  557 aataagtgatttcacatattttct-tttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||| ||| |||| |||| ||||||||||||    
T  7861276 aataagtgatttcacatattttctgtttttttcatttgtttttgtgatttc 7861226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 557 - 607
Target Start/End: Complemental strand, 12717189 - 12717136
Alignment:
Q  557 aataagtgatttc-acatattttc--ttttctttcgtttgcttttgtgatttct 607  Q
    ||||||||||||| ||||||||||  |||||||||||||| |||||||||||||    
T  12717189 aataagtgatttccacatattttcagttttctttcgtttgtttttgtgatttct 12717136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 3535200 - 3535111
Alignment:
Q  18 gctataaactagtaaaaataaactataagctcgtaagaaaatgacaattataaaacatgtccttttagtcaaataaacttataaaacata 107  Q
    |||||||  |||||||||||| |||||| |||| || ||| ||||  |||  ||||||||| ||| |||||||| ||||||||| |||||    
T  3535200 gctataagttagtaaaaataagctataaactcgcaataaagtgactgttaccaaacatgtcttttcagtcaaatgaacttataagacata 3535111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 24100185 - 24100235
Alignment:
Q  553 attgaataagtgatttcacatattttc----ttttctttcgtttgcttttg 599  Q
    |||||||||||||||||||||||||||    |||||||||||||| |||||    
T  24100185 attgaataagtgatttcacatattttctctgttttctttcgtttgtttttg 24100235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 39276385 - 39276332
Alignment:
Q  20 tataaactagtaaaaataaactataagctcgtaagaaaatgacaattataaaac 73  Q
    ||||| |||||||||||||  ||||||||||| ||||||||||| |||| ||||    
T  39276385 tataagctagtaaaaataagttataagctcgtgagaaaatgacagttatcaaac 39276332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 478087 - 478032
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||| ||||||||||  ||| |||||||||  ||||||||||||    
T  478087 attgaataagtgattttacatattttctgtttcctttcgtttatttttgtgatttc 478032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 598
Target Start/End: Original strand, 19745435 - 19745482
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgctttt 598  Q
    ||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  19745435 attgaataattgatttcacatattttctgttttctttcgtttgttttt 19745482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 19794371 - 19794324
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgctttt 598  Q
    ||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  19794371 attgaataattgatttcacatattttctgttttctttcgtttgttttt 19794324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 20887826 - 20887776
Alignment:
Q  557 aataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||| ||||||  ||||||||||||| ||||||||||||    
T  20887826 aataagtgatttcacat-ttttctgctttctttcgtttgtttttgtgatttc 20887776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 24568788 - 24568733
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||| ||||||| ||  |||| ||||||||| ||||||||||||    
T  24568788 attgaataagtgattttacatattatctgttttatttcgtttgtttttgtgatttc 24568733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 43493362 - 43493307
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||  |||| |||||||| ||||  ||||||||||||    
T  43493362 attgaataagtgatttcacatattttttgttttcttttgtttatttttgtgatttc 43493307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 1161 - 1106
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  1161 attgaataagtgatttcacatattttcagttttctttcgtttgtttttgtgatttc 1106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 21 - 76
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||  |||| |||||||| ||||  ||||||||||||    
T  21 attgaataagtgatttcacatattttttgttttcttttgtttatttttgtgatttc 76  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 7199 - 7144
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  7199 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 7144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 6183 - 6238
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  6183 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 6238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 7579938 - 7579883
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  7579938 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 7579883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 9501636 - 9501691
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  9501636 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 9501691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 30026963 - 30026908
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  30026963 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 30026908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 41361778 - 41361832
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||||||||||    
T  41361778 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattt 41361832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 10338905 - 10338850
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||    
T  10338905 attgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttc 10338850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 14600781 - 14600726
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||| |||||||||||||||||  |||||||||||||| ||||||||||||    
T  14600781 attgaataactgatttcacatattttctgttttctttcgtttgtttttgtgatttc 14600726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 31202504 - 31202559
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||| ||||||||| ||||||||||||    
T  31202504 attgaataagtgatttcacatattttctgttttgtttcgtttgtttttgtgatttc 31202559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 31308194 - 31308249
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  | |||||||||||||| ||||||||||||    
T  31308194 attgaataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttc 31308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 39067768 - 39067717
Alignment:
Q  557 aataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  39067768 aataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 39067717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 554 - 606
Target Start/End: Complemental strand, 2234552 - 2234498
Alignment:
Q  554 ttgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||  |||| |||||||||||||| ||||||||||||    
T  2234552 ttgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttc 2234498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 554 - 606
Target Start/End: Original strand, 37612700 - 37612754
Alignment:
Q  554 ttgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||  |||| |||||||||||||| ||||||||||||    
T  37612700 ttgaataagtgatttcacatattttttattttctttcgtttgtttttgtgatttc 37612754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 12329672 - 12329728
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcg-tttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||    
T  12329672 attgaataagtgatttcacatattttctgttttctttcgttttgtttttgtgatttc 12329728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 554 - 604
Target Start/End: Original strand, 22787539 - 22787591
Alignment:
Q  554 ttgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatt 604  Q
    ||||||||||||||| ||||||||||  |||||||||||||| ||||||||||    
T  22787539 ttgaataagtgatttaacatattttctgttttctttcgtttgtttttgtgatt 22787591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 1810299 - 1810248
Alignment:
Q  557 aataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||| ||||||  ||||||||||||| ||||||||||||    
T  1810299 aataagtgatttcacattttttctgatttctttcgtttgtttttgtgatttc 1810248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 11161928 - 11161983
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||| ||||||||| |||||  |||||||||||||| ||||||||||||    
T  11161928 attgaataagtcatttcacatcttttcagttttctttcgtttgtttttgtgatttc 11161983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 13570805 - 13570754
Alignment:
Q  557 aataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||  |||| ||||||||| ||||||||||||    
T  13570805 aataagtgatttcacatattttctattttttttcgtttgtttttgtgatttc 13570754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 606
Target Start/End: Original strand, 24699882 - 24699933
Alignment:
Q  557 aataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||| |||||    
T  24699882 aataagtgatttcacatattttctgttttctttcatttgcttttgtaatttc 24699933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 24791247 - 24791196
Alignment:
Q  557 aataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||| |||||||||||  ||||||||||||| ||||||||||||    
T  24791247 aataagtgatttaacatattttctgttttctttcgtttgtttttgtgatttc 24791196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 554 - 606
Target Start/End: Complemental strand, 37128568 - 37128514
Alignment:
Q  554 ttgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||  |||| |||||||||||||| |||||| |||||    
T  37128568 ttgaataagtgatttcacatattttttgttttctttcgtttgtttttgtaatttc 37128514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 604
Target Start/End: Original strand, 10147993 - 10148046
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatt 604  Q
    |||||||||||||||||||||||||||  ||| |||||||||| ||||| ||||    
T  10147993 attgaataagtgatttcacatattttctgtttcctttcgtttgtttttgagatt 10148046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 2025292 - 2025237
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||| |||||  |||| ||||||||  ||||||||||||    
T  2025292 attgaataagtgatttcacatgttttctgttttatttcgtttatttttgtgatttc 2025237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 606
Target Start/End: Complemental strand, 3204831 - 3204784
Alignment:
Q  561 agtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||  |||||||||||||| || |||||||||    
T  3204831 agtgatttcacatattttctgttttctttcgtttgtttatgtgatttc 3204784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 15288877 - 15288826
Alignment:
Q  557 aataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||| |||||||||| ||||||||  ||||||||||||| ||||||||||||    
T  15288877 aatacgtgatttcacttattttctgttttctttcgtttgtttttgtgatttc 15288826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 15469246 - 15469195
Alignment:
Q  557 aataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||| |||||||||| ||||||||  ||||||||||||| ||||||||||||    
T  15469246 aatacgtgatttcacttattttctgttttctttcgtttgtttttgtgatttc 15469195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 23971177 - 23971125
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||  | ||||||||||||||  ||||||||||    
T  23971177 attgaataagtgatttcacatattttatgttttctttcgtttg--tttgtgattt 23971125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 10287081 - 10287026
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  10287081 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 10287026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 38535380 - 38535325
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  38535380 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 38535325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 12704733 - 12704787
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||||||||||    
T  12704733 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattt 12704787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 5701269 - 5701220
Alignment:
Q  18 gctataaactagtaaaaataaactataagctcgtaagaaaatgacaatta 67  Q
    |||||||||||||||||||||||||||||||||| || || |||||||||    
T  5701269 gctataaactagtaaaaataaactataagctcgtgagtaagtgacaatta 5701220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 604
Target Start/End: Complemental strand, 28231171 - 28231119
Alignment:
Q  554 ttgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatt 604  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  28231171 ttgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatt 28231119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 4604382 - 4604327
Alignment:
Q  553 attgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  4604382 attgaataagtgatttcacatattttctgctttctttcgattgtttttgtgatttc 4604327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 9978744 - 9978689
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||| |||||||||||||||||  |||||||||||||| ||||||||||||    
T  9978744 attgaataaatgatttcacatattttctgttttctttcgtttgtttttgtgatttc 9978689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 13740735 - 13740680
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||    
T  13740735 attgaataagtgatttcatatattttctgttttctttcgtttgtttttgtgatttc 13740680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 25067898 - 25067953
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||  ||||||||||||    
T  25067898 attgaataagtgatttcacatattttctgttttctttcgtttctttttgtgatttc 25067953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 27095751 - 27095806
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||    
T  27095751 attgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttc 27095806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 33012123 - 33012178
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||| ||||||||| ||||||||||||    
T  33012123 attgaataagtgatttcacatattttcagttttgtttcgtttgtttttgtgatttc 33012178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 35333551 - 35333606
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||  ||||||||||||    
T  35333551 attgaataagtgatttcacatattttctgttttctttcgtttatttttgtgatttc 35333606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 43474203 - 43474148
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||| ||||||  |||||||||||||| ||||||||||||    
T  43474203 attgaataagtgatttcacaaattttctgttttctttcgtttgtttttgtgatttc 43474148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 554 - 606
Target Start/End: Complemental strand, 31908890 - 31908836
Alignment:
Q  554 ttgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||||  |||||||||||||| |||| |||||||    
T  31908890 ttgaataagtgatttcacatattttctgttttctttcgtttgtttttctgatttc 31908836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 32314488 - 32314542
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    ||||||||| |||||||||||||||||  |||||||||||||| |||||||||||    
T  32314488 attgaataaatgatttcacatattttctgttttctttcgtttgtttttgtgattt 32314542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 15919920 - 15919974
Alignment:
Q  553 attgaataagtgatttcacatattttc-ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||| |||||||||||||||||  ||||||||||||| ||||||||||||    
T  15919920 attgaataaatgatttcacatattttcaatttctttcgtttgtttttgtgatttc 15919974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 560 - 606
Target Start/End: Complemental strand, 12891187 - 12891139
Alignment:
Q  560 aagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  12891187 aagtgatttcacatattttctattttctttcgtttgtttttgtgatttc 12891139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 20561204 - 20561152
Alignment:
Q  556 gaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||||||    
T  20561204 gaataagtggtttcacatattttctgttttctttcgtttgtttttgtgatttc 20561152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 553 - 607
Target Start/End: Complemental strand, 28261963 - 28261907
Alignment:
Q  553 attgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttct 607  Q
    |||||||| ||||||| |||||||||||  ||||||||||||| |||||||||||||    
T  28261963 attgaatatgtgattttacatattttctgttttctttcgtttgtttttgtgatttct 28261907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 34416836 - 34416781
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||| ||| ||||| ||||||||||||    
T  34416836 attgaataagtgatttcacatattttcagtttttttttgtttgtttttgtgatttc 34416781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 42139417 - 42139325
Alignment:
Q  18 gctataaactagtaaaaataaactataagctcgtaagaaaatgacaattataaaacatgtcctttt-agtcaaataaacttataaaacataag 109  Q
    ||||||| ||| ||||||||| ||||||||| || ||||| |||||||||  ||||||||  |||| |||||||| | ||||||| |||||||    
T  42139417 gctataagctaataaaaataagctataagcttgtgagaaagtgacaattaccaaacatgtattttttagtcaaatgagcttataagacataag 42139325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 44942331 - 44942386
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  | |||||||| ||||| ||||||||||||    
T  44942331 attgaataagtgatttcacatattttatgttttcttttgtttgtttttgtgatttc 44942386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 13879081 - 13879027
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  ||| |||||||||  |||||||||||    
T  13879081 attgaataagtgatttcacatattttctgtttcctttcgtttatttttgtgattt 13879027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 14019206 - 14019152
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  ||| |||||||||  |||||||||||    
T  14019206 attgaataagtgatttcacatattttctgtttcctttcgtttatttttgtgattt 14019152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 4732117 - 4732171
Alignment:
Q  553 attgaataagtgatttcacata-ttttcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||| ||||  ||| ||||||||| ||||||||||||    
T  4732117 attgaataagtgatttcacatactttttgtttttttcgtttgtttttgtgatttc 4732171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 17268199 - 17268146
Alignment:
Q  553 attgaataagtgatttcacatattttct-tttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||||    
T  17268199 attgaataagtgatttcacatattttctgttttttttgtttg-ttttgtgatttc 17268146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 600
Target Start/End: Original strand, 34471012 - 34471061
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgt 600  Q
    ||||||| |||||||||||||||||||  |||||||||||||| ||||||    
T  34471012 attgaatcagtgatttcacatattttctattttctttcgtttgtttttgt 34471061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 4426733 - 4426678
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||| |||||||||||||||||  ||||||||| |||| |||| |||||||    
T  4426733 attgaataaatgatttcacatattttctgttttctttcatttgtttttttgatttc 4426678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 7073023 - 7072968
Alignment:
Q  553 attgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||| | |||||| |||||||  ||||||||||||| ||||||||||||    
T  7073023 attgaataagtaacttcacaaattttctgttttctttcgtttgtttttgtgatttc 7072968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 9690048 - 9689993
Alignment:
Q  553 attgaataagtgatttcacata--ttttcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||| |||||||  |||| |||| ||||||||| ||||||||||||    
T  9690048 attgaataagtgatctcacatattttttgttttttttcgtttgtttttgtgatttc 9689993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 566 - 607
Target Start/End: Complemental strand, 20607374 - 20607331
Alignment:
Q  566 tttcacatattttc--ttttctttcgtttgcttttgtgatttct 607  Q
    ||||||||||||||  |||||||||||||| |||||||||||||    
T  20607374 tttcacatattttcagttttctttcgtttgtttttgtgatttct 20607331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 606
Target Start/End: Original strand, 32015274 - 32015325
Alignment:
Q  557 aataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||  ||||| ||| |||| ||||||||||||    
T  32015274 aataagtgatttcacatattttctgttttcattcatttgtttttgtgatttc 32015325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 606
Target Start/End: Original strand, 36868058 - 36868109
Alignment:
Q  557 aataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||||| |||||||||||||||||  ||||||||||||| ||||| ||||||    
T  36868058 aataagcgatttcacatattttctactttctttcgtttgtttttgcgatttc 36868109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 424366 - 424311
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  424366 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 424311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 4882434 - 4882379
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  4882434 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 4882379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 27534745 - 27534800
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  27534745 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 27534800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 556 - 606
Target Start/End: Original strand, 12871670 - 12871722
Alignment:
Q  556 gaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  12871670 gaataagtgatttcacatattttcagttttctttcgtttgtttttgtgatttc 12871722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 29726668 - 29726616
Alignment:
Q  556 gaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  29726668 gaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 29726616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 552 - 606
Target Start/End: Original strand, 32784153 - 32784209
Alignment:
Q  552 tattgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||||||  |||||||| ||||| ||||||||||||    
T  32784153 tattgaataagtgatttcacatattttctgttttcttttgtttgtttttgtgatttc 32784209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 3232834 - 3232889
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||| |||||||||||||||||  |||||||||||||| ||||||||||||    
T  3232834 attgaataaatgatttcacatattttctgttttctttcgtttgtttttgtgatttc 3232889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 10627046 - 10627101
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||    
T  10627046 attgaataagtaatttcacatattttctgttttctttcgtttgtttttgtgatttc 10627101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 13488611 - 13488556
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||| ||||||||||  |||||||||||||| ||||||||||||    
T  13488611 attgaataagtgattttacatattttctattttctttcgtttgtttttgtgatttc 13488556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 15391327 - 15391272
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||    
T  15391327 attgaataagtgatttcacatgttttctgttttctttcgtttgtttttgtgatttc 15391272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 20411619 - 20411674
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||| ||||||    
T  20411619 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgggatttc 20411674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 28678205 - 28678150
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  | |||||||||||||| ||||||||||||    
T  28678205 attgaataagtgatttcacatattttatattttctttcgtttgtttttgtgatttc 28678150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 37822420 - 37822365
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  ||||||||| |||| ||||||||||||    
T  37822420 attgaataagtgatttcacatattttctattttctttcatttgtttttgtgatttc 37822365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 42490939 - 42490994
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||| |||  |||||||||||||| ||||||||||||    
T  42490939 attgaataagtgatttcacatatcttcagttttctttcgtttgtttttgtgatttc 42490994  T

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Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 557 - 606
Target Start/End: Original strand, 44517197 - 44517248
Alignment:
Q  557 aataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  44517197 aataagtgatttcacatattttctgctttctttcgtttgtttttgtgatttc 44517248  T

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Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 45193701 - 45193647
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  ||| |||||||||| |||||||||||    
T  45193701 attgaataagtgatttcacatattttccgtttcctttcgtttgtttttgtgattt 45193647  T

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Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 606
Target Start/End: Original strand, 18343668 - 18343715
Alignment:
Q  561 agtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  18343668 agtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 18343715  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 29205331 - 29205386
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||| ||||||||  |||||||| ||||| ||||||||||||    
T  29205331 attgaataagtgatttcatatattttctgttttcttttgtttgtttttgtgatttc 29205386  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 45750524 - 45750579
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||| ||||||||||||||   |||||||||||||| ||||||||||||    
T  45750524 attgaataagttatttcacatatttttggttttctttcgtttgtttttgtgatttc 45750579  T

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Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 3121467 - 3121413
Alignment:
Q  19 ctataaactagtaaaaataaactataagctcgtaagaaaatgacaattataaaac 73  Q
    |||||| ||| |||||||||||||||| ||| |||||||||||| ||||| ||||    
T  3121467 ctataagctaataaaaataaactataaactcataagaaaatgacgattatcaaac 3121413  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 15791344 - 15791295
Alignment:
Q  559 taagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||||||||| |||||||||||  ||||||||||||| ||||||||||||    
T  15791344 taagtgatttaacatattttctgttttctttcgtttgtttttgtgatttc 15791295  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 7583455 - 7583422
Alignment:
Q  30 taaaaataaactataagctcgtaagaaaatgaca 63  Q
    |||||||||||||||||||||| |||||||||||    
T  7583455 taaaaataaactataagctcgtgagaaaatgaca 7583422  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 606
Target Start/End: Original strand, 51418066 - 51418114
Alignment:
Q  560 aagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||  |||||||||||||| |||||| |||||    
T  51418066 aagtgatttcacatattttctgttttctttcgtttgtttttgtaatttc 51418114  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 4871101 - 4871046
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||| |||||||||||||||  |||| || |||||| ||||||||||||    
T  4871101 attgaataagttatttcacatattttctatttttttccgtttgtttttgtgatttc 4871046  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 606
Target Start/End: Original strand, 14265334 - 14265385
Alignment:
Q  557 aataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||  ||||||| ||| || ||||||||||||    
T  14265334 aataagtgatttcacatattttctgttttcttacgtatgtttttgtgatttc 14265385  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 33487105 - 33487050
Alignment:
Q  553 attgaataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||||||| ||||||||| ||||||| |  ||||||||||||| ||||||||||||    
T  33487105 attgaatatgtgatttcatatattttatgctttctttcgtttgtttttgtgatttc 33487050  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 36021093 - 36021053
Alignment:
Q  20 tataaactagtaaaaataaactataagctcgtaagaaaatg 60  Q
    ||||| ||||||||||||| |||||||||||||| ||||||    
T  36021093 tataagctagtaaaaataagctataagctcgtaacaaaatg 36021053  T

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Target: scaffold0056 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 74210 - 74264
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||||||||||    
T  74210 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattt 74264  T

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Target: scaffold1350 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Original strand, 1620 - 1675
Alignment:
Q  553 attgaataagtgatttcacatattt--tcttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||  | |||||||||||||| ||||||||||||    
T  1620 attgaataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttc 1675  T

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Target: scaffold0001 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 404333 - 404278
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||    
T  404333 attgaataagtgatttcacatattttctgttttcttccgtttgtttttgtgatttc 404278  T

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Target: scaffold0536 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 2948 - 3002
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgattt 605  Q
    |||||||||||||||||||||||||||  ||| |||||||||| |||||||||||    
T  2948 attgaataagtgatttcacatattttctgtttcctttcgtttgtttttgtgattt 3002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 556 - 607
Target Start/End: Complemental strand, 2489 - 2437
Alignment:
Q  556 gaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttct 607  Q
    ||||||||||||||||||||||||  |||||||||||||| |||||||||||||    
T  2489 gaataagtgatttcacatattttctgttttctttcgtttg-ttttgtgatttct 2437  T

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Target: scaffold0294 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 4138 - 4087
Alignment:
Q  557 aataagtgatttcacatattttct--tttctttcgtttgcttttgtgatttc 606  Q
    |||||||||||||||||||||| |  ||||||||||||| ||||||||||||    
T  4138 aataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttc 4087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 13320 - 13265
Alignment:
Q  553 attgaataagtgatttcacatattttc--ttttctttcgtttgcttttgtgatttc 606  Q
    ||||||||||||||||||||| |||||  |||||||| ||||| ||||||||||||    
T  13320 attgaataagtgatttcacatcttttctgttttcttttgtttgtttttgtgatttc 13265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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