View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1433_low_67 (Length: 244)

Name: NF1433_low_67
Description: NF1433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1433_low_67
NF1433_low_67
[»] chr5 (72 HSPs)
chr5 (14-244)||(21985765-21985994)
chr5 (14-244)||(24529494-24529724)
chr5 (14-244)||(24493842-24494071)
chr5 (15-244)||(13095768-13095996)
chr5 (14-216)||(1096769-1096970)
chr5 (14-240)||(9078230-9078455)
chr5 (15-244)||(13025584-13025812)
chr5 (15-235)||(23390115-23390335)
chr5 (14-244)||(25421806-25422035)
chr5 (14-244)||(25431668-25431897)
chr5 (14-244)||(8286471-8286689)
chr5 (14-244)||(22075293-22075511)
chr5 (29-210)||(11580878-11581058)
chr5 (14-203)||(22119811-22119998)
chr5 (26-244)||(21292611-21292817)
chr5 (15-175)||(21871190-21871349)
chr5 (15-175)||(21875470-21875629)
chr5 (14-203)||(24766955-24767142)
chr5 (29-204)||(36154461-36154635)
chr5 (14-203)||(19660455-19660643)
chr5 (27-199)||(21565863-21566034)
chr5 (14-227)||(22107002-22107204)
chr5 (29-203)||(22959166-22959339)
chr5 (27-124)||(19669293-19669390)
chr5 (14-74)||(20910430-20910490)
chr5 (15-100)||(37724318-37724403)
chr5 (28-89)||(21329127-21329188)
chr5 (37-99)||(21366308-21366370)
chr5 (38-100)||(22032730-22032792)
chr5 (38-100)||(23201783-23201845)
chr5 (37-78)||(17918804-17918845)
chr5 (28-124)||(21498649-21498745)
chr5 (29-65)||(29916580-29916616)
chr5 (38-78)||(31342539-31342579)
chr5 (38-100)||(18769647-18769709)
chr5 (37-99)||(20805962-20806024)
chr5 (38-100)||(21887238-21887300)
chr5 (29-74)||(1858621-1858666)
chr5 (59-204)||(22144364-22144508)
chr5 (13-124)||(15441583-15441694)
chr5 (13-124)||(21294892-21295003)
chr5 (43-81)||(23500993-23501031)
chr5 (42-99)||(12028223-12028280)
chr5 (54-99)||(20026521-20026566)
chr5 (162-211)||(21501919-21501968)
chr5 (42-99)||(23512522-23512579)
chr5 (42-99)||(26680981-26681038)
chr5 (28-81)||(26704499-26704552)
chr5 (42-99)||(26952588-26952645)
chr5 (28-81)||(26974232-26974285)
chr5 (38-74)||(4036636-4036672)
chr5 (38-78)||(14079584-14079624)
chr5 (38-74)||(16674568-16674604)
chr5 (38-74)||(17718093-17718129)
chr5 (38-74)||(18356743-18356779)
chr5 (38-74)||(18784463-18784499)
chr5 (164-204)||(20026706-20026746)
chr5 (38-74)||(21340421-21340457)
chr5 (38-74)||(21482894-21482930)
chr5 (38-74)||(21884843-21884879)
chr5 (42-74)||(22760081-22760113)
chr5 (38-74)||(23535243-23535279)
chr5 (42-74)||(24222304-24222336)
chr5 (38-74)||(24532702-24532738)
chr5 (38-74)||(25229060-25229096)
chr5 (38-74)||(25293216-25293252)
chr5 (38-74)||(26172880-26172916)
chr5 (38-74)||(26665785-26665821)
chr5 (14-74)||(26742376-26742436)
chr5 (38-74)||(26937382-26937418)
chr5 (38-74)||(33409622-33409658)
chr5 (38-74)||(42805836-42805872)
[»] scaffold0175 (2 HSPs)
scaffold0175 (15-244)||(13366-13594)
scaffold0175 (14-202)||(34437-34623)
[»] chr6 (61 HSPs)
chr6 (14-235)||(22779845-22780066)
chr6 (14-240)||(19303159-19303384)
chr6 (14-244)||(18409445-18409674)
chr6 (32-244)||(29060814-29061025)
chr6 (14-231)||(17287414-17287631)
chr6 (14-240)||(20594051-20594276)
chr6 (14-205)||(29808501-29808692)
chr6 (14-205)||(28496091-28496281)
chr6 (17-244)||(20637915-20638130)
chr6 (26-244)||(20360601-20360807)
chr6 (15-244)||(16920263-16920480)
chr6 (29-244)||(18821463-18821666)
chr6 (14-199)||(1561622-1561806)
chr6 (14-203)||(21939699-21939886)
chr6 (20-203)||(25611347-25611530)
chr6 (24-241)||(25628983-25629199)
chr6 (14-203)||(4185441-4185629)
chr6 (14-203)||(4667831-4668019)
chr6 (14-244)||(22831776-22831994)
chr6 (29-124)||(18457107-18457202)
chr6 (27-201)||(19652512-19652685)
chr6 (14-144)||(4674678-4674808)
chr6 (15-203)||(15894049-15894237)
chr6 (14-144)||(4189329-4189459)
chr6 (14-135)||(31155016-31155137)
chr6 (14-122)||(22334500-22334608)
chr6 (14-244)||(11185776-11185994)
chr6 (14-199)||(25603003-25603188)
chr6 (14-86)||(22439230-22439302)
chr6 (11-122)||(31164473-31164584)
chr6 (14-100)||(19863394-19863480)
chr6 (28-202)||(27332916-27333089)
chr6 (28-202)||(27393656-27393829)
chr6 (14-74)||(27415572-27415632)
chr6 (14-100)||(22432666-22432752)
chr6 (29-99)||(18180904-18180974)
chr6 (14-100)||(25641802-25641888)
chr6 (28-98)||(25956253-25956323)
chr6 (28-124)||(23019800-23019896)
chr6 (38-99)||(21834533-21834594)
chr6 (37-99)||(16523045-16523107)
chr6 (38-99)||(21739665-21739726)
chr6 (50-99)||(22080391-22080440)
chr6 (37-93)||(15041192-15041248)
chr6 (38-78)||(22429684-22429724)
chr6 (14-81)||(22059362-22059429)
chr6 (13-124)||(22331806-22331917)
chr6 (39-78)||(22405709-22405748)
chr6 (28-79)||(25644760-25644811)
chr6 (38-74)||(1587385-1587421)
chr6 (38-74)||(2684995-2685031)
chr6 (38-74)||(5616468-5616504)
chr6 (38-74)||(12496724-12496760)
chr6 (38-74)||(12707104-12707140)
chr6 (13-113)||(14099004-14099104)
chr6 (38-74)||(16741623-16741659)
chr6 (38-74)||(17804613-17804649)
chr6 (38-74)||(19663184-19663220)
chr6 (38-74)||(20803206-20803242)
chr6 (38-74)||(21702703-21702739)
chr6 (38-74)||(25766822-25766858)
[»] chr3 (92 HSPs)
chr3 (14-235)||(26687169-26687390)
chr3 (14-244)||(18438808-18439037)
chr3 (14-244)||(40213339-40213568)
chr3 (14-244)||(11424381-11424610)
chr3 (14-240)||(14973132-14973357)
chr3 (14-244)||(25476003-25476232)
chr3 (14-244)||(14576451-14576680)
chr3 (15-244)||(17488130-17488359)
chr3 (17-244)||(14572862-14573088)
chr3 (14-211)||(17247904-17248100)
chr3 (15-244)||(17499612-17499841)
chr3 (14-244)||(20698065-20698283)
chr3 (14-244)||(23082979-23083208)
chr3 (66-244)||(13442548-13442725)
chr3 (14-203)||(12340068-12340255)
chr3 (16-203)||(12851984-12852169)
chr3 (18-204)||(53070321-53070505)
chr3 (14-203)||(14669076-14669263)
chr3 (14-123)||(43842572-43842681)
chr3 (14-124)||(14179715-14179825)
chr3 (14-203)||(14665921-14666108)
chr3 (14-203)||(14735434-14735621)
chr3 (119-244)||(43841206-43841330)
chr3 (14-206)||(30030150-30030331)
chr3 (14-216)||(12399507-12399698)
chr3 (27-205)||(12933941-12934118)
chr3 (27-205)||(32307982-32308158)
chr3 (27-153)||(9513274-9513400)
chr3 (27-153)||(9521249-9521375)
chr3 (18-112)||(17247142-17247236)
chr3 (27-203)||(16097645-16097820)
chr3 (14-134)||(13209946-13210065)
chr3 (38-151)||(4588457-4588569)
chr3 (27-124)||(49389275-49389372)
chr3 (27-205)||(1644314-1644490)
chr3 (27-205)||(49667715-49667891)
chr3 (29-124)||(16104173-16104268)
chr3 (15-123)||(16809783-16809887)
chr3 (29-106)||(12171750-12171827)
chr3 (14-100)||(15877447-15877533)
chr3 (28-106)||(15471335-15471413)
chr3 (29-78)||(17674209-17674258)
chr3 (50-204)||(324549-324702)
chr3 (37-100)||(15060705-15060768)
chr3 (17-100)||(23408846-23408928)
chr3 (37-99)||(12496669-12496731)
chr3 (37-99)||(18383559-18383621)
chr3 (37-78)||(3402608-3402649)
chr3 (38-78)||(3389600-3389640)
chr3 (38-78)||(11298172-11298212)
chr3 (28-124)||(14234883-14234979)
chr3 (38-78)||(26190652-26190692)
chr3 (37-76)||(323026-323065)
chr3 (14-81)||(12037572-12037639)
chr3 (37-100)||(15051929-15051992)
chr3 (38-100)||(856549-856611)
chr3 (50-124)||(2050855-2050929)
chr3 (29-99)||(19725546-19725616)
chr3 (29-78)||(11852006-11852055)
chr3 (38-99)||(12173200-12173261)
chr3 (38-99)||(23077121-23077182)
chr3 (38-78)||(321657-321697)
chr3 (38-78)||(17524817-17524857)
chr3 (13-124)||(839612-839723)
chr3 (37-76)||(16369845-16369884)
chr3 (29-80)||(23052711-23052762)
chr3 (13-124)||(24188143-24188254)
chr3 (13-124)||(55149344-55149455)
chr3 (38-124)||(1465051-1465137)
chr3 (50-99)||(14501617-14501666)
chr3 (38-99)||(14878148-14878209)
chr3 (50-99)||(22109929-22109978)
chr3 (50-99)||(23275159-23275208)
chr3 (38-74)||(326818-326854)
chr3 (14-86)||(603258-603330)
chr3 (38-74)||(1598134-1598170)
chr3 (13-113)||(4291149-4291249)
chr3 (38-74)||(7793000-7793036)
chr3 (42-74)||(11557043-11557075)
chr3 (42-74)||(11594797-11594829)
chr3 (38-74)||(15483078-15483114)
chr3 (38-74)||(15849739-15849775)
chr3 (38-74)||(15941558-15941594)
chr3 (38-74)||(16690635-16690671)
chr3 (38-74)||(16697208-16697244)
chr3 (38-74)||(16797708-16797744)
chr3 (38-74)||(17242388-17242424)
chr3 (38-74)||(20461154-20461190)
chr3 (38-74)||(31097208-31097244)
chr3 (38-74)||(38814800-38814836)
chr3 (30-74)||(42326360-42326404)
chr3 (59-99)||(43927598-43927638)
[»] chr1 (51 HSPs)
chr1 (14-244)||(34510054-34510283)
chr1 (14-244)||(22532543-22532772)
chr1 (14-244)||(50209832-50210060)
chr1 (14-244)||(22354190-22354419)
chr1 (14-244)||(20135461-20135690)
chr1 (15-211)||(433314-433509)
chr1 (14-244)||(20846848-20847066)
chr1 (14-244)||(21026954-21027172)
chr1 (14-229)||(27250358-27250562)
chr1 (14-203)||(20918917-20919104)
chr1 (14-221)||(22355803-22355998)
chr1 (14-221)||(22357489-22357684)
chr1 (14-244)||(38801020-38801238)
chr1 (15-99)||(21301157-21301241)
chr1 (27-211)||(33681316-33681499)
chr1 (27-202)||(52927612-52927786)
chr1 (27-205)||(21754349-21754525)
chr1 (14-175)||(20091092-20091253)
chr1 (14-124)||(21162121-21162231)
chr1 (29-136)||(22238010-22238117)
chr1 (28-124)||(22921499-22921595)
chr1 (37-124)||(20248670-20248757)
chr1 (14-100)||(22468315-22468401)
chr1 (28-89)||(43697788-43697849)
chr1 (28-81)||(21714983-21715036)
chr1 (14-78)||(8761252-8761316)
chr1 (29-76)||(3472560-3472607)
chr1 (37-99)||(22432425-22432487)
chr1 (29-74)||(3704731-3704776)
chr1 (38-99)||(18181764-18181825)
chr1 (38-99)||(21787685-21787746)
chr1 (38-99)||(22831021-22831082)
chr1 (37-77)||(21023075-21023115)
chr1 (38-74)||(23818953-23818989)
chr1 (38-78)||(42864854-42864894)
chr1 (14-86)||(45307721-45307793)
chr1 (38-74)||(45489397-45489433)
chr1 (13-124)||(23763577-23763688)
chr1 (38-100)||(6152269-6152331)
chr1 (38-228)||(28194090-28194279)
chr1 (37-74)||(17678240-17678277)
chr1 (38-74)||(12647285-12647321)
chr1 (38-74)||(18882783-18882819)
chr1 (38-74)||(19212283-19212319)
chr1 (38-74)||(20138499-20138535)
chr1 (38-74)||(21305730-21305766)
chr1 (38-74)||(21615853-21615889)
chr1 (14-86)||(24087846-24087918)
chr1 (38-74)||(24782754-24782790)
chr1 (38-74)||(33797949-33797985)
chr1 (38-74)||(46975883-46975919)
[»] scaffold0011 (2 HSPs)
scaffold0011 (14-244)||(52186-52415)
scaffold0011 (14-244)||(167608-167826)
[»] chr7 (74 HSPs)
chr7 (14-244)||(3563982-3564211)
chr7 (15-244)||(38227754-38227982)
chr7 (14-244)||(9509463-9509692)
chr7 (14-244)||(12699106-12699335)
chr7 (14-244)||(15143654-15143884)
chr7 (14-244)||(16385876-16386094)
chr7 (14-244)||(27847462-27847680)
chr7 (14-244)||(40443663-40443880)
chr7 (14-203)||(28504919-28505106)
chr7 (29-204)||(17061593-17061767)
chr7 (14-203)||(9751168-9751355)
chr7 (14-203)||(2831924-2832110)
chr7 (14-203)||(18302494-18302681)
chr7 (14-199)||(39267264-39267447)
chr7 (29-204)||(44116819-44116992)
chr7 (14-199)||(15754505-15754689)
chr7 (14-203)||(34201099-34201286)
chr7 (14-214)||(26212299-26212488)
chr7 (29-124)||(12756350-12756445)
chr7 (27-144)||(44014547-44014664)
chr7 (27-205)||(810760-810937)
chr7 (14-106)||(11995676-11995768)
chr7 (27-106)||(18006052-18006131)
chr7 (27-124)||(68139-68236)
chr7 (28-128)||(47832197-47832297)
chr7 (14-81)||(19649103-19649170)
chr7 (29-99)||(2760543-2760613)
chr7 (29-99)||(3272203-3272273)
chr7 (14-100)||(24054883-24054969)
chr7 (28-81)||(18154469-18154522)
chr7 (28-124)||(16324399-16324495)
chr7 (169-244)||(10589312-10589386)
chr7 (38-100)||(10508725-10508787)
chr7 (38-100)||(12187428-12187490)
chr7 (14-124)||(21064780-21064890)
chr7 (38-99)||(17137706-17137767)
chr7 (13-124)||(44407988-44408099)
chr7 (38-100)||(11880667-11880729)
chr7 (40-78)||(15211865-15211903)
chr7 (37-78)||(14430315-14430356)
chr7 (37-74)||(42205530-42205567)
chr7 (14-86)||(4993917-4993989)
chr7 (38-74)||(8917842-8917878)
chr7 (38-78)||(9703703-9703743)
chr7 (38-74)||(13462177-13462213)
chr7 (38-74)||(15581108-15581144)
chr7 (38-74)||(15604926-15604962)
chr7 (13-124)||(14953563-14953674)
chr7 (162-233)||(16056613-16056684)
chr7 (57-124)||(22073309-22073376)
chr7 (13-124)||(26420343-26420454)
chr7 (50-124)||(2279772-2279846)
chr7 (38-124)||(9389337-9389423)
chr7 (50-99)||(2529631-2529680)
chr7 (38-99)||(12321385-12321446)
chr7 (28-65)||(14194729-14194766)
chr7 (38-74)||(11044-11080)
chr7 (38-74)||(18712-18748)
chr7 (38-74)||(6801628-6801664)
chr7 (38-74)||(9593761-9593797)
chr7 (38-74)||(9644724-9644760)
chr7 (38-74)||(11313064-11313100)
chr7 (38-74)||(11987628-11987664)
chr7 (38-74)||(12318543-12318579)
chr7 (38-74)||(13149570-13149606)
chr7 (38-74)||(13635123-13635159)
chr7 (38-74)||(15728740-15728776)
chr7 (38-74)||(16275907-16275943)
chr7 (38-74)||(16583650-16583686)
chr7 (38-74)||(16724285-16724321)
chr7 (38-74)||(17701299-17701335)
chr7 (38-74)||(26292811-26292847)
chr7 (38-74)||(35152021-35152057)
chr7 (14-86)||(35366655-35366727)
[»] chr2 (44 HSPs)
chr2 (14-244)||(23660296-23660525)
chr2 (14-244)||(27753849-27754078)
chr2 (15-235)||(22730852-22731072)
chr2 (14-244)||(298433-298661)
chr2 (15-244)||(22737799-22738027)
chr2 (15-244)||(22337389-22337617)
chr2 (17-244)||(23076716-23076940)
chr2 (29-244)||(32451562-32451776)
chr2 (14-235)||(20309387-20309597)
chr2 (15-244)||(23286135-23286352)
chr2 (14-124)||(23654028-23654138)
chr2 (14-230)||(37745-37950)
chr2 (14-121)||(28291920-28292027)
chr2 (47-203)||(23071614-23071768)
chr2 (27-202)||(22133848-22134020)
chr2 (28-105)||(25176254-25176331)
chr2 (14-81)||(23100849-23100916)
chr2 (60-143)||(28406353-28406436)
chr2 (14-100)||(22740579-22740665)
chr2 (38-100)||(24658054-24658116)
chr2 (37-99)||(25963359-25963421)
chr2 (14-99)||(22758334-22758419)
chr2 (14-99)||(22811553-22811638)
chr2 (37-99)||(21917958-21918020)
chr2 (37-99)||(37525079-37525141)
chr2 (38-99)||(22798769-22798830)
chr2 (42-78)||(24654996-24655032)
chr2 (38-74)||(27263667-27263703)
chr2 (30-74)||(40428892-40428936)
chr2 (38-78)||(45677798-45677838)
chr2 (13-124)||(24503476-24503587)
chr2 (14-81)||(44369918-44369985)
chr2 (31-81)||(23038468-23038518)
chr2 (29-211)||(23708252-23708432)
chr2 (38-75)||(40621851-40621888)
chr2 (38-74)||(19928156-19928192)
chr2 (38-74)||(22460844-22460880)
chr2 (38-74)||(23187491-23187527)
chr2 (38-74)||(23598754-23598790)
chr2 (42-74)||(24175227-24175259)
chr2 (38-78)||(24674012-24674052)
chr2 (42-74)||(24870307-24870339)
chr2 (38-74)||(26125619-26125655)
chr2 (38-74)||(41667365-41667401)
[»] chr8 (75 HSPs)
chr8 (14-235)||(23406663-23406884)
chr8 (14-244)||(18818028-18818256)
chr8 (14-244)||(22627009-22627238)
chr8 (14-235)||(18878855-18879076)
chr8 (15-238)||(6759536-6759759)
chr8 (14-244)||(20536482-20536711)
chr8 (15-244)||(28648663-28648891)
chr8 (14-240)||(16091959-16092184)
chr8 (14-244)||(21923546-21923775)
chr8 (15-244)||(23648827-23649055)
chr8 (14-204)||(41598498-41598687)
chr8 (29-176)||(7373090-7373237)
chr8 (14-240)||(22875343-22875568)
chr8 (14-203)||(5865895-5866082)
chr8 (14-244)||(21918628-21918847)
chr8 (14-203)||(17141229-17141416)
chr8 (14-244)||(16199276-16199493)
chr8 (14-244)||(31971529-31971747)
chr8 (14-124)||(21491385-21491495)
chr8 (14-124)||(45130649-45130759)
chr8 (14-203)||(21249697-21249884)
chr8 (14-203)||(21255535-21255722)
chr8 (14-106)||(19801045-19801137)
chr8 (38-227)||(25362793-25362971)
chr8 (27-144)||(21674078-21674195)
chr8 (27-144)||(26355329-26355446)
chr8 (14-99)||(21389071-21389156)
chr8 (28-106)||(38854883-38854961)
chr8 (28-106)||(6520779-6520857)
chr8 (29-99)||(16409889-16409959)
chr8 (29-99)||(16860971-16861041)
chr8 (29-78)||(20856059-20856108)
chr8 (37-104)||(23760481-23760548)
chr8 (37-99)||(15602659-15602721)
chr8 (37-99)||(15611111-15611173)
chr8 (38-99)||(22010322-22010383)
chr8 (38-78)||(377714-377754)
chr8 (38-78)||(20465682-20465722)
chr8 (43-99)||(21395630-21395686)
chr8 (43-99)||(21790123-21790179)
chr8 (37-124)||(16411911-16411998)
chr8 (38-100)||(17353580-17353642)
chr8 (38-100)||(19899509-19899571)
chr8 (26-124)||(21414857-21414955)
chr8 (38-99)||(20499078-20499139)
chr8 (38-99)||(30642934-30642995)
chr8 (43-99)||(17926355-17926411)
chr8 (38-74)||(18619894-18619930)
chr8 (38-74)||(22028973-22029009)
chr8 (30-74)||(39094587-39094631)
chr8 (37-100)||(19259244-19259306)
chr8 (13-124)||(20527815-20527926)
chr8 (38-100)||(16185142-16185204)
chr8 (38-100)||(19976859-19976921)
chr8 (38-100)||(19983507-19983569)
chr8 (38-124)||(39834225-39834311)
chr8 (50-99)||(13507663-13507712)
chr8 (50-99)||(13597195-13597244)
chr8 (38-99)||(21161758-21161819)
chr8 (38-99)||(21168364-21168425)
chr8 (14-86)||(10829072-10829144)
chr8 (38-74)||(15532304-15532340)
chr8 (38-74)||(15538864-15538900)
chr8 (163-203)||(17266757-17266797)
chr8 (38-70)||(22057768-22057800)
chr8 (38-74)||(22113382-22113418)
chr8 (38-74)||(22134885-22134921)
chr8 (38-74)||(22166035-22166071)
chr8 (38-74)||(23252416-23252452)
chr8 (38-74)||(23834589-23834625)
chr8 (38-74)||(24433891-24433927)
chr8 (14-78)||(24756157-24756221)
chr8 (38-74)||(30308408-30308444)
chr8 (38-74)||(32599094-32599130)
chr8 (38-74)||(32605626-32605662)
[»] scaffold0122 (2 HSPs)
scaffold0122 (15-244)||(25684-25912)
scaffold0122 (14-240)||(33112-33338)
[»] scaffold0121 (1 HSPs)
scaffold0121 (17-244)||(8154-8379)
[»] chr4 (73 HSPs)
chr4 (14-244)||(7798971-7799200)
chr4 (15-240)||(14038926-14039151)
chr4 (14-240)||(15091174-15091400)
chr4 (14-244)||(22636708-22636937)
chr4 (14-244)||(44053103-44053332)
chr4 (14-244)||(16377140-16377369)
chr4 (15-211)||(44928542-44928737)
chr4 (17-244)||(7089151-7089366)
chr4 (14-244)||(12903031-12903248)
chr4 (14-244)||(3096917-3097135)
chr4 (14-203)||(24029057-24029244)
chr4 (14-174)||(16239610-16239769)
chr4 (29-204)||(44102524-44102697)
chr4 (29-167)||(6190783-6190921)
chr4 (14-203)||(13812427-13812614)
chr4 (14-133)||(20156908-20157027)
chr4 (14-203)||(15552129-15552316)
chr4 (14-203)||(22633831-22634018)
chr4 (14-244)||(14052932-14053149)
chr4 (14-134)||(16597028-16597148)
chr4 (38-227)||(17047726-17047903)
chr4 (27-144)||(8846748-8846865)
chr4 (27-205)||(12774312-12774488)
chr4 (29-117)||(21814936-21815024)
chr4 (29-117)||(21818358-21818446)
chr4 (141-244)||(7893974-7894077)
chr4 (29-204)||(21815265-21815438)
chr4 (28-106)||(39705920-39705998)
chr4 (28-91)||(13844965-13845028)
chr4 (191-244)||(16239764-16239817)
chr4 (162-235)||(23374125-23374198)
chr4 (68-115)||(17046718-17046765)
chr4 (15-66)||(17053482-17053533)
chr4 (14-51)||(3332284-3332321)
chr4 (37-78)||(16348334-16348375)
chr4 (38-99)||(16356596-16356657)
chr4 (28-124)||(43198220-43198316)
chr4 (13-124)||(14679328-14679439)
chr4 (29-131)||(15464562-15464664)
chr4 (38-100)||(44676046-44676108)
chr4 (15-124)||(14685537-14685646)
chr4 (38-99)||(15094188-15094249)
chr4 (38-99)||(15121446-15121507)
chr4 (38-74)||(3413212-3413248)
chr4 (38-78)||(13569948-13569988)
chr4 (39-91)||(15190743-15190795)
chr4 (38-74)||(18602399-18602435)
chr4 (38-74)||(18608993-18609029)
chr4 (38-78)||(23843915-23843955)
chr4 (13-124)||(7900800-7900911)
chr4 (50-105)||(15868289-15868344)
chr4 (13-124)||(23838799-23838910)
chr4 (38-124)||(15099743-15099829)
chr4 (13-74)||(27534441-27534502)
chr4 (50-99)||(32851869-32851918)
chr4 (59-124)||(52242856-52242921)
chr4 (38-74)||(1951415-1951451)
chr4 (38-74)||(2015194-2015230)
chr4 (42-74)||(11250219-11250251)
chr4 (38-78)||(12570457-12570497)
chr4 (38-74)||(14708288-14708324)
chr4 (38-74)||(16243054-16243090)
chr4 (42-74)||(16351506-16351538)
chr4 (13-113)||(16956279-16956379)
chr4 (38-74)||(18222032-18222068)
chr4 (38-74)||(18237308-18237344)
chr4 (38-74)||(23139686-23139722)
chr4 (38-74)||(26243319-26243355)
chr4 (59-99)||(26789832-26789872)
chr4 (38-74)||(28569098-28569134)
chr4 (38-74)||(36133616-36133652)
chr4 (38-74)||(43255814-43255850)
chr4 (38-74)||(45938563-45938599)
[»] scaffold0042 (5 HSPs)
scaffold0042 (15-244)||(23921-24148)
scaffold0042 (38-78)||(34553-34593)
scaffold0042 (38-78)||(41196-41236)
scaffold0042 (38-74)||(64269-64305)
scaffold0042 (38-74)||(76153-76189)
[»] scaffold0627 (1 HSPs)
scaffold0627 (14-240)||(182-407)
[»] scaffold0305 (1 HSPs)
scaffold0305 (14-244)||(20677-20906)
[»] scaffold0021 (3 HSPs)
scaffold0021 (14-244)||(124859-125085)
scaffold0021 (27-144)||(62934-63051)
scaffold0021 (14-79)||(175202-175267)
[»] scaffold0639 (1 HSPs)
scaffold0639 (14-244)||(8749-8978)
[»] scaffold0292 (2 HSPs)
scaffold0292 (14-244)||(3744-3973)
scaffold0292 (26-244)||(616-833)
[»] scaffold0145 (1 HSPs)
scaffold0145 (14-244)||(39034-39262)
[»] scaffold0080 (2 HSPs)
scaffold0080 (14-244)||(40186-40414)
scaffold0080 (38-100)||(18299-18361)
[»] scaffold0056 (3 HSPs)
scaffold0056 (14-244)||(16833-17062)
scaffold0056 (14-124)||(78980-79090)
scaffold0056 (14-78)||(13696-13760)
[»] scaffold0231 (1 HSPs)
scaffold0231 (29-244)||(23156-23370)
[»] scaffold0026 (5 HSPs)
scaffold0026 (14-244)||(40130-40359)
scaffold0026 (14-144)||(39549-39679)
scaffold0026 (80-176)||(26567-26662)
scaffold0026 (72-203)||(59179-59308)
scaffold0026 (200-244)||(26169-26213)
[»] scaffold0003 (3 HSPs)
scaffold0003 (14-244)||(339569-339797)
scaffold0003 (14-74)||(71729-71789)
scaffold0003 (38-74)||(140126-140162)
[»] scaffold0016 (2 HSPs)
scaffold0016 (15-235)||(2133-2353)
scaffold0016 (38-203)||(207161-207324)
[»] scaffold0540 (1 HSPs)
scaffold0540 (14-222)||(631-838)
[»] scaffold0217 (1 HSPs)
scaffold0217 (24-240)||(16227-16443)
[»] scaffold0034 (2 HSPs)
scaffold0034 (29-244)||(51517-51731)
scaffold0034 (50-124)||(32929-33003)
[»] scaffold0413 (1 HSPs)
scaffold0413 (14-204)||(15233-15422)
[»] scaffold0100 (1 HSPs)
scaffold0100 (14-204)||(20426-20615)
[»] scaffold0120 (4 HSPs)
scaffold0120 (15-244)||(16361-16588)
scaffold0120 (14-240)||(32577-32802)
scaffold0120 (14-240)||(46203-46428)
scaffold0120 (38-74)||(19671-19707)
[»] scaffold0647 (1 HSPs)
scaffold0647 (14-244)||(5739-5968)
[»] scaffold0228 (4 HSPs)
scaffold0228 (15-216)||(4809-5010)
scaffold0228 (15-216)||(12391-12592)
scaffold0228 (15-216)||(22343-22544)
scaffold0228 (38-78)||(18286-18326)
[»] scaffold0352 (1 HSPs)
scaffold0352 (14-176)||(17626-17788)
[»] scaffold1842 (1 HSPs)
scaffold1842 (14-244)||(678-896)
[»] scaffold0598 (1 HSPs)
scaffold0598 (14-235)||(681-891)
[»] scaffold0839 (1 HSPs)
scaffold0839 (14-211)||(1696-1891)
[»] scaffold0193 (2 HSPs)
scaffold0193 (14-244)||(13485-13703)
scaffold0193 (38-74)||(9836-9872)
[»] scaffold0358 (2 HSPs)
scaffold0358 (14-244)||(209-428)
scaffold0358 (14-244)||(4985-5204)
[»] scaffold0266 (1 HSPs)
scaffold0266 (14-150)||(18576-18712)
[»] scaffold0456 (1 HSPs)
scaffold0456 (14-235)||(10055-10265)
[»] scaffold0395 (2 HSPs)
scaffold0395 (14-244)||(580-810)
scaffold0395 (14-124)||(8110-8220)
[»] scaffold0876 (1 HSPs)
scaffold0876 (14-137)||(2703-2826)
[»] scaffold0142 (2 HSPs)
scaffold0142 (29-204)||(17094-17268)
scaffold0142 (96-203)||(7471-7576)
[»] scaffold0084 (1 HSPs)
scaffold0084 (14-240)||(10441-10661)
[»] scaffold0161 (1 HSPs)
scaffold0161 (15-203)||(2064-2250)
[»] scaffold0427 (1 HSPs)
scaffold0427 (14-235)||(13777-13987)
[»] scaffold0221 (1 HSPs)
scaffold0221 (14-200)||(12427-12611)
[»] scaffold0718 (1 HSPs)
scaffold0718 (14-221)||(4760-4956)
[»] scaffold0389 (1 HSPs)
scaffold0389 (14-123)||(13226-13335)
[»] scaffold0166 (1 HSPs)
scaffold0166 (14-203)||(9452-9639)
[»] scaffold0114 (3 HSPs)
scaffold0114 (14-244)||(15094-15312)
scaffold0114 (14-88)||(32894-32968)
scaffold0114 (38-100)||(7704-7766)
[»] scaffold0075 (1 HSPs)
scaffold0075 (15-203)||(7913-8099)
[»] scaffold0130 (2 HSPs)
scaffold0130 (14-124)||(28929-29039)
scaffold0130 (138-238)||(28110-28210)
[»] scaffold0070 (2 HSPs)
scaffold0070 (14-244)||(4797-5026)
scaffold0070 (38-74)||(10319-10355)
[»] scaffold0403 (1 HSPs)
scaffold0403 (15-230)||(5135-5339)
[»] scaffold0347 (1 HSPs)
scaffold0347 (14-203)||(344-530)
[»] scaffold0261 (2 HSPs)
scaffold0261 (14-203)||(15974-16161)
scaffold0261 (9-100)||(1754-1845)
[»] scaffold0113 (1 HSPs)
scaffold0113 (17-216)||(32365-32553)
[»] scaffold0037 (2 HSPs)
scaffold0037 (14-203)||(79950-80137)
scaffold0037 (38-124)||(21212-21298)
[»] scaffold0351 (1 HSPs)
scaffold0351 (14-228)||(16568-16771)
[»] scaffold0151 (1 HSPs)
scaffold0151 (14-121)||(10540-10647)
[»] scaffold0490 (1 HSPs)
scaffold0490 (14-244)||(2226-2444)
[»] scaffold0192 (1 HSPs)
scaffold0192 (15-203)||(10226-10412)
[»] scaffold0028 (1 HSPs)
scaffold0028 (27-205)||(132966-133143)
[»] scaffold0124 (1 HSPs)
scaffold0124 (14-203)||(24268-24456)
[»] scaffold0031 (3 HSPs)
scaffold0031 (14-124)||(20044-20154)
scaffold0031 (14-81)||(65412-65479)
scaffold0031 (38-74)||(53981-54017)
[»] scaffold0218 (2 HSPs)
scaffold0218 (15-124)||(28899-29008)
scaffold0218 (163-231)||(7841-7909)
[»] scaffold0235 (2 HSPs)
scaffold0235 (42-244)||(11170-11360)
scaffold0235 (50-99)||(14057-14106)
[»] scaffold0088 (2 HSPs)
scaffold0088 (15-122)||(21285-21392)
scaffold0088 (163-228)||(21200-21265)
[»] scaffold0064 (2 HSPs)
scaffold0064 (14-230)||(47273-47478)
scaffold0064 (38-100)||(64306-64368)
[»] scaffold0556 (1 HSPs)
scaffold0556 (27-144)||(7184-7301)
[»] scaffold0475 (1 HSPs)
scaffold0475 (14-203)||(9391-9579)
[»] scaffold0309 (1 HSPs)
scaffold0309 (14-244)||(6884-7102)
[»] scaffold0211 (1 HSPs)
scaffold0211 (27-205)||(28440-28617)
[»] scaffold0150 (1 HSPs)
scaffold0150 (27-205)||(32396-32573)
[»] scaffold0484 (1 HSPs)
scaffold0484 (38-227)||(1204-1382)
[»] scaffold0247 (2 HSPs)
scaffold0247 (17-124)||(6449-6556)
scaffold0247 (163-227)||(6561-6625)
[»] scaffold0032 (1 HSPs)
scaffold0032 (18-235)||(51861-52067)
[»] scaffold0165 (3 HSPs)
scaffold0165 (38-227)||(3771-3949)
scaffold0165 (38-227)||(7835-8013)
scaffold0165 (50-99)||(27296-27345)
[»] scaffold1137 (1 HSPs)
scaffold1137 (29-205)||(1934-2109)
[»] scaffold1984 (1 HSPs)
scaffold1984 (27-211)||(437-620)
[»] scaffold0503 (1 HSPs)
scaffold0503 (29-124)||(12321-12416)
[»] scaffold0423 (1 HSPs)
scaffold0423 (14-93)||(10890-10969)
[»] scaffold0001 (1 HSPs)
scaffold0001 (29-124)||(161078-161173)
[»] scaffold0141 (1 HSPs)
scaffold0141 (130-240)||(39754-39863)
[»] scaffold0049 (1 HSPs)
scaffold0049 (130-240)||(74949-75058)
[»] scaffold0023 (2 HSPs)
scaffold0023 (27-205)||(101708-101884)
scaffold0023 (27-89)||(39640-39702)
[»] scaffold0628 (1 HSPs)
scaffold0628 (27-205)||(2434-2610)
[»] scaffold0102 (2 HSPs)
scaffold0102 (27-144)||(19639-19756)
scaffold0102 (27-100)||(48092-48165)
[»] scaffold0810 (1 HSPs)
scaffold0810 (29-124)||(3325-3420)
[»] scaffold0125 (1 HSPs)
scaffold0125 (27-203)||(45420-45596)
[»] scaffold2044 (1 HSPs)
scaffold2044 (15-74)||(1075-1134)
[»] scaffold0207 (1 HSPs)
scaffold0207 (29-124)||(2277-2372)
[»] scaffold0278 (1 HSPs)
scaffold0278 (27-124)||(5986-6083)
[»] scaffold0555 (2 HSPs)
scaffold0555 (14-120)||(976-1082)
scaffold0555 (28-99)||(10200-10271)
[»] scaffold0106 (3 HSPs)
scaffold0106 (14-228)||(1575-1778)
scaffold0106 (14-228)||(7552-7755)
scaffold0106 (14-81)||(16083-16150)
[»] scaffold0138 (3 HSPs)
scaffold0138 (28-106)||(13351-13429)
scaffold0138 (13-124)||(29836-29947)
scaffold0138 (13-124)||(41832-41943)
[»] scaffold0046 (1 HSPs)
scaffold0046 (14-80)||(14914-14980)
[»] scaffold0010 (3 HSPs)
scaffold0010 (27-89)||(130335-130397)
scaffold0010 (38-74)||(23632-23668)
scaffold0010 (13-113)||(242434-242534)
[»] scaffold0621 (1 HSPs)
scaffold0621 (27-124)||(6930-7026)
[»] scaffold0346 (1 HSPs)
scaffold0346 (15-74)||(17343-17402)
[»] scaffold0107 (1 HSPs)
scaffold0107 (15-74)||(15049-15108)
[»] scaffold0139 (1 HSPs)
scaffold0139 (14-100)||(20397-20483)
[»] scaffold0004 (2 HSPs)
scaffold0004 (14-100)||(70210-70296)
scaffold0004 (38-74)||(10238-10274)
[»] scaffold0367 (1 HSPs)
scaffold0367 (37-99)||(1308-1370)
[»] scaffold0008 (1 HSPs)
scaffold0008 (29-99)||(30379-30449)
[»] scaffold0327 (1 HSPs)
scaffold0327 (38-99)||(681-742)
[»] scaffold0198 (1 HSPs)
scaffold0198 (28-81)||(26834-26887)
[»] scaffold0167 (1 HSPs)
scaffold0167 (28-81)||(36024-36077)
[»] scaffold0131 (1 HSPs)
scaffold0131 (28-81)||(36891-36944)
[»] scaffold0530 (1 HSPs)
scaffold0530 (39-123)||(671-755)
[»] scaffold0280 (1 HSPs)
scaffold0280 (34-78)||(18941-18985)
[»] scaffold0020 (2 HSPs)
scaffold0020 (28-124)||(15462-15558)
scaffold0020 (28-81)||(179085-179138)
[»] scaffold1895 (1 HSPs)
scaffold1895 (38-100)||(891-953)
[»] scaffold0393 (1 HSPs)
scaffold0393 (37-99)||(1905-1967)
[»] scaffold0333 (2 HSPs)
scaffold0333 (28-106)||(7024-7102)
scaffold0333 (28-106)||(14404-14482)
[»] scaffold0158 (2 HSPs)
scaffold0158 (38-100)||(3253-3315)
scaffold0158 (38-100)||(6919-6981)
[»] scaffold0029 (1 HSPs)
scaffold0029 (38-100)||(13172-13234)
[»] scaffold1992 (1 HSPs)
scaffold1992 (29-70)||(239-280)
[»] scaffold0476 (2 HSPs)
scaffold0476 (38-99)||(5997-6058)
scaffold0476 (38-99)||(7192-7253)
[»] scaffold0079 (1 HSPs)
scaffold0079 (37-78)||(44486-44527)
[»] scaffold0035 (1 HSPs)
scaffold0035 (38-99)||(46370-46431)
[»] scaffold0412 (1 HSPs)
scaffold0412 (38-78)||(6059-6099)
[»] scaffold0116 (2 HSPs)
scaffold0116 (48-124)||(43436-43512)
scaffold0116 (48-124)||(47356-47432)
[»] scaffold0210 (2 HSPs)
scaffold0210 (38-81)||(21449-21492)
scaffold0210 (38-81)||(29341-29384)
[»] scaffold0104 (2 HSPs)
scaffold0104 (40-99)||(2241-2300)
scaffold0104 (40-99)||(9923-9982)
[»] scaffold0017 (4 HSPs)
scaffold0017 (19-78)||(190905-190964)
scaffold0017 (19-78)||(192608-192667)
scaffold0017 (42-74)||(14971-15003)
scaffold0017 (42-74)||(19493-19525)
[»] scaffold1124 (1 HSPs)
scaffold1124 (38-100)||(2290-2352)
[»] scaffold0676 (1 HSPs)
scaffold0676 (37-99)||(4842-4904)
[»] scaffold0615 (1 HSPs)
scaffold0615 (37-99)||(1726-1788)
[»] scaffold0297 (2 HSPs)
scaffold0297 (38-100)||(10464-10526)
scaffold0297 (38-100)||(15322-15384)
[»] scaffold0171 (1 HSPs)
scaffold0171 (37-99)||(35163-35225)
[»] scaffold0043 (1 HSPs)
scaffold0043 (38-100)||(18654-18716)
[»] scaffold1296 (1 HSPs)
scaffold1296 (37-74)||(830-867)
[»] scaffold1220 (1 HSPs)
scaffold1220 (29-74)||(2217-2262)
[»] scaffold0483 (1 HSPs)
scaffold0483 (29-74)||(747-792)
[»] scaffold0243 (1 HSPs)
scaffold0243 (39-124)||(5765-5850)
[»] scaffold0109 (3 HSPs)
scaffold0109 (29-74)||(45534-45579)
scaffold0109 (38-74)||(10956-10992)
scaffold0109 (38-74)||(38473-38509)
[»] scaffold1552 (1 HSPs)
scaffold1552 (38-74)||(769-805)
[»] scaffold0761 (1 HSPs)
scaffold0761 (29-81)||(5943-5995)
[»] scaffold0324 (1 HSPs)
scaffold0324 (38-78)||(15837-15877)
[»] scaffold0311 (1 HSPs)
scaffold0311 (38-78)||(6721-6761)
[»] scaffold0216 (2 HSPs)
scaffold0216 (14-78)||(16740-16804)
scaffold0216 (13-124)||(8506-8617)
[»] scaffold0078 (1 HSPs)
scaffold0078 (58-106)||(10939-10987)
[»] scaffold0525 (1 HSPs)
scaffold0525 (13-124)||(3505-3616)
[»] scaffold0233 (1 HSPs)
scaffold0233 (13-124)||(14169-14280)
[»] scaffold0215 (1 HSPs)
scaffold0215 (38-81)||(27256-27299)
[»] scaffold0586 (1 HSPs)
scaffold0586 (26-124)||(2246-2344)
[»] scaffold0425 (1 HSPs)
scaffold0425 (38-76)||(595-633)
[»] scaffold0132 (1 HSPs)
scaffold0132 (36-74)||(36721-36759)
[»] scaffold0101 (1 HSPs)
scaffold0101 (14-100)||(8576-8662)
[»] scaffold0096 (1 HSPs)
scaffold0096 (38-100)||(15992-16054)
[»] scaffold0439 (2 HSPs)
scaffold0439 (37-74)||(2088-2125)
scaffold0439 (37-74)||(9948-9985)
[»] scaffold0342 (1 HSPs)
scaffold0342 (37-74)||(6923-6960)
[»] scaffold0174 (1 HSPs)
scaffold0174 (37-78)||(18095-18136)
[»] scaffold0111 (1 HSPs)
scaffold0111 (47-100)||(32848-32901)
[»] scaffold1461 (1 HSPs)
scaffold1461 (38-74)||(345-381)
[»] scaffold1326 (1 HSPs)
scaffold1326 (38-78)||(1143-1183)
[»] scaffold0671 (1 HSPs)
scaffold0671 (38-74)||(6543-6579)
[»] scaffold0546 (1 HSPs)
scaffold0546 (38-74)||(2315-2351)
[»] scaffold0405 (1 HSPs)
scaffold0405 (38-74)||(9346-9382)
[»] scaffold0371 (1 HSPs)
scaffold0371 (38-74)||(15759-15795)
[»] scaffold0334 (1 HSPs)
scaffold0334 (38-74)||(18014-18050)
[»] scaffold0285 (1 HSPs)
scaffold0285 (38-74)||(12169-12205)
[»] scaffold0284 (1 HSPs)
scaffold0284 (38-74)||(18770-18806)
[»] scaffold0081 (1 HSPs)
scaffold0081 (38-78)||(15107-15147)
[»] scaffold0051 (1 HSPs)
scaffold0051 (13-113)||(37084-37184)
[»] scaffold0036 (2 HSPs)
scaffold0036 (38-74)||(66069-66105)
scaffold0036 (38-74)||(71210-71246)
[»] scaffold0022 (1 HSPs)
scaffold0022 (59-99)||(80756-80796)


Alignment Details
Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 21985765 - 21985994
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  21985765 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 21985864  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||    
T  21985865 atgagattgaacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacggcaagcagaggccctcgcctcgcgagtgacccagaa 21985963  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||||||||||||||||||||||||||    
T  21985964 acagagtgtcttgttaggtttttgcgacctt 21985994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 24529724 - 24529494
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||    
T  24529724 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtagg 24529625  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| |||| |||||||||| ||||||||||||||||| ||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  24529624 atgagattgaacctggaaaggttgtagaatgaaacttttggaattctgatctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 24529525  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| || ||||||||||||||||||||||||    
T  24529524 acagagagtcttgttaggtttttgcgacctt 24529494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 24494071 - 24493842
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||| ||||| |||||||||||||    
T  24494071 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtagg 24493972  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||||||| | ||||||||||||||||||||| || |||| ||||| |||||||| |||||||||| ||    
T  24493971 atgagattgaacctggaaagatt-tagaatgaaactttttggattctgacctgaactcgccacggcgagcagaggctttcgcctcgtgagtaacccataa 24493873  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||||||||||||||||||||||||||    
T  24493872 acagagtgtcttgttaggtttttgcgacctt 24493842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 13095996 - 13095768
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||    
T  13095996 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtagga 13095897  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||| | ||| ||||||| ||||||| ||||| ||| |||||||||||||||||||||||| |||| |||| |||||||||||||| ||| |||||    
T  13095896 tgagattggacctggaaagatt-tagaatgaaacttgtgggattctgacctgaactcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaa 13095798  T
Q  215 caaagtgtcttgttaggtttttgcgacctt 244  Q
    || |||| ||||||||||||||||||||||    
T  13095797 cagagtgacttgttaggtttttgcgacctt 13095768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 14 - 216
Target Start/End: Complemental strand, 1096970 - 1096769
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  1096970 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 1096871  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||| || || | ||||||||||||||||||| ||||||||    
T  1096870 atgagattgaatctggaaagattgcagaatg-aacttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 1096772  T
Q  214 aca 216  Q
    |||    
T  1096771 aca 1096769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 9078455 - 9078230
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| |||| |||||||     
T  9078455 cagagagcatgcaagatttcgtgattttgacttttgagttgatctttatatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaga 9078356  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||| ||| ||||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  9078355 atgagattgaacctggaaagatt-tagaatgaaaccttttgaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 9078257  T
Q  214 acaaagtgtcttgttaggtttttgcga 240  Q
    ||| |||| ||||||||| ||||||||    
T  9078256 acagagtgccttgttaggattttgcga 9078230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 13025812 - 13025584
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||| ||||| ||||||||||||||    
T  13025812 agagagcatgcaagatttcgtgattttgaattttgagttgatccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtagga 13025713  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||| | ||| ||||||| ||||||| ||||| ||| |||||||||||||||||||||||| |||| |||| |||||||||||||| ||| |||||    
T  13025712 tgagattggacctggaaagatt-tagaatgaaacttgtgggattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacctagaaa 13025614  T
Q  215 caaagtgtcttgttaggtttttgcgacctt 244  Q
    || |||| ||||||||||||||||||||||    
T  13025613 cagagtgacttgttaggtttttgcgacctt 13025584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 235
Target Start/End: Original strand, 23390115 - 23390335
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  23390115 agagagcatccaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 23390214  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||  || || | ||||| ||||||| ||||| ||||  |||    
T  23390215 tgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaa 23390314  T
Q  215 caaagtgtcttgttaggtttt 235  Q
    || |||| |||||||| ||||    
T  23390315 cagagtgccttgttagatttt 23390335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 25422035 - 25421806
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||  ||||    
T  25422035 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttagg 25421936  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||| | ||| ||||||| ||||||| |||||| |||| |||||| |||||||||||| || || | ||||||||||||||||||| ||| ||||    
T  25421935 atgagattggacctggaaagatt-tagaatgaaactttcggaaatctgacttgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaa 25421837  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||  |||| ||||||||| ||||||||||||    
T  25421836 accgagtgccttgttaggattttgcgacctt 25421806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 25431897 - 25431668
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| |||||||| ||||    
T  25431897 cagagagcgtgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttagg 25431798  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||| | ||| ||||||| ||||||| ||||||||||| |||||| |||||||||||| || || | |||||||| |||||||||| ||||||||    
T  25431797 atgagattggacctggaaagatt-tagaatgaaacttttggaaatctgacttgaactcgccacggcgagtagaggctctcacctcgcgagtgacccagaa 25431699  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    |   |||| ||||||||| ||||||||||||    
T  25431698 atcgagtgccttgttaggattttgcgacctt 25431668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 8286471 - 8286689
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  8286471 cagagagcatgcaagatttcgtgtttttgacttttgagttgaaccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtagg 8286570  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||| ||||| ||| |||||||||| |||| ||||  || |||| ||||||||||||||||||| ||||||||    
T  8286571 atgagattgaacctg-----------gaatgaaacttgtgggattctgacctaaactagccatggcgagcagaggctctcgcctcgcgagtgacccagaa 8286659  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  8286660 acagagtgacttgtta-gattttgcgacctt 8286689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 22075511 - 22075293
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||    
T  22075511 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtagg 22075412  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccag-a 212  Q
    |||| | |||| |||           ||||| ||||| ||   |||||||||||||||||||| || |||| ||||||||||||||||||| |||||| |    
T  22075411 atgaaaatgaacctg-----------gaatgaaacttgtgaggttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 22075323  T
Q  213 aacaaagtgtcttgttaggtttttgcgacctt 244  Q
    |||| |||| ||||||||  ||||||||||||    
T  22075322 aacagagtgacttgttag--ttttgcgacctt 22075293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 29 - 210
Target Start/End: Original strand, 11580878 - 11581058
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||| |||||||||||| ||||||||||| |||    
T  11580878 atttcgtgattttgacttttgagttgatccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 11580977  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaaccca 210  Q
     | ||||| ||||||  ||||||  ||| ||||||||||||||||||  || |||| ||||||||||||||||||| |||||    
T  11580978 gatagattttagaataaaactttgagaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgaccca 11581058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 22119811 - 22119998
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||| |||||||||||||    
T  22119811 cagagagcatgcaaaattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22119910  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||||| | ||||||| |||||| |  | ||||| ||||||||||||  || |||| ||||||||||||||||||    
T  22119911 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 22119998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 21292611 - 21292817
Alignment:
Q  26 aagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaat 125  Q
    ||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||     
T  21292611 aagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaac 21292710  T
Q  126 ctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtctt 225  Q
    |||           ||||  ||||| ||||||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||| | |||| |||    
T  21292711 ctg-----------gaattaaacttgtggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgactt 21292799  T
Q  226 gttaggtttttgcgacctt 244  Q
     ||| | ||||||||||||    
T  21292800 ttta-gattttgcgacctt 21292817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 21871190 - 21871349
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| ||||| |||||| |||||||    
T  21871190 agagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtagga 21871289  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgcca 175  Q
    |||||||||| ||| ||||||| | |||||  |||||||  ||||||||||| ||||||||    
T  21871290 tgagattgaacctggaaagattatggaatg-gacttttgtgattctgacctgtactcgcca 21871349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 21875470 - 21875629
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| ||||| |||||| |||||||    
T  21875470 agagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtagga 21875569  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgcca 175  Q
    |||||||||| ||| ||||||| | |||||  |||||||  ||||||||||| ||||||||    
T  21875570 tgagattgaacctggaaagattatggaatg-gacttttgtgattctgacctgtactcgcca 21875629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 24766955 - 24767142
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||| ||||||||||||||| |||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||| |||||||||||||    
T  24766955 cagatagcatgcaagatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtagg 24767054  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||||||| ||||| | ||||||| |||||| |  | ||||| ||||||||| ||  || |||| ||||||||||||||||||    
T  24767055 atgagattgaatctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 24767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 204
Target Start/End: Original strand, 36154461 - 36154635
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||  |||||||||| |||    
T  36154461 atttcatgattttgacttttaagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctg 36154560  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
     | ||||| ||||||  ||||||  ||| ||||||||||||||||||  || || | |||||||||||||||||||    
T  36154561 gatagattttagaataaaactttgagaa-tctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 36154635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 19660455 - 19660643
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |     
T  19660455 cagagagcatgcaagattttgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtgga 19660554  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttgga-attctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    |||||||| || ||| ||||| | ||||||| ||  |||||| | ||| ||| ||||||||||  || |||| ||||||||||||||||||    
T  19660555 atgagattaaacctggaaagact-tagaatgaaaactttggagaatctaacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 19660643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 21566034 - 21565863
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  21566034 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 21565935  T
Q  127 tgaaaagattgtagaatgtaacttttg-gaattctgacctgaactcgccacagcaagcataggctctcgcctcg 199  Q
    || ||||||| ||||||| || ||| | ||||| | ||||||||||||||  || |||| ||||||||||||||    
T  21565934 tggaaagattttagaatg-aattttcgtgaattgt-acctgaactcgccatggcgagcagaggctctcgcctcg 21565863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 227
Target Start/End: Original strand, 22107002 - 22107204
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||| |||||||  |||||||||||||||||| | |||||||| |||||||||||||||||||||||||  ||||| |||||||||||||    
T  22107002 cagagagcatgcaaaatttcgtatttttgacttttgagttgaactttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22107101  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    | ||||||||| ||||           |||  ||||| ||| |||||||||||||||| |||  || |||| ||||||||||||||||||| |||| |||    
T  22107102 acgagattgaacctga-----------aattaaacttgtgggattctgacctgaactcaccatggcgagcagaggctctcgcctcgcgagtgacccggaa 22107190  T
Q  214 acaaagtgtcttgt 227  Q
    | | |||| |||||    
T  22107191 atagagtgccttgt 22107204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 203
Target Start/End: Original strand, 22959166 - 22959339
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| || || ||||||||||| |||    
T  22959166 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 22959265  T
Q  129 aaaagattgtagaatgtaacttttg-gaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
     | ||| | ||||||| || ||||| |||  ||| ||||||||||||||  || || | ||||||||||||||||||    
T  22959266 gagagactttagaatg-aatttttgtgaa--ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 19669390 - 19669293
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||| ||  | |||||||||||    
T  19669390 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaa 19669293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 20910430 - 20910490
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  20910430 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 20910490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 37724403 - 37724318
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||| ||||||  || ||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||| ||| ||||||    
T  37724403 agagagcatgtaagattctgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagattaa 37724318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 21329127 - 21329188
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtcta 89  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||||||||||||||||||||||    
T  21329127 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtcta 21329188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 21366308 - 21366370
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  21366308 attttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 21366370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 22032792 - 22032730
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  22032792 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattaa 22032730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 23201845 - 23201783
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||| ||| ||| ||||||    
T  23201845 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagattaa 23201783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 17918804 - 17918845
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  17918804 attttgacttttgagttgaaccttagatgcttttgagtgcct 17918845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 21498649 - 21498745
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||| ||| |||||||| ||| |||||| |||| |||| |||||||||||||||||||| ||||||  |||| || ||| |||||  ||||||||||    
T  21498649 gattgcgtaattttgacctttaagttgaaccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaa 21498745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 29916616 - 29916580
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatg 65  Q
    |||||||||||||||||||||||||||||||||||||    
T  29916616 atttcgtgattttgacttttgagttgatccttagatg 29916580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 31342579 - 31342539
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  31342579 ttttgacttttgagttgaaccttagatgcttttgagtgcct 31342539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 18769647 - 18769709
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||| |||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  18769647 ttttgacttttaagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattaa 18769709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 20806024 - 20805962
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| ||||| |||||||||||||||| || |||| || ||| |||||    
T  20806024 attttgacttttgagttgaaccttatatgcttttgagtgccttaagatgtttattaaagatta 20805962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 21887300 - 21887238
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| ||||||    
T  21887300 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagattaa 21887238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 1858621 - 1858666
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||||    
T  1858621 atttcgtaatttggacttttgagttgaaccttagatgcttttgagt 1858666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 22144508 - 22144364
Alignment:
Q  59 ttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattgtagaatgtaacttttggaatt 158  Q
    ||||||| |||||||||||||||||||| ||| || ||||| |||||| | |||  |||||||||| ||| ||  |||  ||||||  | |||||| | |    
T  22144508 ttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatg-gatttttgggagt 22144410  T
Q  159 ctgacctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
       |||||||||||||| ||| || | |||||||||||||||||||    
T  22144409 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 22144364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 15441583 - 15441694
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  15441583 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 15441682  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  15441683 gacaagattgaa 15441694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 21294892 - 21295003
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  21294892 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 21294991  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  21294992 gacaagattgaa 21295003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 23500993 - 23501031
Alignment:
Q  43 acttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  23500993 acttttgagttgaaccttagatgtttttgagtgcctgaa 23501031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 12028223 - 12028280
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||| |||||||||||||||||| |||  | ||||||| ||| |||||    
T  12028223 gacttttgagttgaaccttagatgcttttgagtacctttagatgtctattaaagatta 12028280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 99
Target Start/End: Original strand, 20026521 - 20026566
Alignment:
Q  54 gatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||| ||||||| |||||||||||||||||||| |||||| |||||    
T  20026521 gatctttagatgattttgagtgcctgaacatgtataataatgatta 20026566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 21501919 - 21501968
Alignment:
Q  162 acctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccag 211  Q
    |||||||||||||| ||| || | ||||||||||||||||||| ||||||    
T  21501919 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccag 21501968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 23512579 - 23512522
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||| ||||||||| |||||||||||| || |||| || ||| |||||    
T  23512579 gacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagatta 23512522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 26681038 - 26680981
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||| |||||||||||||||||| |||  | ||||||| ||| |||||    
T  26681038 gacttttgagttgaaccttagatgcttttgagtacctttagatgtctactaaagatta 26680981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 26704552 - 26704499
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||  ||||||||||||||||||| || |||||  |||||||||||||||    
T  26704552 gatttcgaaattttgacttttgagttgaaccctagatatttttgagtgcctgaa 26704499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 26952645 - 26952588
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||| |||||||||||||||||| |||  | ||||||| ||| |||||    
T  26952645 gacttttgagttgaaccttagatgcttttgagtacctttagatgtctactaaagatta 26952588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 26974285 - 26974232
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||  ||||||||||||||||||| || |||||  |||||||||||||||    
T  26974285 gatttcgaaattttgacttttgagttgaaccctagatatttttgagtgcctgaa 26974232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 4036672 - 4036636
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  4036672 ttttgacttttgagttgaaccttagatgcctttgagt 4036636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 14079624 - 14079584
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||| | ||||||||| ||||||||||||    
T  14079624 ttttgacttttgagttcaaccttagatgtttttgagtgcct 14079584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 16674604 - 16674568
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  16674604 ttttgacttttgagttgaaccttagatgcctttgagt 16674568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 17718093 - 17718129
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  17718093 ttttgacttttgagttgaaccttagatgcctttgagt 17718129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 18356779 - 18356743
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  18356779 ttttgacttttgagttgaaccttagatgcctttgagt 18356743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 18784499 - 18784463
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  18784499 ttttgacttttgagttgaaccttagatgcctttgagt 18784463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 20026706 - 20026746
Alignment:
Q  164 ctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
    |||||||||||||||| || | |||||||||||||||||||    
T  20026706 ctgaactcgccacagcgagtagaggctctcgcctcgcgagt 20026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 21340421 - 21340457
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  21340421 ttttgacttttgagttgaaccttagatgcctttgagt 21340457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 21482930 - 21482894
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  21482930 ttttgacttttgagttgaaccttagatgcctttgagt 21482894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 21884843 - 21884879
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  21884843 ttttgacttttgagttgaaccttagatgcctttgagt 21884879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 22760113 - 22760081
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||| ||||||||||||||||||    
T  22760113 gacttttgagttgaaccttagatgcttttgagt 22760081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 23535243 - 23535279
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  23535243 ttttgacttttgagttgaaccttagatgcctttgagt 23535279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 24222336 - 24222304
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||| ||||||||||||||||||    
T  24222336 gacttttgagttgaaccttagatgcttttgagt 24222304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 24532702 - 24532738
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  24532702 ttttgacttttgagttgaaccttagatgcctttgagt 24532738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 25229060 - 25229096
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  25229060 ttttgacttttgagttgaaccttagatgcctttgagt 25229096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 25293216 - 25293252
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  25293216 ttttgacttttgagttgaaccttagatgcctttgagt 25293252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 26172916 - 26172880
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  26172916 ttttgacttttgagttgaaccttagatgcctttgagt 26172880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 26665785 - 26665821
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  26665785 ttttgacttttgagttgaaccttagatgcctttgagt 26665821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 26742376 - 26742436
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||||||| || |||  | | |||||||||||||||||| |||||||||| |||||||    
T  26742376 cagagagcatgtaaaattctgagtttttgacttttgagttgaaccttagatgcctttgagt 26742436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 26937382 - 26937418
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  26937382 ttttgacttttgagttgaaccttagatgcctttgagt 26937418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 33409658 - 33409622
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  33409658 ttttgacttttgagttgaaccttagatgcctttgagt 33409622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 42805872 - 42805836
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  42805872 ttttgacttttgagttgaaccttagatgcctttgagt 42805836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 13594 - 13366
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  13594 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtagga 13495  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||| |||||||||    
T  13494 tgagattgaatctgaaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 13395  T
Q  215 caaagtgtcttgttaggtttttgcgacctt 244  Q
    |  |||||||||||||| ||||||||||||    
T  13394 ctgagtgtcttgttagg-ttttgcgacctt 13366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 34623 - 34437
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  34623 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 34524  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcga 202  Q
    ||||||||||| ||||||||| | ||||||| || ||| |  | ||||||| ||||||||||  || |||| |||||||||||||||||    
T  34523 atgagattgaacctgaaaagact-tagaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcga 34437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 2e-91; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 22779845 - 22780066
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  22779845 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22779944  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  22779945 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctaaactcgccacggcaagcaaaggctctcgcctcgcgagtaacctagaa 22780044  T
Q  214 acaaagtgtcttgttaggtttt 235  Q
    ||| |||||| |||||||||||    
T  22780045 acagagtgtcctgttaggtttt 22780066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 19303159 - 19303384
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  19303159 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 19303258  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||| || |||| |||||||||||||| |||| ||||||||    
T  19303259 atgagattgaacctgaaaagatt-tagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgagagtgacccagaa 19303357  T
Q  214 acaaagtgtcttgttaggtttttgcga 240  Q
    ||| |||| ||||||||| ||||||||    
T  19303358 acagagtgccttgttaggattttgcga 19303384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 18409445 - 18409674
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||     
T  18409445 cagagagcatgcaggatttcgtgattttgacctttgagttgatccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtaga 18409544  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||||||| ||||||||||||||||||||||| || |||| ||||||||||||| | ||| ||||||||    
T  18409545 atgagattgaacctggaaagatt-tagaatgaaactttttgaattctgacctgaactcgccacggcgagcagaggctctcgcctctctagtgacccagaa 18409643  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||||| |||| |||||||    
T  18409644 acagagtgccttgttaggattttacgacctt 18409674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 32 - 244
Target Start/End: Complemental strand, 29061025 - 29060814
Alignment:
Q  32 tcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaa 131  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||| ||| ||    
T  29061025 tcgtgatttcgacttttgagttgatccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaa 29060926  T
Q  132 agattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgttagg 231  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  | || | ||||||||||||||||||| ||||||||||| |||| |||||||||    
T  29060925 agattgtagaatg-aacttttggaaatctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 29060827  T
Q  232 tttttgcgacctt 244  Q
     ||||||||||||    
T  29060826 attttgcgacctt 29060814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 14 - 231
Target Start/End: Original strand, 17287414 - 17287631
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  17287414 cagagagcatgcaagatttcgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 17287513  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||| ||||| | ||| ||||||||||||||| ||||| ||| |||||||||| |||||||||| || |  | ||||||| | |||| |||| ||||||||    
T  17287514 atgtgattgtacctggaaagattgtagaatgaaacttgtgggattctgacctaaactcgccacggcgattagaggctcttgtctcgtgagtgacccagaa 17287613  T
Q  214 acaaagtgtcttgttagg 231  Q
    ||| ||||||||||||||    
T  17287614 acagagtgtcttgttagg 17287631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 20594276 - 20594051
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||  | ||||| | |||||||||||    
T  20594276 cagagagcttgcaagatttcgtgatttttacttttgagttgatccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtagg 20594177  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||  ||||||||||| |||||||||||||||| || || |||| ||||||||||||||||||| ||| ||||    
T  20594176 atgagattgaacctggaaagattgtagaat-aaacttttggaaatctgacctgaactcgctacggcgagcagaggctctcgcctcgcgagtgacctagaa 20594078  T
Q  214 acaaagtgtcttgttaggtttttgcga 240  Q
    ||| |||| ||||||||| ||||||||    
T  20594077 acagagtgccttgttaggattttgcga 20594051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 205
Target Start/End: Original strand, 29808501 - 29808692
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||     
T  29808501 cagagagcatgtaagatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtaga 29808600  T
Q  114 atgagattgaatctgaaaaga-ttgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    ||||||||||| ||| ||||| || ||||||| |||||| |||| ||||||||||||||||||  || |||| ||||||||||||||||||||    
T  29808601 atgagattgaacctggaaagatttttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagta 29808692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 205
Target Start/End: Original strand, 28496091 - 28496281
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||     
T  28496091 cagagagcatgtaagatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtaga 28496190  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    ||||||||||| ||| ||||| | ||||||| ||||||||  | ||||||||||||||||||  || |||| ||||||||||||||||||||    
T  28496191 atgagattgaacctggaaagact-tagaatgaaacttttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagta 28496281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 20637915 - 20638130
Alignment:
Q  17 agagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatg 116  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20637915 agagcatccaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 20638014  T
Q  117 agattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaaca 216  Q
    |||||||| |||           ||||| ||||| ||| ||||||||||||||||||||| || |||| |||||||| |||||||||| |||||||||||    
T  20638015 agattgaacctg-----------gaatgaaacttgtgggattctgacctgaactcgccacggcgagcaaaggctctcacctcgcgagtgacccagaaaca 20638103  T
Q  217 aagtgtcttgttaggtttttgcgacctt 244  Q
     |||| ||||||| | ||||||||||||    
T  20638104 gagtgccttgtta-gattttgcgacctt 20638130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 20360601 - 20360807
Alignment:
Q  26 aagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaat 125  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||     
T  20360601 aagatttcgtgtttttgacttttcagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 20360700  T
Q  126 ctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtctt 225  Q
    |||           ||||| ||||| ||| ||||||||||||||||||||  || |||  ||||||||||||||||||| ||||||||||| |||| |||    
T  20360701 ctg-----------gaatgaaacttgtgggattctgacctgaactcgccatggcgagctgaggctctcgcctcgcgagtgacccagaaacagagtgactt 20360789  T
Q  226 gttaggtttttgcgacctt 244  Q
    |||||| ||||||||||||    
T  20360790 gttagg-ttttgcgacctt 20360807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 16920263 - 16920480
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||  |||||||||||||    
T  16920263 agagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtagga 16920362  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    | |||||| | |||           ||||  ||||| ||||||||||||||||||||||||  || |||| |||||||||||| |||||| |||||||||    
T  16920363 taagattgtacctg-----------gaattaaacttatggaattctgacctgaactcgccatggcgagcagaggctctcgccttgcgagtgacccagaaa 16920451  T
Q  215 caaagtgtcttgttaggtttttgcgacctt 244  Q
    ||||||| |||||| || ||||||||||||    
T  16920452 caaagtgacttgtt-ggattttgcgacctt 16920480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 244
Target Start/End: Original strand, 18821463 - 18821666
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||| |||    
T  18821463 atttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 18821562  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgtt 228  Q
               ||||| ||||| ||| ||||||||||||||||||||  || |||| ||||||||||||||||||  ||||||||||| |||| ||||||    
T  18821563 -----------gaatgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtt 18821651  T
Q  229 aggtttttgcgacctt 244  Q
    | | ||||||||||||    
T  18821652 a-gattttgcgacctt 18821666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 1561806 - 1561622
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||     
T  1561806 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtaga 1561707  T
Q  114 atgagattgaatctgaaaagattgtagaatg-taacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcg 199  Q
    ||||||||||| ||| ||| | | |||||||  ||||||||  | ||||||| ||||| ||||| || |||||||||||||||||||    
T  1561706 atgagattgaacctggaaaaact-tagaatgaaaacttttgagaatctgacc-gaacttgccacggcgagcataggctctcgcctcg 1561622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 21939886 - 21939699
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||  ||||| |||||||||||||    
T  21939886 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtagg 21939787  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||  ||| ||||| | ||||||  |||||| |  | ||||| ||||||||||||  || |||| ||||||||||||||||||    
T  21939786 atgagattgagcctggaaagact-tagaataaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 21939699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 25611347 - 25611530
Alignment:
Q  20 gcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgaga 119  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||  ||||| || ||||||    
T  25611347 gcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgaga 25611446  T
Q  120 ttgaatctgaaaagattgtagaatgtaac-ttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||| | ||| ||||| | ||||||| |||   || | ||||||||||||||||||||  |  |||| ||||||||||||||||||    
T  25611447 ttggacctggaaagact-tagaatgaaacaacttaggattctgacctgaactcgccatggagagcagaggctctcgcctcgcgag 25611530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 241
Target Start/End: Original strand, 25628983 - 25629199
Alignment:
Q  24 gcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattga 123  Q
    |||||||||| |||||||||||||| |||||| ||||||||| | || || |||| ||||| |||| ||| ||||| |||| | ||||| ||||||||||    
T  25628983 gcaagatttcatgattttgactttttagttgaaccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattga 25629082  T
Q  124 atctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtc 223  Q
    | ||| ||| ||| ||||||  ||||||||  ||| ||||||| |||||||   || |||| ||||||||||||||||||| ||||||||||| |||| |    
T  25629083 acctggaaatattttagaat-aaacttttgtgattatgacctgtactcgccgtggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgcc 25629181  T
Q  224 ttgttaggtttttgcgac 241  Q
    |||||||| |||||||||    
T  25629182 ttgttaggattttgcgac 25629199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 4185441 - 4185629
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||     
T  4185441 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtaga 4185540  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttg-gaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
     |||||||||| ||| ||||| | ||||||| || ||||| |||  ||| ||||||||||||||  || || | ||||||||||||||||||    
T  4185541 gtgagattgaacctggaaagagtttagaatg-aatttttgtgaa--ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4185629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 4667831 - 4668019
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||     
T  4667831 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4667930  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttg-gaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
     |||||||| | ||| ||||| | ||||||| || ||||| |||  ||| ||||||||||||||  || || | ||||||||||||||||||    
T  4667931 gtgagattggacctggaaagagtttagaatg-aatttttgtgaa--ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4668019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 22831994 - 22831776
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||  |||||||||||||||  |||||   |||||| ||||    
T  22831994 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatatagg 22831895  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    | ||||||||| |||           ||||  ||||  ||| ||||| ||||||||||||||| || |||| ||||||||||||||||||| ||| ||||    
T  22831894 acgagattgaacctg-----------gaattaaactgatgggattctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccgagaa 22831806  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| |||||| || ||||||||||||    
T  22831805 acagagtgacttgtt-ggattttgcgacctt 22831776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 18457202 - 18457107
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| |||||||||||    
T  18457202 atttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaa 18457107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 201
Target Start/End: Complemental strand, 19652685 - 19652512
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  19652685 agatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacc 19652586  T
Q  127 tgaaaagattgtagaatgtaacttttg-gaattctgacctgaactcgccacagcaagcataggctctcgcctcgcg 201  Q
    || ||||| | ||||||| || ||||| ||||| | ||||||||||||||  || || | ||||||||||||||||    
T  19652585 tggaaagactttagaatg-aatttttgtgaattgt-acctgaactcgccatggcgagtagaggctctcgcctcgcg 19652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 4674678 - 4674808
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||     
T  4674678 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4674777  T
Q  114 atgagattgaatctgaaaagattgtagaatg 144  Q
     |||||||| | ||| ||||| | |||||||    
T  4674778 gtgagattggacctggaaagagtttagaatg 4674808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 15894049 - 15894237
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||| ||  ||||||| ||    
T  15894049 agagagcatgcaagatttcgtacttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaaga 15894148  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaa-cttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    |||||||| | ||| ||||| | ||||||| ||    |||| ||||||||||||||||||||  || |||| || ||||| |||||||||    
T  15894149 tgagattggacctggaaagact-tagaatgaaagaacttgggattctgacctgaactcgccatggcgagcagagtctctcacctcgcgag 15894237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 4189459 - 4189329
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||| ||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||     
T  4189459 cagagagcatgcaagattctgtgttttttacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4189360  T
Q  114 atgagattgaatctgaaaagattgtagaatg 144  Q
     |||||||| | ||| ||||| | |||||||    
T  4189359 gtgagattggacctggaaagagtttagaatg 4189329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 31155016 - 31155137
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||  ||  |||||||||||||| ||| ||||||||||||||||||||||||| | ||||||||||||||  ||||||||||||     
T  31155016 cagagagcatgcaagattctgtttttttgacttttgagatgacccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtaga 31155115  T
Q  114 atgagattgaatctgaaaagat 135  Q
    ||||||||||| ||| ||||||    
T  31155116 atgagattgaacctggaaagat 31155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 22334500 - 22334608
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||| ||  ||||||| |    
T  22334500 cagagagcatgcaagatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaag 22334599  T
Q  114 atgagattg 122  Q
    |||||||||    
T  22334600 atgagattg 22334608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 11185994 - 11185776
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||| ||||||||||   ||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||  |||||   |||| ||||||    
T  11185994 cagagagcatgtaagatttcgtatatttgatttttgagttgaaccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtagg 11185895  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    | ||||||||| |||           ||||  ||||| ||| ||||| ||||||||||||||| || |||| |||| ||||||||| |||| ||||||||    
T  11185894 acgagattgaacctg-----------gaattaaacttatgggattctaacctgaactcgccacggcgagcagaggccctcgcctcgtgagtgacccagaa 11185806  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  11185805 acatagtgacttgtta-gattttgcgacctt 11185776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 25603003 - 25603188
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| | | || |||||||||||||||||||||||||| ||||| ||  ||||| | |    
T  25603003 cagagagcatgcaagatttcgtgattttaacttttgagttgaacctgaaacgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcatg 25603102  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaac-ttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcg 199  Q
    ||||||||| | ||| ||||| | ||||||| |||   || | |||||||| ||||||| |||  || |||| ||||||||||||||    
T  25603103 atgagattggacctggaaagact-tagaatgaaacaacttaggattctgacttgaactcaccatggcgagcagaggctctcgcctcg 25603188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 22439302 - 22439230
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  22439302 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 22439230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 31164473 - 31164584
Alignment:
Q  11 gagcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgt 110  Q
    |||||||||||||||||||||| |  |||||||| ||||||||||| ||| ||||   ||||||||||||||||  ||| ||| ||||| ||| ||||||    
T  31164473 gagcagagagcatgcaagattttgcaattttgacatttgagttgatacttggatgtccttgagtgcctgaacatacctagtaatgattaggaatgaatgt 31164572  T
Q  111 aggatgagattg 122  Q
    ||||||||||||    
T  31164573 aggatgagattg 31164584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 19863480 - 19863394
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||| ||||||||||  |||||||||||||||||| ||||||||| ||||||||||||||| ||| ||| ||| ||||||    
T  19863480 cagagagcatgtaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagattaa 19863394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 27332916 - 27333089
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatct 127  Q
    |||||| | |||||||| ||| |||||| ||||||||||||||||||| |||||||||| |||| | ||||| |||||| | ||| ||||| ||||| ||    
T  27332916 gatttcataattttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacct 27333015  T
Q  128 gaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcga 202  Q
    | ||||||| ||||||| || |||||  | |   ||||||||||||||  || || | |||||||||||||||||    
T  27333016 ggaaagattttagaatg-aagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27333089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 27393656 - 27393829
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatct 127  Q
    |||||| | |||||||| ||| |||||| ||||||||||||||||||| |||||||||| |||| | ||||| |||||| | ||| ||||| ||||| ||    
T  27393656 gatttcataattttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacct 27393755  T
Q  128 gaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcga 202  Q
    | ||||||| ||||||| || |||||  | |   ||||||||||||||  || || | |||||||||||||||||    
T  27393756 ggaaagattttagaatg-aagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 27415572 - 27415632
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  27415572 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 27415632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 22432752 - 22432666
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||||||||||| ||  |||||||||||||||||| ||||||||| |||||||||| |||| |||| || ||| ||||||    
T  22432752 cagagagcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcatgaagatgtatattaaagattaa 22432666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 18180974 - 18180904
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| |||||    
T  18180974 atttcgtgattttgacttttgagttgaaccttagatgtttttgagtgccttaagatgtttattaaagatta 18180904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 25641802 - 25641888
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||| ||||||| ||  ||| |||||||||||||| ||||||||| ||||||||||||||| |||| || ||| ||||||    
T  25641802 cagagagcatgtaagattttgtagtttggacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagattaa 25641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 25956253 - 25956323
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatt 98  Q
    |||||||| |||||||||||| ||||||  |||||||  ||||||||||||||||||||||||| ||||||    
T  25956253 gatttcgtaattttgacttttaagttgaatcttagatatttttgagtgcctgaacatgtctaattacgatt 25956323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 23019896 - 23019800
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||||  |||||||  || |||||| |||||||||||||||||||||||||||||| | |||| ||||| |||||| | |||  ||||||||||    
T  23019896 gatttcgtagttttgacccttaagttgaaccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaa 23019800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 21834533 - 21834594
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  21834533 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaaaatgtttattaaagatta 21834594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 16523045 - 16523107
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| ||||||||||||||||| |||| || |||| || ||| |||||    
T  16523045 attttgacttttgagttgaaccttagatgcttttgagcgccttaagatgtttattaaagatta 16523107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 21739665 - 21739726
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| |||||    
T  21739665 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttactaaagatta 21739726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 22080391 - 22080440
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||| |||||    
T  22080391 agttgaaccttagatgtttttgagtgactgaacatgtctaataatgatta 22080440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 15041192 - 15041248
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataa 93  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||| ||||||    
T  15041192 attttgacttttgagttataccttagatgtttttgagtgcctgaagatgtttaataa 15041248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 22429684 - 22429724
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  22429684 ttttgacttttgagttgaaccttagatgcttctgagtgcct 22429724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 22059362 - 22059429
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||||||   |||||||||||||| |  | |||||||| ||||||||| |||||||||||||||    
T  22059362 cagagagcatgttggatttcgtgattttaagctgtgagttgaaccttagatgtttttgagtgcctgaa 22059429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 22331917 - 22331806
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  22331917 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 22331818  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  22331817 gacaagattgaa 22331806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 22405709 - 22405748
Alignment:
Q  39 tttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  22405709 tttgacttttgagttgaaccttagatgctttagagtgcct 22405748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 25644811 - 25644760
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctg 79  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||||||||||||    
T  25644811 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctg 25644760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 1587385 - 1587421
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  1587385 ttttgacttttgagttgaaccttagatgcctttgagt 1587421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 2684995 - 2685031
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  2684995 ttttgacttttgagttgaaccttagatgcctttgagt 2685031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 5616468 - 5616504
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  5616468 ttttgacttttgagttgaaccttagatgcctttgagt 5616504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 12496760 - 12496724
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  12496760 ttttgacttttgagttgaaccttagatgcatttgagt 12496724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 12707140 - 12707104
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  12707140 ttttgacttttgagttgaaccttagatgcctttgagt 12707104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 14099104 - 14099004
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    ||||||||||||  |||||| ||| ||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  14099104 gcagagagcatgttagattttgtgttttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14099005  T
Q  113 g 113  Q
    |    
T  14099004 g 14099004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 16741659 - 16741623
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  16741659 ttttgacttttgagttgaaccttagatgcctttgagt 16741623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 17804649 - 17804613
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  17804649 ttttgacttttgagttgaaccttagatgcctttgagt 17804613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 19663220 - 19663184
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  19663220 ttttgacttttgagttgaaccttagatgcctttgagt 19663184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 20803206 - 20803242
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  20803206 ttttgacttttgagttgaaccttagatgcctttgagt 20803242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 21702739 - 21702703
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  21702739 ttttgacttttgagttgaaccttagatgcctttgagt 21702703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 25766822 - 25766858
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  25766822 ttttgacttttgagttgaaccttagatgcctttgagt 25766858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 26687390 - 26687169
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  26687390 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtagg 26687291  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  26687290 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 26687191  T
Q  214 acaaagtgtcttgttaggtttt 235  Q
    ||| ||||||||||||||||||    
T  26687190 acagagtgtcttgttaggtttt 26687169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 18439037 - 18438808
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||      
T  18439037 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaa 18438938  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||| | ||||| || |||| ||||||||||||||||||| ||||||||    
T  18438937 atgagattgaacctggaaagatt-tagaatgaaacttttggaattctgacctgaagttgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 18438839  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||||||||||||||||||||||||||    
T  18438838 acagagtgtcttgttaggtttttgcgacctt 18438808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 40213339 - 40213568
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  40213339 cagagagcttgcaagatttcgtgattttgacttttgagttgatcattagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 40213438  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||| ||||||||| | ||| ||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  40213439 atgagattgaacctggaaagattgtagaatg-aacttttgggaatctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 40213537  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||||| ||||||||||||    
T  40213538 acagagtgccttgttaggattttgcgacctt 40213568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 11424381 - 11424610
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||     
T  11424381 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtaga 11424480  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||||||| ||| ||||||||||||||||||| || || | ||||||||||||||||||  ||| ||||    
T  11424481 atgagattgaacctggaaagatt-tagaatgaaactttttgaactctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagcgacctagaa 11424579  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||||||||||||||||||||||||||    
T  11424580 acagagtgtcttgttaggtttttgcgacctt 11424610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 14973357 - 14973132
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  14973357 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 14973258  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||||||| || | ||||||||| ||||| | ||||||||||||||||||||||||||||||| || |||| ||||||||||||||| ||| ||||||||    
T  14973257 atgagattaaaccagaaaagattttagaaag-aacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaa 14973159  T
Q  214 acaaagtgtcttgttaggtttttgcga 240  Q
    ||| |||| ||||||||| ||||||||    
T  14973158 acagagtgccttgttaggattttgcga 14973132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 25476003 - 25476232
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| ||||||||||||     
T  25476003 cagagagcatgcaagattttgtgattttgacttttgagttgatccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtaga 25476102  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||| ||| ||| ||||||| ||||||| ||||||||||| |||||||||||||||||||  | || | ||||||||||||||||||| ||||||||    
T  25476103 atgagatcgaacctggaaagattttagaatgaaacttttggaa-tctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaa 25476201  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||||| ||||||||||||    
T  25476202 acagagtgccttgttaggattttgcgacctt 25476232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 14576451 - 14576680
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||  |||||||||||     
T  14576451 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtaga 14576550  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||| |||||| ||| ||||| | ||||||| ||| ||||||| |||||||||||| |||||| || || | ||||||||||||||||||| ||| ||||    
T  14576551 atgacattgaacctggaaagact-tagaatgaaacctttggaaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacctagaa 14576649  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    |||||||| ||||||||| ||||||||||||    
T  14576650 acaaagtgccttgttaggattttgcgacctt 14576680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 17488359 - 17488130
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  17488359 agagagcatgcaagatttcgtgaatttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 17488260  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccag-aa 213  Q
    |||||||||| ||| ||||||||||||||| ||||| | | ||||||||||||| ||||||| || |||| ||||||||||||||||||| ||| || ||    
T  17488259 tgagattgaacctggaaagattgtagaatgaaacttgtaggattctgacctgaaatcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaa 17488160  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  17488159 acagagtgccttgtta-gattttgcgacctt 17488130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 14573088 - 14572862
Alignment:
Q  17 agagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatg 116  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| |||    
T  14573088 agagcatgcaagattttgtgtttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatg 14572989  T
Q  117 agattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaaca 216  Q
    |||||||| ||| ||||| | ||||||| ||| ||||||| ||||||||||||||||||  || || | ||||||||||||||||||| ||| |||||||    
T  14572988 agattgaacctggaaagact-tagaatgaaacctttggaaatctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaaca 14572890  T
Q  217 aagtgtcttgttaggtttttgcgacctt 244  Q
     |||  ||||||||||||||||||||||    
T  14572889 gagtaccttgttaggtttttgcgacctt 14572862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 17247904 - 17248100
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||     
T  17247904 cagagaggttgcaagatttcgtgattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 17248003  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccag 211  Q
    ||||||||||| ||| ||||||| ||||||| |||||| |||| ||||||||||||||||||  || |||| ||||||||||||||||||| ||||||    
T  17248004 atgagattgaacctggaaagattttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 17248100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 17499841 - 17499612
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  17499841 agagagaatgcaagatttcatgattttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 17499742  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccag-aa 213  Q
    |||||||||| ||| ||||||||||||||| ||||| | | ||||||||||||| ||||||| |  |||| ||||||||||||| | ||| ||| || ||    
T  17499741 tgagattgaacctggaaagattgtagaatgaaacttgttggattctgacctgaattcgccacggtgagcagaggctctcgcctctctagtgacctagaaa 17499642  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  17499641 acagagtgccttgtta-gattttgcgacctt 17499612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 20698065 - 20698283
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  20698065 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagg 20698164  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||| ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  20698165 atgagattgaacctg-----------gaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 20698253  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  20698254 acagagtgacttgtta-gattttgcgacctt 20698283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 23082979 - 23083208
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||  ||||| || | ||||||||    
T  23082979 cagagagcatgtcagattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtagg 23083078  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctga-cctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccaga 212  Q
    ||||||||| | ||| ||||||| ||||||| ||||||| | ||||||| ||| |||||||||  || || | ||||||||||||||||| | |||||||    
T  23083079 atgagattggacctggaaagatt-tagaatgaaactttttggattctgacccttaactcgccatggcgagtagaggctctcgcctcgcgaatgacccaga 23083177  T
Q  213 aacaaagtgtcttgttaggtttttgcgacctt 244  Q
    |||| |||||||||||||| ||||||||||||    
T  23083178 aacatagtgtcttgttagg-ttttgcgacctt 23083208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 66 - 244
Target Start/End: Complemental strand, 13442725 - 13442548
Alignment:
Q  66 cttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacct 165  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||    
T  13442725 cttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacct 13442626  T
Q  166 gaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||||| ||||| || |||| ||||||||||||||||||| ||||||||||| |||| ||||||| | ||||||||||||    
T  13442625 gaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctt 13442548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 12340255 - 12340068
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||| |||||||||||||    
T  12340255 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 12340156  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||||| | ||||||| |||||| |  | ||| | ||||||||||||  || |||| ||||||||||||||||||    
T  12340155 atgagattgaacctggaaagact-tagaatgaaactttggagaatct-aactgaactcgccatggcgagcagaggctctcgcctcgcgag 12340068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 12851984 - 12852169
Alignment:
Q  16 gagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggat 115  Q
    |||||||||||||||||||||||||||||||||||||| | | ||||||||  ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  12851984 gagagcatgcaagatttcgtgattttgacttttgagtttaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggat 12852083  T
Q  116 gagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||||| ||||| | ||||||| ||||||||  | ||||| ||||||||||||  || |||| ||||||| ||||||||||    
T  12852084 gagattgaatctggaaagact-tagaatgaaacttttgataatctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 12852169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 53070321 - 53070505
Alignment:
Q  18 gagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatga 117  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||    
T  53070321 gagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatga 53070420  T
Q  118 gattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
    ||||||| ||| |   |||  |||||| ||||||| | |  |||||||||||||||||  || || | |||||||||||||||||||    
T  53070421 gattgaacctggattaatt-aagaatg-aactttttggaagctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 53070505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 14669263 - 14669076
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||||  || || |||||||||||||    
T  14669263 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatgtctaatattgaataggaaagaatgtagg 14669164  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||||| | ||||||| |||||| |  | ||||| ||||||||||||  || |||| |||||||| |||||||||    
T  14669163 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcacctcgcgag 14669076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 43842681 - 43842572
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  43842681 cagagagcatgcaagatttcatgattttgactttttagttgatccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtagg 43842582  T
Q  114 atgagattga 123  Q
    ||||||||||    
T  43842581 atgagattga 43842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 14179825 - 14179715
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  14179825 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 14179726  T
Q  114 atgagattgaa 124  Q
    |||||||||||    
T  14179725 atgagattgaa 14179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 14666108 - 14665921
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||   ||||||||||||||||| ||||||  ||||| |||||||||||||    
T  14666108 cagagagcatgcaagattttatgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtagg 14666009  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||||| | ||||||| |||||| |  | ||||| |||||||||| |  || |||| ||||||||||||||||||    
T  14666008 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgcaatggcgagcagaggctctcgcctcgcgag 14665921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 14735621 - 14735434
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||   ||||||||||||||||| ||||||  ||||| |||||||||||||    
T  14735621 cagagagcatgcaagattttatgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtagg 14735522  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||||| | ||||||| |||||| |  | ||||| |||||||||| |  || |||| ||||||||||||||||||    
T  14735521 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgcaatggcgagcagaggctctcgcctcgcgag 14735434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 119 - 244
Target Start/End: Complemental strand, 43841330 - 43841206
Alignment:
Q  119 attgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaa 218  Q
    |||||| ||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||| |    
T  43841330 attgaacctggaaagattgtagaatgaaacttgtggaattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacccagaaacaga 43841231  T
Q  219 gtgtcttgttaggtttttgcgacctt 244  Q
    ||||||||||||| ||||||||||||    
T  43841230 gtgtcttgttagg-ttttgcgacctt 43841206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 30030331 - 30030150
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||| |||||||||| ||    
T  30030331 cagagagcatgcaagatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtggg 30030232  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaac-ttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaa 206  Q
    ||||||||||| |||           ||||| |||  |||||||||||||||| |||||||||  || |||| |||||||||||||||||||||    
T  30030231 atgagattgaacctg-----------gaatgaaacagtttggaattctgacct-aactcgccatggcgagcagaggctctcgcctcgcgagtaa 30030150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 216
Target Start/End: Complemental strand, 12399698 - 12399507
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||| |||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| ||| ||||    
T  12399698 cagagagcatgctagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatatagg 12399599  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||| | ||||| |||           ||||| ||||| ||   |||||||||||||||||||| || || | ||||||||||||| ||||| ||||||||    
T  12399598 atgggtttgaacctg-----------gaatgaaacttgtgaggttctgacctgaactcgccacggcgagtaaaggctctcgcctcacgagtgacccagaa 12399510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 12933941 - 12934118
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| |  || ||||||||||| |    
T  12933941 agatttcgtacttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacc 12934040  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    || ||||||| ||||||| || |||  |||  ||| ||||||||||||||  || |||| || |||||||||||||||||    
T  12934041 tggaaagattttagaatgaaattttgtgaa--ctgaacctgaactcgccatggcgagcagagactctcgcctcgcgagta 12934118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 32308158 - 32307982
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| || || ||||||||||| |    
T  32308158 agatttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacc 32308059  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    |   |||| | ||||||| || ||| ||||  ||| ||||||||||||||  || |||| ||||||||||||||||||||    
T  32308058 taggaagactttagaatg-aattttgggaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagta 32307982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 9513400 - 9513274
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |  || ||||||||||| |    
T  9513400 agatttcgtactattgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacc 9513301  T
Q  127 tgaaaagattgtagaatgtaacttttg 153  Q
    |||||||||| ||||||| || |||||    
T  9513300 tgaaaagattttagaatgaaatttttg 9513274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 9521375 - 9521249
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |  || ||||||||||| |    
T  9521375 agatttcgtactattgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacc 9521276  T
Q  127 tgaaaagattgtagaatgtaacttttg 153  Q
    |||||||||| ||||||| || |||||    
T  9521275 tgaaaagattttagaatgaaatttttg 9521249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 17247142 - 17247236
Alignment:
Q  18 gagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  17247142 gagcttgcaagatttcgtgattttgacttttgagttgatccttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtag 17247236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 16097820 - 16097645
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||  |||| |||||| || || ||||||||||| |    
T  16097820 agatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacc 16097721  T
Q  127 tgaaaagattgtagaatgtaacttttg-gaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    |||||||||| ||||||| || ||||| |||||  |||||||||||||||  |  || | ||||||||||||||||||    
T  16097720 tgaaaagattttagaatg-aatttttgtgaatt-ggacctgaactcgccatggtgagtagaggctctcgcctcgcgag 16097645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 13209946 - 13210065
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||| |||||||||||| | ||||| ||||||| ||||     
T  13209946 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctaat-atgattaggaaagaaagtaga 13210044  T
Q  114 atgagattgaatctgaaaaga 134  Q
    ||||||||||| ||| |||||    
T  13210045 atgagattgaacctggaaaga 13210065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 4588457 - 4588569
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattg 137  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| ||| ||||| |     
T  4588457 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctgtaaagact- 4588555  T
Q  138 tagaatgtaacttt 151  Q
    ||||||| ||||||    
T  4588556 tagaatgaaacttt 4588569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 49389275 - 49389372
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| || || |||||||||||    
T  49389275 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaa 49389372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 1644314 - 1644490
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| ||||| |||||| |  || ||||||||||| |    
T  1644314 agatttcgtaattttgacttttgagttgatccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacc 1644413  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    ||| |||| | ||||||| || |||  |||  ||| ||||||||||||||  || |||| ||||||||||||||||||||    
T  1644414 tgagaagactttagaatg-aattttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagta 1644490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 49667715 - 49667891
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |||||| |  || ||||||||||| |    
T  49667715 agatttcgtacttttgacttttgagttgatccttagatg-ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacc 49667813  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    || ||||||| ||||||| ||  ||  |||  ||| ||||||||||||||  || |||| ||||||||||||||||||||    
T  49667814 tggaaagattttagaatgaaatattgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagta 49667891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 16104268 - 16104173
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||| |||||| || || ||||| |||||    
T  16104268 atttcgtaattttgacttttgagttgatccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaa 16104173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 16809887 - 16809783
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||| |||||||||  |||||||||||||||||| ||||| |||||||||||||| ||||||    |||||| ||||| ||||||||||||||    
T  16809887 agagagcatgctagatttcgtatttttgacttttgagttgaaccttaaatgcttttgagtgcttgaaca----taataatgattaggaaagaatgtagga 16809792  T
Q  115 tgagattga 123  Q
    |||||||||    
T  16809791 tgagattga 16809783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 12171750 - 12171827
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaaga 106  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  12171750 atttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 12171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 15877447 - 15877533
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||||||||||||| ||| ||| ||| ||||||    
T  15877447 cagagagcatgcaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagattaa 15877533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 15471413 - 15471335
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaaga 106  Q
    |||||||| |||||||| |||||||||| ||||||||| |||||||| ||||||||||| |||| | ||||| ||||||    
T  15471413 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaaga 15471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 17674209 - 17674258
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  17674209 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 17674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 204
Target Start/End: Complemental strand, 324702 - 324549
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaaga-ttgtagaatgtaac 148  Q
    |||||| | ||||||| ||||||||||||||| |||| |||||| ||||| |||||| ||||| ||||||||||| |||| || | ||  |||||| ||     
T  324702 agttgaactttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaa-ctgagaatagtttaagaatg-aat 324605  T
Q  149 ttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
    |||||| | |   |||||||||||||| ||| || | |||||||||||||||||||    
T  324604 ttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 324549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 15060768 - 15060705
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  15060768 attttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattaa 15060705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 23408928 - 23408846
Alignment:
Q  17 agagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||||||||  || |||||||||||| ||| ||| ||| ||||||    
T  23408928 agagcatgcaagaattcgtaattttgacttttgagttgaaccttagat-attatgagtgcctgaagatgcctattaaagattaa 23408846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 12496731 - 12496669
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  12496731 attttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 12496669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 18383559 - 18383621
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  18383559 attttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 18383621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 3402608 - 3402649
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  3402608 attttgacttttgagttgaaccttagatgcttttgagtgcct 3402649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 3389600 - 3389640
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  3389600 ttttgacttttgagttgaaccttagatgcttttgagtgcct 3389640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 11298172 - 11298212
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  11298172 ttttgacttttgagttgaaccttagatgcttttgagtgcct 11298212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 14234979 - 14234883
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||| | |||||||| ||| |||||| ||||||||  |||||||||||||||||||| |||| | ||||| |||||| | |||  ||||||||||    
T  14234979 gatttcataattttgacctttaagttgaaccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaa 14234883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 26190652 - 26190692
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  26190652 ttttgacttttgagttgaaccttagatgcttttgagtgcct 26190692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 323065 - 323026
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgc 76  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  323065 attttgacttttgagttgaaccttagatgcttttgagtgc 323026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 12037572 - 12037639
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||||||   ||||||||||||||||| | |||||| | ||||||||| |||||||||||||||    
T  12037572 cagagagcatgttggatttcgtgattttgacatgtgagttaaaccttagatgtttttgagtgcctgaa 12037639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 15051992 - 15051929
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||| ||||||||||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  15051992 attttaacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattaa 15051929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 856611 - 856549
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||| |||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  856611 ttttgactttttagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattaa 856549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 2050855 - 2050929
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||| ||||||||| |||||||||||| ||||||| |||||| ||||| |||||| | |||  ||||||||||    
T  2050855 agttgaaccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaa 2050929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 19725546 - 19725616
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||| |||||| || ||||  ||||| |||||    
T  19725546 atttcgtaattttgacttttgagttgaaccttaaatgcttttgtgtgccttaagatgttgaataaagatta 19725616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 11852055 - 11852006
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||| ||||| |||||| |||||| ||||||||||||||||||||||    
T  11852055 atttcgtaattttaacttttcagttgaaccttagatgcttttgagtgcct 11852006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 12173261 - 12173200
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| |||||    
T  12173261 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagatta 12173200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 23077121 - 23077182
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| |||| ||||||||||||||||| || |||| || ||| |||||    
T  23077121 ttttgacttttgagttgaaccttggatgcttttgagtgccttaagatgtttattaaagatta 23077182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 321657 - 321697
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  321657 ttttgacttttgagttgaaccttagatgtttttgagtgcct 321697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 17524817 - 17524857
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  17524817 ttttgacttttgagttgaaccttagatgtttttgagtgcct 17524857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 839723 - 839612
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  839723 gcagagagcatgtaagattttgcaatttcgacttttaagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 839624  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  839623 gacaagattgaa 839612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 16369884 - 16369845
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgc 76  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  16369884 attttgacctttgagttgaaccttagatgcttttgagtgc 16369845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 23052711 - 23052762
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctga 80  Q
    |||| ||||||||||| | |||||||| ||||||||| ||||||||||||||    
T  23052711 attttgtgattttgacctgtgagttgaaccttagatgtttttgagtgcctga 23052762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 24188254 - 24188143
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  24188254 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 24188155  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  24188154 gacaagattgaa 24188143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 55149455 - 55149344
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  55149455 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 55149356  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  55149355 gacaagattgaa 55149344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 1465051 - 1465137
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||| ||| ||| || ||||||||| |||||||||||||||| ||| | || | ||||| |||||| |||||  ||||||||||    
T  1465051 ttttgacctttaagtcgaaccttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaa 1465137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 14501666 - 14501617
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||| ||||||||| ||||||||||||||| |||| |||||| |||||    
T  14501666 agttgaaccttagatgattttgagtgcctgaatatgtataataatgatta 14501617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 14878148 - 14878209
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| ||||| ||| |||||||||||| || |||| || ||| |||||    
T  14878148 ttttgacttttgagttgaaccttatatgtttttgagtgcctaaagatgtttattaaagatta 14878209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 22109929 - 22109978
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||| | ||||||| |||||||||||||||||||| |||||| |||||    
T  22109929 agttgaactttagatgtttttgagtgcctgaacatgtataataatgatta 22109978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 23275208 - 23275159
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||| ||||||||| ||||||||||||||| |||| |||||| |||||    
T  23275208 agttgaaccttagatgattttgagtgcctgaatatgtataataatgatta 23275159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 326818 - 326854
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  326818 ttttgacttttgagttgaaccttagatgcctttgagt 326854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 603258 - 603330
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    |||||||| |||||||||||||||||||||  | |||||| | || | |||| || |||| ||||||||||||    
T  603258 cagagagcttgcaagatttcgtgattttgagctgtgagtttaaccctggatgtttatgagagcctgaacatgt 603330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 1598134 - 1598170
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||| |||||||||    
T  1598134 ttttgacttttgagttgaaccttagatacttttgagt 1598170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 4291249 - 4291149
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    ||||||||||||  |||||| ||| ||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  4291249 gcagagagcatgttagattttgtgttttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 4291150  T
Q  113 g 113  Q
    |    
T  4291149 g 4291149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 7793000 - 7793036
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  7793000 ttttgacttttgagttgaaccttagatgcctttgagt 7793036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 11557043 - 11557075
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||| ||||||||||||||||||    
T  11557043 gacttttgagttgaaccttagatgcttttgagt 11557075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 11594797 - 11594829
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||| ||||||||||||||||||    
T  11594797 gacttttgagttgaaccttagatgcttttgagt 11594829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 15483114 - 15483078
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  15483114 ttttgacttttgagttgaaccttagatgcctttgagt 15483078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 15849739 - 15849775
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  15849739 ttttgacttttgagttgaaccttagatgcctttgagt 15849775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 15941558 - 15941594
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  15941558 ttttgacttttgagttgaaccttagatgcctttgagt 15941594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 16690671 - 16690635
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  16690671 ttttgacttttgagttgaaccttagatgcctttgagt 16690635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 16697244 - 16697208
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  16697244 ttttgacttttgagttgaaccttagatgcctttgagt 16697208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 16797708 - 16797744
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  16797708 ttttgacttttgagttgaaccttagatgcctttgagt 16797744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 17242424 - 17242388
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  17242424 ttttgacttttgagttgaaccttagatgcctttgagt 17242388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 20461154 - 20461190
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  20461154 ttttgacttttgagttgaaccttagatgcctttgagt 20461190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 31097208 - 31097244
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  31097208 ttttgacttttgagttgaaccttagatgcctttgagt 31097244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 38814836 - 38814800
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  38814836 ttttgacttttgagttgaaccttagatgcctttgagt 38814800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 42326404 - 42326360
Alignment:
Q  30 tttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||| ||| |||||||||||||| ||||||| ||||||||||    
T  42326404 tttcgtgttttggacttttgagttgaaccttagaagcttttgagt 42326360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 43927638 - 43927598
Alignment:
Q  59 ttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||| |||||||||||||||||||| |||||| |||||    
T  43927638 ttagatgattttgagtgcctgaacatgtataataatgatta 43927598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 34510283 - 34510054
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  34510283 cagagagcttgcaagatttcgtgattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 34510184  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||| ||||||||||||| ||||| ||||||||    
T  34510183 atgagattgaacctggaaagattgtagaatg-aacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaa 34510085  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||||| ||||||||||||||||||||    
T  34510084 acagagtgtcatgttaggtttttgcgacctt 34510054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 22532772 - 22532543
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  22532772 cagagagcatgcaagatttcgtgattttgacttttgatttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22532673  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| || |||||||||||| ||||||||||| |||||| |||||||||||| |  |||| ||||||||||||||||||| ||||| ||    
T  22532672 atgagattgaacctggaaggattgtagaatg-aacttttggaaatctgacttgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaaaa 22532574  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||||| ||||||||||||    
T  22532573 acagagtgacttgttaggattttgcgacctt 22532543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 50209832 - 50210060
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||| ||||||||||||     
T  50209832 cagagagcatgcaagattttgtgattttgacttttgagttgatc-ttatatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 50209930  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  50209931 atgagattgaacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 50210029  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||||| ||||||||||||    
T  50210030 acagagtgccttgttaggattttgcgacctt 50210060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 22354190 - 22354419
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| |||| ||||| |||| || |||||    
T  22354190 cagagagcatgcaagattttgtgattttgacttttgagttgaaccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtagg 22354289  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| | ||||||||||||| ||||| ||| ||||||||||||||||||||| || || | ||||||||||||||| ||| ||||||||    
T  22354290 atgagattgaacctggatagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcaagtgacccagaa 22354389  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||||| ||||||||||||    
T  22354390 acagagtgacttgttagg-ttttgcgacctt 22354419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 20135690 - 20135461
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||| |||| || ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  20135690 cagagagcatgcaatattttgtaattttgacttttgagtttatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagg 20135591  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaac-ttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccaga 212  Q
    ||||||||| | ||| ||||| | ||||||| ||| |||||||||||||||| ||||||||||  || |||| | |||||| ||||||||||||||||||    
T  20135590 atgagattggacctggaaagact-tagaatgaaacattttggaattctgacc-gaactcgccatggcgagcagaagctctcacctcgcgagtaacccaga 20135493  T
Q  213 aacaaagtgtcttgttaggtttttgcgacctt 244  Q
    |||| |||| |||||||||||| |||||||||    
T  20135492 aacagagtgacttgttaggtttatgcgacctt 20135461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 15 - 211
Target Start/End: Complemental strand, 433509 - 433314
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||||||| |    
T  433509 agagagcttgcaagattccgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaa 433410  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccag 211  Q
    |||||||||| ||| ||||||| ||||||| |||||| |||| ||||||||||||||||||  || |||| ||||||||||||||||||| ||||||    
T  433409 tgagattgaacctggaaagattttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 433314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 20846848 - 20847066
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||    
T  20846848 cagagagcatgcaagattttgtaattttgacctttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtagg 20846947  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||| ||||| ||   || ||||||||||||||||| || |||| ||||||| ||||||||||| ||||||||    
T  20846948 atgagattgaacctg-----------gaatgaaacttgtgaggttttgacctgaactcgccacggcgagcagaggctcttgcctcgcgagtgacccagaa 20847036  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  20847037 acagagtgacttgtta-gattttgcgacctt 20847066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 21027172 - 21026954
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||| || || |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | |||||||||||    
T  21027172 cagagagcatgcaagaatttgtaattttgacctttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtagg 21027073  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||| ||||| ||   ||||||||| |||||||||| || |||| ||||||||||||||||||| ||||||||    
T  21027072 atgagattgaacctg-----------gaatgaaacttgtgaggttctgacctaaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 21026984  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    |||||||| ||||||| | ||||||||||||    
T  21026983 acaaagtgacttgtta-gattttgcgacctt 21026954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 27250358 - 27250562
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  27250358 cagagagcatgcaagatttcgtaatattgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 27250457  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||| ||||||| |||           ||||| ||| | ||| |||||||||||||||||||||  | |||| ||||||||||||||||||| || |||||    
T  27250458 atgggattgaacctg-----------gaatgaaacctgtgggattctgacctgaactcgccacgtcgagcagaggctctcgcctcgcgagtgacacagaa 27250546  T
Q  214 acaaagtgtcttgtta 229  Q
    ||| |||  |||||||    
T  27250547 acagagtcccttgtta 27250562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 20919104 - 20918917
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||  | |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  20919104 cagagagcatgcaagattttataattttgacctttgagttgatccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 20919005  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||||||||| | |||||| ||| ||| |  | ||||| ||||||||||||  || |||| ||||||||||||||||||    
T  20919004 atgagattgaacctgaaaagact-tagaatttaaatttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 20918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 22355803 - 22355998
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  22355803 cagagaacatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22355902  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||| || || ||| ||||||||||||||||||||| || |||| ||||| |||| |||||||| ||| ||||    
T  22355903 atgagattgaacctg-----------gaatgaaatttgtgggattctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaa 22355990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 22357489 - 22357684
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  22357489 cagagaacatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22357588  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||| || || ||| ||||||||||||||||||||| || |||| ||||| |||| |||||||| ||| ||||    
T  22357589 atgagattgaacctg-----------gaatgaaatttgtgggattctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaa 22357676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 38801020 - 38801238
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||| |  |||||||||||||||||| | |||||||  |||||||||||||||||||||||||| ||||| |||||||||||||    
T  38801020 cagagagcatgcaagatttcatatttttgacttttgagttgaactttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 38801119  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||| ||||||| |||           ||||  ||||| ||| ||||||||||||||||||||| || || | ||||||||||||||||||| ||| ||||    
T  38801120 atgtgattgaacctg-----------gaattgaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaa 38801208  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  38801209 acagagtgacttgtta-gattttgcgacctt 38801238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 21301157 - 21301241
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21301157 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgatta 21301241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 33681499 - 33681316
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||| |||||| || || ||||||||||| |    
T  33681499 agatttcgtaattttgacttttgagttgatccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacc 33681400  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccag 211  Q
    || ||||||| ||||||| || |||||  | |   ||||||||||||||  || |||| ||||||||||||||||| | ||||||    
T  33681399 tggaaagattttagaatg-aatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccag 33681316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 52927612 - 52927786
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  52927612 agatttcgtaattttgacttttgagttgacccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacc 52927711  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcga 202  Q
    || ||||||| | ||||| || ||||  || |  |||||||||||||||  || || | |||| ||||||||||||    
T  52927712 tggaaagattttggaatg-aattttttaaagttagacctgaactcgccatggcgagtagaggccctcgcctcgcga 52927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 21754525 - 21754349
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| || || | ||||||||| |    
T  21754525 agatttcgtatttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacc 21754426  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    ||  |||| | ||||||| || |||  |||  ||| ||||||||||||||  || |||| ||||||||||||||||||||    
T  21754425 tgggaagactttagaatg-aattttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagta 21754349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 20091092 - 20091253
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||| |  |||||||||||||||| | |||||||||| ||||| |||||||||||||||||||  ||||| ||  ||||||| |    
T  20091092 cagagagcatgcaagatttcttatttttgacttttgagttaaaccttagatgcctttgattgcctgaacatgtctaatattgattaggagtgaatgtaag 20091191  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaac-ttttggaattctgacctgaactcgcca 175  Q
    ||||||||| | ||||||||| | ||||||| |||   |||| ||||||||||||||||||||    
T  20091192 atgagattggacctgaaaagact-tagaatgaaacaacttgggattctgacctgaactcgcca 20091253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 21162231 - 21162121
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| ||||| ||||||||||||||||||| | ||||||||||||||  ||||||||||||     
T  21162231 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtaga 21162132  T
Q  114 atgagattgaa 124  Q
    |||||||||||    
T  21162131 atgagattgaa 21162121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 22238117 - 22238010
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||| |||||| || || |||||||| || |||    
T  22238117 atttcgtaattttgacttttgagttgatccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctg 22238018  T
Q  129 aaaagatt 136  Q
     |||||||    
T  22238017 gaaagatt 22238010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 22921499 - 22921595
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||||| |||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||| || ||  ||||||||||    
T  22921499 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaa 22921595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 20248757 - 20248670
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||  | || |||||||||||    
T  20248757 attttgacttttgagttgatccatagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaa 20248670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 22468315 - 22468401
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||| ||||||||||  |||||||||||||||||| ||||||||| ||||||||||||||| ||| ||| ||| ||||||    
T  22468315 cagagagcatgtaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagattaa 22468401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 43697849 - 43697788
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtcta 89  Q
    |||||||| |||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  43697849 gatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgcctgaacatgtcta 43697788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 21715036 - 21714983
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  21715036 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 21714983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 8761252 - 8761316
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||   |||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  8761252 cagagagcatgttggatttcgtaatttggacttttgagttgaaccttagatgcttttgagtgcct 8761316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 3472560 - 3472607
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgc 76  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  3472560 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgc 3472607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 22432425 - 22432487
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  22432425 attttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 22432487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 3704731 - 3704776
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||    
T  3704731 atttcgtgttttggacttttgagttgatccttagatgcttttgagt 3704776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 18181764 - 18181825
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  18181764 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaatgatta 18181825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 21787685 - 21787746
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||| |||||||| ||||||||| |||||||||||| || |||| |||||| |||||    
T  21787685 ttttgacttgtgagttgaaccttagatgtttttgagtgcctaaagatgtttaataaagatta 21787746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 22831021 - 22831082
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| |||||    
T  22831021 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagatta 22831082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 21023115 - 21023075
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcc 77  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  21023115 attttgacttttgagttgaaccttaaatgcttttgagtgcc 21023075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 23818953 - 23818989
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  23818953 ttttgacttttgagttgaaccttagatgcttttgagt 23818989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 42864854 - 42864894
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  42864854 ttttgacttttgagttgaaccttagatgtttttgagtgcct 42864894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 45307793 - 45307721
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    |||||||| |||||||| ||||||||||||  | |||||| | ||||||||| || |||| ||||||||||||    
T  45307793 cagagagcttgcaagatctcgtgattttgagctgtgagtttaaccttagatgtttatgagggcctgaacatgt 45307721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 45489397 - 45489433
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  45489397 ttttgacttttgagttgaaccttagatgcttttgagt 45489433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 23763688 - 23763577
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  23763688 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 23763589  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  23763588 gacaagattgaa 23763577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 6152331 - 6152269
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||| |||||||||| |||||| ||||||||||||||| || |||| || ||| ||||||    
T  6152331 ttttgacctttgagttgaaccttagttgcttttgagtgcctaaagatgtttattaaagattaa 6152269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 228
Target Start/End: Original strand, 28194090 - 28194279
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattg 137  Q
    ||||||| ||| ||| || |||| |||| |||||||||||||||| ||| | || | ||||| |||||| |||||  |||||||||| ||||||   ||     
T  28194090 ttttgacctttaagtcgaaccttggatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgaaatagttt 28194189  T
Q  138 tagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgtt 228  Q
     |||||| | ||||  || ||   ||||||||||||||  ||||| | ||||||||||||||||||  |||||   ||||| |||||||||    
T  28194190 aagaatgaatctttgtgagtt-gcacctgaactcgccatggcaagtagaggctctcgcctcgcgagctacccatttacaaaatgtcttgtt 28194279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 17678240 - 17678277
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  17678240 atttggacttttgagttgaaccttagatgcttttgagt 17678277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 12647321 - 12647285
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  12647321 ttttgacttttgagttgaaccttagatgcctttgagt 12647285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 18882819 - 18882783
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  18882819 ttttgacttttgagttgaaccttagatgcctttgagt 18882783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 19212319 - 19212283
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  19212319 ttttgacttttgagttgaaccttagatgcctttgagt 19212283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 20138535 - 20138499
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  20138535 ttttgacttttgagttgaaccttagatgcctttgagt 20138499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 21305766 - 21305730
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  21305766 ttttgacttttgagttgaaccttagatgcctttgagt 21305730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 21615889 - 21615853
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  21615889 ttttgacttttgagttgaaccttagatgcctttgagt 21615853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 24087918 - 24087846
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    |||||||| |||||||||||||||||||||  | |||||| | || | |||| || |||| ||||||||||||    
T  24087918 cagagagcttgcaagatttcgtgattttgagctgtgagtttaaccctggatgtttatgagagcctgaacatgt 24087846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 24782754 - 24782790
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  24782754 ttttaacttttgagttgaaccttagatgcttttgagt 24782790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 33797985 - 33797949
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  33797985 ttttgacttttgagttgaaccttagatgcctttgagt 33797949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 46975919 - 46975883
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  46975919 tttttacttttgagttgaaccttagatgcttttgagt 46975883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 163; Significance: 4e-87; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 52415 - 52186
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  52415 cagagagcatgcaagattttttgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 52316  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  52315 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 52216  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||  |||||||||||||| ||||||||||||    
T  52215 actgagtgtcttgttagg-ttttgcgacctt 52186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 167608 - 167826
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  167608 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 167707  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |           |||| || ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  167708 atgagattgaacc-----------tagattgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 167796  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  167797 acagagtgacttgtta-gattttgcgacctt 167826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 4e-87; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 3563982 - 3564211
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  3563982 cagagagcttgcaagatttcgttattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 3564081  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||| ||||||||    
T  3564082 atgagattgaacctggaaagattgtagaatg-aacttttggaaatctgacctgaactcgccacagcgagcaaatgctctcgcctcgcgagtgacccagaa 3564180  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||||| ||||||||||||    
T  3564181 acagagtgccttgttaggattttgcgacctt 3564211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 38227982 - 38227754
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |    
T  38227982 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 38227883  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||||| ||| ||||||| ||||||| ||||||| | ||||||||||||||||||||| || |||| ||||||||||||||||||| ||||| |||    
T  38227882 tgagattgaacctggaaagatt-tagaatgaaactttttggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaa 38227784  T
Q  215 caaagtgtcttgttaggtttttgcgacctt 244  Q
    || |||| ||||||||||||||||||||||    
T  38227783 cagagtgccttgttaggtttttgcgacctt 38227754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 9509692 - 9509463
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  9509692 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 9509593  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||| || || | ||||||||||||||||||| ||||||||    
T  9509592 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgaggagaggctctcgcctcgcgagtgacccagaa 9509493  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  9509492 acagagtgccttgtta-gattttgcgacctt 9509463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 12699335 - 12699106
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  12699335 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 12699236  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||| |||||| ||| ||||||||| ||||| ||||  ||| ||||||||||||||||||||| || |||| |||||||| ||||| |||| ||||||||    
T  12699235 atgaaattgaacctggaaagattgttgaatgaaactcgtgggattctgacctgaactcgccacggcgagcagaggctctcacctcgtgagtgacccagaa 12699136  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    |||||||| ||||||||| ||||||||||||    
T  12699135 acaaagtgacttgttagg-ttttgcgacctt 12699106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 15143654 - 15143884
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgactttt-gagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||| | ||| |||||||||||||||||||||| ||||||  |||||||||| |||||||||||||||||||||||||| ||||| |||||| | |||    
T  15143654 cagagaacttgcgagatttcgtgattttgactttttgagttgtaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttag 15143753  T
Q  113 gatgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccaga 212  Q
     ||||||||||| ||| ||||||| ||||||| ||||||||  ||||||||||| ||||||||  || |||| ||||||||||||||||||| ||| |||    
T  15143754 aatgagattgaacctggaaagattttagaatg-aacttttgtgattctgacctgtactcgccatggcgagcagaggctctcgcctcgcgagtgacctaga 15143852  T
Q  213 aacaaagtgtcttgttaggtttttgcgacctt 244  Q
    |||| |||| ||||||||| ||||||||||||    
T  15143853 aacagagtgccttgttaggattttgcgacctt 15143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 16385876 - 16386094
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  16385876 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 16385975  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  ||||| ||| ||||| ||||||||||||||| || ||||  |||||||||||||||||| ||||||||    
T  16385976 atgagattgaacctg-----------gaattaaacttgtgggattctaacctgaactcgccacggcgagcagtggctctcgcctcgcgagtgacccagaa 16386064  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  16386065 acagagtgacttgtta-gattttgcgacctt 16386094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 27847462 - 27847680
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||    
T  27847462 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttagg 27847561  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  ||||| ||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||| ||||| ||    
T  27847562 atgagattgaacctg-----------gaattaaacttatgggattttgacctgaactcgccacggcaagcagaggctctcgcctcgcgagtgacccaaaa 27847650  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  27847651 acagagtgacttgtta-gattttgcgacctt 27847680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 40443880 - 40443663
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||| |||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  40443880 cagaaagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 40443781  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           |||| |||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  40443780 atgagattgaacctg-----------gaat-taacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 40443693  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||| || || ||||||||||||    
T  40443692 acagagtgacttatt-ggattttgcgacctt 40443663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 28504919 - 28505106
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||     
T  28504919 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 28505018  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||||||||| | ||||||| || ||| |  | ||||||| ||||||||||  || |||| ||||||||||||||||||    
T  28505019 atgagattgaacctgaaaagact-tagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 28505106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 204
Target Start/End: Original strand, 17061593 - 17061767
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||||||||| |||    
T  17061593 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17061692  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
     | ||||| ||||||  ||||||  ||| |||||||||||||||| |  || || | |||||||||||||||||||    
T  17061693 gatagattttagaataaaactttgagaa-tctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagt 17061767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 9751168 - 9751355
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||| |||||||||||||    
T  9751168 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 9751267  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttg-gaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||| ||||| ||| ||||| | ||||||| |||||| | ||||| ||| ||||||||||||  |  |||| ||||||||||||||||||    
T  9751268 atgaggttgaacctggaaagact-tagaatgaaactttggagaatt-tga-ctgaactcgccatggtgagcagaggctctcgcctcgcgag 9751355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 2831924 - 2832110
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||| |||||||||||||    
T  2831924 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 2832023  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||  ||||| | ||||||| |||||| |  | ||||| |||||||| |||  || |||| ||||||||||||||||||    
T  2832024 atgagattgaacctagaaagact-tagaatg-aactttggagaatctga-ctgaactcaccatggcgagcagaggctctcgcctcgcgag 2832110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 18302681 - 18302494
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||   |||| |||||||||||||    
T  18302681 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtagg 18302582  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||||| | ||||||| |||||| |  | ||||| ||||||||||||  || |||| ||||||||||||||||||    
T  18302581 atgagattgaacctggaaagact-tagaatgaaactttggataatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 18302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 39267264 - 39267447
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||  ||||| |||||||||||||    
T  39267264 cagagagcatgcaagattttgtgattttgacttttgagttgaaccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 39267363  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcg 199  Q
    ||||||||||| ||| ||||| | ||||||| |||||| |  | ||||| ||||||||||||  || |||| ||||||||||||||    
T  39267364 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 39267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 29 - 204
Target Start/End: Complemental strand, 44116992 - 44116819
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    ||||||| ||||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||| ||||| |||||||||||| ||||||||||| | |    
T  44116992 atttcgtaattttgactcttgagttgatccttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccg 44116893  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
     ||||||| ||||||| |||||| |||| ||||||||||||||||||  || |||| |||||||||||||||||||    
T  44116892 gaaagatt-tagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 44116819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 15754505 - 15754689
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||     
T  15754505 cagagagcatgcaagatttcgaatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtaga 15754604  T
Q  114 atgagattgaatctgaaaagattgtagaatg-taacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcg 199  Q
    ||||||||||| ||| ||| | | |||||||  ||||||||  | ||||||| ||||| ||||| || |||||||||||||||||||    
T  15754605 atgagattgaacctggaaaaact-tagaatgaaaacttttgagaatctgacc-gaacttgccacggcgagcataggctctcgcctcg 15754689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 34201286 - 34201099
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||     
T  34201286 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttaga 34201187  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||||| | ||||||| || ||| |  | ||||| ||||||||||||  || |||| ||||||| ||||||||||    
T  34201186 atgagattgaacctgtaaagact-tagaatgaaaatttggagaatctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 34201099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 26212488 - 26212299
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||   |||| | |||||||||||    
T  26212488 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtagg 26212389  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||| ||||| ||   |||||||||||||||||||| || || | ||||||||||||||||||| ||||||||    
T  26212388 atgagattgaacctg-----------gaatgaaacttgtgaggttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 26212300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 12756350 - 12756445
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| |||||||||||    
T  12756350 atttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaa 12756445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 44014664 - 44014547
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  44014664 agatttcgtaattttgacttttgagttgatacttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 44014565  T
Q  127 tgaaaagattgtagaatg 144  Q
    || ||||||| |||||||    
T  44014564 tggaaagattttagaatg 44014547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 810760 - 810937
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||| || || || |||||||| |    
T  810760 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacc 810859  T
Q  127 tgaaaagattgtagaatgtaacttttg-gaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    || ||||| | ||||||| || ||||| ||| | | ||||||||||||||  || || | ||||||||||||||||||||    
T  810860 tggaaagaatttagaatg-aatttttgtgaactgt-acctgaactcgccatggcgagtagaggctctcgcctcgcgagta 810937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 11995676 - 11995768
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaaga 106  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  11995676 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 18006131 - 18006052
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaaga 106  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  18006131 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaaga 18006052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 68236 - 68139
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||| ||||||||||| ||||| |||||| || ||  ||||||||||    
T  68236 agatttcgtaattttgacttttgagttgatccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaa 68139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 47832297 - 47832197
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatct 127  Q
    |||||||| |||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||| || ||  | |||||||||||    
T  47832297 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaatct 47832198  T
Q  128 g 128  Q
    |    
T  47832197 g 47832197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 19649103 - 19649170
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||||||||||||||    
T  19649103 cagagagcatgcaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 19649170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 2760613 - 2760543
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||| || |||| |||||| |||||    
T  2760613 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagatta 2760543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 3272273 - 3272203
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||| || |||| |||||| |||||    
T  3272273 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagatta 3272203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 24054969 - 24054883
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||| ||||||||||||| ||  |||||||||||||||||| ||||||||| ||||||||||||||| |||| || ||| ||||||    
T  24054969 cagagtgcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagattaa 24054883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 18154469 - 18154522
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  18154469 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 18154522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 16324495 - 16324399
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||||| |||||||| ||| |||||| ||||  ||| |||||||||| |||||||||||||||| ||||| |||||| || ||  ||||||||||    
T  16324495 gatttcgtaattttgacctttaagttgaaccttgaatgtttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaa 16324399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 10589386 - 10589312
Alignment:
Q  169 ctcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgttaggtttttgcgacctt 244  Q
    |||||||| || |||| ||||||||||||||||||| ||||||||||| |||| ||||||| | ||||||||||||    
T  10589386 ctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctt 10589312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 10508725 - 10508787
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||| ||| ||| ||||||    
T  10508725 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagattaa 10508787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 12187490 - 12187428
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  12187490 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattaa 12187428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 21064780 - 21064890
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| |||||||||| ||||||||||  | |||||| | ||||||||| || |||| ||||||||||||  ||||| ||||| |||| | | |||     
T  21064780 cagagagcttgcaagattttgtgattttgagctgtgagtttaaccttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttaga 21064879  T
Q  114 atgagattgaa 124  Q
    |||||||||||    
T  21064880 atgagattgaa 21064890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 17137706 - 17137767
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  17137706 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 17137767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 44407988 - 44408099
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||| ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  44407988 gcagagagcatgtaagattttgaaatttcgactttttagttgaaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 44408087  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  44408088 gacaagattgaa 44408099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 11880729 - 11880667
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| ||||||    
T  11880729 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgattaa 11880667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 15211903 - 15211865
Alignment:
Q  40 ttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  15211903 ttgacttttgagttgaaccttagatgcttttgagtgcct 15211865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 14430356 - 14430315
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  14430356 attttgacttttgagttaaaccttagatgcttttgagtgcct 14430315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 42205567 - 42205530
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  42205567 attttgacttttgagttgaaccttagatgcttttgagt 42205530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 4993989 - 4993917
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    |||||||| |||||||| ||||||||||||  | |||||| | ||||||||| || |||| ||||||||||||    
T  4993989 cagagagcttgcaagatctcgtgattttgagctgtgagtttaaccttagatgtttatgagggcctgaacatgt 4993917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 8917878 - 8917842
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  8917878 ttttgacttttgagttgaaccttagatgcttttgagt 8917842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 9703743 - 9703703
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  9703743 ttttgacttttgagttgaaccttagatgtttttgagtgcct 9703703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 13462213 - 13462177
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  13462213 ttttgacttttgagttgaaccttagatgcttttgagt 13462177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 15581144 - 15581108
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  15581144 ttttgacttttgagttgaaccttagatgcttttgagt 15581108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 15604926 - 15604962
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  15604926 ttttgacttttgagttgaaccttagatgcttttgagt 15604962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 14953674 - 14953563
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  14953674 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14953575  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  14953574 gacaagattgaa 14953563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 16056684 - 16056613
Alignment:
Q  162 acctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgttaggtt 233  Q
    |||||||||||||| ||| || | ||||||||||||||||||| ||||||  ||| | || |||||||||||    
T  16056684 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgttaggtt 16056613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 22073376 - 22073309
Alignment:
Q  57 ccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||| | |||||||||||||||||||| |||||| |||||  ||||| | ||| |||||||||||    
T  22073376 ccttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaa 22073309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 26420454 - 26420343
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  26420454 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 26420355  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  26420354 gacaagattgaa 26420343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 2279772 - 2279846
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||||  ||||||| |||||||||||||||||||  |||||| ||||| |||||| | |||  ||||||||||    
T  2279772 agttgatatttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaa 2279846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 9389337 - 9389423
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||||||| |||||| |||| |||| ||||||||| ||| || ||| |||| | ||||| |||||| |||||  ||||||||||    
T  9389337 ttttgacttttaagttgaaccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaa 9389423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 2529631 - 2529680
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||| ||||||||| ||||||||||||||| |||| |||||| |||||    
T  2529631 agttgaaccttagatgattttgagtgcctgaatatgtataataatgatta 2529680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 12321385 - 12321446
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| ||||||| | |||||||||||| || |||| || ||| |||||    
T  12321385 ttttgacttttgagttgaaccttagacgtttttgagtgcctaaagatgtttattaaagatta 12321446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 14194766 - 14194729
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatg 65  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  14194766 gatttcgtaattttgacttttgagttgaaccttagatg 14194729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 11044 - 11080
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  11044 ttttgacttttgagttgaaccttagatgcctttgagt 11080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 18712 - 18748
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  18712 ttttgacttttgagttgaaccttagatgcctttgagt 18748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 6801664 - 6801628
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  6801664 ttttgacttttgagttgaaccttagatgcctttgagt 6801628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 9593797 - 9593761
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  9593797 ttttgacttttgagttgaaccttagatgcctttgagt 9593761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 9644760 - 9644724
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  9644760 ttttgacttttgagttgaaccttagatgcctttgagt 9644724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 11313100 - 11313064
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  11313100 ttttgacttttgagttgaaccttagatgcctttgagt 11313064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 11987664 - 11987628
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  11987664 ttttgacttttgagttgaaccttagatgcctttgagt 11987628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 12318579 - 12318543
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| | ||||||||||||||||    
T  12318579 ttttgacttttgagttgaacattagatgcttttgagt 12318543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 13149606 - 13149570
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  13149606 ttttgacttttgagttgaaccttagatgcctttgagt 13149570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 13635123 - 13635159
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  13635123 ttttgacttttgagttgaaccttagatgcctttgagt 13635159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 15728776 - 15728740
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  15728776 ttttgacttttgagttgaaccttagatgcctttgagt 15728740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 16275943 - 16275907
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  16275943 ttttgacttttgagttgaaccttagatgcctttgagt 16275907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 16583686 - 16583650
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  16583686 ttttgacttttgagttgaaccttagatgcctttgagt 16583650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 16724285 - 16724321
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  16724285 ttttgacttttgagttgaaccttagatgcctttgagt 16724321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 17701299 - 17701335
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  17701299 ttttgacttttgagttgaaccttagatgcctttgagt 17701335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 26292847 - 26292811
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  26292847 ttttgacttttgagttgaaccttagatgcctttgagt 26292811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 35152057 - 35152021
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  35152057 ttttgacttttgagttgaaccttagatgcctttgagt 35152021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 35366727 - 35366655
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    |||||||| |||||||||||||| |||| |  | |||||| | |||| |||| ||||||| ||||||||||||    
T  35366727 cagagagcttgcaagatttcgtgtttttaagctgtgagtttaaccttggatgtttttgagggcctgaacatgt 35366655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 163; Significance: 4e-87; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 23660525 - 23660296
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  23660525 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 23660426  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||| ||||||||||||||||||| || |||| |||||||||||||| |||| ||||||||    
T  23660425 atgagattgaacctggaaagattttagaatgaaacttttggaa-tctgacctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccagaa 23660327  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||||||||||| ||||||    
T  23660326 acagagtgccttgttaggtttttgtgacctt 23660296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 27754078 - 27753849
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  27754078 cagatagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtagg 27753979  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||| ||| ||||||||    
T  27753978 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaa 27753879  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  27753878 acagagtgccttgtta-gattttgcgacctt 27753849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 15 - 235
Target Start/End: Original strand, 22730852 - 22731072
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  22730852 agagagcatgcaatatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 22730951  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||| |  |||| ||||||||||||| ||||| |||||||||    
T  22730952 tgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggggagcaaaggctctcgcctcacgagtcacccagaaa 22731051  T
Q  215 caaagtgtcttgttaggtttt 235  Q
    || |||| |||||||||||||    
T  22731052 cagagtgccttgttaggtttt 22731072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 298433 - 298661
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  298433 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatatagg 298532  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||||| ||| ||||||||||||||||||||| || || | ||||||||||||||||||| ||||||||    
T  298533 atgagattgaacctggaaagatt-tagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 298631  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  298632 acagagtgacttgtta-gattttgcgacctt 298661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 22737799 - 22738027
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  22737799 agagatcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtagga 22737898  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||||| ||  ||||||||||||||| ||||| ||| ||||||| ||||||||||||| || |||| ||||||||||||||||||| ||| |||||    
T  22737899 tgagattgaacctagaaagattgtagaatgaaacttgtgggattctgaactgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaa 22737998  T
Q  215 caaagtgtcttgttaggtttttgcgacctt 244  Q
    || |||| ||||||||| ||||||||||||    
T  22737999 cagagtgccttgttagg-ttttgcgacctt 22738027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 22337617 - 22337389
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||    
T  22337617 agagagcatgcaagatttcgtgattctgacttttgagttgatccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtagga 22337518  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||||| ||| ||||||| ||||||| ||||||| || |||||||||||| ||||||| || || | ||||||||||||||||||| |||||||||    
T  22337517 tgagattgaacctggaaagatt-tagaatgaaactttttgagttctgacctgaattcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 22337419  T
Q  215 caaagtgtcttgttaggtttttgcgacctt 244  Q
    || || ||||||||||||||||| ||||||    
T  22337418 cagagagtcttgttaggtttttgtgacctt 22337389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 23076940 - 23076716
Alignment:
Q  17 agagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatg 116  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  23076940 agagcatgcaagatttcgtgattttgactattaagttgatccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatg 23076841  T
Q  117 agattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaaca 216  Q
    |||||| | ||| ||||||| ||||||| ||| ||||||||||||||||||||||||||| || || | ||||||||||||||||||| |||||||||||    
T  23076840 agattggacctggaaagatt-tagaatgaaac-tttggaattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaaca 23076743  T
Q  217 aagtgtcttgttaggtttttgcgacctt 244  Q
     |||| ||||||||| ||||||||||||    
T  23076742 gagtgccttgttagg-ttttgcgacctt 23076716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 29 - 244
Target Start/End: Original strand, 32451562 - 32451776
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||  ||    
T  32451562 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatg 32451661  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgtt 228  Q
     ||||||||||||||| ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||||| |||| ||||||    
T  32451662 gaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt 32451761  T
Q  229 aggtttttgcgacctt 244  Q
    | | ||||||||||||    
T  32451762 a-gattttgcgacctt 32451776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 20309597 - 20309387
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| ||||| |||||||||||||    
T  20309597 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtagg 20309498  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  ||||| ||| ||||||||||||||||||||| |  |||| ||||||||||||||||||| ||||||||    
T  20309497 atgagattgaacctg-----------gaattaaacttgtgggattctgacctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaa 20309409  T
Q  214 acaaagtgtcttgttaggtttt 235  Q
    |||||||| |||||||| ||||    
T  20309408 acaaagtgacttgttagatttt 20309387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 23286352 - 23286135
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  23286352 agagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagga 23286253  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    ||||||||||  ||           ||||| || || ||  ||| ||||||||||||||||| || |||| ||||||||||||||||||| ||| |||||    
T  23286252 tgagattgaacatg-----------gaatgaaaattgtgagattatgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaa 23286164  T
Q  215 caaagtgtcttgttaggtttttgcgacctt 244  Q
    || |||| ||||||| | ||||||||||||    
T  23286163 cagagtgacttgtta-gattttgcgacctt 23286135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 23654028 - 23654138
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  23654028 cagagagcatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtagg 23654127  T
Q  114 atgagattgaa 124  Q
    |||||||||||    
T  23654128 atgagattgaa 23654138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 230
Target Start/End: Original strand, 37745 - 37950
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||| ||||||||| |||||||  ||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||    
T  37745 cagaaagcatgcaaaatttcgtatttttgacttttgagtggaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtagg 37844  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  ||||| ||  ||||| ||||||||||||||| || |||| ||||||||||||||||||  ||||||||    
T  37845 atgagattgaacctg-----------gaattaaacttgtgagattctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaa 37933  T
Q  214 acaaagtgtcttgttag 230  Q
    ||| |||| ||||||||    
T  37934 acatagtgacttgttag 37950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 28291920 - 28292027
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||     
T  28291920 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtaga 28292019  T
Q  114 atgagatt 121  Q
    ||||||||    
T  28292020 atgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 203
Target Start/End: Original strand, 23071614 - 23071768
Alignment:
Q  47 ttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattgtagaatgta 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||| | ||||||| |    
T  23071614 ttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaa 23071712  T
Q  147 acttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    | ||| |  | ||||||| ||||||||||  || |||| ||||||||||||||||||    
T  23071713 aatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 23071768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 22133848 - 22134020
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  22133848 agatttcgtacttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 22133947  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcga 202  Q
    |   |||| | ||||||| || |||  |||  |||| ||||||||||||  || |||| |||||||||||||||||    
T  22133948 taggaagactttagaatg-aattttgtgaa--ctgaactgaactcgccatggcgagcagaggctctcgcctcgcga 22134020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 25176331 - 25176254
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaag 105  Q
    |||||||| |||||||| |||||||||| ||||||||| ||||||||||||||||||||||||| | ||||| |||||    
T  25176331 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaag 25176254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 23100849 - 23100916
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||| ||||||||||    
T  23100849 cagagagcatgcaagatttcgtaattttgacttttgagttgaacctcagatgtttttaagtgcctgaa 23100916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 28406436 - 28406353
Alignment:
Q  60 tagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattgtagaat 143  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||| || || ||||||||||| ||| ||||||| ||||||    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaat 28406353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 22740579 - 22740665
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||| ||||||  ||  ||| |||||||||||||| ||||||||| ||||||||||||||| |||| || ||| ||||||    
T  22740579 cagagagcatgtaagattatgtagtttggacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagattaa 22740665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 24658116 - 24658054
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  24658116 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaatgattaa 24658054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 25963359 - 25963421
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  25963359 attttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 25963421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 22758334 - 22758419
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||| ||||||  ||  ||| |||||||||||||| ||||||||| ||||||||||||||| |||| || ||| |||||    
T  22758334 cagagagcatgtaagattatgtagtttggacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 22758419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 22811553 - 22811638
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||  | |||| || ||||||||||||||||||| |||||| ||||||||||||||| || |||| || ||| |||||    
T  22811553 cagagagcatgttaaattttgtaattttgacttttgagttgaaccttaggtgcttttgagtgccttaagatgtttattaaagatta 22811638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 21917958 - 21918020
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||| | |||||||||||||||||||||| || |||| || ||| |||||    
T  21917958 attttgacttttgagtttaaccttagatgcttttgagtgccttaagatgtttattaaagatta 21918020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 37525141 - 37525079
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||| | |||||||||||||||||||||| || |||| || ||| |||||    
T  37525141 attttgacttttgagttaaaccttagatgcttttgagtgccttaagatgtttattaaagatta 37525079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 22798769 - 22798830
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| |||||    
T  22798769 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagatta 22798830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 24654996 - 24655032
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||| ||||||||||||||||||||||    
T  24654996 gacttttgagttgaaccttagatgcttttgagtgcct 24655032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 27263703 - 27263667
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  27263703 ttttgacttttgagttgaaccttagatgcttttgagt 27263667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 40428936 - 40428892
Alignment:
Q  30 tttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||    
T  40428936 tttcgtgttttggacttttgagttgaaccttagatgcttttgagt 40428892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 45677798 - 45677838
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  45677798 ttttgacttttgagttgaaccttagatgtttttgagtgcct 45677838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 24503587 - 24503476
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  24503587 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 24503488  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  24503487 gacaagattgaa 24503476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 44369918 - 44369985
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||||||   |||||||||||||| |  | |||||||| ||||||||| |||||||||||||||    
T  44369918 cagagagcatgttggatttcgtgattttaagctgtgagttgaaccttagatgtttttgagtgcctgaa 44369985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 23038518 - 23038468
Alignment:
Q  31 ttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||| ||||||||||||||| ||| ||||||||| | |||||||||||||    
T  23038518 ttcgtaattttgacttttgagatgaaccttagatgttgttgagtgcctgaa 23038468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 211
Target Start/End: Original strand, 23708252 - 23708432
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    |||||||  |||||||  ||||||||||| ||||||| ||||||||| |||||||| | || ||| ||||| |||||   ||||  |||||||||||| |    
T  23708252 atttcgtagttttgacccttgagttgatctttagatgtttttgagtgtctgaacatatgtattaatgattaggaaagttcgtagattgagattgaatcgg 23708351  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccag 211  Q
    || || ||  ||||||  | |||||| | |   |||||||||||||| ||| || | |||||||||||| |||||| ||||||    
T  23708352 aatag-tttaagaatg-gatttttgggagttacacctgaactcgccatagcgagtagaggctctcgccttgcgagttacccag 23708432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 40621851 - 40621888
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtg 75  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  40621851 ttttgacttttgagttgaaccttagatgtttttgagtg 40621888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 19928156 - 19928192
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  19928156 ttttgacttttgagttgaaccttagatgcctttgagt 19928192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 22460844 - 22460880
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  22460844 ttttgacttttgagttgaaccttagatgcctttgagt 22460880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 23187527 - 23187491
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  23187527 ttttgacttttgagttgaaccttagatgcctttgagt 23187491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 23598790 - 23598754
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  23598790 ttttgacttttgagttgaaccttagatgcctttgagt 23598754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 24175259 - 24175227
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||| ||||||||||||||||||    
T  24175259 gacttttgagttgaaccttagatgcttttgagt 24175227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 24674052 - 24674012
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| |||||||||| ||| |||||||    
T  24674052 ttttgacttttgagttgaaccttagatgcctttaagtgcct 24674012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 24870339 - 24870307
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||| ||||||||||||||||||    
T  24870339 gacttttgagttgaaccttagatgcttttgagt 24870307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 26125655 - 26125619
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  26125655 ttttgacttttgagttgaaccttagatgcctttgagt 26125619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 41667401 - 41667365
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  41667401 ttttgacttttgagttgaaccttagatgcctttgagt 41667365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 162; Significance: 1e-86; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 23406884 - 23406663
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  23406884 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 23406785  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||| | ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||| || || | ||||||||||||||||||| ||||||||    
T  23406784 atgagattggacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 23406685  T
Q  214 acaaagtgtcttgttaggtttt 235  Q
    ||| |||| |||||||||||||    
T  23406684 acagagtgccttgttaggtttt 23406663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 18818028 - 18818256
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  18818028 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagg 18818127  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| |||||||||| |||| |||||||||  |||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  18818128 atgagattgaacctggaaagattgtaaaatgaaacttttgg-tttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 18818226  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||||||||||||| ||||||||||||    
T  18818227 acagagtgtcttgttagg-ttttgcgacctt 18818256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 22627238 - 22627009
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  22627238 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22627139  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||  ||||||||||||||| ||| ||||||| ||||||| ||||| ||||| || |||| ||||||||||||||||||| | | ||||    
T  22627138 atgagattgaacctcgaaagattgtagaatg-aacctttggaaatctgacccgaacttgccacggcgagcagaggctctcgcctcgcgagtgatctagaa 22627040  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||||||||||||||||||||||||||    
T  22627039 acagagtgtcttgttaggtttttgcgacctt 22627009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 18878855 - 18879076
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  18878855 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 18878954  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||   | |||| ||||||||||||||||||| ||||||||    
T  18878955 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccaagacgagcagaggctctcgcctcgcgagtgacccagaa 18879054  T
Q  214 acaaagtgtcttgttaggtttt 235  Q
    ||| |||| |||||||| ||||    
T  18879055 acagagtgccttgttagatttt 18879076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 15 - 238
Target Start/End: Complemental strand, 6759759 - 6759536
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| |    
T  6759759 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaa 6759660  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    ||||||||||  || ||| ||| ||||||| ||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||| |||||||||    
T  6759659 tgagattgaacttggaaatattttagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 6759560  T
Q  215 caaagtgtcttgttaggtttttgc 238  Q
    || |||||||||||||| ||||||    
T  6759559 cagagtgtcttgttaggattttgc 6759536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 20536711 - 20536482
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  20536711 cagagagcatgcaagattttgtgattttgactttcgagttgaaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtagg 20536612  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||| || || | ||||||||||||||||||| ||||||||    
T  20536611 atgagattgaacctggaaagattgtagaatgaaacttatgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 20536512  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||| ||||| ||||||||||||    
T  20536511 acagagtgacttattagg-ttttgcgacctt 20536482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 28648663 - 28648891
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  28648663 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagga 28648762  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    ||||||||||  || ||||||| ||||||| ||| ||| ||||| ||||||||||||||||| || |||| |||||||||||| |||  | |||||||||    
T  28648763 tgagattgaacatggaaagatt-tagaatgaaaccttttgaattttgacctgaactcgccacggcgagcagaggctctcgccttgcgcatgacccagaaa 28648861  T
Q  215 caaagtgtcttgttaggtttttgcgacctt 244  Q
    || |||| ||||||||| ||||||||||||    
T  28648862 cagagtgccttgttaggattttgcgacctt 28648891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 16091959 - 16092184
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||     
T  16091959 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtaga 16092058  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||||||| || ||||||||||| || ||   ||||||||||||||||||||||||||||||| || |||| ||||||||||||| ||||| ||||||||    
T  16092059 atgagattaaacctgaaaagatt-taaaaaaaaacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcccgagtgacccagaa 16092157  T
Q  214 acaaagtgtcttgttaggtttttgcga 240  Q
    ||| |||| | ||||||| ||||||||    
T  16092158 acagagtgccctgttaggattttgcga 16092184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 21923546 - 21923775
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||    
T  21923546 cagagagcatgtgagattttgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtagg 21923645  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctga-cctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccaga 212  Q
    ||||||||||| ||||||||||| ||||||| ||||||| | ||||||| |||||||||||||| |  |||| ||||||||||||||||||| |||||||    
T  21923646 atgagattgaacctgaaaagatt-tagaatgaaactttttggattctgaccctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaga 21923744  T
Q  213 aacaaagtgtcttgttaggtttttgcgacctt 244  Q
    |||| |||| ||||||||| ||||||||||||    
T  21923745 aacagagtgccttgttagg-ttttgcgacctt 21923775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 23649055 - 23648827
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  23649055 agagagcatgcaagatttcatgtttttgacttttgagttgatccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtagga 23648956  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaac-ttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||||||| | ||||||||| | ||||||| ||| |||||||||||||||| ||||||||||  || | || |||||||||||||| |||||||||||||    
T  23648955 tgagattggacctgaaaagact-tagaatgaaacattttggaattctgacc-gaactcgccatggcgatcagaggctctcgcctcgtgagtaacccagaa 23648858  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| |||||||||||| |||||||||    
T  23648857 acagagtgacttgttaggtttatgcgacctt 23648827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 14 - 204
Target Start/End: Complemental strand, 41598687 - 41598498
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  41598687 cagagagcttgcaggattccgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaga 41598588  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
    ||||||||||| ||| ||||||| ||||||| |||||| |||| ||||||||||||||||||  || |||| |||||||||||||||||||    
T  41598587 atgagattgaacctggaaagattttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 41598498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 7373237 - 7373090
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| |||    
T  7373237 atttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctg 7373138  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccac 176  Q
     ||||||||||||||| ||||| || ||||||||||||||||||||||    
T  7373137 gaaagattgtagaatgaaacttgtgaaattctgacctgaactcgccac 7373090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 22875568 - 22875343
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||| | || ||||||| |||||| ||||| |||||| |||||     
T  22875568 cagagagcttgcaagatttcgtgattttgacctttgagttaatccttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtaga 22875469  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    | ||| ||||| ||| ||||||| ||||||| |||||| |||| ||||||||||||||||||   | |||| ||||||||||||||||||| ||||||||    
T  22875468 acgaggttgaacctggaaagattttagaatgaaactttgggaa-tctgacctgaactcgccatgacgagcagaggctctcgcctcgcgagtgacccagaa 22875370  T
Q  214 acaaagtgtcttgttaggtttttgcga 240  Q
    ||| |||| |||||||||  |||||||    
T  22875369 acagagtgacttgttagggctttgcga 22875343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 5865895 - 5866082
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  5865895 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 5865994  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||||||||| | ||||||| || ||| |  | ||||||| ||||||||||  || |||| ||||||||||||||||||    
T  5865995 atgagattgaacctgaaaagact-tagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 5866082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 21918628 - 21918847
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||    
T  21918628 cagacagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtagg 21918727  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    | ||||||||| ||| |          |||| ||||| ||| ||||||||||||||||||||  || |||| ||||||||||||||||||| ||| ||||    
T  21918728 aagagattgaacctgga----------aatgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaa 21918817  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  21918818 acagagtgacttgtta-gattttgcgacctt 21918847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 17141416 - 17141229
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| ||  |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  17141416 cagagagcatgcaagattttgtattttttacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 17141317  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||||||||| | ||||||| || ||| |  | || |||| ||||||||||  || |||| ||||||||||||||||||    
T  17141316 atgagattgaacctgaaaagact-tagaatgaaaatttagagaatcagacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 17141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 16199276 - 16199493
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||| ||||| |||||||||||||    
T  16199276 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtagg 16199375  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |           |||||| |||  | ||| |||||||||||||||||||||||| |||| | ||||||||||||||||| ||||| ||    
T  16199376 atgagattgaacc-----------tagaat-taaactgtgggattctgacctgaactcgccacagcgagcagacgctctcgcctcgcgagtgacccaaaa 16199463  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||| || || ||||||||||||    
T  16199464 acagagtgacttatt-ggattttgcgacctt 16199493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 31971747 - 31971529
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||    
T  31971747 cagagagcatgcaagatttcgtgtttttgacttttgagttgaaccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtagg 31971648  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  ||||| ||  ||||||||||||||||||| | || |||| ||||| || |||||||||  ||||||||    
T  31971647 atgagattgaacctg-----------gaattaaacttgtgagattctgacctgaactcgccccggcgagcagaggctgtcacctcgcgagcgacccagaa 31971559  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    | | |||| ||||||| | ||||||||||||    
T  31971558 atagagtgacttgtta-gattttgcgacctt 31971529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 21491495 - 21491385
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  21491495 cagagagcatgcaagattttgtaattttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 21491396  T
Q  114 atgagattgaa 124  Q
    |||||||||||    
T  21491395 atgagattgaa 21491385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 45130649 - 45130759
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  45130649 cagagaccatgcaagatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 45130748  T
Q  114 atgagattgaa 124  Q
    |||||||||||    
T  45130749 atgagattgaa 45130759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 21249884 - 21249697
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||||||  |||||||||||||| ||||| |||||||||||||    
T  21249884 cagagagcatgcaagatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtagg 21249785  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    |||||| |||| ||| ||||| | | ||||| || ||| |  | ||||||| ||||||||||  || |||| ||||||||||||||||||    
T  21249784 atgagactgaacctggaaagact-tggaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 21249697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 21255722 - 21255535
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||||||  |||||||||||||| ||||| |||||||||||||    
T  21255722 cagagagcatgcaagatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtagg 21255623  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||||| | | ||||| || ||| |  | ||||||| ||||||||||  || ||||  |||||||||||||||||    
T  21255622 atgagattgaacctggaaagact-tggaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagcggctctcgcctcgcgag 21255535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 19801045 - 19801137
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaaga 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| ||||||    
T  19801045 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaaga 19801137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 227
Target Start/End: Original strand, 25362793 - 25362971
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattg 137  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||| |||             
T  25362793 ttttgacttttgagttgaaccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctg--------- 25362883  T
Q  138 tagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgt 227  Q
      ||||| ||||| ||| ||||||||||||||||||||  || |||| |||||||||||||| |||| |||| |||||| |||| |||||    
T  25362884 --gaatgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgagagtgacccggaaacagagtgccttgt 25362971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 21674195 - 21674078
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| |||||||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  21674195 agatttcgtaattttgacttttgagttgatccttggacgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 21674096  T
Q  127 tgaaaagattgtagaatg 144  Q
    || ||||||| |||||||    
T  21674095 tggaaagattttagaatg 21674078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 26355329 - 26355446
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| || ||| || ||  |||||||||| |    
T  26355329 agatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacc 26355428  T
Q  127 tgaaaagattgtagaatg 144  Q
    || ||||| | |||||||    
T  26355429 tggaaagactttagaatg 26355446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 21389071 - 21389156
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| |||  |||||| |||||    
T  21389071 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaagatgcttaataaagatta 21389156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 38854883 - 38854961
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaaga 106  Q
    |||||||| |||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  38854883 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 38854961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 6520857 - 6520779
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaaga 106  Q
    |||||||| |||||||| ||| |||||| ||||||||| ||||||||| |||||||||||||||||  |||| ||||||    
T  6520857 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaaga 6520779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 16409889 - 16409959
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  16409889 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 16409959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 16860971 - 16861041
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  16860971 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 16861041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 20856059 - 20856108
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  20856059 atttcgtgattttgaattttgagttgaaccttagatgcttttgagtgcct 20856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 23760481 - 23760548
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaa 104  Q
    |||||||||||||||||||||| |  ||| |||||||| |||||||||||||||||| ||||| ||||    
T  23760481 attttgacttttgagttgatccctgaatgtttttgagttcctgaacatgtctaataatgattaggaaa 23760548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 15602659 - 15602721
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  15602659 attttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 15602721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 15611111 - 15611173
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  15611111 attttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 15611173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 22010322 - 22010383
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||| |||||| |||||||||||||||||||||| || |||| |||||| |||||    
T  22010322 ttttgactttttagttgaaccttagatgcttttgagtgccttaagatgtttaataaagatta 22010383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 377754 - 377714
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  377754 ttttgacttttgagttgaaccttagatgcttttgagtgcct 377714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 20465682 - 20465722
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  20465682 ttttgacttttgagttgaaccttagatgcttttgagtgcct 20465722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 21395630 - 21395686
Alignment:
Q  43 acttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||| ||||||||||||||||||||||||| |||  |||||| |||||    
T  21395630 acttttgagttgaaccttagatgcttttgagtgcctgaagatgcttaataaagatta 21395686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 21790123 - 21790179
Alignment:
Q  43 acttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||| ||||||||||||||||||||||||| |||  |||||| |||||    
T  21790123 acttttgagttgaaccttagatgcttttgagtgcctgaagatgcttaataaagatta 21790179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 16411911 - 16411998
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||||||||||||||| ||||| ||| |||||||||||| || |||| || ||| ||||||   | |||||||||| ||||||||    
T  16411911 attttgacttttgagttgaaccttaaatgtttttgagtgccttaagatgtgtattaaagattaaatgataatgtaggatcagattgaa 16411998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 17353580 - 17353642
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| ||||||||| |||||||| |||||| ||| ||| ||| ||||||    
T  17353580 ttttgacttttgagttgaaccttagatgtttttgagtccctgaagatgcctattaaagattaa 17353642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 19899571 - 19899509
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| ||||||    
T  19899571 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgattaa 19899509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 21414857 - 21414955
Alignment:
Q  26 aagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||||||  ||||| |||||| ||| || ||||||||| ||||||||||||||| |||   | ||| ||||| |||||| ||||| |||||||||||    
T  21414857 aagatttcggaatttttactttttagtggaaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaa 21414955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 20499139 - 20499078
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||  ||||||||| | ||||||| |||||||||||||||||||| |||||| |||||    
T  20499139 ttttgacccttgagttgaactttagatgattttgagtgcctgaacatgtataataatgatta 20499078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 30642934 - 30642995
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| |||||    
T  30642934 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagatta 30642995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 17926355 - 17926411
Alignment:
Q  43 acttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  17926355 acttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 17926411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 18619930 - 18619894
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  18619930 ttttgacttttgagttgaaccttagatgcttttgagt 18619894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 22029009 - 22028973
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  22029009 ttttgacttttgagttgaaccttagatgcttttgagt 22028973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 39094587 - 39094631
Alignment:
Q  30 tttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||    
T  39094587 tttcgtgttttggacttttgagttgaaccttagatgcttttgagt 39094631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 19259244 - 19259306
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||| || |||| || ||| ||||||    
T  19259244 attttgacttttgagttgaaccttagatgc-tttgagtgcctaaagatgtttattaaagattaa 19259306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 20527926 - 20527815
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  20527926 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 20527827  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  20527826 gacaagattgaa 20527815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 16185204 - 16185142
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| || |||||| |||||||||||| || |||| || ||| ||||||    
T  16185204 ttttgacttttgagttgaaccatagatgtttttgagtgcctaaagatgtttattaaagattaa 16185142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 19976921 - 19976859
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||| ||||||||||||| ||||||||| |||||||||||| || |||| || ||| ||||||    
T  19976921 tttttacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgattaa 19976859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 19983569 - 19983507
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||| ||||||||||||| ||||||||| |||||||||||| || |||| || ||| ||||||    
T  19983569 tttttacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgattaa 19983507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 39834311 - 39834225
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||| ||| ||| || ||||||||| |||||||||||| ||| ||| | |||| ||||| |||||| |||||  ||||||||||    
T  39834311 ttttgacctttaagtcgaaccttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaa 39834225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 13507663 - 13507712
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||| ||||||||| ||||||||||||||| |||| |||||| |||||    
T  13507663 agttgaaccttagatgattttgagtgcctgaatatgtataataatgatta 13507712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 13597195 - 13597244
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||| ||||||||| ||||||||||||||| |||| |||||| |||||    
T  13597195 agttgaaccttagatgattttgagtgcctgaatatgtataataatgatta 13597244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 21161758 - 21161819
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| ||||||| | |||||||||||| || |||| || ||| |||||    
T  21161758 ttttgacttttgagttgaaccttagaagtttttgagtgcctaaagatgtttattaaagatta 21161819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 21168364 - 21168425
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| ||||||| | |||||||||||| || |||| || ||| |||||    
T  21168364 ttttgacttttgagttgaaccttagaagtttttgagtgcctaaagatgtttattaaagatta 21168425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 10829072 - 10829144
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    |||||||| |||||||||||||||||||||  | |||||| | || | |||| || |||| ||||||||||||    
T  10829072 cagagagcttgcaagatttcgtgattttgagctgtgagtttaaccctggatgtttatgagagcctgaacatgt 10829144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 15532340 - 15532304
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  15532340 ttttgacttttgagttgaaccttagatgcctttgagt 15532304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 15538900 - 15538864
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  15538900 ttttgacttttgagttgaaccttagatgcctttgagt 15538864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 17266757 - 17266797
Alignment:
Q  163 cctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||||| |||||| | ||||||||||||||||||    
T  17266757 cctgaactcgccatagcaagtagaggctctcgcctcgcgag 17266797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 22057800 - 22057768
Alignment:
Q  38 ttttgacttttgagttgatccttagatgctttt 70  Q
    |||||||||||||||||| ||||||||||||||    
T  22057800 ttttgacttttgagttgaaccttagatgctttt 22057768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 22113382 - 22113418
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  22113382 ttttgacttttgagttgaaccttagatgcctttgagt 22113418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 22134885 - 22134921
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  22134885 ttttgacttttgagttgaaccttagatgcctttgagt 22134921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 22166035 - 22166071
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  22166035 ttttgacttttgagttgaaccttagatgcctttgagt 22166071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 23252416 - 23252452
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  23252416 ttttgacttttgagttgaaccttagatgcctttgagt 23252452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 23834625 - 23834589
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  23834625 ttttgacttttgagttgaaccttagatgcctttgagt 23834589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 24433891 - 24433927
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  24433891 ttttgacttttgagttgaaccttagatgcctttgagt 24433927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 24756221 - 24756157
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||| | ||||  ||  |||| ||||||||||||| ||||||||| ||||||||||||    
T  24756221 cagagagcatgtaggattctgtattttttacttttgagttgaaccttagatgtttttgagtgcct 24756157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 30308408 - 30308444
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  30308408 ttttgatttttgagttgaaccttagatgcttttgagt 30308444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 32599130 - 32599094
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  32599130 ttttgacttttgagttgaaccttagatgcctttgagt 32599094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 32605662 - 32605626
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  32605662 ttttgacttttgagttgaaccttagatgcctttgagt 32605626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 158; Significance: 3e-84; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 25684 - 25912
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  25684 agagagcttgcaagatttcatgtttttgacttttgagttgatccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 25783  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||||| ||||||||||||||||||| || |||||||| ||||||||||||||||||| || |||| ||||||||||||||||||| |||||||||    
T  25784 tgagattgaacctgaaaagattgtagaatg-aatttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 25882  T
Q  215 caaagtgtcttgttaggtttttgcgacctt 244  Q
    || |||| ||||||||| ||||||||||||    
T  25883 cagagtgccttgttaggattttgcgacctt 25912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 33112 - 33338
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| |||||||||||||    
T  33112 cagagagcttgcaagatttcgtgattttcacttttgagttgatccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtagg 33211  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||| ||| ||||||||||||||| || |||| |||||||||||||||| || ||||||||    
T  33212 atgagattgaacctggaaagattttagaatgaaacttttggaagtcttacctgaactcgccacggcgagcaaaggctctcgcctcgcgtgtgacccagaa 33311  T
Q  214 acaaagtgtcttgttaggtttttgcga 240  Q
    ||| |||| ||||| ||| ||||||||    
T  33312 acagagtgccttgtcaggattttgcga 33338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 8154 - 8379
Alignment:
Q  17 agagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  8154 agagcatgcaagatttcgtgattttgacttttgagttgatcctt-gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 8252  T
Q  117 agattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaaca 216  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||| ||| |||||||||| |  || | ||||||||||||||||||| |||||||||||    
T  8253 agattgaacctggaaagattgtagaatgaaacttttggaattctggcctaaactcgccacggtgagtagaggctctcgcctcgcgagtgacccagaaaca 8352  T
Q  217 aagtgtcttgttaggtttttgcgacctt 244  Q
     |||||||||||||| ||||||||||||    
T  8353 gagtgtcttgttagg-ttttgcgacctt 8379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 7799200 - 7798971
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||| || | ||||||||    
T  7799200 cagagagcatgcaagatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtagg 7799101  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| |||| |||||||||| ||||| | | ||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  7799100 atgagattgaacctggaaagtttgtagaatgaaacttgtagtattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 7799001  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    |||||||||||||||||| ||||||||||||    
T  7799000 acaaagtgtcttgttagg-ttttgcgacctt 7798971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 14039151 - 14038926
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||| |    
T  14039151 agagagcttgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaa 14039052  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||||| ||  ||||||| ||||||| ||||||||||| ||||||| ||||||||||| || |||| ||||||||||||||||||| |||||||||    
T  14039051 tgagattgaacctagaaagattttagaatgaaacttttggaaatctgaccagaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 14038952  T
Q  215 caaagtgtcttgttaggtttttgcga 240  Q
    || |||| ||||||||| ||||||||    
T  14038951 cagagtgccttgttaggattttgcga 14038926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 15091400 - 15091174
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||  ||||| ||||||||||||     
T  15091400 cagagagcttgcaagatttcgtgattttgacttttgagttgatctttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtaga 15091301  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| || |||| ||||||| ||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  15091300 atgagattgaacctggaaggattttagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 15091201  T
Q  214 acaaagtgtcttgttaggtttttgcga 240  Q
    ||| |||| ||||||||| ||||||||    
T  15091200 acagagtgccttgttaggattttgcga 15091174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 22636937 - 22636708
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||    
T  22636937 cagagagcatgcaagattttgtgattttgacttctgagttgatccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtagg 22636838  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||| ||||||||||| ||||| ||| |||||||| ||| |||||||| || |||| ||||||||||||| ||||| ||||||||    
T  22636837 atgagattgaacctggaaaaattgtagaatgaaacttgtgggattctgacttgacctcgccacggcgagcagaggctctcgcctcacgagtgacccagaa 22636738  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||||||||||||| ||||||||||||    
T  22636737 acagagtgtcttgttagg-ttttgcgacctt 22636708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 44053332 - 44053103
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||||||||    
T  44053332 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtagg 44053233  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||| ||| ||||| ||| ||||||||||||||||||||| || |||| || |||||||||||||||| ||||||||    
T  44053232 atgagattgaacctgtaaagattataggatgaaacttgtgggattctgacctgaactcgccacggcgagcagagactctcgcctcgcgagtgacccagaa 44053133  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  44053132 acagagtgccttgtta-gattttgcgacctt 44053103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 16377140 - 16377369
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| |||| ||||||||    
T  16377140 cagatagcttgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtagg 16377239  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| || ||| |||||||| ||||||||| | ||||||||||||||||||| || |||| ||||||||||||| ||||| ||||||||    
T  16377240 atgagattgaacctggaatgatcgtagaatg-aacttttgggaatctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaa 16377338  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||||| |||||| |||||    
T  16377339 acatagtgccttgttaggattttgctacctt 16377369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 211
Target Start/End: Original strand, 44928542 - 44928737
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||| ||||| |||||||||||| |    
T  44928542 agagagcttgcaagattccgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaa 44928641  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccag 211  Q
    |||||||||| ||| ||||||| ||||||| |||||| |||| ||||||| ||||||||||  || |||| ||||||||||||||||||| ||||||    
T  44928642 tgagattgaacctggaaagattttagaatgaaactttgggaa-tctgaccagaactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 44928737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 7089366 - 7089151
Alignment:
Q  17 agagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatg 116  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  7089366 agagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 7089267  T
Q  117 agattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaaca 216  Q
    |||||||| |||           ||||| ||||| ||| ||||||||||||||||||||  || |||| ||||||||||||||||||| |||| ||||||    
T  7089266 agattgaacctg-----------gaatgaaacttatgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaaca 7089178  T
Q  217 aagtgtcttgttaggtttttgcgacctt 244  Q
     |||||||||||| | ||||||||||||    
T  7089177 gagtgtcttgtta-gattttgcgacctt 7089151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 12903248 - 12903031
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  12903248 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtagg 12903150  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||| ||||| ||| ||||||||||||||||||||| || || | |||||| |||||||||||| ||||||||    
T  12903149 atgagattgaacctg-----------gaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctcccgcctcgcgagtgacccagaa 12903061  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  12903060 acagagtgccttgtta-gattttgcgacctt 12903031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 3097135 - 3096917
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||| | ||||||||||||||||| | ||||||||| ||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  3097135 cagagagcatgcaagatttcataattttgacttttgagttaaaccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 3097036  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||| ||||| ||| ||||||||||||||||||||  || |||| ||||||||||||||||||| ||||||||    
T  3097035 atgagattgaacctg-----------gaatgaaacttgtgggattctgacctgaactcgccaaggcgagcagaggctctcgcctcgcgagtgacccagaa 3096947  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  3096946 acagagtgacttgtta-gattttgcgacctt 3096917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 24029244 - 24029057
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||  ||||| |||||||||||||    
T  24029244 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtagg 24029145  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||||| | ||||||| |||||| |  | ||||| ||||||||||||  || |||| ||||||||||||||||||    
T  24029144 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24029057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 16239610 - 16239769
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaag-aatgtag 112  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  16239610 cagagagcatgcaagatttcgtaattttgacttttgagttgctccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtag 16239709  T
Q  113 gatgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgcc 174  Q
     ||||||||||| ||| ||||||| ||||||| ||||| ||| ||||| |||||||||||||    
T  16239710 aatgagattgaacctggaaagatt-tagaatgaaacttgtgg-attctaacctgaactcgcc 16239769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 204
Target Start/End: Complemental strand, 44102697 - 44102524
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||| | |||||||||||||||||||||| |||    
T  44102697 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgagcatgtttaataatgattatg-aagaatgtaggatgagattgaacctg 44102599  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
     | ||||| ||||||  ||||||  ||| ||||||||||||||||||  || |||| |||||||||||||||||||    
T  44102598 gatagattttagaataaaactttgagaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 44102524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 6190921 - 6190783
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||| |||    
T  6190921 atttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 6190822  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctga 167  Q
     ||||||||||||||| ||||| ||| ||| ||||||||    
T  6190821 gaaagattgtagaatgaaacttgtgggattttgacctga 6190783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 13812427 - 13812614
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||  ||||| |||| ||||||||    
T  13812427 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtagg 13812526  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||||| | ||||||| |||||| |  | ||||| || |||||||||  || |||| ||||||||||||||||||    
T  13812527 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctaaactcgccatggcgagcagaggctctcgcctcgcgag 13812614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 20156908 - 20157027
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||  ||||| |||||||||||||    
T  20156908 cagagagcatgcaagatttcgtgattttgacttttgagttaatccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 20157007  T
Q  114 atgagattgaatctgaaaag 133  Q
    ||||||||||| ||| ||||    
T  20157008 atgagattgaacctggaaag 20157027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 15552316 - 15552129
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  15552316 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 15552217  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||| | ||| ||||| | ||||||  || ||| |  | ||||||| ||||||||||| || |||| |||||| |||||||||||    
T  15552216 atgagattggacctggaaagact-tagaatcaaaatttggagaatctgacc-gaactcgccacggcgagcagaggctcgcgcctcgcgag 15552129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 22633831 - 22634018
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||  ||||| |||||||||||||    
T  22633831 cagagagcatgcaagatttcgtgattttgacttttgagttgaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22633930  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||||| | ||||||| |||||| |  | || ||  |||||||||||  || |||| ||||||||||||||||||    
T  22633931 atgagattgaacctggaaagact-tagaatgaaactttggataatcaga-ttgaactcgccatggcgagcagaggctctcgcctcgcgag 22634018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 14052932 - 14053149
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||| |||  |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  14052932 cagagagcatgcaagatt-cgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagg 14053030  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||||||||||  ||           ||||  ||||| ||| |||||||||||||||| |||  || |||| |||||||||||| |||||| ||||||||    
T  14053031 atgagattgaacttg-----------gaattaaacttgtgggattctgacctgaactcaccatggcgagcagaggctctcgccttgcgagtgacccagaa 14053119  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  14053120 acagagtgacttgtta-gattttgcgacctt 14053149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 16597148 - 16597028
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||  || ||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  16597148 cagagagcatgcaagattctgtaattttgatttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 16597049  T
Q  114 atgagattgaatctgaaaaga 134  Q
    ||||||||||| ||| |||||    
T  16597048 atgagattgaacctggaaaga 16597028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 227
Target Start/End: Original strand, 17047726 - 17047903
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattg 137  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||| |||             
T  17047726 ttttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaa-ctg--------- 17047815  T
Q  138 tagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgt 227  Q
      ||||| ||||| ||| ||||||||||||||||||||  || |||| ||||||||||||||||||| |||| |||||| |||| |||||    
T  17047816 --gaatgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgccttgt 17047903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 8846865 - 8846748
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  8846865 agatttcgtaattttgacttttgagttgattcttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 8846766  T
Q  127 tgaaaagattgtagaatg 144  Q
    || ||||||| |||||||    
T  8846765 tggaaagattttagaatg 8846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 12774488 - 12774312
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||| || || ||||||||||| |    
T  12774488 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacc 12774389  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    || | |||   ||||||| || |||  |||  ||| ||||||||||||||  || |||| ||||||||||||||||||||    
T  12774388 tggagagacgttagaatg-aattttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagta 12774312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 21814936 - 21815024
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||||| ||| ||||    
T  21814936 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatga 21815024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 21818358 - 21818446
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||||| ||| ||||    
T  21818358 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatga 21818446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 7894077 - 7893974
Alignment:
Q  141 aatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgttaggtttttgcga 240  Q
    |||| ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||    
T  7894077 aatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagagtcttgttaggtttttgcga 7893978  T
Q  241 cctt 244  Q
    ||||    
T  7893977 cctt 7893974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 204
Target Start/End: Original strand, 21815265 - 21815438
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| |||| ||| ||| |||| | |||| |||    
T  21815265 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctg 21815364  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
     |   |||  |||||| ||||||| | |  |||||||||||||||||  || || | |||||||||||||||||||    
T  21815365 gattaatt-aagaatg-aactttttggaagctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 21815438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 39705920 - 39705998
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaaga 106  Q
    |||||||| |||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  39705920 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 39705998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 13845028 - 13844965
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaat 91  Q
    |||||||| |||||||||||| |||||| ||||||||| ||||||||| |||||||||||||||    
T  13845028 gatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgtctgaacatgtctaat 13844965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 16239764 - 16239817
Alignment:
Q  191 ctcgcctcgcgagtaacccagaaacaaagtgtcttgttaggtttttgcgacctt 244  Q
    |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  16239764 ctcgcctcgcgagtgacccagaaacagagtgacttgttaggtttttgcgacctt 16239817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 23374125 - 23374198
Alignment:
Q  162 acctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgttaggtttt 235  Q
    ||||||||||||||| || |||| |||||||||||||||| || ||||||||||| |||| |||||||| ||||    
T  23374125 acctgaactcgccacggcgagcagaggctctcgcctcgcgggtgacccagaaacagagtgacttgttagatttt 23374198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 17046765 - 17046718
Alignment:
Q  68 tttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggat 115  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 17046718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 17053533 - 17053482
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgc 66  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  17053533 agagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgc 17053482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 3332321 - 3332284
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgag 51  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3332321 cagagagcatgcaagatttcgtgattttgacttttgag 3332284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 16348334 - 16348375
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  16348334 attttgacttttgagttgaaccttagatgcttttgagtgcct 16348375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 16356596 - 16356657
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  16356596 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 16356657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 43198220 - 43198316
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||||  |||||||  || |||| | ||||||||| |||||||||||||||||||| |||||| ||||| |||||| | |||  ||||||||||    
T  43198220 gatttcgtagttttgacccttaagttaaaccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaa 43198316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 14679439 - 14679328
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||  |||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  14679439 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgaatgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14679340  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  14679339 gacaagattgaa 14679328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 15464562 - 15464664
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    |||||||  |||||||  || |||||||  ||||||| ||||||||||||||| |||| |||||| ||||| |||||| | |||  |||||||||| |||    
T  15464562 atttcgtagttttgacccttaagttgatatttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctg 15464661  T
Q  129 aaa 131  Q
    |||    
T  15464662 aaa 15464664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 44676108 - 44676046
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| ||||||    
T  44676108 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgattaa 44676046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 14685646 - 14685537
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    |||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||||    
T  14685646 agagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 14685547  T
Q  115 tgagattgaa 124  Q
    | ||||||||    
T  14685546 taagattgaa 14685537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 15094249 - 15094188
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| |||||    
T  15094249 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagatta 15094188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 15121446 - 15121507
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| |||||    
T  15121446 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagatta 15121507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 3413248 - 3413212
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  3413248 ttttgacttttgagttgaaccttagatgcttttgagt 3413212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 13569988 - 13569948
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  13569988 ttttgacttttgagttgaaccttagatgtttttgagtgcct 13569948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 15190795 - 15190743
Alignment:
Q  39 tttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaat 91  Q
    |||||| ||| ||| || ||||||||| |||||||||||||||||||||||||    
T  15190795 tttgacctttaagtcgaaccttagatgtttttgagtgcctgaacatgtctaat 15190743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 18602399 - 18602435
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  18602399 ttttgacttttgagttgaaccttagatgcttttgagt 18602435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 18608993 - 18609029
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  18608993 ttttgacttttgagttgaaccttagatgcttttgagt 18609029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 23843955 - 23843915
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  23843955 ttttgacttttgagttgaaccttagatgtttttgagtgcct 23843915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 7900800 - 7900911
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    ||||||||||||  |||||| ||| ||| ||||||| |||||  |||| | ||  |||||||||||||||||  ||| ||  ||||| ||| ||||||||    
T  7900800 gcagagagcatgttagattttgtgttttcgactttttagttggaccttgggtgtctttgagtgcctgaacatacctagtattgattaggaatgaatgtag 7900899  T
Q  113 gatgagattgaa 124  Q
    ||| ||||||||    
T  7900900 gatcagattgaa 7900911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 15868289 - 15868344
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaag 105  Q
    |||||| ||||||||| ||||||||||||||| |||| |||||| ||||| |||||    
T  15868289 agttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggaaag 15868344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 23838910 - 23838799
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  23838910 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 23838811  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  23838810 gacaagattgaa 23838799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 15099829 - 15099743
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||| ||| ||| || ||||||||| |||||||||||||||| ||| | || | ||||| |||||| |||||  ||||||||||    
T  15099829 ttttgacctttaagtcgaaccttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaa 15099743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 27534502 - 27534441
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||||||||  |||||| || |||| |||||||||||||| |||||||||  |||||||    
T  27534502 gcagagagcatgttagattttgtaatttcgacttttgagttgaaccttagatgtctttgagt 27534441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 32851918 - 32851869
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||| ||||||||| ||||||||||||||| |||| |||||| |||||    
T  32851918 agttgaaccttagatgattttgagtgcctgaatatgtataataatgatta 32851869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 52242856 - 52242921
Alignment:
Q  59 ttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||| ||| |||||||||||||||| |||||| ||| | |||||| | ||| |||||||||||    
T  52242856 ttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaa 52242921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 1951415 - 1951451
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  1951415 ttttgacttttgagttgaaccttagatgcctttgagt 1951451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 2015230 - 2015194
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  2015230 ttttgacttttgagttgaaccttagatgcctttgagt 2015194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 11250219 - 11250251
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||| ||||||||||||||||||    
T  11250219 gacttttgagttgaaccttagatgcttttgagt 11250251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 12570497 - 12570457
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||| |||||||| ||||||||| ||||||||||||    
T  12570497 ttttgacttgtgagttgaaccttagatgtttttgagtgcct 12570457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 14708288 - 14708324
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  14708288 ttttgacttttgagttgaaccttagatgcctttgagt 14708324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 16243054 - 16243090
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  16243054 ttttgacttttgagttgaaccttagatgcctttgagt 16243090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 16351506 - 16351538
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||| ||||||||||||||||||    
T  16351506 gacttttgagttgaaccttagatgcttttgagt 16351538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 16956279 - 16956379
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    ||||||||||||  |||||| ||| ||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  16956279 gcagagagcatgttagattttgtgttttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 16956378  T
Q  113 g 113  Q
    |    
T  16956379 g 16956379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 18222032 - 18222068
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  18222032 ttttgacttttgagttgaaccttagatgcctttgagt 18222068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 18237344 - 18237308
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  18237344 ttttgacttttgagttgaaccttagatgcctttgagt 18237308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 23139722 - 23139686
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  23139722 ttttgacttttgagttgaaccttagatgcctttgagt 23139686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 26243319 - 26243355
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  26243319 ttttgacttttgagttgaaccttagatgcctttgagt 26243355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 26789872 - 26789832
Alignment:
Q  59 ttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||| ||||||||||||||| |||| ||||||||||||    
T  26789872 ttagatgattttgagtgcctgaatatgtataataacgatta 26789832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 28569098 - 28569134
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  28569098 ttttgacttttgagttgaaccttagatgcctttgagt 28569134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 36133616 - 36133652
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  36133616 ttttgacttttgagttgaaccttagatgcctttgagt 36133652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 43255814 - 43255850
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  43255814 ttttgacttttgagttgaaccttagatgcctttgagt 43255850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 45938599 - 45938563
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  45938599 ttttgacttttgagttgaaccttagatgcctttgagt 45938563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 154; Significance: 8e-82; HSPs: 5)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 23921 - 24148
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  23921 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagga 24020  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||||| ||| ||| ||||||||||| ||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||||||| ||| |||||    
T  24021 tgagattgaacctggaaa-attgtagaatgaaacttgtgggattctgacctgaactcgccacagcgagcagaggctctcgcctcgcgagtgacctagaaa 24119  T
Q  215 caaagtgtcttgttaggtttttgcgacctt 244  Q
    ||||||| ||||||| | ||||||||||||    
T  24120 caaagtgccttgtta-gattttgcgacctt 24148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 34553 - 34593
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||| |||||||| ||||||||| ||||||||||||    
T  34553 ttttgacttgtgagttgaaccttagatgtttttgagtgcct 34593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 41196 - 41236
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||| |||||||| ||||||||| ||||||||||||    
T  41196 ttttgacttgtgagttgaaccttagatgattttgagtgcct 41236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 64305 - 64269
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  64305 ttttgacttttgagttgaaccttagatgcctttgagt 64269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 76189 - 76153
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  76189 ttttgacttttgagttgaaccttagatgcctttgagt 76153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 407 - 182
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  407 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 308  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||||||| || ||||||||||||||||||||||| || | ||||||||||| ||||||| ||||||||    
T  307 atgagattgaacctggaaagatt-tagaatgaaactttttgagttctgacctgaactcgccacagcgagtagaggctctcgccacgcgagtgacccagaa 209  T
Q  214 acaaagtgtcttgttaggtttttgcga 240  Q
    ||| |||| ||||||||| ||||||||    
T  208 acagagtgccttgttaggattttgcga 182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 20906 - 20677
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  20906 cagagagcatgtaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 20807  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||  ||| ||||    
T  20806 atgagattgaacctggaaagattatagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacctagaa 20707  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  20706 acagagtgccttgtta-gattttgcgacctt 20677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 149; Significance: 8e-79; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 125085 - 124859
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  125085 cagagagcatgcaagatttggtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 124986  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||||   ||| ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  124985 atgag---gaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 124889  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    | | |||||||||||| | ||||||||||||    
T  124888 aaagagtgtcttgtta-gattttgcgacctt 124859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 63051 - 62934
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  63051 agatttcgtaaatttgacttttgagttgatccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 62952  T
Q  127 tgaaaagattgtagaatg 144  Q
    || ||| ||| |||||||    
T  62951 tggaaatattttagaatg 62934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 175267 - 175202
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctg 79  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  175267 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctg 175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 8978 - 8749
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||    
T  8978 cagagagcatgcaagattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtagg 8879  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||  |||||||||| |||| ||||| ||| ||||||||||||||||||||| || || | ||||||||||||||||| | ||||||||    
T  8878 atgagattgaacctagaaagattgtaaaatggaacttgtgggattctgacctgaactcgccacggccagtagaggctctcgcctcgcgaatgacccagaa 8779  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||||||||||||| ||||||||||||    
T  8778 acagagtgtcttgttagg-ttttgcgacctt 8749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 147; Significance: 1e-77; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 3973 - 3744
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  3973 cagagagcatgcaagatttcgtgattttgacttttgagttgatctttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagg 3874  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| || |||||||||||  ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||| ||||| ||    
T  3873 atgagattgaacctggaatgattgtagaatcaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccaaaa 3774  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| ||||  |||||||| ||||||||||||    
T  3773 acagagtgagttgttagg-ttttgcgacctt 3744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 26 - 244
Target Start/End: Complemental strand, 833 - 616
Alignment:
Q  26 aagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaat 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||| |||||||||||     
T  833 aagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaac 734  T
Q  126 ctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtctt 225  Q
    ||  ||||| | ||||||| ||||||||||| ||||| ||||||||||| | || || | ||||||||||||||||||| ||||||||||| ||||||||    
T  733 ctagaaagaatttagaatgaaacttttggaa-tctgaactgaactcgccgcggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtctt 635  T
Q  226 gttaggtttttgcgacctt 244  Q
    ||||||||||||| |||||    
T  634 gttaggtttttgcaacctt 616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 39262 - 39034
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  39262 cagagagcatgcaagatttcgtaattttgactttgaagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 39163  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| | ||||| ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  39162 atgagattgaacctggaaagatt-ttgaatgaaacttgtgg-attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 39065  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||||||||||||||||||    
T  39064 acatagtgacttgttaggtttttgcgacctt 39034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 147; Significance: 1e-77; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 40414 - 40186
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||| |||||||||    
T  40414 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtagg 40315  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| | ||||||||||||| ||||||||||| ||||||||||||||||||| || || | ||||||||||||||||||| ||||||||    
T  40314 atgagattgaacctg-acagattgtagaatg-aacttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 40217  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||  |||||||||| |||||||||||    
T  40216 acagagtaccttgttaggtgtttgcgacctt 40186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 18299 - 18361
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||| ||||||||||||| |||||||||| ||||||||||| || |||| || ||| ||||||    
T  18299 tttttacttttgagttgaaccttagatgcctttgagtgcctaaagatgtttattaaagattaa 18361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 147; Significance: 1e-77; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 16833 - 17062
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  16833 cagagagcatgcaagatttcttgtttttgactttcgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 16932  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||| |  |||| ||||||||||||||||||| ||||||||    
T  16933 atgagattgaacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaa 17031  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||  ||| ||||| ||||||||||||    
T  17032 acagagtaccttattaggattttgcgacctt 17062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 78980 - 79090
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||| ||||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||||| ||| ||||||||     
T  78980 cagagagcatgcaagattttgtaattctgacttttgagttgaaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtaga 79079  T
Q  114 atgagattgaa 124  Q
    |||||||||||    
T  79080 atgagattgaa 79090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 13696 - 13760
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||| |  |||| ||  |||||||||||||||||| ||||||| | ||||||||||||    
T  13696 cagagagcatgtagaattttgtatttttgacttttgagttgaaccttagaggtttttgagtgcct 13760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 29 - 244
Target Start/End: Complemental strand, 23370 - 23156
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||    
T  23370 atttcgtaattttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctg 23271  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgtt 228  Q
     |||||||||||||| | | |||||||||||||| |||| ||||||||||| |||| |||| |||||||||||||| ||| ||||||| |||||||||||    
T  23270 gaaagattgtagaat-tgaattttggaattctgaactgagctcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgtcttgtt 23172  T
Q  229 aggtttttgcgacctt 244  Q
    ||||||||||||||||    
T  23171 aggtttttgcgacctt 23156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 139; Significance: 7e-73; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 40359 - 40130
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| |||    
T  40359 cagagagcatgcaagatttcgtgattttgacttttgagttgatccgtagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggagg 40260  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||| |||||||||  |||| ||||| ||||||||| || |||| |||||||||||||||| || ||| ||||    
T  40259 atgagattgaacctggaaagattgtagaatgaaacttttgg-tttctaacctgtactcgccacggcgagcagaggctctcgcctcgcgggtgacctagaa 40161  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||  |||| ||||||| | ||||||||||||    
T  40160 accgagtgccttgttatgattttgcgacctt 40130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 39549 - 39679
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||     
T  39549 cagagagcatgccagatttcatgattttgacttttgagttgatccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtaga 39648  T
Q  114 atgagattgaatctgaaaagattgtagaatg 144  Q
    ||||||||||| ||| ||||| |||||||||    
T  39649 atgagattgaacctggaaagaatgtagaatg 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 26662 - 26567
Alignment:
Q  80 aacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccac 176  Q
    |||||||||||||| ||||| ||||||||||||||||||||| || ||| ||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  26662 aacatgtctaataatgattaggaaagaatgtaggatgagattaaacctggaaagattgtagaatgaaacttttgg-attctgacctgaagtcgccac 26567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 59179 - 59308
Alignment:
Q  72 agtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactc 171  Q
    |||||||||||||||||||||| ||||| || ||||||||| ||||||||||| ||||||||| | ||||||| || ||| |  |  |||||| ||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagagaacctgacc-gaactc 59276  T
Q  172 gccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||  || |||| ||||||||||||||||||    
T  59277 gccatggcgagcagaggctctcgcctcgcgag 59308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 26213 - 26169
Alignment:
Q  200 cgagtaacccagaaacaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||||| |||||||||| ||||| ||||||||| ||||||||||||    
T  26213 cgagtgacccagaaaccaagtgccttgttaggattttgcgacctt 26169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 139; Significance: 7e-73; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 339569 - 339797
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| ||| |||||||||    
T  339569 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtagg 339668  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||||||||||| ||||||||| | |||||| |||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  339669 atgagattgaacctggaaagattgtagaatg-aacttttgggaatctgacatgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 339767  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    | | |||| ||||||||| ||||||||||||    
T  339768 atagagtgccttgttagg-ttttgcgacctt 339797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 71789 - 71729
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  71789 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 71729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 140162 - 140126
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  140162 ttttgacttttgagttgaaccttagatgcctttgagt 140126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 235
Target Start/End: Complemental strand, 2353 - 2133
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  2353 agagagcatccaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 2254  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||  || || | ||||| ||||||| ||||| ||||  |||    
T  2253 tgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaa 2154  T
Q  215 caaagtgtcttgttaggtttt 235  Q
    || |||| |||||||| ||||    
T  2153 cagagtgccttgttagatttt 2133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 203
Target Start/End: Original strand, 207161 - 207324
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattg 137  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||| || ||||||||||||||||||||| ||| ||||| |     
T  207161 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaagact- 207259  T
Q  138 tagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||| |||||| |  | ||||| ||||||||||||  || |||| ||||||||||||||||||    
T  207260 tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 631 - 838
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| || ||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  631 cagagagcttgtaagattttgtgattttgaccttcgagttgatccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 730  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |  |||  ||||||||||||||||||| ||||||||    
T  731 atgagattgaatctgaaaagattgtagaatg-aacttttggaaatctgacctgaactcgccacggtgagcggaggctctcgcctcgcgagtgacccagaa 829  T
Q  214 acaaagtgt 222  Q
    ||| |||||    
T  830 acagagtgt 838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 24 - 240
Target Start/End: Original strand, 16227 - 16443
Alignment:
Q  24 gcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattga 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| ||||||||||    
T  16227 gcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattga 16326  T
Q  124 atctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtc 223  Q
    | ||| ||||||| | ||||| ||| ||||||| ||| ||||||||||||||  || |||| ||||||||||||||||||| ||||| ||||| |||| |    
T  16327 acctggaaagattttcgaatgaaacgtttggaaatctaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgcc 16426  T
Q  224 ttgttaggtttttgcga 240  Q
    ||||| || ||||||||    
T  16427 ttgttgggattttgcga 16443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 29 - 244
Target Start/End: Original strand, 51517 - 51731
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||| |||    
T  51517 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 51616  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgtt 228  Q
     ||||||||| ||||| ||||| ||| ||| ||||||||||||||||| || |||| |||||||| |||||| ||| ||||||||||| |||| ||||||    
T  51617 gaaagattgtcgaatgaaacttgtgggattttgacctgaactcgccacggcgagcagaggctctcacctcgctagtgacccagaaacagagtgacttgtt 51716  T
Q  229 aggtttttgcgacctt 244  Q
    | | ||||||||||||    
T  51717 a-gattttgcgacctt 51731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 33003 - 32929
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||| | ||||||| || ||||||||||||||||| |||||| ||||| |||||| | |||  ||||||||||    
T  33003 agttgaactttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaa 32929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 204
Target Start/End: Original strand, 15233 - 15422
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||||||||||||     
T  15233 cagagagcatgcaagatatcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtaga 15332  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
    ||||||||||||||| | ||||| ||||||| |||||| |||| |||||||||||||||||| ||| |||| |||||||||||||||||||    
T  15333 atgagattgaatctggatagattttagaatgaaactttgggaa-tctgacctgaactcgccatagcgagcagaggctctcgcctcgcgagt 15422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 204
Target Start/End: Complemental strand, 20615 - 20426
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||     
T  20615 cagagagcatgcaagatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 20516  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
    || |||||||| ||| ||||||| ||||||| |||||||||| ||||||||||| ||||||||  | |||| |||||||||||||||||||    
T  20515 ataagattgaacctggaaagatt-tagaatgaaacttttggagttctgacctgagctcgccacgacgagcagaggctctcgcctcgcgagt 20426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 126; Significance: 4e-65; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 16588 - 16361
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  16588 agagagcatgcaagatttcaagattttgacttttgagttgatccttagg-gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 16490  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
     ||||||||| ||| |||||||||||||| | | |||||||||||||| |||| |||||||| || | || |||| ||| |||||| ||| |||||||||    
T  16489 cgagattgaacctggaaagattgtagaat-tgaattttggaattctgaactgagctcgccacggcgatcagaggccctcacctcgcaagtgacccagaaa 16391  T
Q  215 caaagtgtcttgttaggtttttgcgacctt 244  Q
    || || ||||||||||||||||||||||||    
T  16390 cagagagtcttgttaggtttttgcgacctt 16361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 32577 - 32802
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||| ||||| ||| || || ||     
T  32577 cagagagcttgcaagatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggaga 32676  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| || |||||  | |   |||  ||||||||||||| || | |||||| |||||||||||| ||||| ||    
T  32677 atgagattgaacctgtaaagattttagaatg-aatttttgtgagttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataa 32775  T
Q  214 acaaagtgtcttgttaggtttttgcga 240  Q
    ||| | |||||||||||| ||||||||    
T  32776 acagaatgtcttgttaggattttgcga 32802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 46428 - 46203
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||| ||||| ||| || || ||     
T  46428 cagagagcttgcaagatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggaga 46329  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||| ||||||| ||||||| || |||||  | |   |||  ||||||||||||| || | |||||| |||||||||||| ||||| ||    
T  46328 atgagattgaacctgtaaagattttagaatg-aatttttgtgagttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataa 46230  T
Q  214 acaaagtgtcttgttaggtttttgcga 240  Q
    ||| | |||||||||||| ||||||||    
T  46229 acagaatgtcttgttaggattttgcga 46203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 19671 - 19707
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  19671 ttttgacttttgagttgaaccttagatgcctttgagt 19707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 5739 - 5968
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  5739 cagagagcatgcaagatttcgtgttttttacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagg 5838  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||  |||||| | ||||| || ||  || ||||||||||||||| ||||| || |||| ||||||||||||||  ||| ||||||||    
T  5839 atgagattgaacctgggaagattattgaatgaaatttgcgggattctgacctgaacttgccacggcgagcagaggctctcgcctcgttagtgacccagaa 5938  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  5939 acagagtgccttgtta-gattttgcgacctt 5968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 123; Significance: 3e-63; HSPs: 4)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 5010 - 4809
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||| |    
T  5010 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 4911  T
Q  115 tgagattgaatctgaaaaga-ttgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||||||||| ||| ||||| || ||||||| |||||| |||| ||||||||||||||||||  || |||| |||||||||| |||||||| ||||||||    
T  4910 tgagattgaacctggaaagatttttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaa 4812  T
Q  214 aca 216  Q
    |||    
T  4811 aca 4809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 12592 - 12391
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||| |    
T  12592 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 12493  T
Q  115 tgagattgaatctgaaaaga-ttgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||||||||| ||| ||||| || ||||||| |||||| |||| ||||||||||||||||||  || |||| |||||||||| |||||||| ||||||||    
T  12492 tgagattgaacctggaaagatttttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaa 12394  T
Q  214 aca 216  Q
    |||    
T  12393 aca 12391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 22544 - 22343
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||| |    
T  22544 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 22445  T
Q  115 tgagattgaatctgaaaaga-ttgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||||||||| ||| ||||| || ||||||| |||||| |||| ||||||||||||||||||  || |||| |||||||||| |||||||| ||||||||    
T  22444 tgagattgaacctggaaagatttttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaa 22346  T
Q  214 aca 216  Q
    |||    
T  22345 aca 22343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 18286 - 18326
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  18286 ttttgacttttgagttgaaccttagatgtttttgagtgcct 18326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 14 - 176
Target Start/End: Original strand, 17626 - 17788
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  17626 cagagagcatgcaagatttcatgattttgacttttgagttaaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 17725  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccac 176  Q
    ||||||||||| ||| | ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  17726 atgagattgaacctggatagattgtagaatgaaacttgtgggattctgacctgaactcgccac 17788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 678 - 896
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  678 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 777  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |           |||| || ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||    
T  778 atgagattgaacc-----------tagattgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 866  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  867 acagagtgacttgtta-gattttgcgacctt 896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 681 - 891
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  681 cagagagcattcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagg 780  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  ||||| ||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  781 atgagattgaacctg-----------gaattaaacttgtggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtaacccagaa 869  T
Q  214 acaaagtgtcttgttaggtttt 235  Q
    ||| |||| |||||||| ||||    
T  870 acagagtgacttgttagatttt 891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 1696 - 1891
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||     
T  1696 cagagagcttgcaagattctgtgattttgacttttgagttgatccttagatg-ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 1794  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccag 211  Q
    ||||||||||| ||| ||||||| ||||||| ||| ||||||| ||||||||||| ||||||  || |||| ||||||||||||||||||| ||||||    
T  1795 atgagattgaacctggaaagattttagaatgaaac-tttggaaatctgacctgaattcgccatggcgagcagaggctctcgcctcgcgagtgacccag 1891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 13703 - 13485
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  13703 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtagg 13604  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||||| |||| |||           ||||| ||||| ||| ||||||||||||||||||||| || |||| ||||||||||||||||||| ||| ||||    
T  13603 atgagactgaacctg-----------gaatgaaacttgtggcattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaa 13515  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
     || |||| ||||||| | ||||||||||||    
T  13514 tcagagtgccttgtta-gattttgcgacctt 13485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 9872 - 9836
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  9872 ttttgacttttgagttgaaccttagatgcctttgagt 9836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 428 - 209
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  428 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 329  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||||||||||||||           ||||  ||||| ||| ||||||||||||||||||||  || |||| ||||||||||||||| ||| ||||| ||    
T  328 atgagattgaatctg-----------gaattaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataa 240  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
      | |||| |||||||| ||||||| |||||    
T  239 taagagtgacttgttagatttttgcaacctt 209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 5204 - 4985
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  5204 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 5105  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    |||||||||||||||           ||||  ||||| ||| ||||||||||||||||||||  || |||| ||||||||||||||| ||| ||||| ||    
T  5104 atgagattgaatctg-----------gaattaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataa 5016  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
      | |||| |||||||| ||||||| |||||    
T  5015 taagagtgacttgttagatttttgcaacctt 4985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 18576 - 18712
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  18576 cagagagcatgcaagattttgtgattttgacttttgagatgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 18675  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaactt 150  Q
    ||||||||||| ||| ||||||||||||||| |||||    
T  18676 atgagattgaacctggaaagattgtagaatgaaactt 18712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 10055 - 10265
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  10055 cagagagcatgcaagatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 10154  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  ||||| ||| ||||||||||||||||||||| |  |||| ||||||||||||||||||| ||||||||    
T  10155 atgagattgaacctg-----------gaattaaacttgtgggattctgacctgaactcgccacggggagcagaggctctcgcctcgcgagtgacccagaa 10243  T
Q  214 acaaagtgtcttgttaggtttt 235  Q
    ||| |||| |||||||| ||||    
T  10244 acagagtgacttgttagatttt 10265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 580 - 810
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||     
T  580 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaga 679  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaactt-ttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccaga 212  Q
    | ||||||||| |||     | |  |||||| ||||| |||||| ||||||||||||||||||  || |||| ||| || ||||||| |||| ||| |||    
T  680 acgagattgaacctg-gtttagtagagaatgaaacttgttggaaatctgacctgaactcgccatggcgagcagaggttcccgcctcgtgagtgacctaga 778  T
Q  213 aacaaagtgtcttgttaggtttttgcgacctt 244  Q
    |||| || ||||||||||| |||| |||||||    
T  779 aacagagagtcttgttaggatttttcgacctt 810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 8110 - 8220
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||||| || |||||| | |||| |||| || |||| ||||||||||||  ||||| ||||| | |||  | |||     
T  8110 cagagagcttgcaagatttcgtgattttgagttgtgagtttaaccttggatgtttatgagggcctgaacatgtacaataatgattaggcaaggttttaga 8209  T
Q  114 atgagattgaa 124  Q
    |||||||||||    
T  8210 atgagattgaa 8220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 2703 - 2826
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  2703 cagagagcttgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 2802  T
Q  114 atgagattgaatctgaaaagattg 137  Q
    ||||||||||| ||| ||||||||    
T  2803 atgagattgaacctggaaagattg 2826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 204
Target Start/End: Complemental strand, 17268 - 17094
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||||||||| |||    
T  17268 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17169  T
Q  129 aaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagt 204  Q
     | ||||| ||||||  ||||||  ||| | ||||||||||||||||  || |||| |||||||||||||||||||    
T  17168 gatagattttagaataaaactttgagaa-tatgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 17094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 7471 - 7576
Alignment:
Q  96 attaagaaagaatgtaggatgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgc 195  Q
    |||| |||||||||||||||||||||||| ||| ||||| | ||||||| |||||| |  | |||||| |||||||||||  ||||||| ||||||||||    
T  7471 attaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaactttggataatctgac-tgaactcgccatggcaagcagaggctctcgc 7568  T
Q  196 ctcgcgag 203  Q
    ||||||||    
T  7569 ctcgcgag 7576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 10661 - 10441
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||  ||||| ||||||           
T  10661 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgccttaacatgcctagtagtgattaggaaaga------- 10569  T
Q  114 atgagattgaatctgaaaagattgtagaatg-taacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccaga 212  Q
    ||||||||||| ||| ||||||| |||||||  || ||||  |||||||||||||||||||||| || |||| ||  || |||||||||||| ||| |||    
T  10568 atgagattgaacctggaaagattttagaatgaaaaattttcaaattctgacctgaactcgccacggcgagcagagcttcccgcctcgcgagtgacctaga 10469  T
Q  213 aacaaagtgtcttgttaggtttttgcga 240  Q
    ||||||||| ||||||||| ||||||||    
T  10468 aacaaagtgccttgttaggattttgcga 10441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 2064 - 2250
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    |||||||||||||||||| || ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |    
T  2064 agagagcatgcaagattttgtaattttgactgttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 2163  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    |||||||||| ||||||||| | ||||||| || ||| |  | ||||||| ||||||||||  || |||| ||||||||||||||||||    
T  2164 tgagattgaacctgaaaagact-tagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 2250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 13987 - 13777
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||     
T  13987 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagc 13888  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  ||||| ||  ||||||| ||||||||||||| || |||| ||||||||||||||||||  ||||||||    
T  13887 atgagattgaacctg-----------gaattaaacttgtgagattctgagctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaa 13799  T
Q  214 acaaagtgtcttgttaggtttt 235  Q
    ||| |||| |||||||| ||||    
T  13798 acagagtgacttgttagatttt 13777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 12427 - 12611
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||  ||||| |||||||||||||    
T  12427 cagagagcatgcaagatttcgtgattttgacttttgagatgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 12526  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgc 200  Q
    ||||||||||| ||| |||||   ||||||| |||||| |  | ||||| ||||||||||||  || |||| |||||||||||||||    
T  12527 atgagattgaacctggaaaga-catagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgc 12611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 4760 - 4956
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  4760 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 4859  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  ||||| ||| |||||||||||||||||||| ||  |||| ||| ||||||||||||||| || |||||    
T  4860 atgagattgaacctg-----------gaattgaacttatgggattctgacctgaactcgccaaagagagcagaggatctcgcctcgcgagtgacacagaa 4948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 13226 - 13335
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  13226 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 13325  T
Q  114 atgagattga 123  Q
    ||||||||||    
T  13326 atgagattga 13335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 9452 - 9639
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||| ||||||||||||||| |||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||| |||||||||||||    
T  9452 cagatagcatgcaagatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtagg 9551  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||||||| ||||| | ||||||| |||||| |  | ||||| ||||||||| ||  || |||| ||||||||||||||||||    
T  9552 atgagattgaatctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 93; Significance: 2e-45; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 15094 - 15312
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  ||||||||||| |||||| || ||||||||||||||||||| || ||||||||||| ||||| |||||||||||||    
T  15094 cagagagcatgcaagatttcgtatttttgacttttaagttgaaccgtagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtagg 15193  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  ||||| | | ||||||||||||||||||||| |  |||| ||||||||||||||||||| ||||||||    
T  15194 atgagattgaacctg-----------gaataaaacttgtaggattctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaa 15282  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| ||||||| | ||||||||||||    
T  15283 acagagtgacttgtta-gattttgcgacctt 15312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 32894 - 32968
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtct 88  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  32894 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgaatgcctgaacatgtct 32968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 7766 - 7704
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||| |||||||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  7766 ttttgacctttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattaa 7704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 7913 - 8099
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||| ||||||||||||||    
T  7913 agagagcatgcaagattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagga 8012  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    |||||||||| ||| ||||| | ||||||| |||||| |  | ||| | | ||||||||||  || |||| ||||||||||||||||||    
T  8013 tgagattgaacctggaaagact-tagaatgaaactttggagaatct-aacagaactcgccatggcgagcagaggctctcgcctcgcgag 8099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 29039 - 28929
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||     
T  29039 cagagagcatgcaagatttcgtgattttgacttttgagtagatccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtaga 28940  T
Q  114 atgagattgaa 124  Q
    |||||||||||    
T  28939 atgagattgaa 28929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 28210 - 28110
Alignment:
Q  138 tagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgttaggtttttg 237  Q
    ||||||| ||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||||| |||| ||||| ||| |||||    
T  28210 tagaatgaaactttttgaattctgacctgaactcgccacggcgagcaaaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttg 28111  T
Q  238 c 238  Q
    |    
T  28110 c 28110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 5026 - 4797
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| ||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| |||||||||| ||| || || | |||| |||||     
T  5026 cagagagcttgcaagatttcgtgactttaacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtaga 4927  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| ||||||||||| ||||||| ||||||||    || ||||||  |||||||  || |||| ||||||||||||||| ||  ||||||||    
T  4926 atgagattgaacctgaaaagattttagaatg-aacttttgtcgatcagacctgtcctcgccatggcgagcaaaggctctcgcctcgcaagctacccagaa 4828  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| | || | ||||||| ||||||||||||    
T  4827 acagaatgccatgttaggattttgcgacctt 4797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 10355 - 10319
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  10355 ttttgacttttgagttgaaccttagatgcctttgagt 10319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 230
Target Start/End: Complemental strand, 5339 - 5135
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||    
T  5339 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtagga 5240  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaa 214  Q
    |||||||||| |||           ||||| ||||| ||   |||||||||||||||||||| || || | ||||||| ||||||||||| ||| |||||    
T  5239 tgagattgaacctg-----------gaatgaaacttgtgaggttctgacctgaactcgccacggcgagtagaggctcttgcctcgcgagtgacctagaaa 5151  T
Q  215 caaagtgtcttgttag 230  Q
    || |||| ||||||||    
T  5150 cagagtgacttgttag 5135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 530 - 344
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||  ||||||||||||||||||||||||  ||||| |||||||||||||    
T  530 cagagagcatgcaagatttcgtgattttgacttttgaattgaaccttagatgc-cttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 432  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||| | | ||||||| |||||| |  | ||||| ||||||||||||  || |||| ||||||||||||||||||    
T  431 atgagattgaacctggaaatact-tagaatggaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 16161 - 15974
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||     
T  16161 cagagagcatgcaagattttgtaattttgactttagagttgatccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaga 16062  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||||||||| |  | |||| || ||| |  | ||||||| ||||||||||  || |||| ||||||||||||||||||    
T  16061 atgagattgaacctgaaaagact-caaaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 15974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 1845 - 1754
Alignment:
Q  9 aggagcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||| ||||||||||| |||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| |||| || ||| ||||||    
T  1845 aggaccagagagcatgtaagatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtttattaaagattaa 1754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 216
Target Start/End: Complemental strand, 32553 - 32365
Alignment:
Q  17 agagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatg 116  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||    
T  32553 agagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatg 32454  T
Q  117 agattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaaca 216  Q
    |||||||| |||           ||||  ||||| ||| |||||||| |||||| ||||| || |||| ||||||||||||||||||| |||||||||||    
T  32453 agattgaacctg-----------gaattaaacttgtgggattctgacttgaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaca 32365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 79950 - 80137
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||| ||||  ||||||||||||||||||||||||  ||||| |||||||||||||    
T  79950 cagagagcatgcaagatttcgtgattttgacttttgagttgaacattaaatgccattgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 80049  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||||||||||| ||| ||||| | ||||||| |||||| |  | ||||| ||||||||| ||  || |||| ||||||||||||||||||    
T  80050 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgacatggcgagcagaggctctcgcctcgcgag 80137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 21212 - 21298
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||| ||||||||||||| ||||||||| |||| ||| ||| || |||| || ||| ||||||   | |||||||||||||||||||    
T  21212 tttttacttttgagttgaaccttagatgttttttagtaccttaagatgtgtattaaggattaaatgataatgtaggatgagattgaa 21298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 228
Target Start/End: Complemental strand, 16771 - 16568
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  16771 cagagagcatgcaagatttcgtacttttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 16672  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    | ||||||||| ||||           |||  ||||| ||| ||| ||||| ||||||| ||| || |||| ||||||||||||||||||| ||| ||||    
T  16671 acgagattgaacctga-----------aattaaacttatgggattttgaccagaactcggcacggcgagcagaggctctcgcctcgcgagtgacctagaa 16583  T
Q  214 acaaagtgtcttgtt 228  Q
    ||| |||| ||||||    
T  16582 acagagtgacttgtt 16568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 10647 - 10540
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  10647 cagagagcttgcaagatttcgtgattttgacctttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagg 10548  T
Q  114 atgagatt 121  Q
    ||||||||    
T  10547 atgagatt 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 2444 - 2226
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||  |||| ||| |||||||||    
T  2444 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtagg 2345  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  |||||  || || |||||||||||||||||| || |||| ||||||||||||||||||| ||| ||||    
T  2344 atgagattgaacctg-----------gaattaaacttgagggatgctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaa 2256  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| | ||||| | ||||||||||||    
T  2255 acagagtgacatgtta-gattttgcgacctt 2226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 10412 - 10226
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    |||||||||| ||||||| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||  ||||| ||||||||||||||    
T  10412 agagagcatgtaagattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtagga 10313  T
Q  115 tgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    |||||||||| ||| ||||| | ||||| | |||||| |  | ||||| ||||||||||||  || |||| ||||||||||||||||||    
T  10312 tgagattgaacctggaaagact-tagaaggaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 133143 - 132966
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  133143 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 133044  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    || ||||| | ||||||| || |||  |||  ||| ||||||||||||||  || |||| ||||||||||||||||||||    
T  133043 tggaaagactttagaatgaaattttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagta 132966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 24268 - 24456
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttt-gacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||||||||||||||||||| |||||||||||| | ||||||||||  ||||||||||||||||||||||||  ||||| |||||||| |||    
T  24268 cagagagcatgcaagatttcgtgatttttgacttttgagtttaaccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttag 24367  T
Q  113 gatgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    |||||||||||| ||  ||||| | ||||||| |||||| |  | ||||| ||||||||||||  || |||| ||||||||||||||||||    
T  24368 gatgagattgaacctagaaagact-tagaatgaaactttggataatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 20044 - 20154
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || || ||||||||||||     
T  20044 cagagagcatgcaagatttcgtgaatttgacttttgagttgatccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtaga 20143  T
Q  114 atgagattgaa 124  Q
    |||||||||||    
T  20144 atgagattgaa 20154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 65412 - 65479
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||||||||| ||||||| ||  |||||||||||||||||| ||||||||| |||||||||||||||    
T  65412 cagagagcatgtaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 65479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 54017 - 53981
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  54017 ttttgacttttgagttgaaccttagatgcctttgagt 53981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 28899 - 29008
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    |||||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |    
T  28899 agagagcatgcaagattttgtaattttgacttttgggttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 28998  T
Q  115 tgagattgaa 124  Q
    ||||||||||    
T  28999 tgagattgaa 29008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 7841 - 7909
Alignment:
Q  163 cctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgttagg 231  Q
    ||||||||||||| ||| || | |||||||||||||||||||  |||||  ||||| || |||||||||    
T  7841 cctgaactcgccatagcgagtaaaggctctcgcctcgcgagttgcccagttacaaaatgccttgttagg 7909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 244
Target Start/End: Original strand, 11170 - 11360
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattgtaga 141  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||           ||    
T  11170 gacttttgagttgaaccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------ga 11258  T
Q  142 atgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgttaggtttttgcgac 241  Q
    ||| ||||| ||| || |||||||||||||||||  || || | |||||||| |||||||||| || ||||||||||||| ||||||| | |||||||||    
T  11259 atgaaacttgtgggatactgacctgaactcgccaaggcgagaagaggctctcacctcgcgagtgacacagaaacaaagtgacttgtta-gattttgcgac 11357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 14106 - 14057
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||| ||||||||| ||||||||||||||| |||| |||||| |||||    
T  14106 agttgaaccttagatgattttgagtgcctgaatatgtataataatgatta 14057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 21392 - 21285
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagga 114  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  21392 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtagga 21293  T
Q  115 tgagattg 122  Q
    ||||||||    
T  21292 tgagattg 21285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 21265 - 21200
Alignment:
Q  163 cctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgtt 228  Q
    |||||||||||||| || |||| |||||||||||||| |||| ||||| ||||| |||| ||||||    
T  21265 cctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccaaaaacagagtgacttgtt 21200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 230
Target Start/End: Complemental strand, 47478 - 47273
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| ||||| ||| |||||||||    
T  47478 cagagagcatgcaagatttcgtattgttgacttttgagttgaaccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtagg 47379  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  ||||| ||| |||||||||||| |||||||| |   ||| ||||||||||||||||||| ||||| ||    
T  47378 atgagattgaacctg-----------gaattaaacttgtgggattctgacctgagctcgccacggagcgcagaggctctcgcctcgcgagtgacccaaaa 47290  T
Q  214 acaaagtgtcttgttag 230  Q
     || |||| ||||||||    
T  47289 ccagagtgacttgttag 47273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 64306 - 64368
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  64306 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattaa 64368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 7301 - 7184
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  7301 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 7202  T
Q  127 tgaaaagattgtagaatg 144  Q
    || ||||||| |||||||    
T  7201 tggaaagattttagaatg 7184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 9579 - 9391
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||     
T  9579 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 9480  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttg-gaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
     |||||||| | ||| ||||| | ||||||| || ||||| |||  ||| ||||||||||||||  || || | ||||||||||||||||||    
T  9479 gtgagattggacctggaaagagtttagaatg-aatttttgtgaa--ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 7102 - 6884
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||| |||||||||| |  |||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||  |||| ||| |||||||||    
T  7102 cagagagcacgcaagatttcatatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtagg 7003  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    ||||||||||| |||           ||||  |||||  || || |||||||||||||||||| || |||| ||||||||||||||||||| ||||| ||    
T  7002 atgagattgaacctg-----------gaattaaacttgagggatgctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataa 6914  T
Q  214 acaaagtgtcttgttaggtttttgcgacctt 244  Q
    ||| |||| | ||||| | ||||||||||||    
T  6913 acagagtgacatgtta-gattttgcgacctt 6884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 28440 - 28617
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  28440 agatttcgtacttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 28539  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    |   |||| | ||||||| || |||  |||  ||| ||||||||||||||  || |||| ||||||||||||||||||||    
T  28540 tacgaagactttagaatgaaattttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagta 28617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 32573 - 32396
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    |||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  32573 agattttgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 32474  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    || ||||| | ||||||| || |||  |||  ||| ||||||||||||||  || |||| |||||||| |||||||||||    
T  32473 tggaaagactttagaatgaaattttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcacctcgcgagta 32396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 227
Target Start/End: Complemental strand, 1382 - 1204
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattg 137  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||| |||             
T  1382 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctg--------- 1292  T
Q  138 tagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgt 227  Q
      ||||| ||||| ||| ||||||||| ||||||||||  || |||| ||||||||||||| ||||| |||| ||||||||||| |||||    
T  1291 --gaatgaaacttgtgggattctgaccagaactcgccatggcgagcagaggctctcgcctcacgagtgacccggaaacaaagtgccttgt 1204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 6449 - 6556
Alignment:
Q  17 agagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatg 116  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||| ||||| |||||||||||| |||    
T  6449 agagaatgcaagatttcatgattttgacttttgagatgatccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatg 6548  T
Q  117 agattgaa 124  Q
    ||||||||    
T  6549 agattgaa 6556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 6561 - 6625
Alignment:
Q  163 cctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgt 227  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| | |||| |||||    
T  6561 cctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaatagagtgccttgt 6625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 52067 - 51861
Alignment:
Q  18 gagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatga 117  Q
    |||| |||||||||||||  |||| ||||||||||| | |||| ||||| |||||||||||||||| ||||||||| ||||| |||||||||||||| ||    
T  52067 gagcttgcaagatttcgtattttttacttttgagttaaacctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacga 51968  T
Q  118 gattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaa 217  Q
    ||||||| |||           ||||| |||||  || ||||| |||||| |||||||| || |||| ||||||||||||||||||| |||||||||||     
T  51967 gattgaacctg-----------gaatgaaacttacgggattctaacctgagctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacag 51879  T
Q  218 agtgtcttgttaggtttt 235  Q
    |||| |||||||| ||||    
T  51878 agtgacttgttagatttt 51861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 72; Significance: 7e-33; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 227
Target Start/End: Complemental strand, 3949 - 3771
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattg 137  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||| ||| ||| ||||| |||||||||||||||||||||||| |||             
T  3949 ttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctg--------- 3859  T
Q  138 tagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgt 227  Q
      ||||| ||||| ||| ||||||||||||||||||||  || |||| ||||||||| ||||||||| |||| |||||| |||| |||||    
T  3858 --gaatgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgt 3771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 227
Target Start/End: Complemental strand, 8013 - 7835
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctgaaaagattg 137  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||| ||| ||| ||||| |||||||||||||||||||||||| |||             
T  8013 ttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctg--------- 7923  T
Q  138 tagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgt 227  Q
      ||||| ||||| ||| ||||||||||||||||||||  || |||| ||||||||| ||||||||| |||| |||||| |||| |||||    
T  7922 --gaatgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgt 7835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 27296 - 27345
Alignment:
Q  50 agttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||| | ||||||| |||||||||||||||||||| |||||| |||||    
T  27296 agttgaactttagatgattttgagtgcctgaacatgtataataatgatta 27345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 1934 - 2109
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatctg 128  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||| |||||| || || |||||||||||  |     
T  1934 atttcgtatttttgacttttgagttgatccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacata 2033  T
Q  129 aaaagattgtagaatgtaacttttggaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    |||||| | ||||||| || |||  |||  ||| ||||||||||||||  ||||||| ||||||||||||||||||||    
T  2034 aaaagactttagaatgaaattttgtgaa--ctgaacctgaactcgccatggcaagcagaggctctcgcctcgcgagta 2109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 620 - 437
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| |||||||||||||| ||||||||||||   |||||||||||| |||||||||||||| ||||| |||||| || || |||||||||||      
T  620 agatttcgtaattttgacttttgaattgatccttagacttttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaact 521  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccag 211  Q
    || ||||||| ||||||| || |||||  | |   ||||||||||||||  || |||| ||||||||||||||||||| ||||||    
T  520 tggaaagattttagaatg-aatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 12416 - 12321
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||| |||||| ||||| |||||||||||| |||||||||||    
T  12416 atttcgtgattttgacttttgaattgatccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaa 12321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 10890 - 10969
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataa 93  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10890 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataa 10969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 161173 - 161078
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| || || |||||||||||    
T  161173 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaa 161078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 39863 - 39754
Alignment:
Q  130 aaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgtta 229  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||||| |||| ||||| |    
T  39863 aaagattgtagaatg-aacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtca 39765  T
Q  230 ggtttttgcga 240  Q
    || ||||||||    
T  39764 ggattttgcga 39754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 74949 - 75058
Alignment:
Q  130 aaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaaacaaagtgtcttgtta 229  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||||| |||| ||||| |    
T  74949 aaagattgtagaatg-aacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtca 75047  T
Q  230 ggtttttgcga 240  Q
    || ||||||||    
T  75048 ggattttgcga 75058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 101884 - 101708
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||| |||||| || || ||||||||||| |    
T  101884 agatttcgtaatttttacttttgagttgatccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 101785  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    || | ||| | ||||||| || |||  ||| | ||||||||||||||||  || |||| ||||||| |||||| |||||    
T  101784 tggagagactttagaatg-aattttgtgaact-tgacctgaactcgccatggcgagcagaggctcttgcctcgggagta 101708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 39640 - 39702
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtcta 89  Q
    ||||||| | ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  39640 agatttcataattttgacttttgagttgatccttagatgttttcgagtgcctgaacaggtcta 39702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 2434 - 2610
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    ||||||| | ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||| ||||| |||||| || || ||||| ||||| |    
T  2434 agatttcataattttgacttttgggatgatccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacc 2533  T
Q  127 tgaaaagattgtagaatgtaacttttggaattctg-acctgaactcgccacagcaagcataggctctcgcctcgcgagta 205  Q
    || ||||||| ||||||| || || || |   ||| ||||||||||||||  || || | ||||||||||||||||||||    
T  2534 tgtaaagattttagaatgaaatttgtgaa---ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagta 2610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 19756 - 19639
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    |||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| || || || ||||||||||| |    
T  19756 agattttgtaattttgacttctgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacc 19657  T
Q  127 tgaaaagattgtagaatg 144  Q
    || ||||||| |||||||    
T  19656 tggaaagattttagaatg 19639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 48092 - 48165
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||| |||||||||||||||||| ||| ||||||||| ||||||||| ||||| |||| || ||| ||||||    
T  48092 agattttgtgattttgacttttgagatgaaccttagatgtttttgagtgtctgaagatgtatattaaagattaa 48165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 3420 - 3325
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| || ||  ||||||||||    
T  3420 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaa 3325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 45420 - 45596
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaatc 126  Q
    |||||| || ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||| |||||| ||  | ||||||||||| |    
T  45420 agattttgtaatttttacttttgagttgatccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacc 45519  T
Q  127 tgaaaagattgtagaatgtaacttttg-gaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgag 203  Q
    ||  |||| | ||||||| |  ||||| ||||| | ||||||||||||||  || || | ||||||||||||||||||    
T  45520 tggtaagactttagaatgaattttttgtgaattgt-acctgaactcgccatggcgagtagaggctctcgcctcgcgag 45596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2044 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 1075 - 1134
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1075 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagt 1134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 2277 - 2372
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| |||||| || ||  ||||||||||    
T  2277 atttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaa 2372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 6083 - 5986
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||| |||||| || ||  ||||||||||    
T  6083 agatttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaa 5986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 1082 - 976
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||  |||||||||  ||||||||||||||  ||||| ||  ||||||| |    
T  1082 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgtctttgagtgctagaacatgtctaatattgattaggagtgaatgtaag 983  T
Q  114 atgagat 120  Q
    |||||||    
T  982 atgagat 976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 10200 - 10271
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||| |||||||| |||||| ||| ||||||||| ||||||||||||||||||||||||||| |||||    
T  10200 gatttcgtaattttgacctttgagatgaaccttagatgtttttgagtgcctgaacatgtctaataatgatta 10271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 228
Target Start/End: Complemental strand, 1778 - 1575
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  ||||||||||| | |||| | ||||||||||||| ||||||||||||||||||||  |||||   || |  |||||    
T  1778 cagagagcatgcaagatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtagg 1679  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    | | ||||||| |||           ||||  ||||| ||||||||| | |||||||||| || || |||| ||||||||||||||||||| ||| ||||    
T  1678 acgtgattgaacctg-----------gaattaaacttatggaattctaaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaa 1590  T
Q  214 acaaagtgtcttgtt 228  Q
    ||| |||| ||||||    
T  1589 acagagtgacttgtt 1575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 228
Target Start/End: Complemental strand, 7755 - 7552
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtagg 113  Q
    ||||||||||||||||||||||  ||||||||||| | |||| | ||||||||||||| ||||||||||||||||||||  |||||   || |  |||||    
T  7755 cagagagcatgcaagatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtagg 7656  T
Q  114 atgagattgaatctgaaaagattgtagaatgtaacttttggaattctgacctgaactcgccacagcaagcataggctctcgcctcgcgagtaacccagaa 213  Q
    | | ||||||| |||           ||||  ||||| ||||||||| | |||||||||| || || |||| ||||||||||||||||||| ||| ||||    
T  7655 acgtgattgaacctg-----------gaattaaacttatggaattctaaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaa 7567  T
Q  214 acaaagtgtcttgtt 228  Q
    ||| |||| ||||||    
T  7566 acagagtgacttgtt 7552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 16150 - 16083
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||||| |||||||||||  ||||||||||||| |||| || ||||||||||||||||||||||    
T  16150 cagagagcatccaagatttcgtatttttgacttttgaattgaaccatagatgcttttgagtgcctgaa 16083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 13429 - 13351
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaaga 106  Q
    |||||||| |||||||| |||||||||| ||||||||| ||||||||||||||||||||||||| | ||||| ||||||    
T  13429 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaga 13351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 29836 - 29947
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| || |||||||||||| |||||  ||||   |||  ||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  29836 gcagagagcatgtaagattttgtaattttgactttttagttggaccttgagtgccattgagtgcctgaacatacctagtaatgattaggaatgaatgtag 29935  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  29936 gacaagattgaa 29947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 41832 - 41943
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| || |||||||||||| |||||  ||||   |||  ||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  41832 gcagagagcatgtaagattttgtaattttgactttttagttggaccttgagtgccattgagtgcctgaacatacctagtaatgattaggaatgaatgtag 41931  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  41932 gacaagattgaa 41943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 14980 - 14914
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctga 80  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| ||||||||||    
T  14980 cagagagcatgcaagattttgtaattttgactttagagttgatccttagatgctttggagtgcctga 14914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 130397 - 130335
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtcta 89  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  130397 agatttcgtaattttgacttttgagttgatcctttgatgtttttgagtgcctgaacatgtcta 130335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 23668 - 23632
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  23668 ttttgacttttgagttgaaccttagatgcctttgagt 23632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 242534 - 242434
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  242534 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 242435  T
Q  113 g 113  Q
    |    
T  242434 g 242434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 7026 - 6930
Alignment:
Q  27 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||  |||| |||||| || ||  ||||||||||    
T  7026 agatttcgtaattttgacttttgagttgatcctttgatg-ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaa 6930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 17343 - 17402
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||    
T  17343 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagt 17402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 15049 - 15108
Alignment:
Q  15 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  15049 agagagcatgcaagatttcgtgattttcacttttgagttgaaccttagatgcctttgagt 15108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 20483 - 20397
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||||||||||| ||  |||||||||||||||||| ||||||||| ||||||||||||| | ||| ||| ||| ||||||    
T  20483 cagagagcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctggagatgcctattaaagattaa 20397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 70296 - 70210
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||||  |  |||||||||||||||||| ||||||||| ||||||||||||||| |||| || ||| ||||||    
T  70296 cagagagcatgcaagattttatagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagattaa 70210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 10238 - 10274
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  10238 ttttgacttttgagttgaaccttagatgcctttgagt 10274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 1370 - 1308
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||||| ||| |||||    
T  1370 attttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtctattaaagatta 1308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 30379 - 30449
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||| || || | |||||| |||||    
T  30379 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatctttaataaagatta 30449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 742 - 681
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| |||||| |||||    
T  742 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagatta 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 26887 - 26834
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  26887 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 26834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 36024 - 36077
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  36024 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 36077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 36944 - 36891
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  36944 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 36891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 671 - 755
Alignment:
Q  39 tttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattga 123  Q
    |||||| ||| ||||||  |||||||| |||||||||||||||||||| |||||| ||||| |||||| |||||  |||||||||    
T  671 tttgacctttaagttgaatcttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattga 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 18941 - 18985
Alignment:
Q  34 gtgattttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  18941 gtgattttgacttttgagttgaaccttagatgcttttgagtgcct 18985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 15462 - 15558
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||||| ||||| |||||| |||||| ||||||||| |||||||||||| ||||||| |||| | ||||| |||||| | |||  ||||||||||    
T  15462 gatttcgtaattttaacttttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaa 15558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 179138 - 179085
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||| | ||||||||||||||||||  ||||||||| |||| ||||||||||    
T  179138 gatttcataattttgacttttgagttggaccttagatgtttttcagtgcctgaa 179085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 891 - 953
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||| ||| ||| ||||||    
T  891 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagattaa 953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 1967 - 1905
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  1967 attttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 1905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 7102 - 7024
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaaga 106  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||||||||||| ||||||| |||| | ||||| ||||||    
T  7102 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaaga 7024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 14482 - 14404
Alignment:
Q  28 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaaga 106  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||||||||||| ||||||| |||| | ||||| ||||||    
T  14482 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaaga 14404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 3315 - 3253
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  3315 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattaa 3253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 6981 - 6919
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  6981 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattaa 6919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 13234 - 13172
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  13234 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattaa 13172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1992 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1992
Description:

Target: scaffold1992; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 280 - 239
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgctttt 70  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  280 atttcgtgatttagacttttgagttgatccttagatgctttt 239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 6058 - 5997
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  6058 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 5997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 7253 - 7192
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  7253 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagatta 7192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 44527 - 44486
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  44527 attttgacttttgagttgaaccttagatgcttttgagtgcct 44486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 46370 - 46431
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  46370 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagatta 46431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 6059 - 6099
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  6059 ttttgacttttgagttgaaccttagatgcttttgagtgcct 6099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 43436 - 43512
Alignment:
Q  48 tgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| | |||||  ||||| | |||  ||||||||||    
T  43436 tgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaa 43512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 47356 - 47432
Alignment:
Q  48 tgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| | |||||  ||||| | |||  ||||||||||    
T  47356 tgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaa 47432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 21449 - 21492
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||||||||||||| ||||||||| |||||||||||||||    
T  21449 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 21492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 29341 - 29384
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||||||||||||| ||||||||| |||||||||||||||    
T  29341 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 29384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 2300 - 2241
Alignment:
Q  40 ttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||| |||||||||||||| ||||||| || |||| |||||| |||||    
T  2300 ttgacttttgagttgaaccttagatgcttttaagtgccttaagatgtttaataaagatta 2241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 9982 - 9923
Alignment:
Q  40 ttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||||||||||| |||||||||||||| ||||||| || |||| |||||| |||||    
T  9982 ttgacttttgagttgaaccttagatgcttttaagtgccttaagatgtttaataaagatta 9923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 190905 - 190964
Alignment:
Q  19 agcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||  ||| |||||||||||||||| | ||||||||| ||||||||||||    
T  190905 agcatgcaagattctgtgtttttgacttttgagttcaaccttagatgtttttgagtgcct 190964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 192608 - 192667
Alignment:
Q  19 agcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||  ||| |||||||||||||||| | ||||||||| ||||||||||||    
T  192608 agcatgcaagattctgtgtttttgacttttgagttcaaccttagatgtttttgagtgcct 192667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 14971 - 15003
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||| ||||||||||||||||||    
T  14971 gacttttgagttgaaccttagatgcttttgagt 15003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 19493 - 19525
Alignment:
Q  42 gacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||| ||||||||||||||||||    
T  19493 gacttttgagttgaaccttagatgcttttgagt 19525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 2352 - 2290
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||| |||||||||| |||||||||||||||||||||| || |||| || ||| ||||||    
T  2352 ttttgacctttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaaagattaa 2290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 4904 - 4842
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| ||||| |||||||||||||||| || |||| || ||| |||||    
T  4904 attttgacttttgagttgaaccttaaatgcttttgagtgcctaaagatgtttattaaagatta 4842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 1726 - 1788
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    |||||||| |||||||||| |||||||||||||||||||||| || |||| || ||| |||||    
T  1726 attttgacctttgagttgaaccttagatgcttttgagtgccttaagatgtgtattaaagatta 1788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 10464 - 10526
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| ||||||||| |||||||||| |||| ||| ||| ||| ||||||    
T  10464 ttttgacttttgagttgaaccttagatgtttttgagtgcttgaagatgcctattaaagattaa 10526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 15322 - 15384
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||| ||||||||||||| ||||||||| |||||||||| | || ||||||| ||| ||||||    
T  15322 tttttacttttgagttgaaccttagatgtttttgagtgcttaaagatgtctattaaagattaa 15384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 35163 - 35225
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||||||||||||||| |||||||||||||||||| |||  | |||| |||||| |||||    
T  35163 attttgacttttgagttgaaccttagatgcttttgagtacctttagatgtataataaagatta 35225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 18716 - 18654
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||||||||||||||||| ||||||||| |||||||||||| || |||| || ||| ||||||    
T  18716 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagattaa 18654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 867 - 830
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  867 attttgacttttgagttgaaccttagatgcttttgagt 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 2262 - 2217
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||||    
T  2262 atttcgtaatttggacttttgagttgaaccttagatgcttttgagt 2217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 792 - 747
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||||    
T  792 atttcgtaatttggacttttgagttgaaccttagatgcttttgagt 747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 5765 - 5850
Alignment:
Q  39 tttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||| ||| ||||||  |||||||| |||||||| ||||||||||| |||||| ||||| |||| | |||||  ||||||||||    
T  5765 tttgacctttaagttgaatcttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaa 5850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 45579 - 45534
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||||    
T  45579 atttcgtaatttggacttttgagttgaaccttagatgcttttgagt 45534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 10956 - 10992
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  10956 ttttgacttttgagttgaaccttagatgcctttgagt 10992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 38473 - 38509
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  38473 ttttgacttttgagttgaaccttagatgcctttgagt 38509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 805 - 769
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||||||||||||    
T  805 ttttgacttttgagttgaaccttagatgcttttgagt 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 5943 - 5995
Alignment:
Q  29 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||| |||||||||| | |||||||| ||||||||| |||||||||||||||    
T  5943 atttcatgattttgacctgtgagttgaaccttagatgtttttgagtgcctgaa 5995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 15877 - 15837
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  15877 ttttgacttttgagttgaaccttagatgtttttgagtgcct 15837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 6721 - 6761
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  6721 ttttgacttttgagttgaaccttagatgtttttgagtgcct 6761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 16740 - 16804
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||| |  |||  ||| ||||||||||||||||||  |||||||||||||||||||||    
T  16740 cagagagcatgtagaattctgtgtttttgacttttgagttgaagcttagatgcttttgagtgcct 16804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 8506 - 8617
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    ||||||||||||  |||||| || |||| ||||||| |||||  |||||  ||| ||||||||| |||||||  ||| ||| ||||| | | ||||||||    
T  8506 gcagagagcatgttagattttgtaatttcgactttttagttggaccttaagtgcctttgagtgcgtgaacatacctagtaatgattagggatgaatgtag 8605  T
Q  113 gatgagattgaa 124  Q
    ||| ||||||||    
T  8606 gataagattgaa 8617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 10987 - 10939
Alignment:
Q  58 cttagatgcttttgagtgcctgaacatgtctaataacgattaagaaaga 106  Q
    |||||||| |||||||||||||||||||| |||||| ||||| ||||||    
T  10987 cttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaaga 10939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 3505 - 3616
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    ||||||||||||  |||||| || |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| | | ||||||||    
T  3505 gcagagagcatgttagattttgtaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattagggatgaatgtag 3604  T
Q  113 gatgagattgaa 124  Q
    ||| ||||||||    
T  3605 gatcagattgaa 3616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 14169 - 14280
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  14169 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14268  T
Q  113 gatgagattgaa 124  Q
    ||  ||||||||    
T  14269 gacaagattgaa 14280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 27299 - 27256
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaa 81  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||    
T  27299 tttttacttttgagttgaaccttagatgtttttgagtgcctgaa 27256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 2344 - 2246
Alignment:
Q  26 aagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtaggatgagattgaa 124  Q
    |||||||||  ||| | |||||| ||| || ||||||||| ||||||||||||||| |||   | ||| ||||| |||||| ||||| |||||||||||    
T  2344 aagatttcggaattataactttttagtggaaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaa 2246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 633 - 595
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgc 76  Q
    |||||||||||||||||| || |||||||||||||||||    
T  633 ttttgacttttgagttgaaccctagatgcttttgagtgc 595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 36759 - 36721
Alignment:
Q  36 gattttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  36759 gattttgacttttgagttgaaccttagatgcctttgagt 36721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 8576 - 8662
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||||| || |||  ||  ||||||| |||||||||| ||||||||| |||||||| |||||| ||| ||| ||| ||||||    
T  8576 cagagagcatgtaaaattcggtatttttgacctttgagttgaaccttagatgtttttgagtccctgaagatgcctattaaagattaa 8662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 15992 - 16054
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    |||| ||||||||||||| ||||||||| |||||||||||| || |||| || ||| ||||||    
T  15992 tttttacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaaagattaa 16054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 2088 - 2125
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  2088 attttgacttttgcgttgaaccttagatgcttttgagt 2125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 9948 - 9985
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  9948 attttgacttttgcgttgaaccttagatgcttttgagt 9985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 6923 - 6960
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagt 74  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  6923 attttgactttcgagttgaaccttagatgcttttgagt 6960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 18095 - 18136
Alignment:
Q  37 attttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||    
T  18095 attttgactttagagttgaaccttagatgtttttgagtgcct 18136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 32901 - 32848
Alignment:
Q  47 ttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaa 100  Q
    ||||||||| ||||||||| ||||||||||||||| ||| ||| ||| ||||||    
T  32901 ttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagattaa 32848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 381 - 345
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  381 ttttgacttttgagttgaaccttagatgcctttgagt 345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 1143 - 1183
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  1143 ttttgacttgtgagttgaactttagatgcttttgagtgcct 1183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 6579 - 6543
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  6579 ttttgacttttgagttgaaccttagatgtttttgagt 6543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 2351 - 2315
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  2351 ttttgacttttgagttgaaccttagatgcctttgagt 2315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 9346 - 9382
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  9346 ttttgacttttgagttgaaccttagatgcctttgagt 9382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 15795 - 15759
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  15795 ttttgacttttgagttgaaccttagatgcctttgagt 15759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 18014 - 18050
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  18014 ttttgacttttgagttgaaccttagatgcctttgagt 18050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 12205 - 12169
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  12205 ttttgacttttgagttgaaccttagatgcctttgagt 12169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 18806 - 18770
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  18806 ttttgacttttgagttgaaccttagatgcctttgagt 18770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 15147 - 15107
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagtgcct 78  Q
    |||| ||||||||||||| ||||||||| ||||||||||||    
T  15147 tttttacttttgagttgaaccttagatgtttttgagtgcct 15107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 37184 - 37084
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataacgattaagaaagaatgtag 112  Q
    |||||||||||| ||||||| | ||||| ||||||| |||||  ||||   ||| |||||||||||||||||  ||| ||| ||||| | | ||||||||    
T  37184 gcagagagcatgtaagattttgcgatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattagggatgaatgtag 37085  T
Q  113 g 113  Q
    |    
T  37084 g 37084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 66069 - 66105
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  66069 ttttgacttttgagttgaaccttagatgcctttgagt 66105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 71210 - 71246
Alignment:
Q  38 ttttgacttttgagttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| |||||||||| |||||||    
T  71210 ttttgacttttgagttgaaccttagatgcctttgagt 71246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 80796 - 80756
Alignment:
Q  59 ttagatgcttttgagtgcctgaacatgtctaataacgatta 99  Q
    ||||||| |||||||||||||||||||| |||||| |||||    
T  80796 ttagatgattttgagtgcctgaacatgtataataatgatta 80756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University