View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1433_low_69 (Length: 243)
Name: NF1433_low_69
Description: NF1433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1433_low_69 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 39594228 - 39594458
Alignment:
| Q |
11 |
taatattcacttttttattgagtgaattcaatgtaggtcttataatttatgtgagatccatttttggagtgaaggacctaataaatttaattcaataaga |
110 |
Q |
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| T |
39594228 |
taatattcacttttttattgagtaaattcaacgtagctctta--atttatgtgagatccattttcggagtgaagaacctaataaatttaattcaataaga |
39594325 |
T |
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| Q |
111 |
aagtcatgttagaaactcttcatgtgttgcaaattatgaaacaaatgtctcatataaataatgtattatcttataattttaaatatatcaaataaacatg |
210 |
Q |
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| T |
39594326 |
aagtcatgttagaaactcttcatgtgttgcaaattatgaaacaaacgtctcatataaataatgtattatcttataattttaaatatatcaaataaacatg |
39594425 |
T |
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| Q |
211 |
tcgaagtgtactctagtaattaaaatatgggaa |
243 |
Q |
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| T |
39594426 |
tcgaagtgtactctagtaattaaaatatgggaa |
39594458 |
T |
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