View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14340_high_9 (Length: 418)
Name: NF14340_high_9
Description: NF14340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14340_high_9 |
 |  |
|
| [»] scaffold0155 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 345; Significance: 0; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 18 - 402
Target Start/End: Complemental strand, 8834431 - 8834047
Alignment:
| Q |
18 |
acaaaatgagtcaatattcttctatcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcat |
117 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
8834431 |
acaaaatgagtcaatattcttctctcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatgtagatgtcat |
8834332 |
T |
 |
| Q |
118 |
ttgcagagaagcctccgatcattcatattgtttaaatcttctaaactcaaagcgaggtgtagatcttgtgaaccttgcacaatacacaattgatgtgctc |
217 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8834331 |
ttgcagagaatcctccgatcattcatattgttcaaatcttctcaactcaaagcgaggtgtagatcttgtgaaccttgcacaatacacaattgatgtgctc |
8834232 |
T |
 |
| Q |
218 |
aataaaaattggacccacgcatatgacctaatcagggacatgactgaaattgctgagaatgataccgtagcaggctattacgatcgttgtgcaaccgatt |
317 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8834231 |
aataacaattggacccacgcatatgacctaatcagggacatgactgaaattgctgagaatgataccgtagcaggctattacgatcgttgtgcaaccgatt |
8834132 |
T |
 |
| Q |
318 |
tttcggatactaatagtatcgctattagccttagggatgcaaattcaaatttaaacattggtaagtatccggccatggtcaaaga |
402 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
8834131 |
tttcggatactaatagtatagctattagccttagggatgcaaaatcaaatttaaacattggtatgtatccggccatggttaaaga |
8834047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 17 - 402
Target Start/End: Complemental strand, 8830722 - 8830337
Alignment:
| Q |
17 |
tacaaaatgagtcaatattcttctatcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtca |
116 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
8830722 |
tacaaaatgagtcaatattcttctctcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatgtagatctca |
8830623 |
T |
 |
| Q |
117 |
tttgcagagaagcctccgatcattcatattgtttaaatcttctaaactcaaagcgaggtgtagatcttgtgaaccttgcacaatacacaattgatgtgct |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8830622 |
tttgcagagaagcctccgatcattcatattgttcaaatcttctaaactcaaagcgaggtgtagatcttgtgaaccttgcacaatacacaattgatgtgct |
8830523 |
T |
 |
| Q |
217 |
caataaaaattggacccacgcatatgacctaatcagggacatgactgaaattgctgagaatgataccgtagcaggctattacgatcgttgtgcaaccgat |
316 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8830522 |
caataacaattggacccacgcatatgacctaatcagggacatgactgaaattgctgagaatgataccgtagcaggctattacgatcgttgtgaaaccgat |
8830423 |
T |
 |
| Q |
317 |
ttttcggatactaatagtatcgctattagccttagggatgcaaattcaaatttaaacattggtaagtatccggccatggtcaaaga |
402 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8830422 |
tttttggatactaatagtatcgcctttagccttagggatgcagaatcaaatttaaacattggtaagtatccggccatggttaaaga |
8830337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 8647667 - 8647422
Alignment:
| Q |
18 |
acaaaatgagtcaatattcttctatcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcat |
117 |
Q |
| |
|
|||||||||||||||| | ||| |||||||| ||||| || ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
8647667 |
acaaaatgagtcaatacttctctctcttgttgatgctttttgttctatgtgttgcttcctccaattcaatttcagccaaagttgttgatgtagatgtcat |
8647568 |
T |
 |
| Q |
118 |
ttgcagagaagcctccgatcattcatattgtttaaatcttctaaactcaaagc------------gaggtgtagatcttgtgaaccttgcacaatacaca |
205 |
Q |
| |
|
|||||||||||||||| ||| | ||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||| |||||||| |
|
|
| T |
8647567 |
ttgcagagaagcctccaatcctacatattgttcaaatcttctcaactcaaagcaaggaggtgcaaaaggtgtagatcttgtcgaccttgcagaatacaca |
8647468 |
T |
 |
| Q |
206 |
attgatgtgctcaataaaaattggacccacgcatatgacctaatca |
251 |
Q |
| |
|
||||||||||| | | | ||||||||| || ||||| ||||||||| |
|
|
| T |
8647467 |
attgatgtgcttagtgagaattggaccaacacatataacctaatca |
8647422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 387
Target Start/End: Original strand, 8842974 - 8843358
Alignment:
| Q |
18 |
acaaaatgagtcaatattcttctatcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcat |
117 |
Q |
| |
|
|||||||||||| ||| | ||| |||||||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||| |||| |
|
|
| T |
8842974 |
acaaaatgagtcgatacttctctctcttgttggtgctttttattctatgtgttgcttcctccaattcaatttcagctaaagttgttgatgtagatatcat |
8843073 |
T |
 |
| Q |
118 |
ttgcagagaagcctccgatcattcatattgtttaaatcttctaaactcaaag------------cgaggtgtagatcttgtgaaccttgcacaatacaca |
205 |
Q |
| |
|
||||| |||||||||| ||| | | ||||||| ||||||||| ||||||||| ||||||||||||||| | ||||||||||||||| |
|
|
| T |
8843074 |
ttgcaaagaagcctccaatcctacgtattgttcaaatcttctcaactcaaagtcaggaggagcaaaaggtgtagatcttgttgatcttgcacaatacaca |
8843173 |
T |
 |
| Q |
206 |
attgatgtgctcaataaaaattggacccacgcatatgacctaatcagggacatgactgaaattgctgagaatgataccgtagcaggctattacgatcgtt |
305 |
Q |
| |
|
||||||||||| ||| | |||| | ||| ||||| ||||||||| | | || ||| || |||||||| |||||||| |||||| ||||||| |||||| |
|
|
| T |
8843174 |
attgatgtgcttaatgacaattcgtcccgcgcatttgacctaatgaagaacttgatggatattgctgaaaatgatacggtagcaagctattattatcgtt |
8843273 |
T |
 |
| Q |
306 |
gtgcaaccgatttttcggatact---aatagtatcgctatt-agccttagggatgcaaattcaaatttaaacattggtaagtatcc |
387 |
Q |
| |
|
||| | ||||||| ||||||| || |||||| |||| || |||||||||||| | | ||||||| ||| |||||||||||| |
|
|
| T |
8843274 |
gtgattcagattttttggatactgaaaacagtatc-ttattaaggcttagggatgcagaattaaatttacacaatggtaagtatcc |
8843358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 8507908 - 8507758
Alignment:
| Q |
18 |
acaaaatgagtcaatattcttctatcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcat |
117 |
Q |
| |
|
|||||||||||||||||| ||| ||| |||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
8507908 |
acaaaatgagtcaatatttctctctctacttggtgattcttattctatgtgttgcttcctccaattcaatttcagccaaagttgttgatgtagatgtcat |
8507809 |
T |
 |
| Q |
118 |
ttgcagagaagcctccgatcattcatattgtttaaatcttctaaactcaaa |
168 |
Q |
| |
|
||||| |||||||||| ||| ||||| ||||| ||||||||| |||||||| |
|
|
| T |
8507808 |
ttgcaaagaagcctccaatccttcattttgttcaaatcttctcaactcaaa |
8507758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 5082685 - 5082837
Alignment:
| Q |
18 |
acaaaatgagtcaatattcttctatcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcat |
117 |
Q |
| |
|
|||||||||||||| | || ||| |||||||||||||| || |||| ||||| | |||||||||||| |||||||||||||| ||||| | |||||||| |
|
|
| T |
5082685 |
acaaaatgagtcaagactcctctctcttgttggtgctttttgttctctgtgtaacttcctccaattcaatttcagccaaagttattgatgttgatgtcat |
5082784 |
T |
 |
| Q |
118 |
ttgcagagaagcctccgatcattcatattgtttaaatcttctaaactcaaagc |
170 |
Q |
| |
|
||||| |||||||||| |||| |||||||||| ||||||||| |||||||||| |
|
|
| T |
5082785 |
ttgcaaagaagcctccaatcaatcatattgttcaaatcttctcaactcaaagc |
5082837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 8548691 - 8548819
Alignment:
| Q |
42 |
tcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcatttgcagagaagcctccgatcattc |
141 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||| |||| ||||| ||| ||| ||| |
|
|
| T |
8548691 |
tcttgttagtgcttcttattctatgtgttgcttccttcaattcaatttcagccaaagttgttgatgtagatgtcatctgcaatgaagcttccaatccttc |
8548790 |
T |
 |
| Q |
142 |
atattgtttaaatcttctaaactcaaagc |
170 |
Q |
| |
|
|||||||| ||||||| |||||||||| |
|
|
| T |
8548791 |
atattgttcgtatcttctcaactcaaagc |
8548819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 216
Target Start/End: Original strand, 8514349 - 8514544
Alignment:
| Q |
33 |
attcttctatcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcatttgcagagaagcctc |
132 |
Q |
| |
|
|||| ||| ||||| |||||||||||||||||||| |||| |||||||||||| |||||||| |||||||||| ||||| ||||||||| ||||||||| |
|
|
| T |
8514349 |
attcctctctcttgctggtgcttcttattctatgttttgcttcctccaattcaatttcagccgaagttgttgacgtagatatcatttgcaaagaagcctc |
8514448 |
T |
 |
| Q |
133 |
cgatcattcatattgtttaaatcttctaaactcaaagc------------gaggtgtagatcttgtgaaccttgcacaatacacaattgatgtgct |
216 |
Q |
| |
|
|||| || ||||| | ||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8514449 |
taatcaatcgtattgctcaaatcttctcaactcgaagccaggaggtgcaaaaggtgtagatcttgttgaccttgcacaatacacaattgatgtgct |
8514544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 8527230 - 8527427
Alignment:
| Q |
42 |
tcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcatttgcagagaagcctccgatcattc |
141 |
Q |
| |
|
|||||||||||||| | |||||||||||||| |||||||||||| | |||||||||||||||||| | ||| ||||||||| |||||| ||| ||| ||| |
|
|
| T |
8527230 |
tcttgttggtgcttttgattctatgtgttgcttcctccaattcaatctcagccaaagttgttgatgtggatatcatttgcaaagaagcatccaatccttc |
8527329 |
T |
 |
| Q |
142 |
atattgtttaaatcttctaaactcaaagc------------gaggtgtagatcttgtgaaccttgcacaatacacaattgatgtgctcaataaaaatt |
227 |
Q |
| |
|
||||| | ||||||||| || || |||| ||||||||||||||| ||||||||| |||||||||||||||||| ||||| |||| |
|
|
| T |
8527330 |
gtattgctcaaatcttctcaattcgaagccaggaggtgcaaaaggtgtagatcttgtcgaccttgcacgatacacaattgatgtgcttaataataatt |
8527427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 8541259 - 8541062
Alignment:
| Q |
42 |
tcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcatttgcagagaagcctccgatcattc |
141 |
Q |
| |
|
|||||||||||||| | |||||||||||||| |||||||||||| | |||||||||||||||||| | ||| ||||||||| |||||| ||| ||| ||| |
|
|
| T |
8541259 |
tcttgttggtgcttttgattctatgtgttgcttcctccaattcaatctcagccaaagttgttgatgtggatatcatttgcaaagaagcatccaatccttc |
8541160 |
T |
 |
| Q |
142 |
atattgtttaaatcttctaaactcaaagc------------gaggtgtagatcttgtgaaccttgcacaatacacaattgatgtgctcaataaaaatt |
227 |
Q |
| |
|
||||| | ||||||||| || || |||| ||||||||||||||| ||||||||| |||||||||||||||||| ||||| |||| |
|
|
| T |
8541159 |
gtattgctcaaatcttctcaattcgaagccaggaggtgcaaaaggtgtagatcttgtcgaccttgcacgatacacaattgatgtgcttaataataatt |
8541062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 8625628 - 8625512
Alignment:
| Q |
54 |
ttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcatttgcagagaagcctccgatcattcatattgtttaaa |
153 |
Q |
| |
|
|||||||||||| ||||| |||| ||||||| |||||||||||||||||||| |||||||||| |||| ||||| ||| ||| ||||||||||| | | |
|
|
| T |
8625628 |
ttcttattctatttgttgtttccttcaattcaatttcagccaaagttgttgatgtagatgtcatctgcaatgaagcttccaatccttcatattgttcata |
8625529 |
T |
 |
| Q |
154 |
tcttctaaactcaaagc |
170 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
8625528 |
tcttctcaactcaaagc |
8625512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 58 - 170
Target Start/End: Original strand, 8627385 - 8627489
Alignment:
| Q |
58 |
tattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcatttgcagagaagcctccgatcattcatattgtttaaatctt |
157 |
Q |
| |
|
||||||||||||||| |||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||||| ||||||| |
|
|
| T |
8627385 |
tattctatgtgttgcttcctccaattcaatttcagccaaagttattgatgtagatgtcatttgcagaga--------atccttcatattgttcaaatctt |
8627476 |
T |
 |
| Q |
158 |
ctaaactcaaagc |
170 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
8627477 |
ctcaactcaaagc |
8627489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 8632100 - 8632059
Alignment:
| Q |
175 |
tgtagatcttgtgaaccttgcacaatacacaattgatgtgct |
216 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
8632100 |
tgtagatattgttgaccttgcacaatacacaattgatgtgct |
8632059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0155 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0155
Description:
Target: scaffold0155; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 170
Target Start/End: Complemental strand, 26273 - 26121
Alignment:
| Q |
18 |
acaaaatgagtcaatattcttctatcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcat |
117 |
Q |
| |
|
|||||||||||||||| || ||| ||||||| ||| || ||||||||||| || | |||||||||||| |||||||||||||||||||| ||||||| || |
|
|
| T |
26273 |
acaaaatgagtcaatactcctctctcttgttagtgtttgttattctatgtttttcttcctccaattcaatttcagccaaagttgttgatgtagatgttat |
26174 |
T |
 |
| Q |
118 |
ttgcagagaagcctccgatcattcatattgtttaaatcttctaaactcaaagc |
170 |
Q |
| |
|
||||| |||||| ||| ||| ||||||||||| |||||| || |||||||||| |
|
|
| T |
26173 |
ttgcaaagaagcatccaatccttcatattgttcaaatctcctcaactcaaagc |
26121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0155; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 23 - 231
Target Start/End: Original strand, 34214 - 34434
Alignment:
| Q |
23 |
atgagtcaatattcttctatcttgttggtgcttcttattctatgtgttgcctcctccaattcagtttcagccaaagttgttgatctagatgtcatttgca |
122 |
Q |
| |
|
||||| ||||| || ||| ||||||||| |||| |||||||| ||||| ||||| || ||| | || ||||||||||||| || | |||||||| | |
|
|
| T |
34214 |
atgaggcaatactcctctctcttgttggggctttttattctacatgttgtttcctctaaatcaatatccaccaaagttgttgaagtaaaagtcatttgta |
34313 |
T |
 |
| Q |
123 |
gagaagcctccgatcattcatattgtttaaatcttctaaactcaaagcgagg------------tgtagatcttgtgaaccttgcacaatacacaattga |
210 |
Q |
| |
|
||||||| || ||| ||||||||| ||||||||||| |||||||| | ||| |||||||||||| ||||||||| | ||||||||||| |
|
|
| T |
34314 |
aagaagcccccaatccttcatattgcttaaatcttctcaactcaaaaccaggacgagtaaaaggtgtagatcttgttaaccttgcagagtacacaattga |
34413 |
T |
 |
| Q |
211 |
tgtgctcaataaaaattggac |
231 |
Q |
| |
|
|||||||||| | |||||||| |
|
|
| T |
34414 |
tgtgctcaatgacaattggac |
34434 |
T |
 |
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Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 4538660 - 4538737
Alignment:
| Q |
93 |
ccaaagttgttgatctagatgtcatttgcagagaagcctccgatcattcatattgtttaaatcttctaaactcaaagc |
170 |
Q |
| |
|
|||||||| ||||| | ||||||||||||| |||||||||| |||| |||||||||| ||||||||| |||||||||| |
|
|
| T |
4538660 |
ccaaagttattgatgttgatgtcatttgcaaagaagcctccaatcaatcatattgttcaaatcttctcaactcaaagc |
4538737 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 10779955 - 10779859
Alignment:
| Q |
74 |
tcctccaattcagtttcagccaaagttgttgatctagatgtcatttgcagagaagcctccgatcattcatattgtttaaatcttctaaactcaaagc |
170 |
Q |
| |
|
|||||||| |||||||| | |||||||| || || |||||||||||| ||||||||| ||| ||||||||| ||||||||||| |||||||||| |
|
|
| T |
10779955 |
tcctccaaatcagtttccactaaagttgtcgaagtaaatgtcatttgcaaagaagcctcaaatccttcatattgcttaaatcttctcaactcaaagc |
10779859 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 10973564 - 10973468
Alignment:
| Q |
74 |
tcctccaattcagtttcagccaaagttgttgatctagatgtcatttgcagagaagcctccgatcattcatattgtttaaatcttctaaactcaaagc |
170 |
Q |
| |
|
|||||||| |||||||| | |||||||| || || |||||||||||| ||||||||| ||| ||||||||| ||||||||||| |||||||||| |
|
|
| T |
10973564 |
tcctccaaatcagtttccactaaagttgtcgaagtaaatgtcatttgcaaagaagcctcaaatccttcatattgcttaaatcttctcaactcaaagc |
10973468 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 10782210 - 10782165
Alignment:
| Q |
124 |
agaagcctccgatcattcatattgtttaaatcttctaaactcaaag |
169 |
Q |
| |
|
|||||||||| ||| ||||||||| ||||||||||| ||||||||| |
|
|
| T |
10782210 |
agaagcctccaatccttcatattgcttaaatcttctcaactcaaag |
10782165 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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