View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14340_low_29 (Length: 262)
Name: NF14340_low_29
Description: NF14340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14340_low_29 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 13831389 - 13831159
Alignment:
| Q |
13 |
cagataatttaaataattatatagacataactaagtttagaaagagattcaaataaaaatcgagagactctcaaatgacaacaaaaaatatctattcgtg |
112 |
Q |
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| T |
13831389 |
cagataatttaaataattatatagacataactaagtttagaaagagattgaaataaaaatcgaga--ctctcaaatgacaacaaaaaatatctattcgtg |
13831292 |
T |
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| Q |
113 |
cgtttgcgacgaatgttctctttactttagctttgtcctttatttacacgagtatcacttgttaaattggattagtttaactcataaagtaatatgatca |
212 |
Q |
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| T |
13831291 |
cgtttgcgacgaatgttctctttactttagctttgtcctttatttacacgattatcacttgttaaattggattagtttaactcataaagtaatatgatca |
13831192 |
T |
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| Q |
213 |
tcagttaatcacggaagacaaatcgataagcat |
245 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
13831191 |
tcagttaatcacggaagacaaatcgataagcat |
13831159 |
T |
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