View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14340_low_30 (Length: 259)
Name: NF14340_low_30
Description: NF14340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14340_low_30 |
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Alignment Details
Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 35685784 - 35685915
Alignment:
| Q |
5 |
atgaatgcaaaacggtacaagtgatgggcttcaatcaatcttgtgtgaaaaatgaagtnnnnnnnnnnnnngttgcctttgacataaacacagcaacaaa |
104 |
Q |
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| T |
35685784 |
atgaatgcaaaacggtacaagtgatgggcttcaatcaatcttgtgtgaaaactgaagtaaaaagaaaaaatgttgcctttgacataaacgcaacaacaaa |
35685883 |
T |
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| Q |
105 |
aatcaatcataatgaaagaaattggatgatca |
136 |
Q |
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| T |
35685884 |
aatcaatcataatgcaagaaattggatgatca |
35685915 |
T |
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