View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14340_low_35 (Length: 225)

Name: NF14340_low_35
Description: NF14340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14340_low_35
NF14340_low_35
[»] chr1 (32 HSPs)
chr1 (17-203)||(27094194-27094383)
chr1 (32-124)||(16182229-16182321)
chr1 (32-112)||(42735912-42735992)
chr1 (32-103)||(52431855-52431925)
chr1 (39-113)||(18512533-18512607)
chr1 (32-113)||(36313938-36314018)
chr1 (32-113)||(37662515-37662596)
chr1 (69-113)||(12613245-12613289)
chr1 (34-113)||(8741506-8741585)
chr1 (32-113)||(4865780-4865861)
chr1 (32-124)||(1604171-1604263)
chr1 (32-104)||(7180581-7180653)
chr1 (32-104)||(23233982-23234054)
chr1 (32-104)||(35605590-35605662)
chr1 (34-98)||(45518358-45518422)
chr1 (34-113)||(27579432-27579511)
chr1 (75-113)||(13763835-13763873)
chr1 (39-113)||(18911889-18911963)
chr1 (75-113)||(45180480-45180518)
chr1 (35-113)||(51137818-51137895)
chr1 (32-113)||(7191063-7191144)
chr1 (32-113)||(11344469-11344550)
chr1 (32-113)||(11502489-11502570)
chr1 (32-113)||(21265687-21265768)
chr1 (32-113)||(33033157-33033238)
chr1 (32-124)||(1195229-1195321)
chr1 (69-113)||(4553504-4553548)
chr1 (69-113)||(5430997-5431041)
chr1 (32-104)||(11333695-11333766)
chr1 (32-104)||(11491716-11491787)
chr1 (32-104)||(36860629-36860701)
chr1 (34-106)||(41998381-41998453)
[»] chr2 (28 HSPs)
chr2 (39-124)||(18254627-18254712)
chr2 (56-113)||(15939344-15939401)
chr2 (32-113)||(39635331-39635412)
chr2 (39-113)||(5947904-5947978)
chr2 (39-113)||(32854570-32854644)
chr2 (32-113)||(8250259-8250340)
chr2 (68-109)||(38533615-38533656)
chr2 (32-124)||(28194663-28194755)
chr2 (42-106)||(36748927-36748991)
chr2 (56-104)||(44898449-44898497)
chr2 (39-105)||(10463160-10463229)
chr2 (53-100)||(13424056-13424103)
chr2 (54-113)||(32857905-32857964)
chr2 (39-105)||(7717571-7717637)
chr2 (39-113)||(23984181-23984255)
chr2 (68-102)||(38534138-38534172)
chr2 (32-113)||(3596281-3596361)
chr2 (32-113)||(5612985-5613066)
chr2 (56-113)||(6973407-6973463)
chr2 (69-106)||(20497160-20497197)
chr2 (32-113)||(33228891-33228972)
chr2 (35-96)||(42998827-42998888)
chr2 (53-113)||(7907501-7907561)
chr2 (41-113)||(14518324-14518396)
chr2 (56-124)||(15795916-15795984)
chr2 (56-104)||(33549021-33549069)
chr2 (32-124)||(39408637-39408729)
chr2 (56-124)||(42756221-42756288)
[»] chr5 (37 HSPs)
chr5 (56-113)||(885116-885173)
chr5 (32-113)||(8241081-8241162)
chr5 (69-113)||(34434258-34434302)
chr5 (39-113)||(3740992-3741066)
chr5 (39-113)||(29499213-29499287)
chr5 (69-118)||(4418295-4418344)
chr5 (53-113)||(33372960-33373019)
chr5 (69-124)||(7545345-7545400)
chr5 (69-123)||(14970347-14970401)
chr5 (56-113)||(5195103-5195160)
chr5 (32-113)||(6734697-6734777)
chr5 (32-105)||(17693153-17693224)
chr5 (35-124)||(36564369-36564458)
chr5 (69-113)||(6167280-6167324)
chr5 (69-113)||(7443407-7443451)
chr5 (32-104)||(16745112-16745184)
chr5 (32-104)||(34729977-34730049)
chr5 (32-124)||(42320348-42320440)
chr5 (34-113)||(15241110-15241187)
chr5 (39-113)||(17891816-17891891)
chr5 (74-113)||(33383646-33383685)
chr5 (75-113)||(3821379-3821417)
chr5 (54-104)||(8752515-8752565)
chr5 (39-113)||(22228920-22228994)
chr5 (39-113)||(23937891-23937965)
chr5 (56-113)||(25460738-25460796)
chr5 (54-100)||(39804417-39804463)
chr5 (39-113)||(41930143-41930217)
chr5 (32-105)||(6234761-6234833)
chr5 (72-113)||(16819263-16819304)
chr5 (32-113)||(39799988-39800069)
chr5 (32-124)||(546833-546925)
chr5 (32-104)||(6558832-6558904)
chr5 (32-104)||(18928751-18928823)
chr5 (32-104)||(20707754-20707826)
chr5 (32-112)||(24456220-24456298)
chr5 (56-104)||(30872342-30872390)
[»] chr3 (42 HSPs)
chr3 (32-113)||(25883946-25884027)
chr3 (39-113)||(15085642-15085716)
chr3 (39-113)||(27329890-27329964)
chr3 (39-113)||(41253707-41253781)
chr3 (39-113)||(44625183-44625257)
chr3 (39-113)||(51879133-51879207)
chr3 (68-113)||(4808003-4808048)
chr3 (32-113)||(23653175-23653255)
chr3 (32-112)||(14795142-14795222)
chr3 (57-113)||(36472389-36472445)
chr3 (69-113)||(41710651-41710695)
chr3 (32-110)||(26880208-26880285)
chr3 (39-113)||(49028901-49028975)
chr3 (69-106)||(8488495-8488532)
chr3 (57-106)||(9114067-9114116)
chr3 (52-113)||(32429798-32429859)
chr3 (32-113)||(35849512-35849592)
chr3 (75-124)||(39709112-39709161)
chr3 (56-113)||(48546228-48546285)
chr3 (32-113)||(49443382-49443462)
chr3 (32-112)||(23090284-23090364)
chr3 (32-124)||(34102558-34102650)
chr3 (34-113)||(46336460-46336539)
chr3 (52-106)||(10828521-10828575)
chr3 (75-113)||(46767417-46767455)
chr3 (32-106)||(46844937-46845010)
chr3 (56-113)||(4860216-4860273)
chr3 (56-113)||(4880224-4880281)
chr3 (61-110)||(16991896-16991945)
chr3 (39-124)||(19879239-19879324)
chr3 (39-113)||(34102104-34102180)
chr3 (32-113)||(39719966-39720047)
chr3 (32-113)||(41936365-41936446)
chr3 (32-113)||(47098763-47098844)
chr3 (32-113)||(53432695-53432776)
chr3 (53-113)||(8171674-8171734)
chr3 (32-104)||(26942784-26942856)
chr3 (32-120)||(31327669-31327757)
chr3 (32-104)||(31586978-31587050)
chr3 (73-113)||(36478146-36478186)
chr3 (69-113)||(40723618-40723662)
chr3 (55-111)||(51143497-51143552)
[»] chr8 (30 HSPs)
chr8 (32-106)||(13105122-13105196)
chr8 (32-113)||(5328525-5328606)
chr8 (39-124)||(33810678-33810763)
chr8 (69-113)||(26217859-26217903)
chr8 (39-113)||(34873124-34873198)
chr8 (39-113)||(36035137-36035211)
chr8 (39-113)||(37708729-37708803)
chr8 (32-113)||(13059135-13059216)
chr8 (32-113)||(14583228-14583309)
chr8 (32-113)||(17072521-17072602)
chr8 (32-113)||(17575669-17575750)
chr8 (52-113)||(21303429-21303490)
chr8 (56-113)||(31024349-31024406)
chr8 (52-113)||(41086665-41086726)
chr8 (56-113)||(44053398-44053455)
chr8 (32-112)||(30300360-30300440)
chr8 (39-106)||(8183358-8183425)
chr8 (39-113)||(9812999-9813073)
chr8 (57-103)||(36274430-36274475)
chr8 (39-109)||(38730517-38730587)
chr8 (32-113)||(94469-94550)
chr8 (32-113)||(2792810-2792891)
chr8 (52-113)||(10761870-10761931)
chr8 (73-114)||(14181299-14181340)
chr8 (56-113)||(21548455-21548512)
chr8 (32-113)||(34894400-34894481)
chr8 (32-113)||(37290953-37291034)
chr8 (69-113)||(11406637-11406681)
chr8 (32-100)||(12510406-12510474)
chr8 (69-113)||(40904599-40904643)
[»] chr7 (28 HSPs)
chr7 (34-113)||(11692421-11692502)
chr7 (32-115)||(10690878-10690961)
chr7 (39-113)||(46758280-46758354)
chr7 (32-113)||(1563697-1563778)
chr7 (32-113)||(3532609-3532690)
chr7 (34-114)||(42435177-42435257)
chr7 (56-104)||(43404941-43404989)
chr7 (35-106)||(10363385-10363455)
chr7 (39-106)||(27162260-27162327)
chr7 (32-113)||(28799978-28800060)
chr7 (32-113)||(37710116-37710197)
chr7 (56-113)||(18503438-18503495)
chr7 (56-113)||(20421717-20421774)
chr7 (32-124)||(29461762-29461854)
chr7 (39-124)||(32047127-32047212)
chr7 (32-113)||(47440768-47440849)
chr7 (56-103)||(42798285-42798332)
chr7 (39-106)||(46645747-46645814)
chr7 (56-106)||(10901700-10901750)
chr7 (39-113)||(13702063-13702137)
chr7 (65-111)||(35005465-35005511)
chr7 (32-110)||(36114303-36114380)
chr7 (32-104)||(12428221-12428294)
chr7 (71-104)||(21402795-21402828)
chr7 (32-113)||(30388465-30388546)
chr7 (84-113)||(38697268-38697297)
chr7 (83-116)||(40436392-40436425)
chr7 (77-113)||(4232561-4232597)
[»] chr4 (36 HSPs)
chr4 (32-106)||(50376615-50376688)
chr4 (39-113)||(30305837-30305911)
chr4 (39-113)||(36099141-36099215)
chr4 (32-113)||(624511-624592)
chr4 (32-113)||(8965125-8965206)
chr4 (32-113)||(10402472-10402553)
chr4 (32-104)||(11375856-11375928)
chr4 (26-103)||(5440517-5440594)
chr4 (32-113)||(29406388-29406468)
chr4 (32-113)||(37868525-37868606)
chr4 (32-113)||(47890726-47890807)
chr4 (56-104)||(7043939-7043987)
chr4 (70-113)||(4513398-4513441)
chr4 (74-113)||(16589372-16589411)
chr4 (34-113)||(23778783-23778862)
chr4 (66-97)||(39489851-39489882)
chr4 (73-123)||(2860680-2860730)
chr4 (39-113)||(23176680-23176753)
chr4 (39-113)||(28715728-28715802)
chr4 (56-113)||(2870939-2870995)
chr4 (56-113)||(3784966-3785022)
chr4 (32-113)||(30057253-30057334)
chr4 (32-105)||(39401032-39401105)
chr4 (32-113)||(42134415-42134496)
chr4 (32-113)||(44568178-44568258)
chr4 (32-113)||(45303942-45304022)
chr4 (32-113)||(55021585-55021666)
chr4 (65-113)||(3039167-3039215)
chr4 (69-113)||(3161090-3161134)
chr4 (32-104)||(32339355-32339427)
chr4 (69-113)||(37442031-37442075)
chr4 (41-113)||(38848079-38848150)
chr4 (32-100)||(45665002-45665070)
chr4 (73-113)||(47586290-47586330)
chr4 (32-104)||(49056806-49056878)
chr4 (56-104)||(54215816-54215864)
[»] chr6 (19 HSPs)
chr6 (39-113)||(18904303-18904377)
chr6 (39-113)||(32621540-32621614)
chr6 (32-113)||(3709890-3709971)
chr6 (32-113)||(6196307-6196388)
chr6 (56-124)||(1368134-1368202)
chr6 (78-124)||(2044587-2044633)
chr6 (65-111)||(31980919-31980965)
chr6 (56-113)||(32141994-32142051)
chr6 (32-100)||(20846077-20846145)
chr6 (73-113)||(29646709-29646749)
chr6 (69-113)||(32616452-32616496)
chr6 (56-115)||(361218-361277)
chr6 (39-113)||(8297665-8297739)
chr6 (35-105)||(31886430-31886500)
chr6 (32-113)||(7545360-7545441)
chr6 (69-122)||(24878163-24878216)
chr6 (56-124)||(2711485-2711553)
chr6 (69-113)||(28021300-28021344)
chr6 (32-104)||(32049932-32050004)
[»] scaffold0141 (1 HSPs)
scaffold0141 (69-110)||(39870-39911)
[»] scaffold0088 (1 HSPs)
scaffold0088 (32-113)||(10784-10865)
[»] scaffold0049 (1 HSPs)
scaffold0049 (69-110)||(74901-74942)


Alignment Details
Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 27094383 - 27094194
Alignment:
Q  17 cataggtaggggacgtgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgt 116  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27094383 cataggtaggggacgtgcataatatatgcacgggacggagctcgaactccaaacacctcacttctctacatttaaaatgtgtgagcttcaaccactatgt 27094284  T
Q  117 tatttg---acnnnnnnnnnnnnnntacatagatgtagccctcccctataagaattttgcactctattaacaatgagttagttaaatggt 203  Q
    ||||||   |               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27094283 tatttgaaaaaaaaaaaaaaaaaaatacatagatgtagccctcccctataagaattttgcactctattaacaatgagttagttaaatggt 27094194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 16182229 - 16182321
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||| |||||||| |||  ||||||||||  || |||||| |||||||| ||||||||||||||||| ||| |  ||||||||||||||||    
T  16182229 tgcatattatatgcatgggctggagttcgaatcccgaacaccccacttctccacatttaaaatgtgtgaactcaagtcactatgttatttgac 16182321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 42735912 - 42735992
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccact 112  Q
    ||||||||||||||| ||| | | ||| ||| |||  ||||| ||||||||||||||||||||||||||||||||| ||||    
T  42735912 tgcataatatatgcaggggtctgggtttgaattccggacaccccacttctctacatttaaaatgtgtgagctccaatcact 42735992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 52431855 - 52431925
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagct 103  Q
    ||||||||||||||| ||||| | |||| ||| |||||||||||||||||| ||||||||||| ||||||||    
T  52431855 tgcataatatatgca-gggaccgggttcaaaccccaaacacctcacttctccacatttaaaatatgtgagct 52431925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 18512607 - 18512533
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  18512607 tatatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccacta 18512533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 36314018 - 36313938
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| ||| |||| ||| |||||||||||| || |||||| |||||||| ||| ||| ||||||||||||||||||||||    
T  36314018 tgcatattatttgcaggggccggagttcgaaccccgaacaccccacttctccaca-ttataatgtgtgagctccaaccacta 36313938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 37662596 - 37662515
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| || ||||| ||  ||||| |||||||||||| ||||| ||||||||||||||||||||    
T  37662596 tgcatattatatgcaggggtcggggtacgaaccccggacaccccacttctctacagttaaattgtgtgagctccaaccacta 37662515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 12613245 - 12613289
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||    
T  12613245 acaccccacttctctacatttaaaatgtgtgagctccaatcacta 12613289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 8741506 - 8741585
Alignment:
Q  34 cataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||| |||  || |||||||| ||  ||||| |||||||| ||||||| ||||||||||||||||||||||    
T  8741506 cataatttatgcaggggcaggggttcgaacccctgacaccccacttctccacatttataatgtgtgagctccaaccacta 8741585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 4865861 - 4865780
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||| | ||| |||||||||||| || |||||  |||||||  |||||||| || |||||||| |||||||||    
T  4865861 tgcataatatatgtaggggtcggagttcgaaccccgaacactccacttcttcacatttaatatatgtgagctacaaccacta 4865780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 1604263 - 1604171
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||| |||||| | ||| ||| |||||||| |   ||||| || ||||| ||||||||||||||||||||| |||||||| |||| |||||    
T  1604263 tgcatattatatgtaggggtcggggttcgaacccttgacaccacaattctccacatttaaaatgtgtgagctctaaccactaggttagttgac 1604171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 7180653 - 7180581
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| ||| |||||||||||| ||  ||||| |||||||| ||| ||||| |||||||||||    
T  7180653 tgcatattatatgcaggggccggagttcgaaccccggacaccccacttctccacaattaaattgtgtgagctc 7180581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 23233982 - 23234054
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| ||| ||| |||||||| ||| |||||  ||||||| ||||||| |||||||||||||    
T  23233982 tgcatattatatgcaggggtcggggttcgaaccccagacaccctacttctccacatttataatgtgtgagctc 23234054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 35605662 - 35605590
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| ||| ||| |||||||| | ||||||| |||||||| ||| ||||| |||||||||||    
T  35605662 tgcatattatatgcaggggtcggggttcgaaccctaaacaccccacttctccacaattaaattgtgtgagctc 35605590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 45518358 - 45518422
Alignment:
Q  34 cataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgt 98  Q
    ||||||||||||| ||  ||  ||||||||  || ||||||||||||||||||||||||||||||    
T  45518358 cataatatatgcagggatcgaggttcgaacctcatacacctcacttctctacatttaaaatgtgt 45518422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 27579511 - 27579432
Alignment:
Q  34 cataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||| |||||||| ||| || ||||||||| | | ||||| || ||||| ||||||||||||||||||||| | ||||||    
T  27579511 catattatatgcaggggccgaagttcgaaccctagacaccccatttctccacatttaaaatgtgtgagctctagccacta 27579432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 13763835 - 13763873
Alignment:
Q  75 cacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  13763835 cacttctctacatttaaaatgtgtgagcttcagccacta 13763873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 18911889 - 18911963
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| | | |||||||| ||  ||||| |||| ||| ||||||||||||||||||||||| ||||||    
T  18911889 tatatgcaggggtcagggttcgaaccccggacaccccactcctccacatttaaaatgtgtgagctccagccacta 18911963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 45180518 - 45180480
Alignment:
Q  75 cacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  45180518 cacttctctacatttataatgtgtgagctccagccacta 45180480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 51137818 - 51137895
Alignment:
Q  35 ataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||| |||||| ||| ||||||||||||||   ||| | |||||||| |||||| ||||||| |||||||||||||||    
T  51137818 ataatttatgcaggggccggagttcgaactctggacatcccacttctccacattt-aaatgtgcgagctccaaccacta 51137895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 7191063 - 7191144
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| |||  || |||||||| ||  |||||||||||||| ||| ||||| ||||||||||| | ||||||    
T  7191063 tgcatattatatgcaggggctggggttcgaaccccggacacctcacttctccacaattaaattgtgtgagctctagccacta 7191144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 11344469 - 11344550
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||| |  || |||||||||||| |   |||||||||||||| ||||| || ||||||||||| || ||||||    
T  11344469 tgcataatatatgtagaggccggagttcgaaccctggacacctcacttctccacattaaatatgtgtgagcttcagccacta 11344550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 11502489 - 11502570
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||| |  || |||||||||||| |   |||||||||||||| ||||| || ||||||||||| || ||||||    
T  11502489 tgcataatatatgtagaggccggagttcgaaccctggacacctcacttctccacattaaatatgtgtgagcttcagccacta 11502570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 21265687 - 21265768
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||| ||||| ||||||||||| | ||||||    
T  21265687 tgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccacta 21265768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 33033157 - 33033238
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||  ||| |||||||| | | ||||| || ||||| ||| ||||||||||||||||| ||||||||    
T  33033157 tgcatattatatgcagggaccggggttcgaaccctagacaccccatttctccacaattaaaatgtgtgagctctaaccacta 33033238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 1195321 - 1195229
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    ||||||||||||||| ||| || |  ||||||  | ||||||||||||||  | ||||||||| |||||||| ||| ||||| | ||||||||    
T  1195321 tgcataatatatgcaggggccgaaaatcgaacctctaacacctcacttctgcatatttaaaatatgtgagctacaatcactaggctatttgac 1195229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 4553548 - 4553504
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||||| ||| ||||| ||||||||||| ||||||||    
T  4553548 acacctcacttctccacaattaaattgtgtgagctctaaccacta 4553504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 5431041 - 5430997
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||| ||||| || ||||||||||||||||||||||| ||||||    
T  5431041 acaccccacttatccacatttaaaatgtgtgagctccagccacta 5430997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 11333695 - 11333766
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||||| |||||| ||| |||||||||||| ||  ||||| |||||||| |||||| || |||||||||||    
T  11333695 tgcataatttatgcaggggccggagttcgaaccccggacaccccacttctccacattt-aattgtgtgagctc 11333766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 11491716 - 11491787
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||||| |||||| ||| |||||||||||| ||  ||||| |||||||| |||||| || |||||||||||    
T  11491716 tgcataatttatgcaggggccggagttcgaaccccggacaccccacttctccacattt-aattgtgtgagctc 11491787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 36860629 - 36860701
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| ||||||||  || ||| || ||||| ||  ||||| |||||||| |||||||||||||||||||||    
T  36860629 tgcatattatatgcagaggccggggtccgaaccccggacaccccacttctccacatttaaaatgtgtgagctc 36860701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 41998381 - 41998453
Alignment:
Q  34 cataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    |||||||||| ||  || ||| |||||||| | | |||||  ||||||| |||||||||||||||||||||||    
T  41998381 cataatatatacaacggtcggggttcgaaccctagacaccctacttctccacatttaaaatgtgtgagctcca 41998453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 18254627 - 18254712
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||||| ||| ||| |||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||| |||| |||||    
T  18254627 tatatgcaggggccggggttcgaactccagacaccccacttcttcacatttaaaatgtgtgagctccaaccactaggttacttgac 18254712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 15939344 - 15939401
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| || |||||| |||||||| ||||||||||||||||||||||| ||||||    
T  15939344 gttcgaaccccgaacaccccacttctccacatttaaaatgtgtgagctccagccacta 15939401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 39635331 - 39635412
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||||   ||| ||| |||||||||||| ||||  |||||||| ||||||||||||||||| ||||| ||||||    
T  39635331 tgcataatatatgttggggtcggggttcgaactccagacactccacttctccacatttaaaatgtgtgatctccagccacta 39635412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 5947904 - 5947978
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||| |||| ||| ||||||||||||||||||||||| ||||||    
T  5947904 tatatgcaggggtcggggttcgaaccccggacaccccactcctccacatttaaaatgtgtgagctccagccacta 5947978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 32854570 - 32854644
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  |||||  ||||||| ||||||||||||||||||||||| ||||||    
T  32854570 tatatgcaagggccggggttcgaaccccggacaccctacttctccacatttaaaatgtgtgagctccagccacta 32854644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 8250340 - 8250259
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||| |||| |||| |||| ||| ||||| ||||||||||| ||||||||    
T  8250340 tgcatattatatgcaggggccggggttcgaaccccagacacttcacctctccacaattaaattgtgtgagctctaaccacta 8250259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 38533615 - 38533656
Alignment:
Q  68 aacacctcacttctctacatttaaaatgtgtgagctccaacc 109  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  38533615 aacacctcacttctcaacatttaaaatgtgtgagcaccaacc 38533656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 28194663 - 28194755
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||| |||||||| |||  ||||||||||| ||  ||||| |||||||| ||| ||||| ||||||||||| | |||||| | ||||||||    
T  28194663 tgcatattatatgcaggggctggagttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctatttgac 28194755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 36748927 - 36748991
Alignment:
Q  42 atgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    ||||| ||| ||| ||||||||| | |||||  |||||||| |||||||||||||||||||||||    
T  36748927 atgcaggggtcggggttcgaacttcgaacactccacttctccacatttaaaatgtgtgagctcca 36748991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 44898497 - 44898449
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||||||||  ||||| |||||||| |||||||||||||||||||||    
T  44898497 gttcgaactccggacaccccacttctccacatttaaaatgtgtgagctc 44898449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 10463229 - 10463160
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctc---acttctctacatttaaaatgtgtgagctcc 105  Q
    |||||||| ||| ||| |||||||| || |||||| |   ||||||||||||||||||||||||||||||    
T  10463229 tatatgcaggggccggggttcgaaccccgaacacccccccacttctctacatttaaaatgtgtgagctcc 10463160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 13424103 - 13424056
Alignment:
Q  53 ggagttcgaactccaaacacctcacttctctacatttaaaatgtgtga 100  Q
    |||||||||||  |||||| |||||||||| |||||||||||||||||    
T  13424103 ggagttcgaacatcaaacatctcacttctccacatttaaaatgtgtga 13424056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 32857964 - 32857905
Alignment:
Q  54 gagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||  ||||||||  ||||||| |||||||| |||||||||||| ||||||||    
T  32857964 gagttcgaaccacaaacacccaacttctccacatttaatatgtgtgagctcaaaccacta 32857905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 7717637 - 7717571
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcc 105  Q
    |||||||| ||| ||| ||||||||| |  ||||  |||||||| ||||||||||||||||||||||    
T  7717637 tatatgcaggggtcggggttcgaacttcggacactccacttctccacatttaaaatgtgtgagctcc 7717571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 23984255 - 23984181
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| | | |||||||| ||  ||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  23984255 tatatgcaggggccagggttcgaaccccggacaccccacttctccacatttaaaatgtgtgaactccagccacta 23984181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 38534138 - 38534172
Alignment:
Q  68 aacacctcacttctctacatttaaaatgtgtgagc 102  Q
    ||||||||||||||| |||||||||||||||||||    
T  38534138 aacacctcacttctcaacatttaaaatgtgtgagc 38534172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 3596281 - 3596361
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| |||||| ||| ||| |||||||| ||  ||||| |||||||| ||||||||  ||||||||||||| ||||||    
T  3596281 tgcataatttatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaat-tgtgtgagctccagccacta 3596361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 5612985 - 5613066
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||| || || ||||||||||| ||||||||    
T  5612985 tgcatattatatgcaagggccggggttcgaaccccggacaccccacttctccacaatttaattgtgtgagctctaaccacta 5613066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 6973407 - 6973463
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||||||||||||||||| | | ||||||||||||| ||| || |||||    
T  6973407 gttcgaactccaaacacctcacttctcca-aattaaaatgtgtgaactctaatcacta 6973463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 20497197 - 20497160
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  20497197 acaccccacttctccacatttaaaatgtgtgagctcca 20497160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 33228972 - 33228891
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||| ||||| ||||||||||| | ||||||    
T  33228972 tgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccacta 33228891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 42998888 - 42998827
Alignment:
Q  35 ataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgt 96  Q
    |||||||||||| ||| |||||||||||||||  |||||  |||||||  ||||||||||||    
T  42998888 ataatatatgcaggggccggagttcgaactccggacacccgacttctccgcatttaaaatgt 42998827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 7907561 - 7907501
Alignment:
Q  53 ggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||  |||||||| |||||||||||| || || |||||||| || ||||||||    
T  7907561 ggagttcgaaccacaaacaccccacttctctacaatttaattgtgtgagttctaaccacta 7907501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 14518324 - 14518396
Alignment:
Q  41 tatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| ||| ||| ||||||||  | |||||  |||||||| | ||||||||||||||||||||| ||||||    
T  14518324 tatgcaggggccggggttcgaacctcgaacactccacttctccatatttaaaatgtgtgagctccagccacta 14518396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 15795984 - 15795916
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    ||||||| |||||||| |  ||||||| |||||||||||||||||| |  | |||||| ||||||||||    
T  15795984 gttcgaattccaaacatcctacttctccacatttaaaatgtgtgagttatagccactaggttatttgac 15795916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 33549069 - 33549021
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||||| |||||||| ||||||||| ||| ||||| |||||||||||    
T  33549069 gttcgaaccccaaacacttcacttctccacaattaaattgtgtgagctc 33549021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 39408729 - 39408637
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||| |||||||| | | ||| |||||||| ||| ||||  |||||||| ||| ||||| ||||||||||| | |||||||| || |||||    
T  39408729 tgcatattatatgcaagagccggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctagccactatgctacttgac 39408637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 42756221 - 42756288
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||||||||| ||||| |||||||||||||||  || |||||||||| | ||| ||||||| |||||    
T  42756221 gttcgaactccatacaccccacttctctacattt-taacgtgtgagctctagccattatgttacttgac 42756288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 885173 - 885116
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||    
T  885173 gttcgaactccgaacacctcacttctccatatttaaaatgtgtgagctccaaccacta 885116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 8241081 - 8241162
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||||||||||||||||||||| ||||||||    
T  8241081 tgcatattatatgcaagggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctctaaccacta 8241162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 34434302 - 34434258
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  34434302 acacctcatttctctacatttaaaatgtgtgagctccaaccacta 34434258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 3740992 - 3741066
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  3740992 tatatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccacta 3741066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 29499213 - 29499287
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||||||||||||||||||||||  || |||| | ||||||||||||| ||||| ||||||||    
T  29499213 tatatgcaggggtcggagttcgaactccaaacaccctacctctccatatttaaaatgtgtaagctctaaccacta 29499287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 4418344 - 4418295
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccactatgtta 118  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  4418344 acacctcatttctccacatttaaaatgtgtgagctccaaccactaggtta 4418295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 33373019 - 33372960
Alignment:
Q  53 ggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||| ||||||| ||||||    
T  33373019 ggagttcgaactccgaacacc-cacttctccacatttaaaatgtgtaagctccagccacta 33372960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 7545400 - 7545345
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    ||||| |||||||| ||||||||||||||||||| | ||||||||||||| |||||    
T  7545400 acaccccacttctccacatttaaaatgtgtgagcgctaaccactatgttacttgac 7545345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 14970347 - 14970401
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttga 123  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||| |||| ||||    
T  14970347 acaccccacttctctacatttaaaatgtgtaagctccaatcactaggttacttga 14970401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 5195160 - 5195103
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||  || |||||||||||||||| |||||||||||||||| |||||| ||||    
T  5195160 gttcgaacctcagacacctcacttctctatatttaaaatgtgtgagttccaactacta 5195103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 6734777 - 6734697
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||| | ||| |||  |||||| |||  ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  6734777 tgcataatatatgtaggggccgggtttcgaa-tcccgacaccccacttctccacatttaaaatgtgtgagctccagccacta 6734697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 17693224 - 17693153
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcc 105  Q
    |||||||| |||||| ||| |||||||||||| ||| ||||| ||||||||||||| | |||||||||||||||    
T  17693224 tgcataatttatgca-gggtcggagttcgaaccccagacaccgcacttctctacatct-aaatgtgtgagctcc 17693153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 36564458 - 36564369
Alignment:
Q  35 ataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||||||||  ||| ||||||||||||  |  ||||| ||| |||| | |||||||||||||||||||||  |||||||||| |||||    
T  36564458 ataatatatgctggggccggagttcgaaccacggacaccccacctctccatatttaaaatgtgtgagctccagtcactatgttacttgac 36564369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 6167280 - 6167324
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||    
T  6167280 acacctcacttctccacatttaaaatgtgtgagctctagccacta 6167324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 7443407 - 7443451
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||    
T  7443407 acaccccacttctccacatttataatgtgtgagctccaaccacta 7443451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 16745112 - 16745184
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||| | ||| |||||||||||||||| ||||| |||||||| ||| ||||| | |||||||||    
T  16745112 tgcatattatatgtaggggtcggagttcgaactccagacaccccacttctccacaattaaattatgtgagctc 16745184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 34730049 - 34729977
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| ||| |||||||||||||| | ||||||||  |||  ||||||||||| |||||||||    
T  34730049 tgcatattatatgcaggggtcggagttcgaactctagacacctcatctcttaacatttaaaatatgtgagctc 34729977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 42320348 - 42320440
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||| |||||||| | | |||||||||||| || |||||  |||||||| ||| ||||| ||||||||||| | |||||| |||| |||||    
T  42320348 tgcatattatatgcaggagtcggagttcgaaccccgaacactccacttctccacaattaaattgtgtgagctctagccactaggttacttgac 42320440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 15241187 - 15241110
Alignment:
Q  34 cataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||| |||||||| |||  ||||||||||| ||||| || ||||||||| ||||| ||||||||||||||| ||||||||    
T  15241187 catattatatgcatgggctggagttcgaaccccaaaaac-tcacttctccacatt-aaaatgtgtgagctctaaccacta 15241110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 17891891 - 17891816
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacattt-aaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||| |||||||| |||||| ||||||||||||||||| ||||||    
T  17891891 tatatgcaggggccggggttcgaaccccggacaccccacttctccacattttaaaatgtgtgagctccagccacta 17891816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 33383646 - 33383685
Alignment:
Q  74 tcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  33383646 tcacttctcaacatttaaaatgtgtgagctctaaccacta 33383685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 3821417 - 3821379
Alignment:
Q  75 cacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  3821417 cacttctccacatttaaaatgtgtgagctccagccacta 3821379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 8752565 - 8752515
Alignment:
Q  54 gagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||||||| ||| ||| |||||||||| || ||||||||||||||||||    
T  8752565 gagttcgaaccccacacatctcacttctccacgtttaaaatgtgtgagctc 8752515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 22228994 - 22228920
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| |||||||||||||||  ||||  |||||||||||| ||||| ||||| |||||  |||||||    
T  22228994 tatatgcaggggtcggagttcgaactccggacactccacttctctacaattaaattgtgtaagctctgaccacta 22228920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 23937965 - 23937891
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||| |||| ||| |||||||||||||||||||| || ||||||    
T  23937965 tatatgcaggggccggggttcgaaccccggacaccccactcctccacatttaaaatgtgtgagctacagccacta 23937891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 25460796 - 25460738
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaa-tgtgtgagctccaaccacta 113  Q
    |||||||| || |||||| |||||||| |||||||||| ||||||||||| ||||||||    
T  25460796 gttcgaaccccgaacaccccacttctccacatttaaaaatgtgtgagctctaaccacta 25460738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 39804463 - 39804417
Alignment:
Q  54 gagttcgaactccaaacacctcacttctctacatttaaaatgtgtga 100  Q
    ||||||||||| || ||||  ||||||||||||||||||||||||||    
T  39804463 gagttcgaacttcagacactccacttctctacatttaaaatgtgtga 39804417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 41930143 - 41930217
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| |||  || |||||||| ||| ||||| |||||||||||| ||||| ||||||||||| | ||||||    
T  41930143 tatatgcaggggctggggttcgaaccccagacaccccacttctctacaattaaattgtgtgagctctagccacta 41930217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 6234833 - 6234761
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcc 105  Q
    ||||||||||||||| ||||  | |||||||||||||||||  |||||||  ||||||||||| | ||||||||    
T  6234833 tgcataatatatgca-gggattgggttcgaactccaaacacaccacttctacacatttaaaatatatgagctcc 6234761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 16819304 - 16819263
Alignment:
Q  72 cctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||| | |||||||||||||||| ||||||||||||    
T  16819304 cctcacttctatgcatttaaaatgtgtgaactccaaccacta 16819263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 39800069 - 39799988
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| |||||| |||  || | |||||| ||  ||||| |||||||| |||||||||||||||||||| || ||||||    
T  39800069 tgcataatttatgcaggggcaggggctcgaacccctgacaccccacttctccacatttaaaatgtgtgagcttcagccacta 39799988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 546833 - 546925
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||| |||||||| ||| ||| ||||||||  | |||| | |||||||  ||| ||||| ||||||||||| |||||||| | ||||||||    
T  546833 tgcatattatatgcaggggtcggggttcgaacctcgaacatcccacttcttcacaattaaattgtgtgagctctaaccactaggctatttgac 546925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 6558832 - 6558904
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| ||| ||| |||||||||||  |||||  ||||||| ||| ||||| |||||||||||    
T  6558832 tgcatattatatgcaggggtcggggttcgaactccggacaccctacttctccacaattaaattgtgtgagctc 6558904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 18928751 - 18928823
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||||| |||||| ||| ||| ||||||||  |  ||||||||||| || ||||||||| |||||||||||    
T  18928751 tgcataatttatgcaggggtcggtgttcgaaccacggacacctcacttttccacatttaaattgtgtgagctc 18928823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 20707826 - 20707754
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| |||  || |||||||| ||| |||| ||||||||| ||| ||||| |||||||||||    
T  20707826 tgcatactatatgcaggggttggggttcgaaccccagacacttcacttctccacaattaaattgtgtgagctc 20707754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 24456220 - 24456298
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccact 112  Q
    |||||||| |||||| ||| |||||||||||| ||  ||||| |||||||| ||| || |||||||||||||||| |||||    
T  24456220 tgcataatttatgcaggggtcggagttcgaaccccggacacc-cacttctccacagtt-aaatgtgtgagctccagccact 24456298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 30872390 - 30872342
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||||||| |||||  |||||||| ||||||||| ||||||||||||    
T  30872390 gttcgaactctaaacaaatcacttctttacatttaatatgtgtgagctc 30872342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 25884027 - 25883946
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||||| ||| ||| |||||||| ||  ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  25884027 tgcataatatatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccacta 25883946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 15085716 - 15085642
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  |||||||||||||| | ||||||||||||||||||||| ||||||    
T  15085716 tatatgcaggggtcggggttcgaaccccggacacctcacttctccatatttaaaatgtgtgagctccagccacta 15085642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 27329964 - 27329890
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  27329964 tatatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccacta 27329890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 41253781 - 41253707
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| || |||||||||||| || | ||||||||||||||||||||| ||||||    
T  41253781 tatatgcaggggccggggttcgaaccccgaacacctcacttttccatatttaaaatgtgtgagctccagccacta 41253707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 44625257 - 44625183
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||| |||||||| |||||||||||||| |||||||||||||||    
T  44625257 tatatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaatgtgggagctccaaccacta 44625183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 51879133 - 51879207
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  51879133 tatatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccacta 51879207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 4808048 - 4808003
Alignment:
Q  68 aacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||    
T  4808048 aacaccccacttctctacatttaaaatgtgtgagctctaaccacta 4808003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 23653255 - 23653175
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||||| ||| ||| |||||||| || |||||||||||| || ||| ||||||||||||||||| | ||||||    
T  23653255 tgcataatatatgcaggggtcggggttcgaaccccgaacacctcacttatccaca-ttaaaatgtgtgagctctagccacta 23653175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 14795142 - 14795222
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccact 112  Q
    ||||||||||||||| | | | | |||| ||| ||  ||||| |||||||| |||||||||||||||||||||||||||||    
T  14795142 tgcataatatatgcaggtgccagggttcaaaccccggacaccccacttctccacatttaaaatgtgtgagctccaaccact 14795222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 36472445 - 36472389
Alignment:
Q  57 ttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||||||| ||||||    
T  36472445 ttcgaactccaaacaacccacttctccacattaaaaatgtgtgagctccagccacta 36472389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 41710651 - 41710695
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||    
T  41710651 acacctcacttctccacatttaaaatgtgtgagctccagccacta 41710695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 26880208 - 26880285
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaacca 110  Q
    |||||||| |||||| ||| ||| ||||||||| || ||||| |||||||| ||||||||| ||||||||||| |||||    
T  26880208 tgcataatttatgcaggggtcggggttcgaacttcagacaccccacttctccacatttaaa-tgtgtgagctctaacca 26880285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 49028975 - 49028901
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||  ||| |||||||| || |||||  |||||||| |||||||||||| |||||||||||||||||    
T  49028975 tatatgcagggaccggggttcgaaccccgaacactccacttctccacatttaaaatgcgtgagctccaaccacta 49028901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 8488495 - 8488532
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    |||||||||||||| |||||||||||||||||||||||    
T  8488495 acacctcacttctccacatttaaaatgtgtgagctcca 8488532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 9114067 - 9114116
Alignment:
Q  57 ttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    |||||| |||| ||||| |||||||| |||||||||||||||||||||||    
T  9114067 ttcgaattccagacaccccacttctccacatttaaaatgtgtgagctcca 9114116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 32429798 - 32429859
Alignment:
Q  52 cggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||| ||| ||||| |||||||| ||| ||||| ||||||||||| ||||||||    
T  32429798 cggagttcgaaccccagacaccccacttctccacaattaaattgtgtgagctctaaccacta 32429859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 35849512 - 35849592
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| |||||| ||| ||| |||||||| ||||||||| ||||||||  |||||||  ||||||||||||| ||||||    
T  35849512 tgcataatttatgcaggggccggggttcgaaccccaaacaccccacttctccccatttaat-tgtgtgagctccagccacta 35849592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 39709112 - 39709161
Alignment:
Q  75 cacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||||| ||||||||||||||||||||||| |||||| |||| |||||    
T  39709112 cacttctccacatttaaaatgtgtgagctccagccactaggttaattgac 39709161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 48546228 - 48546285
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||  |||||||||||||||||| ||||| ||||||||||| ||||||||    
T  48546228 gttcgaaccccggacacctcacttctctacaattaaattgtgtgagctctaaccacta 48546285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 49443462 - 49443382
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| |||||| ||| |||||||||||| ||  ||||| |||||||| |||||| |||||||||||||| | ||||||    
T  49443462 tgcataatttatgcaggggccggagttcgaaccccggacaccccacttctccacattt-aaatgtgtgagctctagccacta 49443382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 23090284 - 23090364
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccact 112  Q
    |||||||||||||||  || ||| |||||||  ||| ||||| |||||||| ||||  ||||||||||||||||| |||||    
T  23090284 tgcataatatatgcaatggtcggggttcgaatcccagacaccccacttctccacataaaaaatgtgtgagctccagccact 23090364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 34102650 - 34102558
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||| ||||| ||||||||||| | |||||| |||| |||||    
T  34102650 tgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaactgtgtgagctctagccactaggttacttgac 34102558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 46336539 - 46336460
Alignment:
Q  34 cataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||| ||| ||| |||||||| || |||||| ||||| || |||||  | ||||||||| |||||||||||    
T  46336539 cataatatatgcaggggtcggggttcgaaccccgaacaccccacttttccacattatatatgtgtgagttccaaccacta 46336460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 10828521 - 10828575
Alignment:
Q  52 cggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    |||||||||||| ||| ||||| |||||||| ||||| |||||||||||| ||||    
T  10828521 cggagttcgaaccccagacaccccacttctccacattaaaaatgtgtgagttcca 10828575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 46767417 - 46767455
Alignment:
Q  75 cacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  46767417 cacttctccacatttaaaatgtgtgagctccagccacta 46767455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 46845010 - 46844937
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    |||||||| |||||| ||| |||||||||||| ||  |||||  ||||||| |||||| ||||||||||||||||    
T  46845010 tgcataatttatgcaggggtcggagttcgaaccccggacaccctacttctccacattt-aaatgtgtgagctcca 46844937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 4860216 - 4860273
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||||| |||||||| ||| ||||| ||||||||||| ||||||||    
T  4860216 gttcgaaccccagacaccccacttctccacaattaaattgtgtgagctctaaccacta 4860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 4880224 - 4880281
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||||| |||||||| ||| ||||| ||||||||||| ||||||||    
T  4880224 gttcgaaccccagacaccccacttctccacaattaaattgtgtgagctctaaccacta 4880281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 16991896 - 16991945
Alignment:
Q  61 aactccaaacacctcacttctctacatttaaaatgtgtgagctccaacca 110  Q
    ||||||| ||| |||||||||| | |||||||||||||||||| ||||||    
T  16991896 aactccagacatctcacttctccatatttaaaatgtgtgagctacaacca 16991945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 19879239 - 19879324
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||||| ||| ||| |||||||| || |||||| |||||||  ||| ||||| ||||||||||| | |||||||| || |||||    
T  19879239 tatatgcaggggccggggttcgaaccccgaacaccccacttcttcacaattaaattgtgtgagctctagccactatgctacttgac 19879324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 34102104 - 34102180
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaa--tgtgtgagctccaaccacta 113  Q
    |||||||| |||  || |||||||| ||  |||||||| ||||| ||||||||||  ||||||||||||||||||||    
T  34102104 tatatgcaggggctggggttcgaaccccggacacctcatttctccacatttaaaaaatgtgtgagctccaaccacta 34102180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 39719966 - 39720047
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||| ||||| ||||||||||| | ||||||    
T  39719966 tgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccacta 39720047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 41936446 - 41936365
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||| ||||| ||||||||||| | ||||||    
T  41936446 tgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccacta 41936365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 47098763 - 47098844
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||| ||||  |||||||| ||| ||||| ||||||||||| | ||||||    
T  47098763 tgcatattatatgcaggggccggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctagccacta 47098844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 53432776 - 53432695
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||| ||||| ||||||||||| | ||||||    
T  53432776 tgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccacta 53432695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 8171734 - 8171674
Alignment:
Q  53 ggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||| | ||||||| ||||| |||||| ||||||||||| ||||| | ||||||    
T  8171734 ggagttcgaaccctaaacaccccacttttctacaattaaaatgtgtaagctctagccacta 8171674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 26942784 - 26942856
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| ||| | | ||||||||  || ||||| |||||||||||| ||||| |||||||||||    
T  26942784 tgcatattatatgcaggggccagggttcgaaccgcagacaccccacttctctacaattaaattgtgtgagctc 26942856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 31327757 - 31327669
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatt 120  Q
    |||||| |||||||| | | ||| |||||||| ||  ||||  |||||||| ||| ||||| ||||||||||| | |||||||||||||    
T  31327757 tgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactatgttatt 31327669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 31586978 - 31587050
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| ||| |||||||||||  ||  ||||| |||||||| ||| ||||| |||||||||||    
T  31586978 tgcatattatatgcaggggtcggagttcgaatcccggacaccccacttctccacaattaaattgtgtgagctc 31587050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 36478186 - 36478146
Alignment:
Q  73 ctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||| ||||| ||||||||||||||||| ||||||    
T  36478186 ctcacttctccacattaaaaatgtgtgagctccagccacta 36478146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 40723662 - 40723618
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||||| ||||||||||||||||| ||| || |||||    
T  40723662 acacctcacttctccacatttaaaatgtgtgaactctaatcacta 40723618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 51143552 - 51143497
Alignment:
Q  55 agttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccac 111  Q
    ||||||||||||  ||||||||||| || || ||||||||||||||||| |||||||    
T  51143552 agttcgaactccggacacctcacttttc-acgtttaaaatgtgtgagcttcaaccac 51143497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 13105122 - 13105196
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    ||||||||||||||| ||| ||| ||||||||  || ||||| |||||||| |||||||||||||||||||||||    
T  13105122 tgcataatatatgcaagggccggggttcgaacctcagacaccccacttctccacatttaaaatgtgtgagctcca 13105196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 5328606 - 5328525
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  |||||||||||||| ||| ||||||||||||||||| | ||||||    
T  5328606 tgcatattatatgcaggggccggggttcgaaccccggacacctcacttctccacaattaaaatgtgtgagctctagccacta 5328525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 33810678 - 33810763
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||||| ||| ||| |||| ||| ||  ||||| |||||||| ||||||||||||||||||||||| |||||| | ||||||||    
T  33810678 tatatgcaggggccggggttcaaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaagctatttgac 33810763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 26217859 - 26217903
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||    
T  26217859 acacctcacttctccacatttaaaatgtgtgatctccaaccacta 26217903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 34873124 - 34873198
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| ||||||||  |  ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  34873124 tatatgcaggggtcggggttcgaacctcggacaccccacttctccacatttaaaatgtgtgagctccagccacta 34873198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 36035211 - 36035137
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| ||||||||  |  ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  36035211 tatatgcaggggtcggggttcgaacctcggacaccccacttctccacatttaaaatgtgtgagctccagccacta 36035137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 37708729 - 37708803
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||| | |||||||| ||||||||||||||||||||||| ||||||    
T  37708729 tatatgcaggggccggggttcgaaccccggacatcccacttctccacatttaaaatgtgtgagctccagccacta 37708803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 13059216 - 13059135
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| |||||| |||  || |||||||| ||  ||||| |||||||| |||||||||||||||| |||||| ||||||    
T  13059216 tgcataatttatgcaggggcaggggttcgaacccctgacaccccacttctccacatttaaaatgtgtgtgctccagccacta 13059135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 14583228 - 14583309
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||||| |||  || ||||||||  | |||||| |||||||| ||||| || |||||||||||||| ||||||    
T  14583228 tgcataatatatgcaggggctggggttcgaaccacgaacaccccacttctccacattaaatatgtgtgagctccagccacta 14583309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 17072602 - 17072521
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| || |||||| |||||||| ||| ||||| ||||||||||| | ||||||    
T  17072602 tgcatattatatgcaggggccggggttcgaaccccgaacaccccacttctccacaattaaattgtgtgagctctagccacta 17072521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 17575669 - 17575750
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| || |||||| |||||||| ||| ||||| ||||||||||| | ||||||    
T  17575669 tgcatattatatgcaggggccggggttcgaaccccgaacaccccacttctccacaattaaattgtgtgagctctagccacta 17575750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 21303490 - 21303429
Alignment:
Q  52 cggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||  || |||||||||||||| |||| |||||||| ||||||| ||||||||    
T  21303490 cggagttcgaaccacagacacctcacttctccacatataaaatgtttgagctctaaccacta 21303429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 31024349 - 31024406
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||  ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  31024349 gttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccacta 31024406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 41086665 - 41086726
Alignment:
Q  52 cggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||||| |||||| |||||||| ||| ||||| |||||||||||  |||||||    
T  41086665 cggagttcgaactccgaacaccccacttctccacaattaaattgtgtgagctctgaccacta 41086726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 44053455 - 44053398
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||  ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  44053455 gttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccacta 44053398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 30300360 - 30300440
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccact 112  Q
    ||||||||||||||| ||| ||| |||||||| ||  | |||  ||||||| | |||||||||||||||||||||| ||||    
T  30300360 tgcataatatatgcaggggccggggttcgaaccccggaaaccctacttctccatatttaaaatgtgtgagctccaaacact 30300440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 8183358 - 8183425
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    |||||||| ||| ||| |||||||| ||| ||| | |||||||| | |||||||||||||||||||||    
T  8183358 tatatgcaggggccggggttcgaaccccagacaacccacttctccatatttaaaatgtgtgagctcca 8183425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 9813073 - 9812999
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||  || |||||||||||   || |||||||||||||| ||||||||||||| |||| || ||||||||    
T  9813073 tatatgcagaggtcggagttcgaatctcagacacctcacttctccacatttaaaatgtatgagttctaaccacta 9812999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 36274430 - 36274475
Alignment:
Q  57 ttcgaactccaaacacctcacttctctacatttaaaatgtgtgagct 103  Q
    ||||||||||| |||||||||||||||| |||| |||||||||||||    
T  36274430 ttcgaactccatacacctcacttctctatattt-aaatgtgtgagct 36274475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 38730587 - 38730517
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaacc 109  Q
    |||||||| ||  |||||||  ||| ||| ||||| |||||||| ||||||||||| ||||||||||||||    
T  38730587 tatatgcagggatcggagtttaaaccccagacaccccacttctccacatttaaaatatgtgagctccaacc 38730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 94550 - 94469
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| | | |||||||||||| ||  ||||  |||||||| ||| ||||| ||||||||||| ||||||||    
T  94550 tgcatattatatgcaggagccggagttcgaaccccggacactccacttctccacaattaaattgtgtgagctctaaccacta 94469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 2792810 - 2792891
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||  |||||||| ||| || || ||||||||||||||||||||    
T  2792810 tgcatattatatgcaggggccggggttcgaaccccggacactccacttctccacaatttaattgtgtgagctccaaccacta 2792891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 10761870 - 10761931
Alignment:
Q  52 cggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||| | | |||||||||||||| ||| ||||| ||||||||||| | ||||||    
T  10761870 cggagttcgaaccctagacacctcacttctccacaattaaattgtgtgagctctagccacta 10761931  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 14181340 - 14181299
Alignment:
Q  73 ctcacttctctacatttaaaatgtgtgagctccaaccactat 114  Q
    ||||||||||  |||||||||||| |||||||||||||||||    
T  14181340 ctcacttctccgcatttaaaatgtatgagctccaaccactat 14181299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 21548512 - 21548455
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| || |||||| |||||||| ||| ||||||||||||||||| | ||||||    
T  21548512 gttcgaaccccgaacaccccacttctccacaattaaaatgtgtgagctctagccacta 21548455  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 34894400 - 34894481
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||| ||||| ||||||||||| | ||||||    
T  34894400 tgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacagttaaattgtgtgagctctagccacta 34894481  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 37290953 - 37291034
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||| ||||| ||||||||||| | ||||||    
T  37290953 tgcatattatatgcaggggccggcgttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccacta 37291034  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 11406681 - 11406637
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||||| ||||||||||||||||| ||  ||||||||    
T  11406681 acacctcacttctccacatttaaaatgtgtgaactttaaccacta 11406637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 12510474 - 12510406
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtga 100  Q
    ||||||||||||| | ||| ||||||||||||  || ||| |||| ||| |||| ||||||||||||||    
T  12510474 tgcataatatatgtatgggtcggagttcgaacctcagacatctcatttccctacgtttaaaatgtgtga 12510406  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 40904599 - 40904643
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||||||| |||||||||||||| ||||| || ||||||    
T  40904599 acacctcacttctccacatttaaaatgtgcgagcttcagccacta 40904643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 11692421 - 11692502
Alignment:
Q  34 cataatatatgcacgggacggagttcgaactccaaacac--ctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||| ||| |||||||||||| ||||||||  | ||||||||||||||||||||||| ||||||  |||||||    
T  11692421 cataatatatgcaagggccggagttcgaaccccaaacacaccccacttctctacatttaaaatgtgcgagctctgaccacta 11692502  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 10690878 - 10690961
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatg 115  Q
    |||||| |||||||| ||| |||||||||||| ||||||||| |||||||| ||| ||||| ||||||||| | | ||||||||    
T  10690878 tgcatattatatgcaggggtcggagttcgaaccccaaacaccccacttctccacaattaaattgtgtgagcactagccactatg 10690961  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 46758280 - 46758354
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||||||  ||||| |||| ||| ||||||||||||||||||||||| ||||||    
T  46758280 tatatgcaggggtcggggttcgaactccggacaccccactcctccacatttaaaatgtgtgagctccagccacta 46758354  T

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Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 1563778 - 1563697
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||||||| ||||| ||||||||||| ||||||||    
T  1563778 tgcatattatatgcaggggccggggttcgaaccccggacaccccacttctctacaattaaattgtgtgagctctaaccacta 1563697  T

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Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 3532609 - 3532690
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||||| ||| ||  |||||||| ||||||||  |||||||||||| ||||| ||||||||||| | ||||||    
T  3532609 tgcataatatatgcaggggccgaggttcgaaccccaaacactccacttctctacaattaaattgtgtgagctctagccacta 3532690  T

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Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 42435257 - 42435177
Alignment:
Q  34 cataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactat 114  Q
    |||||| |||||| ||| ||| |||||||| ||| | |||||||||||| ||||||||||||| |||  ||||||||||||    
T  42435257 cataatttatgcaggggccggggttcgaaccccagatacctcacttctccacatttaaaatgtctgacttccaaccactat 42435177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 43404989 - 43404941
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  43404989 gttcgaaccccaaacatctcacttctccacatttaaaatgtgtgagctc 43404941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 10363455 - 10363385
Alignment:
Q  35 ataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    ||||| |||||| ||| ||||||||||| ||  ||||||||||||||| |||||| ||||||||||||||||    
T  10363455 ataatttatgcaggggtcggagttcgaagtctgaacacctcacttctccacattt-aaatgtgtgagctcca 10363385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 27162327 - 27162260
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    |||||||| ||| |||||||||||| || | |||| |||||||  |||||||||||||||||||||||    
T  27162327 tatatgcaggggtcggagttcgaaccccgaccaccacacttctgcacatttaaaatgtgtgagctcca 27162260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 28800060 - 28799978
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaa-tgtgtgagctccaaccacta 113  Q
    |||||||| |||||| |||  || ||| |||| ||  ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  28800060 tgcataatttatgcaggggcaggggtttgaacccctgacaccccacttctctacatttaaaaatgtgtgagctccaaccacta 28799978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 37710116 - 37710197
Alignment:
Q  32 tgcataatatatgcacgggac-ggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||| | ||||| ||||||||||   | |||| |||||||||| ||||||||||||||||||||||||| ||||    
T  37710116 tgcataatatatgta-gggactggagttcgaatcacgaacatctcacttctccacatttaaaatgtgtgagctccaacaacta 37710197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 18503495 - 18503438
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||||| |||||||| ||||||||||||||||||||  ||||||||    
T  18503495 gttcgaaccccagacaccccacttctccacatttaaaatgtgtgagctttaaccacta 18503438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 20421774 - 20421717
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| | | ||| |||||||||| ||||||||||||||||||||| ||||||||    
T  20421774 gttcgaaccctagacatctcacttctccacatttaaaatgtgtgagctcgaaccacta 20421717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 29461854 - 29461762
Alignment:
Q  32 tgcataatatatgcacgggacggag-ttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    ||||||||||||||| ||| ||||| ||||||| |   ||||| ||||| |||| ||||||||||||| ||||||| |||||| ||||||||||    
T  29461854 tgcataatatatgcaggggtcggaggttcgaac-ctggacaccccacttttctatatttaaaatgtgtaagctccatccactaggttatttgac 29461762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 32047127 - 32047212
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||||| ||| ||| |||||||| ||  |||||||||||||| ||| ||||| ||||||||||| | |||||| | ||||||||    
T  32047127 tatatgcaggggccggggttcgaaccccggacacctcacttctccacaattaaattgtgtgagctctagccactaggctatttgac 32047212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 47440849 - 47440768
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||||| ||| ||| |||||||| |   ||||| |||||||| ||||| || |||||||||||||| ||||||    
T  47440849 tgcataatatatgcaggggtcggggttcgaaccctggacaccccacttctccacattaaatatgtgtgagctccagccacta 47440768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 42798332 - 42798285
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagct 103  Q
    ||||||||||| ||||||  ||||||| ||||||||||||||||||||    
T  42798332 gttcgaactccgaacacccgacttctccacatttaaaatgtgtgagct 42798285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 46645747 - 46645814
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    |||||||| ||| ||| |||||||| ||  ||||| |||| ||| |||||||||||||||||||||||    
T  46645747 tatatgcaggggccggggttcgaaccccggacaccccactcctccacatttaaaatgtgtgagctcca 46645814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 10901700 - 10901750
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    |||||||| || |||||| |||||||| ||||||| |||||||||||||||    
T  10901700 gttcgaacccctaacaccccacttctccacatttataatgtgtgagctcca 10901750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 13702063 - 13702137
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||| ||| ||  ||||| |||| ||| ||||||||||||||||||||||| ||||||    
T  13702063 tatatgcaggggccggggttcaaaccccggacaccccactcctccacatttaaaatgtgtgagctccagccacta 13702137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 35005465 - 35005511
Alignment:
Q  65 ccaaacacctcacttctctacatttaaaatgtgtgagctccaaccac 111  Q
    |||||||| |||||||||||  ||||||||||||||||| |||||||    
T  35005465 ccaaacacttcacttctctatgtttaaaatgtgtgagcttcaaccac 35005511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 36114380 - 36114303
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaacca 110  Q
    |||||| ||||||||  || ||| |||||||| ||||| | |||||||||| ||||||||| ||||||||||| |||||    
T  36114380 tgcatattatatgcagcggtcggggttcgaaccccaaatatctcacttctccacatttaaa-tgtgtgagctctaacca 36114303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 12428221 - 12428294
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactcc-aaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| |||  || ||||||||||| |||||||  ||||||| ||||||||||||| |||||||    
T  12428221 tgcatattatatgcaggggttggggttcgaactcccaaacacccaacttctccacatttaaaatgtatgagctc 12428294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 21402828 - 21402795
Alignment:
Q  71 acctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||||||||| |||||||||||||||||||||    
T  21402828 acctcacttctccacatttaaaatgtgtgagctc 21402795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 30388546 - 30388465
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||| ||||  |||||||| ||| ||||| ||||||||||| | ||||||    
T  30388546 tgcatattatatgcaggggccggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctagccacta 30388465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 38697268 - 38697297
Alignment:
Q  84 acatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||||||||||||||||||||    
T  38697268 acatttaaaatgtgtgagctccaaccacta 38697297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Original strand, 40436392 - 40436425
Alignment:
Q  83 tacatttaaaatgtgtgagctccaaccactatgt 116  Q
    |||||||||||||||||||||||| |||||||||    
T  40436392 tacatttaaaatgtgtgagctccagccactatgt 40436425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 4232597 - 4232561
Alignment:
Q  77 cttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  4232597 cttctccacatttaaaatgtatgagctccaaccacta 4232561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 50376688 - 50376615
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcca 106  Q
    ||||||||||||||| |||| || |||||||| |||||||| |||||| || |||||||||||||||||||||||    
T  50376688 tgcataatatatgcaggggaaggggttcgaaccccaaacacttcactt-tccacatttaaaatgtgtgagctcca 50376615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 30305837 - 30305911
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| |||  || |||||||| ||  |||||||||||||| ||||||||||||||||||||||| ||||||    
T  30305837 tatatgcaggggctggggttcgaaccccggacacctcacttctccacatttaaaatgtgtgagctccagccacta 30305911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 36099215 - 36099141
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  36099215 tatatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccacta 36099141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 624511 - 624592
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| |||||| |||  || |||||||| ||  ||||| |||||||| ||||||||||||||||||||| ||||||||    
T  624511 tgcataatttatgcaggggcaggggttcgaacccctgacaccccacttctccacatttaaaatgtgtgagctctaaccacta 624592  T

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Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 8965125 - 8965206
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||||||| ||||| ||||||||||| ||||||||    
T  8965125 tgcatattatatgcaggggccggggttcgaaccccggacaccccacttctctacaattaaattgtgtgagctctaaccacta 8965206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 10402472 - 10402553
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| |||||||||||| ||  |||||||||||||| ||| ||||| ||||||||||| | ||||||    
T  10402472 tgcatattatatgcaggggtcggagttcgaaccccggacacctcacttctccacaattaaattgtgtgagctctagccacta 10402553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 11375928 - 11375856
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| ||| ||| |||||||| ||  |||||||||||||| ||| |||||||||||||||||    
T  11375928 tgcatattatatgcaggggccggggttcgaaccccggacacctcacttctccacaattaaaatgtgtgagctc 11375856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 5440594 - 5440517
Alignment:
Q  26 gggacgtgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagct 103  Q
    ||||| || |||||||||||| |||| |  |||||||| ||||||||| ||| | ||||||||||| |||||||||||    
T  5440594 gggacatgaataatatatgcaggggatgaggttcgaaccccaaacaccccacatttctacatttaacatgtgtgagct 5440517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 29406388 - 29406468
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| |||||| ||| ||| |||||||||||  ||| | |||||||| |||||| || ||||||||||||||||||||    
T  29406388 tgcataatttatgcaggggtcggggttcgaactccggacaacccacttctccacattt-aattgtgtgagctccaaccacta 29406468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 37868606 - 37868525
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| |||  |||||||||||  |  |||||||||||||| ||| ||||| ||||||||||| ||||||||    
T  37868606 tgcatattatatgcaggggctggagttcgaacctcggacacctcacttctccacaattaaattgtgtgagctctaaccacta 37868525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 47890726 - 47890807
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||| ||||  |||||||| ||| ||||| ||||||||||| ||||||||    
T  47890726 tgcatattatatgcaggggtcggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctaaccacta 47890807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 7043939 - 7043987
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||||||||| || ||||||||||| ||||||||||||| |||||||    
T  7043939 gttcgaactccagactcctcacttctccacatttaaaatgtatgagctc 7043987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 4513441 - 4513398
Alignment:
Q  70 cacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||| |||||||||||||||||||||  |||||||    
T  4513441 cacctcacttctccacatttaaaatgtgtgagctctgaccacta 4513398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 16589411 - 16589372
Alignment:
Q  74 tcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  16589411 tcacttatttacatttaaaatgtgtgagctccaaccacta 16589372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 23778862 - 23778783
Alignment:
Q  34 cataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||| |||||||| |||  || |||||||| ||| ||||| |||||||| ||| ||||| ||||||||||| ||||||||    
T  23778862 catattatatgcaggggttggggttcgaaccccagacaccccacttctccacaattaaattgtgtgagctctaaccacta 23778783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 97
Target Start/End: Original strand, 39489851 - 39489882
Alignment:
Q  66 caaacacctcacttctctacatttaaaatgtg 97  Q
    ||||||||||||||||||||||||||||||||    
T  39489851 caaacacctcacttctctacatttaaaatgtg 39489882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 2860730 - 2860680
Alignment:
Q  73 ctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttga 123  Q
    |||||||||| | ||||||||||||||||||| |  |||||||||||||||    
T  2860730 ctcacttctccatatttaaaatgtgtgagctcaagtcactatgttatttga 2860680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 23176753 - 23176680
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||| || ||||| ||||||||||||||||||||||| ||||||    
T  23176753 tatatgcaggggtcggggttcgaaccccggacacccca-ttctccacatttaaaatgtgtgagctccagccacta 23176680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 28715728 - 28715802
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||  |||||||| |||||||||||||||||||| || ||||||    
T  28715728 tatatgcaggggccggggttcgaaccccggacactccacttctccacatttaaaatgtgtgagcttcagccacta 28715802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 2870939 - 2870995
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| |||||||||| ||||||| | |||||| ||||||||||| |||||||||    
T  2870939 gttcgaaccccaaacacct-acttctccaaatttaatatgtgtgagcttcaaccacta 2870995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 3784966 - 3785022
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| || |||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  3784966 gttcgaaccccgaacaccacacttctccacatttaaa-tgtgtgagctccagccacta 3785022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 30057253 - 30057334
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||| ||| ||  ||||| |||||||| ||| ||||| ||||||||||| ||||||||    
T  30057253 tgcatattatatgcaggggtcggggttcaaaccccggacaccccacttctccacaattaaattgtgtgagctctaaccacta 30057334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 39401032 - 39401105
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcc 105  Q
    ||||||||||||||| ||| || ||||| ||| |  |||||| |||||||| ||||| || |||||||||||||    
T  39401032 tgcataatatatgcaggggtcgaagttcaaaccctgaacaccacacttctccacattaaatatgtgtgagctcc 39401105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 42134496 - 42134415
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||||||  ||||| |||||||| ||| ||||| | ||||||||| | ||||||    
T  42134496 tgcatattatatgcaagggtcggggttcgaactccggacaccccacttctccacaattaaattatgtgagctctagccacta 42134415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 44568258 - 44568178
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||||| | |||||||||||||| | |||| || ||||||||||| | ||||||    
T  44568258 tgcatattatatgcaggggtcggggttcgaactcgagacacctcacttctccatattt-aattgtgtgagctcaagccacta 44568178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 45304022 - 45303942
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||||| |||  | ||||||||| ||  ||||| |||||||| ||||| |||||||||||| |||| ||||||    
T  45304022 tgcataatatatgcaagggttgaagttcgaac-ccggacaccccacttctccacattaaaaatgtgtgagttccagccacta 45303942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 55021585 - 55021666
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  |||| ||||||||| ||| ||||| ||||||||||| | ||||||    
T  55021585 tgcatattatatgcaggggtcggggttcgaaccccggacacttcacttctccacaattaaattgtgtgagctctagccacta 55021666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 3039215 - 3039167
Alignment:
Q  65 ccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||| |||||||||  | |||||||||||||||||| |||||||||    
T  3039215 ccaaacagctcacttcttcatatttaaaatgtgtgagcttcaaccacta 3039167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 3161090 - 3161134
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||| ||||||||| |||||||||||||||||||| || ||||||    
T  3161090 acacttcacttctccacatttaaaatgtgtgagctacagccacta 3161134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 32339355 - 32339427
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| ||| ||| |||| ||| ||| ||||| ||||||| | |||||||||||| |||||||    
T  32339355 tgcatattatatgcaagggtcggggttcaaaccccagacaccccacttctttgcatttaaaatgtctgagctc 32339427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 37442075 - 37442031
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||| |||||||||| ||||||||| ||||||||||| ||||||    
T  37442075 acaccgcacttctctatatttaaaatttgtgagctccagccacta 37442031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 38848150 - 38848079
Alignment:
Q  41 tatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| ||| ||| |||||||| ||  ||||| |||||||| ||||||||| ||||||||||| ||||||||    
T  38848150 tatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaa-tgtgtgagctctaaccacta 38848079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 45665070 - 45665002
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtga 100  Q
    ||||||||||||||| ||  ||| |||||||| ||||||| | |||||||| ||||| || ||||||||    
T  45665070 tgcataatatatgcagggaccggtgttcgaaccccaaacatcccacttctccacattaaatatgtgtga 45665002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 47586290 - 47586330
Alignment:
Q  73 ctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||||| ||||||||||||||||||||| || |||||    
T  47586290 ctcacttctccacatttaaaatgtgtgagctcaaatcacta 47586330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 49056806 - 49056878
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| | | |||||||||||| ||  ||||| |||||||| ||| ||||| |||||||||||    
T  49056806 tgcatattatatgcaggagccggagttcgaaccccggacaccccacttctccacaattaaattgtgtgagctc 49056878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 54215816 - 54215864
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||||| ||| ||||| |||||||| ||||||||||| |||||||||    
T  54215816 gttcgaaccccagacaccccacttctccacatttaaaatatgtgagctc 54215864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 18904303 - 18904377
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  18904303 tatatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccacta 18904377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 32621614 - 32621540
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||  ||| ||||| |||||||| ||||||||||||||||||||||| ||||||    
T  32621614 tatatgcaggggccggggttcgaatcccagacaccccacttctccacatttaaaatgtgtgagctccagccacta 32621540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 3709890 - 3709971
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| |||  || |||||||| ||| ||||| |||||||| |||||||||||||| |||||||| ||||||    
T  3709890 tgcatattatatgcaaggggtggggttcgaaccccagacaccccacttctccacatttaaaatgtgagagctccagccacta 3709971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 6196388 - 6196307
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||| | ||| | | |||||||||||| ||| |||||||||| || |||||||||||||||||  ||||||||    
T  6196388 tgcataatatatgtaggggtccgggttcgaactccatacatctcacttctccacgtttaaaatgtgtgagctttaaccacta 6196307  T

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Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 1368202 - 1368134
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||| ||||||| ||||| |||||||| ||||||||||||||||||||||| | |||| |||| |||||    
T  1368202 gttcaaactccagacaccccacttctccacatttaaaatgtgtgagctccagcgactaagttacttgac 1368134  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 2044633 - 2044587
Alignment:
Q  78 ttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||    
T  2044633 ttctctacatttaaaatgtgtgagcttcaaccactatgctacttgac 2044587  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 31980965 - 31980919
Alignment:
Q  65 ccaaacacctcacttctctacatttaaaatgtgtgagctccaaccac 111  Q
    |||||||||||||||||| |  |||||||||||||||||||||||||    
T  31980965 ccaaacacctcacttctccatgtttaaaatgtgtgagctccaaccac 31980919  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 32142051 - 32141994
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||||| ||||| || ||||||||||||||||||||||| ||||||    
T  32142051 gttcgaaccccagacaccccacttttccacatttaaaatgtgtgagctccagccacta 32141994  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 20846077 - 20846145
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtga 100  Q
    |||||||||||||||  ||  || |||||||| | | ||||| ||||||||||||||||||||||||||    
T  20846077 tgcataatatatgcagtggttggggttcgaaccctatacaccacacttctctacatttaaaatgtgtga 20846145  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 29646749 - 29646709
Alignment:
Q  73 ctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  29646749 ctcacttctctacatttaaaatgtgtgagcttcaactacta 29646709  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 32616452 - 32616496
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||    
T  32616452 acaccccacttctctgcatttaaaatgtgtgagctccagccacta 32616496  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 361218 - 361277
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatg 115  Q
    |||||||||||| ||||| |||||||| | ||||||||| ||||||||| | ||||||||    
T  361218 gttcgaactccagacaccccacttctccatatttaaaatatgtgagctctagccactatg 361277  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 8297665 - 8297739
Alignment:
Q  39 tatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||| ||||| ||||||||||| ||||||||    
T  8297665 tatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctaaccacta 8297739  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 31886430 - 31886500
Alignment:
Q  35 ataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctcc 105  Q
    |||||||||||  ||| || ||||| |||  |||||||  ||||||||||||||||| |||||||||||||    
T  31886430 ataatatatgcgggggtcgtagttcaaacctcaaacactccacttctctacatttaatatgtgtgagctcc 31886500  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 7545360 - 7545441
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| | | |||||||| || |||||| |||||||| ||| ||||| ||||||||||| | ||||||    
T  7545360 tgcatattatatgcaggggccagggttcgaaccccgaacaccccacttctccacaattaaattgtgtgagctctagccacta 7545441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 24878216 - 24878163
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttg 122  Q
    ||||| |||||||| |||||| |||||||||||||| ||| |||||| ||||||    
T  24878216 acaccccacttctccacatttcaaatgtgtgagctctaacaactatgctatttg 24878163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 2711485 - 2711553
Alignment:
Q  56 gttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccactatgttatttgac 124  Q
    |||||||||||  ||||| ||||||||  |||||||||  |||||||||||  ||||| ||||||||||    
T  2711485 gttcgaactccggacaccccacttctccgcatttaaaagttgtgagctccagtcactaggttatttgac 2711553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 28021300 - 28021344
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    ||||| |||||||| ||||||| ||||||||||||||| ||||||    
T  28021300 acaccccacttctccacatttataatgtgtgagctccagccacta 28021344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 32050004 - 32049932
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctc 104  Q
    |||||| |||||||| | | ||| ||||||||||| |||||  |||||||| ||| ||||| |||||||||||    
T  32050004 tgcatattatatgcaggagccggggttcgaactccgaacactccacttctccacaattaaattgtgtgagctc 32049932  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 39870 - 39911
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaacca 110  Q
    |||||||||| |||||||||||||||||||||| || |||||    
T  39870 acacctcactcctctacatttaaaatgtgtgagttctaacca 39911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 10865 - 10784
Alignment:
Q  32 tgcataatatatgcacgggacggagttcgaactccaaacacctcacttctctacatttaaaatgtgtgagctccaaccacta 113  Q
    |||||| |||||||| ||| ||| |||||||| ||  ||||| |||||||| ||| ||||| ||||||||||| | ||||||    
T  10865 tgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccacta 10784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 74942 - 74901
Alignment:
Q  69 acacctcacttctctacatttaaaatgtgtgagctccaacca 110  Q
    |||||||||| |||||||||||||||||||||| || |||||    
T  74942 acacctcactcctctacatttaaaatgtgtgagttctaacca 74901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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