View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14341_high_1 (Length: 684)
Name: NF14341_high_1
Description: NF14341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14341_high_1 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 609; Significance: 0; HSPs: 33)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 609; E-Value: 0
Query Start/End: Original strand, 11 - 669
Target Start/End: Complemental strand, 39138757 - 39138098
Alignment:
| Q |
11 |
cagagaattttcagtatttttcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatc |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |
|
|
| T |
39138757 |
cagagaattttcagtatttttcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcaggtttaatcttcggtgagattctcatc |
39138658 |
T |
|
| Q |
111 |
agttgttctagcagaaagatgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaa |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39138657 |
agttgttctagcagaaagatgcagccatcatcaataatcacagcatgttctccattcttacaccgtggaataattggcttctgtattatatccaaaacaa |
39138558 |
T |
|
| Q |
211 |
cttttgctggatctgatgattcttgcagattaactagaatgacagtttcatcacttgggagcaactgcaaacttgttccatcaatggttggacttaattg |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39138557 |
cttttgctggatctgatgattcttgcagattaactagaatgacagtttcatcacttgggagcaactgcaaacttgttccatcaatggttggacttaattg |
39138458 |
T |
|
| Q |
311 |
atcatccgtgttagatgcaactgcatatttggatagcagagaattaagatccctcatatttttagaagcaacagcaaatgaagatgacaataggattttt |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39138457 |
atcatccgtgttagatgcaactgcatatttggatagcagagaattaagatccctcatatttttagaagcaacagcaaatgaagatgacaataggattttt |
39138358 |
T |
|
| Q |
411 |
ggaatgtatgggtgagagagggaatcattatattaattgttataatcaaagtcaatatagaagcttaactgaatcaccaaagatagcgttaaattgatta |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
39138357 |
ggaatgtatgggtgagagagggaatcattatattaattgttataatcaaagtcaatatagaagcttaactgaatcaccaaagatagtgttaaattgatta |
39138258 |
T |
|
| Q |
511 |
ataattataaacaa---ttgaaatagtccaaattagtttgacagtgtgtccgtatgtgtgatataaaaactggtcaaagcttttcaacttgactaagagt |
607 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39138257 |
ataattataaacaagacttgaaatagtccaaattagtttgacagtgtgtccgtatgtgtgatataaaaactggtcaaagcttttcaacttgactaagagt |
39138158 |
T |
|
| Q |
608 |
aagataagatatactgcaattttttgatagtgtatctgtatgggtgtgatatatatactaca |
669 |
Q |
| |
|
||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
39138157 |
aagataagatatactacaattttttg--agtgtgtctgtatgggtgtgatatatatactaca |
39138098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 14 - 368
Target Start/End: Complemental strand, 39153170 - 39152813
Alignment:
| Q |
14 |
agaattttcagtatttt---tcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatc |
110 |
Q |
| |
|
||||||||||||||||| | || |||||||||| || | |||| || ||||||||||||||||||||| | |||||||||||||||||||||| ||| |
|
|
| T |
39153170 |
agaattttcagtattttcttttattttagctttcaaatcatgtgcgagtttcaatgcttcttctcttacacaaggtttaatcttcggtgagattctcatc |
39153071 |
T |
|
| Q |
111 |
agttgttctagcagaaagatgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaa |
210 |
Q |
| |
|
||||||||||||||||||||||||| | |||| ||||| |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
39153070 |
agttgttctagcagaaagatgcagctaccatctataatcacagcatggtctccgttcttataccgtggaataattgggttctgtattatatccaacacaa |
39152971 |
T |
|
| Q |
211 |
cttttgctggatctgatgattcttgcagattaactagaatgacagtttcatcacttgggagcaactgcaaacttgttccatcaatggttggacttaattg |
310 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||| | ||| |||||||||||||||||||||||||||||||||||| || || || | || |
|
|
| T |
39152970 |
tttttgctggatctgatgattcttgcaggttatctagaatgtcgcttttatcacttgggagcaactgcaaacttgttccatcaatagtagggctaatttc |
39152871 |
T |
|
| Q |
311 |
atcatccgtgttagatgcaactgcatatttggatagcagagaattaagatccctcata |
368 |
Q |
| |
|
||||||| ||| ||||| | |||||||||| |||| |||| | ||||| || |||||| |
|
|
| T |
39152870 |
atcatccatgtaagatgtagctgcatatttagatatcagatatttaagctctctcata |
39152813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 14 - 368
Target Start/End: Original strand, 39472835 - 39473198
Alignment:
| Q |
14 |
agaattttcagtatttt---tcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttc------ggtgagatt |
104 |
Q |
| |
|
||||||||||||||||| |||||||| |||||| || |||||| ||||||||||| |||| | ||||| | | |||||||| ||||||||| |
|
|
| T |
39472835 |
agaattttcagtattttctttcatgttaactttcaaatcaagtgcgagcttcaatgcgtctttttttacacaagggctaatcttcagtgacggtgagatt |
39472934 |
T |
|
| Q |
105 |
ctaatcagttgttctagcagaaagatgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatcca |
204 |
Q |
| |
|
| ||||| ||||| | |||||||||| || | |||||||||| |||||||| ||||| |||||||||||||||||||| || ||| |||||||||||| |
|
|
| T |
39472935 |
ttcatcagctgttccaacagaaagatgttgctaccatcaataatcacagcatggtctcccttcttacaccgtggaataatcgggttcagtattatatcca |
39473034 |
T |
|
| Q |
205 |
aaacaacttttgctggatctgatgattcttgcagattaactagaatgacagtttcatcacttgggagcaactgcaaacttgttccatcaatggttggact |
304 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
39473035 |
gaacaaattttgctggatctgatgattcttgcagatcaactagaatgtcagtttcatcacttgggagcaactgcaaacttgtttcatcagtggttggact |
39473134 |
T |
|
| Q |
305 |
taattgatcatccgtgttagatgcaactgcatatttggatagcagagaattaagatccctcata |
368 |
Q |
| |
|
||||||||||||| ||| ||||| | |||||||||| ||||||||| | ||||| ||||||||| |
|
|
| T |
39473135 |
taattgatcatccatgtaagatgtagctgcatatttagatagcagatatttaagctccctcata |
39473198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 33 - 340
Target Start/End: Complemental strand, 39604405 - 39604098
Alignment:
| Q |
33 |
atgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaagatgc |
132 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| |||||||||||||||| | ||||||| | ||| |||||| |||||||||| ||||||| ||| |
|
|
| T |
39604405 |
atgttagatttcaaattaagtgctagcttcattgcttcttctcttacacgaggtttaatatgtggtttgattctcatcagttgtttgagcagaagaatgt |
39604306 |
T |
|
| Q |
133 |
agccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatgattc |
232 |
Q |
| |
|
| |||||||||||| ||||||| ||||| ||||| || | ||||||| || |||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
39604305 |
ctctatcatcaataattacagcattgtctcccatcttatacttttgaataatgggattctgtattatatccaaaacaacttttgatggatctgatgatcc |
39604206 |
T |
|
| Q |
233 |
ttgcagattaactagaatgacagtttcatcacttgggagcaactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaact |
332 |
Q |
| |
|
|||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||| || |||||||||| |||| | ||| |||| |
|
|
| T |
39604205 |
ttgcagattatctagaatttcagtttcgtcacttgggagcaactgcaaacttcttccatcaatggtaggagttgattgatcatctgtgtaacatgtaact |
39604106 |
T |
|
| Q |
333 |
gcatattt |
340 |
Q |
| |
|
|||||||| |
|
|
| T |
39604105 |
gcatattt |
39604098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 14 - 345
Target Start/End: Original strand, 44895178 - 44895512
Alignment:
| Q |
14 |
agaattttcagtattt---ttcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatc |
110 |
Q |
| |
|
|||||||||||||||| || ||||||||||| | ||| |||||||||||||||||| |||||||||| | ||||||| | ||||| |||| ||| |
|
|
| T |
44895178 |
agaattttcagtatttccttttatgttagctttgaatttatgtgctagcttcaatgcttgttctcttacacgaggtttaataattggtgacattcccatc |
44895277 |
T |
|
| Q |
111 |
agttgttctagcagaaagatgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaa |
210 |
Q |
| |
|
||| |||||||||| |||||| | ||||||||||| | | ||| || | ||||||| | |||| ||| | || |||||||||||||||||||||| |
|
|
| T |
44895278 |
agtgtttctagcagatagatgcgccaatcatcaataaccaaatcattgtcatccttcttactcagtggcatactagggttctgtattatatccaaaacaa |
44895377 |
T |
|
| Q |
211 |
cttttgctggatctgatgattcttgcagattaactagaatgacagtttcatcacttgggagcaactgcaaacttgttccatcaatggttggacttaattg |
310 |
Q |
| |
|
|||||| |||| |||||||||| ||||| |||||||||| || ||| |||||||||||||| ||||||||||||||| ||||||| | |||||||| |
|
|
| T |
44895378 |
gttttgcaggatttgatgattctcgcagagtaactagaatttcattttgctcacttgggagcaattgcaaacttgttccaccaatggtacggcttaattg |
44895477 |
T |
|
| Q |
311 |
atcatccgtgttagatgcaactgcatatttggata |
345 |
Q |
| |
|
||||||| ||||||||| |||||||||||| |||| |
|
|
| T |
44895478 |
atcatccatgttagatgtaactgcatatttagata |
44895512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 48 - 340
Target Start/End: Complemental strand, 39099661 - 39099369
Alignment:
| Q |
48 |
ttaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaagatgcagccatcatcaataa |
147 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||| | |||| || | ||||||||||| ||||||||||| ||||||| ||| | |||||||||| |
|
|
| T |
39099661 |
ttaagtgccagcttcatcgcttcttctcttacacaaggtttgatatgtggtgagattctcatcagttgttcgagcagaagaatgtctctttcatcaataa |
39099562 |
T |
|
| Q |
148 |
tgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatgattcttgcagattaactag |
247 |
Q |
| |
|
| ||||||| ||||| ||||| || | ||||||| || |||||||||||||||||||| ||||||| |||||||||| || ||||||||||| |||| |
|
|
| T |
39099561 |
ttacagcattgtctcccatcttatacttttgaataatgggattctgtattatatccaaaacgacttttgatggatctgataatccttgcagattatctag |
39099462 |
T |
|
| Q |
248 |
aatgacagtttcatcacttgggagcaactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcatattt |
340 |
Q |
| |
|
||| ||||||| |||||||||||||||| ||||||| ||||||||||||| ||| || |||||||||| |||| | | | |||||||||||| |
|
|
| T |
39099461 |
aatttcagtttcgtcacttgggagcaacttcaaacttcttccatcaatggtaggagttgattgatcatctgtgtaacaagtaactgcatattt |
39099369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 33 - 222
Target Start/End: Original strand, 39380587 - 39380776
Alignment:
| Q |
33 |
atgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaagatgc |
132 |
Q |
| |
|
|||| |||||||| || |||||||||| ||| |||||||||||||||| || || ||| |||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
39380587 |
atgtaagctttcaaatcaagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgc |
39380686 |
T |
|
| Q |
133 |
agccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggat |
222 |
Q |
| |
|
|| ||||| || ||| ||||||| ||||| ||||| ||| ||||| |||| || || ||||||||||| ||||||||||||||||||| |
|
|
| T |
39380687 |
ggctatcataaaaaatcacagcattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggat |
39380776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 267
Target Start/End: Complemental strand, 44624891 - 44624634
Alignment:
| Q |
16 |
aattttcagtatttt---tcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcag |
112 |
Q |
| |
|
||||||||||||||| ||||||||||||||| | | | ||||||||||||||||| ||||||||| | ||||||| || ||||||||| | ||||| |
|
|
| T |
44624891 |
aattttcagtattttctttcatgttagctttcaactcacgcgctagcttcaatgcttcatctcttacacaaggtttaatatttggtgagattgtcatcag |
44624792 |
T |
|
| Q |
113 |
ttgttctagcagaaagatgcagc---catcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaaca |
209 |
Q |
| |
|
|| |||||||||| |||||| || ||||||||||||| ||||| | ||||| |||||| |||| ||||| || ||| ||||||||||||||||| |
|
|
| T |
44624791 |
tttttctagcagatagatgcggctttcatcatcaataatcacagctttgtctcctttcttaggaagtgggataatggggttcagtattatatccaaaaca |
44624692 |
T |
|
| Q |
210 |
acttttgctggatctgatgattcttgcagattaactagaatgacagtttcatcacttg |
267 |
Q |
| |
|
| |||||||||||||||||||||| ||| |||| | |||||| || |||| ||||||| |
|
|
| T |
44624691 |
atttttgctggatctgatgattctcgcaaattatcaagaatgtcaatttcctcacttg |
44624634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 33 - 240
Target Start/End: Original strand, 39493532 - 39493739
Alignment:
| Q |
33 |
atgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaagatgc |
132 |
Q |
| |
|
||||||||||||| || |||||||||||||| |||||||||| |||||| | || |||| | ||||||||| | |||||| ||| ||||||| ||| |
|
|
| T |
39493532 |
atgttagctttcatatcaagtgctagcttcattgcttcttcttttacatgaggtctaatatctggtgagattttcctcagttcttcgagcagaagaatgt |
39493631 |
T |
|
| Q |
133 |
agccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatgattc |
232 |
Q |
| |
|
|| |||||||||||| |||||| ||||| |||||||| | |||||| || |||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
39493632 |
ggctatcatcaataattgcagcatcgtctcctatcttacactttttaataatggggttctgtattatatccaaaacaacttttgatggatctgatgatcc |
39493731 |
T |
|
| Q |
233 |
ttgcagat |
240 |
Q |
| |
|
|||||||| |
|
|
| T |
39493732 |
ttgcagat |
39493739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 39196581 - 39196816
Alignment:
| Q |
14 |
agaattttcagtatttt---tcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatc |
110 |
Q |
| |
|
||||||||||||||| | ||||||||||||||| || || |||||||||||||||||||| ||| ||| | ||||||| | ||||||||||| ||| |
|
|
| T |
39196581 |
agaattttcagtattgtcattcatgttagctttcaaatcaaatgctagcttcaatgcttcttttctcacacaaggtttaatatctggtgagattctcatc |
39196680 |
T |
|
| Q |
111 |
agttgttctagcagaaagatgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaa |
210 |
Q |
| |
|
|||||||| |||||| |||| | |||| |||||| ||||||| ||||| || | ||| ||||||| || || ||| |||| || |||||||||| |
|
|
| T |
39196681 |
agttgttccagcagatagatttggtaatcaacaataaccacagcattatctcccttttcccactgtggaatgatggggttcagtatcatttccaaaacaa |
39196780 |
T |
|
| Q |
211 |
cttttgctggatctgatgattcttgcagattaacta |
246 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |
|
|
| T |
39196781 |
gttttgatggatctgatgattcttgcagattaacta |
39196816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 39396723 - 39396952
Alignment:
| Q |
14 |
agaattttcagtatttt---tcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatc |
110 |
Q |
| |
|
||||||||||||||||| | |||| |||| ||| || | |||||||||||| |||||||||||||||| | || |||| | ||||||||||| ||| |
|
|
| T |
39396723 |
agaattttcagtattttctctaatgtaagctctcaaatcatgtgctagcttcagtgcttcttctcttacacaaggtctaatagttggtgagattctcatc |
39396822 |
T |
|
| Q |
111 |
agttgttctagcagaaagatgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaa |
210 |
Q |
| |
|
|||| |||||||| ||||| || ||| ||||||| ||| ||| ||||| ||||||||| |||||||||| || || ||||||||||||||||||| |
|
|
| T |
39396823 |
agttcttctagcacgtagatgtggctatcctcaataaccacaccattgtctcccttcttacacagtggaataatggggttttgtattatatccaaaacaa |
39396922 |
T |
|
| Q |
211 |
cttttgctggatctgatgattcttgcagat |
240 |
Q |
| |
|
| ||| |||||||||||||||| |||||| |
|
|
| T |
39396923 |
gtcttgatggatctgatgattctagcagat |
39396952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 39371210 - 39370993
Alignment:
| Q |
29 |
tttcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaag |
128 |
Q |
| |
|
||||||||| ||||||| || ||||||||||||||||||||| ||||||||| | | | ||| || ||||||||| | || |||||||||||||| | | |
|
|
| T |
39371210 |
tttcatgttggctttcatatcaagtgctagcttcaatgcttcatctcttacacaaggctcaatatttggtgagattttcataagttgttctagcagcagg |
39371111 |
T |
|
| Q |
129 |
atgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatg |
228 |
Q |
| |
|
|| | |||| ||||||| ||| ||| ||||| ||||||| | |||||| ||| | |||||||| ||||||||||||| | ||| ||||||||||| |
|
|
| T |
39371110 |
atttggtaatcagcaataattacaacattgtctcccttcttactcagtggaacaatggtattctgtatcatatccaaaacaaatcttgatggatctgatg |
39371011 |
T |
|
| Q |
229 |
attcttgcagattaacta |
246 |
Q |
| |
|
||||| |||||| ||||| |
|
|
| T |
39371010 |
attctagcagatcaacta |
39370993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 39 - 251
Target Start/End: Complemental strand, 39144679 - 39144467
Alignment:
| Q |
39 |
gctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaagatgcagccat |
138 |
Q |
| |
|
||||||| || |||||||||||||| |||||||||| |||||| | ||||||| | |||||||| | |||||| | ||||||| ||| || || |
|
|
| T |
39144679 |
gctttcaaatcaagtgctagcttcattgcttcttcttttacatgaggtttaatatctagtgagattttcctcagttccttgagcagaagaatgtggctat |
39144580 |
T |
|
| Q |
139 |
catcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatgattcttgcag |
238 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||||| | |||||| || |||||||||||||||||||||||||||| ||||||||||||| |||| || |
|
|
| T |
39144579 |
catcaataattacagcatcgtctcctatcttacactttttaataatcgggttctgtattatatccaaaacaacttttgatggatctgatgatccttgaag |
39144480 |
T |
|
| Q |
239 |
attaactagaatg |
251 |
Q |
| |
|
|||| | |||||| |
|
|
| T |
39144479 |
attaccaagaatg |
39144467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 33 - 230
Target Start/End: Complemental strand, 2362768 - 2362574
Alignment:
| Q |
33 |
atgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaagatgc |
132 |
Q |
| |
|
|||| ||||||||| |||||||||||||||| ||||||||||| |||| | |||||| | ||||||||||| ||||||||||| |||||| ||| |
|
|
| T |
2362768 |
atgtaagctttcagtttaagtgctagcttcattgcttcttctcgcacatgaggtttaacatgtggtgagattctcatcagttgttcgagcagatcaatgt |
2362669 |
T |
|
| Q |
133 |
agccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatgat |
230 |
Q |
| |
|
| |||||||||||| ||| ||| |||||| ||||||| ||||||| || || ||||| |||||||| |||||| |||||| ||||||||||||| |
|
|
| T |
2362668 |
ggtgatcatcaataattacaacattttctcc---cttacactgtggaatgatggggttctggattatatctaaaacatcttttgatggatctgatgat |
2362574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 272 - 379
Target Start/End: Original strand, 39380832 - 39380939
Alignment:
| Q |
272 |
caactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcatatttggatagcagagaattaagatccctcatattt |
371 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||| |||||||| ||| |||||||||||||||||| ||||||||| | ||||| |||||||||||| |
|
|
| T |
39380832 |
caactgcaaacttgttcccccaatggtatgacttaatcgatcatccatgtaagatgcaactgcatatttagatagcagatatttaagctccctcatattt |
39380931 |
T |
|
| Q |
372 |
ttagaagc |
379 |
Q |
| |
|
||||||| |
|
|
| T |
39380932 |
atagaagc |
39380939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 96 - 251
Target Start/End: Complemental strand, 44615432 - 44615277
Alignment:
| Q |
96 |
ggtgagattctaatcagttgttctagcagaaagatgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgta |
195 |
Q |
| |
|
||||||||| | |||||||||||||||||| |||| ||||| ||||||||||| || || | ||||| |||||| | ||||||| | || || ||| |
|
|
| T |
44615432 |
ggtgagattatcatcagttgttctagcagatagatccagccttcatcaataatcaccgctttgtctcctttcttaggcagtggaatcgtagggtttagta |
44615333 |
T |
|
| Q |
196 |
ttatatccaaaacaacttttgctggatctgatgattcttgcagattaactagaatg |
251 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||| |||| |||||||| |
|
|
| T |
44615332 |
ttatatccaaaacaagttttgctggatctgatgattctcgcaaattatctagaatg |
44615277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 39216768 - 39216537
Alignment:
| Q |
14 |
agaattttcagtatttt---tcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatc |
110 |
Q |
| |
|
|||||||| |||||||| ||||||||| ||||| || || |||||||||||||||||||||||||||| | ||||||| | ||||||||| | ||| |
|
|
| T |
39216768 |
agaatttttagtattttcactcatgttagatttcaaatcaaatgctagcttcaatgcttcttctcttacacaaggtttaatatgaggtgagattttcatc |
39216669 |
T |
|
| Q |
111 |
agttgttctagcagaaagatgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaa |
210 |
Q |
| |
|
|||||||||||| | | || | |||| ||||||| ||||||| ||||| ||||||||| | ||||| | || |||||||| ||||||||||||| |
|
|
| T |
39216668 |
agttgttctagcgaataaatatggtaatcagcaataatcacagcattgtctcccttcttacacaattgaatagtagggttctgtatcatatccaaaacaa |
39216569 |
T |
|
| Q |
211 |
cttttgctggatctgatgattcttgcagatta |
242 |
Q |
| |
|
| ||| |||||||||||| ||| ||| |||| |
|
|
| T |
39216568 |
gtcttgatggatctgatgagtctagcaaatta |
39216537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 36 - 251
Target Start/End: Original strand, 39421279 - 39421494
Alignment:
| Q |
36 |
ttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaagatgcagc |
135 |
Q |
| |
|
|||||||||| || ||| || |||||||||||||||||| ||||| | |||||| | ||||||||| | |||||||||||||||||||||||| | |
|
|
| T |
39421279 |
ttagctttcaaatcaagagcgagcttcaatgcttcttcttttacacaagttttaatatgtggtgagattttcatcagttgttctagcagaaagatgtggt |
39421378 |
T |
|
| Q |
136 |
catcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatgattcttg |
235 |
Q |
| |
|
|| |||||||| || ||| ||||| |||||| || | ||||||| || ||||||||||||||||||||| | | |||||||||||| || |||| |
|
|
| T |
39421379 |
tctcttcaataatcgcatcattgtctcccttcttatacttttgaataatggggttctgtattatatccaaaacagcatgtgctggatctgaaaatccttg |
39421478 |
T |
|
| Q |
236 |
cagattaactagaatg |
251 |
Q |
| |
|
|||||| ||| ||||| |
|
|
| T |
39421479 |
cagattgacttgaatg |
39421494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 39188843 - 39189065
Alignment:
| Q |
29 |
tttcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaag |
128 |
Q |
| |
|
||||||||||||||| | || ||||||||| |||| ||| || |||||||||| | ||||||| | ||||||||||| |||||| | ||||||| |
|
|
| T |
39188843 |
tttcatgttagcttttaaatcaagtgctagtttcattgcatcctctcttacatgaggtttaatgtcaggtgagattctcatcagtactatgagcagaaga |
39188942 |
T |
|
| Q |
129 |
atgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatg |
228 |
Q |
| |
|
||| || |||||||||||| ||| ||| ||||| ||| |||| | ||||||| || |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
39188943 |
atgtggctatcatcaataattacaacattgtctcccatctcacacttttgaataatggggttctgtattatatccaaaacaacttttgaaggatctgata |
39189042 |
T |
|
| Q |
229 |
attcttgcagattaactagaatg |
251 |
Q |
| |
|
|| |||||| ||| ||| ||||| |
|
|
| T |
39189043 |
atccttgcaaattgacttgaatg |
39189065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 33 - 251
Target Start/End: Original strand, 39425626 - 39425844
Alignment:
| Q |
33 |
atgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaagatgc |
132 |
Q |
| |
|
||||||||||||| || |||||||| ||||| |||||||||| |||||||| || |||| | |||||||||||| | |||| | |||||| ||| |
|
|
| T |
39425626 |
atgttagctttcaaatcaagtgctaacttcattgcttcttcttttacatcaggtctaatatccggtgagattctcctaagttcattgagcagatgaatgt |
39425725 |
T |
|
| Q |
133 |
agccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatgattc |
232 |
Q |
| |
|
|| ||| |||||||| ||||||| ||||| |||||||| | |||||| || ||||||||||| |||||||||||||||| ||||||||| | | |
|
|
| T |
39425726 |
ggctatcctcaataataacagcatcatctcccatcttacactttttaataatagggttctgtattatttccaaaacaacttttgatggatctgaaaagcc |
39425825 |
T |
|
| Q |
233 |
ttgcagattaactagaatg |
251 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
39425826 |
ttgcagattacctagaatg |
39425844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 351
Target Start/End: Original strand, 39397008 - 39397087
Alignment:
| Q |
272 |
caactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcatatttggatagcagag |
351 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| | |||||| ||| ||||||||||||| ||| |||||||||| |
|
|
| T |
39397008 |
caactgcaaacttgttccatcaatggtaggacttaatcggtcatccatgtaggatgcaactgcatgtttagatagcagag |
39397087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 272 - 350
Target Start/End: Original strand, 39387850 - 39387928
Alignment:
| Q |
272 |
caactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcatatttggatagcaga |
350 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||| ||||||||||||| || |||||| |
|
|
| T |
39387850 |
caactgcaaacttgttccaccaatggtacgacttaattgatcatccatgtaagattcaactgcatatttagaaagcaga |
39387928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 39205813 - 39206048
Alignment:
| Q |
14 |
agaattttcagtatttt---tcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatc |
110 |
Q |
| |
|
||||||||||||||||| |||| |||||||||| | || ||||||||||||||||| |||||| ||| | ||| ||| ||||||||||| ||| |
|
|
| T |
39205813 |
agaattttcagtattttctttcatcttagctttcaagtcaaatgctagcttcaatgctttttctctcacacaaggttcaataactggtgagattctcatc |
39205912 |
T |
|
| Q |
111 |
agttgttctagcagaaagatgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaa |
210 |
Q |
| |
|
|||||||| |||||| | || | |||| ||||||| ||| ||| ||||| || | ||| ||||| | || || ||| |||| || |||||||||| |
|
|
| T |
39205913 |
agttgttcaagcagatatatttggtaatcagcaataatcacaacattatctcccttttggcacagtggagtgatggggttcagtatcatttccaaaacaa |
39206012 |
T |
|
| Q |
211 |
cttttgctggatctgatgattcttgcagattaacta |
246 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||| |
|
|
| T |
39206013 |
gttttgatggatctgctgattcttgcagattaacta |
39206048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 39223666 - 39223590
Alignment:
| Q |
170 |
acaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatgattcttgcagattaacta |
246 |
Q |
| |
|
|||||||||||| || || ||| |||| || |||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
39223666 |
acaccgtggaatgatggggttcagtatcatttccaaaacaagttttgatggatctgatgattcttgcagattaacta |
39223590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 271 - 380
Target Start/End: Complemental strand, 39370944 - 39370835
Alignment:
| Q |
271 |
gcaactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcatatttggatagcagagaattaagatccctcatatt |
370 |
Q |
| |
|
|||||||||||||||||||| ||| | | ||||||||||||||||| | | ||| |||||||||||||| |||| ||| ||||||| | ||||| ||| |
|
|
| T |
39370944 |
gcaactgcaaacttgttccaccaaagttacgacttaattgatcatccatataagacgcaactgcatatttagataatagataattaagctgcctcacatt |
39370845 |
T |
|
| Q |
371 |
tttagaagca |
380 |
Q |
| |
|
| |||||||| |
|
|
| T |
39370844 |
tatagaagca |
39370835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 39126575 - 39126482
Alignment:
| Q |
33 |
atgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaa |
126 |
Q |
| |
|
||||||| ||||| ||||| |||||||||| |||||||||||||||| | ||| ||| || |||||||||| ||||||||||| ||||||| |
|
|
| T |
39126575 |
atgttagatttcaatttaagagctagcttcattgcttcttctcttacacgaggttcaatatttagtgagattctcatcagttgttcgagcagaa |
39126482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 39387565 - 39387677
Alignment:
| Q |
14 |
agaattttcagtatttt---tcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgttt-aatcttcggtgagattctaat |
109 |
Q |
| |
|
||||||||||||||||| ||||||||||||| | || | | ||||||||||||||||||| | ||||| || |||| ||| || |||||| |||| || |
|
|
| T |
39387565 |
agaattttcagtattttctttcatgttagcttttaaatcacgcgctagcttcaatgcttctttttttaca-caagtttcaatttttggtgaggttctcat |
39387663 |
T |
|
| Q |
110 |
cagttgttctagca |
123 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
39387664 |
cagttgttctagca |
39387677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 256 - 337
Target Start/End: Complemental strand, 2362521 - 2362440
Alignment:
| Q |
256 |
tttcatcacttgggagcaactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcata |
337 |
Q |
| |
|
|||| ||| ||||||| |||||||||||| ||||||||||||| |||||| ||||||||| ||| ||||| || |||||| |
|
|
| T |
2362521 |
tttcctcaattgggagaaactgcaaacttcttccatcaatggtaggacttggttgatcatctgtgaaagatgaaattgcata |
2362440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 39421533 - 39421605
Alignment:
| Q |
266 |
tgggagcaactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcatat |
338 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||| |||| ||||||| ||| | ||| | |||||||| |
|
|
| T |
39421533 |
tgggagcaactgcaaacttgttccaacaatggcaggactaaattcatcatccatgtaacatgtatctgcatat |
39421605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 391
Target Start/End: Complemental strand, 39223540 - 39223422
Alignment:
| Q |
272 |
caactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcatatttggatagcagagaattaagatccctcatattt |
371 |
Q |
| |
|
||||||||||||| ||||| ||| || ||||| ||||||||| | ||| |||||||||||||||||| ||||| ||| | ||||| | | |||||||| |
|
|
| T |
39223540 |
caactgcaaacttattccaccaaaggcatgacttgattgatcatacatgtaagatgcaactgcatatttagatagtagatatttaagct-cttcatattt |
39223442 |
T |
|
| Q |
372 |
ttagaagcaacagcaaatga |
391 |
Q |
| |
|
||||| || ||| |||||| |
|
|
| T |
39223441 |
atagaaacatcagtaaatga |
39223422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 39413118 - 39413161
Alignment:
| Q |
29 |
tttcatgttagctttcagattaagtgctagcttcaatgcttctt |
72 |
Q |
| |
|
||||| ||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
39413118 |
tttcaagttagctttcaaatcaagtgctagcttcaatgcttctt |
39413161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 350
Target Start/End: Original strand, 39189091 - 39189188
Alignment:
| Q |
253 |
cagtttcatcacttgggagcaactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcatatttggatagcaga |
350 |
Q |
| |
|
|||||| ||||| |||||||||| ||||||| || |||||| ||| ||||||||||||| | | |||| |||| ||||||||| || | ||||||| |
|
|
| T |
39189091 |
cagtttgatcacatgggagcaacatcaaacttctttcatcaacggtgggacttaattgattacctgtgtacgatgtaactgcataattagctagcaga |
39189188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 380
Target Start/End: Original strand, 39196866 - 39196973
Alignment:
| Q |
272 |
caactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcatatttggatagcagagaattaagatccctcatattt |
371 |
Q |
| |
|
||||||||||||| ||||| ||| || | ||| ||||||| ||| ||| |||| ||||||||||||| ||||||||| | ||||| || | ||||||| |
|
|
| T |
39196866 |
caactgcaaacttcttccaccaaaggcacggcttgattgatcgtccatgtaagattcaactgcatatttagatagcagatatttaagctctc-catattt |
39196964 |
T |
|
| Q |
372 |
ttagaagca |
380 |
Q |
| |
|
|||||||| |
|
|
| T |
39196965 |
atagaagca |
39196973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 228 - 524
Target Start/End: Complemental strand, 19808388 - 19808093
Alignment:
| Q |
228 |
gattcttgcagattaactagaatgacagtttcatcacttgggagcaactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatg |
327 |
Q |
| |
|
|||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
19808388 |
gattcttgcagattgactagaatctcagtt-catcacttgggagcaactgcaaacttgttccatcaatggttggacttaatcgatcatccgtgctagatg |
19808290 |
T |
|
| Q |
328 |
caactgcatatttggatagcagagaattaagatccctcatatttttagaagcaacagcaaatgaagatgacaataggatttttggaatgtatgggtgaga |
427 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19808289 |
caactgcatatttggatagcagaggattaagatccctcatatttttagaaacaacagcaaatgaagatgacaaatggatttttggaatgtatgggtgaga |
19808190 |
T |
|
| Q |
428 |
gagggaatcattatattaattgttataatcaaagtcaatatagaagcttaactgaatcaccaaagatagcgttaaattgattaataattataaacaa |
524 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
19808189 |
gaggaaatcattatattaattgttatagtcaaagtcaatatagaagcttaactgaatcaccaaagacagtgttaaattgattaataattataaacaa |
19808093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 19809014 - 19808795
Alignment:
| Q |
11 |
cagagaattttcagtatttttcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatc |
110 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| || ||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| ||| |
|
|
| T |
19809014 |
cagagaattttcagtacttttcatgttagctttcaaatcaagtgctagcttcaatgtttcttctcttacaccaggtttaatcttcggtgagattctcatc |
19808915 |
T |
|
| Q |
111 |
agttgttctagcagaaagatgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaa |
210 |
Q |
| |
|
||||||||||||||||||| | || | |||||||| |||||||| ||||| | ||||| |||||||||||||| || ||||||||||||||||||| |
|
|
| T |
19808914 |
agttgttctagcagaaagacactgctaccatcaata---acagcatggtctccctcgttacatcgtggaataattgggttttgtattatatccaaaacaa |
19808818 |
T |
|
| Q |
211 |
cttttgctggatctgatgattct |
233 |
Q |
| |
|
|||||| |||||||||||||||| |
|
|
| T |
19808817 |
cttttgttggatctgatgattct |
19808795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 54 - 240
Target Start/End: Complemental strand, 16114435 - 16114249
Alignment:
| Q |
54 |
gctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaagatgcagccatcatcaataatgacag |
153 |
Q |
| |
|
|||||||||||||||| |||||||||| | ||||||| | ||||| ||||| ||||||| ||||| |||| ||||| || ||||||||||| |||| |
|
|
| T |
16114435 |
gctagcttcaatgctttttctcttacacgaggtttaatagttggtgatattctcatcagttcttctaacagatagatgtggcattcatcaataatcacag |
16114336 |
T |
|
| Q |
154 |
catgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatgattcttgcagat |
240 |
Q |
| |
|
||| ||||| ||||||||| ||||| || || |||||||||||||||||||||| | ||| |||||||| |||||||||||||| |
|
|
| T |
16114335 |
cattgtctcccttcttacacagtggagtaccggggttctgtattatatccaaaacaagtcttgatggatctgctgattcttgcagat |
16114249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 16114193 - 16114126
Alignment:
| Q |
272 |
caactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcatatt |
339 |
Q |
| |
|
||||||||||||||||| | |||| || ||||||| ||||||||| ||| ||||||||||||||||| |
|
|
| T |
16114193 |
caactgcaaacttgttctaccaattgtatgacttaactgatcatccatgtaagatgcaactgcatatt |
16114126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 33 - 267
Target Start/End: Complemental strand, 17060735 - 17060501
Alignment:
| Q |
33 |
atgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaagatgc |
132 |
Q |
| |
|
||||||||||||| | | ||||||||||||| ||||| ||| ||||| | |||||| || ||||| ||| | |||||||||||||||| |||||||| |
|
|
| T |
17060735 |
atgttagctttcaactcatgtgctagcttcaaagcttcgtcttttacacaagatttaatatttggtgacattatcatcagttgttctagcataaagatgc |
17060636 |
T |
|
| Q |
133 |
agccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatgattc |
232 |
Q |
| |
|
|| ||||||||||| ||| | | ||||| |||||| |||||||||| || ||| ||||| ||||||||||| ||||| |||||| |||||||| |
|
|
| T |
17060635 |
ggctttcatcaataatcacaactttgtctcccttcttaggtagtggaataatggggttcattattacatccaaaacaatttttgatggatccgatgattc |
17060536 |
T |
|
| Q |
233 |
ttgcagattaactagaatgacagtttcatcacttg |
267 |
Q |
| |
|
||||| ||||||||||||| ||| ||| ||||||| |
|
|
| T |
17060535 |
ttgcaaattaactagaatgtcagattcctcacttg |
17060501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 29 - 242
Target Start/End: Complemental strand, 33562382 - 33562169
Alignment:
| Q |
29 |
tttcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaag |
128 |
Q |
| |
|
||||||||||||||||| || || |||||||||||||||||||| ||| ||| | ||| ||| | ||||||||||| ||||||||||| || ||| || |
|
|
| T |
33562382 |
tttcatgttagctttcaaatcaaatgctagcttcaatgcttcttttctcacacaaggttcaatatctggtgagattctcatcagttgttccagaagatag |
33562283 |
T |
|
| Q |
129 |
atgcagccatcatcaataatgacagcatgttctccgttcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggatctgatg |
228 |
Q |
| |
|
|| | |||| ||||||||||| ||| ||||| || | |||| |||||| || || ||| |||| || |||||||||| ||||| ||||||||||| |
|
|
| T |
33562282 |
atttggtaatcaacaataatgacaacattgtctcccttttgacacagtggaaagatggggttcagtatcatttccaaaacaagttttgatggatctgatg |
33562183 |
T |
|
| Q |
229 |
attcttgcagatta |
242 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
33562182 |
attcttgcagatta |
33562169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 45343058 - 45342956
Alignment:
| Q |
29 |
tttcatgttagctttcagattaagtgctagcttcaatgcttcttctcttacatcatgtttaatcttcggtgagattctaatcagttgttctagcagaaag |
128 |
Q |
| |
|
||||| ||||||||||| | |||||||||||| |||||||||||||||||| | ||||||| | || ||||||| |||||||||||||| ||| || |
|
|
| T |
45343058 |
tttcacgttagctttcaactcaagtgctagcttgaatgcttcttctcttacacaaggtttaatacttggcaagattctcatcagttgttctaggagatag |
45342959 |
T |
|
| Q |
129 |
atg |
131 |
Q |
| |
|
||| |
|
|
| T |
45342958 |
atg |
45342956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 371
Target Start/End: Complemental strand, 45342837 - 45342745
Alignment:
| Q |
279 |
aaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcatatttggatagcagagaattaagatccctcatattt |
371 |
Q |
| |
|
|||| ||||||||||||||| | |||||||||||||||| ||| ||||| ||| ||||| ||||||||| | ||||| || ||||||||| |
|
|
| T |
45342837 |
aaacctgttccatcaatggtagtacttaattgatcatccatgtaagatgtgactaagtatttagatagcagatatttaagctctctcatattt |
45342745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 601
Target Start/End: Original strand, 44951044 - 44951110
Alignment:
| Q |
534 |
tccaaattagtttgacagtgtgtccgtatgtgtgatataaaaactggtcaaagcttttcaacttgact |
601 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||| |||||| | |||||||||||| ||||| |
|
|
| T |
44951044 |
tccaaattagtttgacagtgtgtgtgtgtgtgtgatatagaaactgcac-aagcttttcaacatgact |
44951110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 33151973 - 33151922
Alignment:
| Q |
265 |
ttgggagcaactgcaaacttgttccatcaatggttggacttaattgatcatc |
316 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |||||| ||||||||| |
|
|
| T |
33151973 |
ttgggagcaactgcaaacttcttccatcaatggtaggacttggttgatcatc |
33151922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 51575921 - 51575859
Alignment:
| Q |
189 |
ttctgtattatatccaaaacaacttttgctggatctgatgattcttgcagattaactagaatg |
251 |
Q |
| |
|
|||||||||||||||| |||| |||||| ||||||||| ||| || | ||||| ||||||||| |
|
|
| T |
51575921 |
ttctgtattatatccagaacatcttttgatggatctgaggatgctagaagattgactagaatg |
51575859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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