View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14343_high_32 (Length: 252)
Name: NF14343_high_32
Description: NF14343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14343_high_32 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 34438350 - 34438116
Alignment:
| Q |
1 |
atatattttatcatttgaagtaagacttgtattcagagaacccaaacatattaatggtaaacacttcttttaattccaataatgaaacaaaaacatgttg |
100 |
Q |
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|||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
34438350 |
atatattttatcatttgaagtaagacttttatttagagaacccaaacatattaatggtaaacacttcttttaataacaataatgaaacaaaaacatgttg |
34438251 |
T |
|
| Q |
101 |
tcattgcatgaacctaatgagatgaggactatacaagctttatgtggtagtaacaacaattactcattagaattggaaagggatgtaattctagcaggat |
200 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34438250 |
tcattgcatgaaactaatgagatgaggactatacaagctttatgtggtagtaacaacaattactcattagaattggaaagggatgtaattctagcaggat |
34438151 |
T |
|
| Q |
201 |
ctagacctttgtctctaggtgtcagagaccaatgc |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
34438150 |
ctagacctttgtctctaggtgtcagagaccaatgc |
34438116 |
T |
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