View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14343_low_20 (Length: 346)
Name: NF14343_low_20
Description: NF14343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14343_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 24 - 330
Target Start/End: Complemental strand, 104764 - 104458
Alignment:
| Q |
24 |
ttgcgccaataagtttcaaactcaaaagggtttgcttaatggatacaagcacaccttttgatgttgttaccatttttactattctcttattatcataccc |
123 |
Q |
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| T |
104764 |
ttgcgccaataagtttcaaactcaaaagggtttgcttaatggatacaagcacaccttttgatgttgttaccatttttactattctcttattatcataccc |
104665 |
T |
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| Q |
124 |
tttcgatatagcaaatgcaaactctgaaggtaagtaaagtacagtctcttttgttttgattgatacatacaaacaagcatacacataatctgaaagaaag |
223 |
Q |
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| T |
104664 |
ttttgatatagcaaatgcaaactctgaaggtaagtaaagtacagtctcttttgttttgattgatacatacaaacaagcatacacataatctgaaagaaag |
104565 |
T |
|
| Q |
224 |
aatcttttgttttgatgttctgtctgtctgtctgatgaaaactaacaggtgatgccttgtatgcattcagaagagctgtaaaagacccaaataacattct |
323 |
Q |
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| T |
104564 |
aatcttttgttttgatgttctgtctgtctgtctgatgaaaactaacaggtgatgccttgtatgcattcagaagagctgtaaaagacccaaataacattct |
104465 |
T |
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| Q |
324 |
acagagt |
330 |
Q |
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||||||| |
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| T |
104464 |
acagagt |
104458 |
T |
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