View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14344_low_8 (Length: 222)
Name: NF14344_low_8
Description: NF14344
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14344_low_8 |
 |  |
|
| [»] scaffold0112 (1 HSPs) |
 |  |  |
|
| [»] scaffold0014 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 106; Significance: 3e-53; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 27083338 - 27083197
Alignment:
| Q |
15 |
aatattgtaacctctgttccccgactgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcaga |
114 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
27083338 |
aatattgtaacctctgttcctcgactgttagataaggttaaattgttatccataggatgactgaaagttaaaaatgtcatgtttgtttttcgtactcaga |
27083239 |
T |
 |
| Q |
115 |
ggtggtgatcaagccctttaacttgtccttgcattgactaac |
156 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
27083238 |
ggtggtgatcaagccctttagcttgtctgtgcattgactaac |
27083197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 27083133 - 27083083
Alignment:
| Q |
156 |
cacaccttgttcttgggaattgctctttactgttgttatataattccattt |
206 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27083133 |
cacaccttgtgcttgggaactgctctttactgttgttatataattccattt |
27083083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 30261384 - 30261292
Alignment:
| Q |
42 |
ttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagcccttta |
134 |
Q |
| |
|
||||||||||||||||||||||| | | | | ||| |||| |||||||| || ||||||||| |||||||| |||||| |||||||||||| |
|
|
| T |
30261384 |
ttagataaggttaaattgttatctcaagggtaactgaaagctaaaaatgtcatatttgtttttggtactcagtagtggtggtcaagcccttta |
30261292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 6900601 - 6900513
Alignment:
| Q |
33 |
ccccgactgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtg |
121 |
Q |
| |
|
||||| |||||||| ||||||||||||| ||| ||| | ||||| |||| ||||||| |||||||||||| | || ||||||||||| |
|
|
| T |
6900601 |
ccccgtctgttagacaaggttaaattgtgatctctagggtgactgaaagccaaaaatgtcatgtttgtttttggcacgcagaggtggtg |
6900513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 23942015 - 23941926
Alignment:
| Q |
40 |
tgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagcc |
129 |
Q |
| |
|
||||||||||||| ||||||||||| || ||||| |||| |||||| || |||||||||| | |||| ||||| ||||| ||||||| |
|
|
| T |
23942015 |
tgttagataaggtcaaattgttatctttagagtgactgaaagctaaaaaggcaatgtttgtttatggtacgcagagatggtggtcaagcc |
23941926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0112 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0112
Description:
Target: scaffold0112; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 16019 - 16145
Alignment:
| Q |
15 |
aatattgtaacctctgttccccgactgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcaga |
114 |
Q |
| |
|
||||||||||||| ||||||||| || ||||||||||| ||||||||| | ||| | || || |||| ||| |||| |||||||||||| ||| |||| |
|
|
| T |
16019 |
aatattgtaacctatgttccccgtctattagataaggtcaaattgttagctctagggtggctgaaagctaagaatgtcatgtttgtttttggtatacaga |
16118 |
T |
 |
| Q |
115 |
ggtggtgatcaagccctttaacttgtc |
141 |
Q |
| |
|
||||||| |||||||||||| |||||| |
|
|
| T |
16119 |
ggtggtggtcaagccctttagcttgtc |
16145 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 34854081 - 34854198
Alignment:
| Q |
39 |
ctgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccctttaactt |
138 |
Q |
| |
|
|||||||||||||||||||||||||| ||| | || || |||| |||||| || |||||||||||| |||| |||||||||| ||||| |||||| || |
|
|
| T |
34854081 |
ctgttagataaggttaaattgttatctctagggtggctgaaagctaaaaaggccatgtttgtttttggtacgtagaggtggtggtcaagtcctttagatt |
34854180 |
T |
 |
| Q |
139 |
gtccttgcattgactaac |
156 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
34854181 |
gtctgggcattgactaac |
34854198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 37139558 - 37139668
Alignment:
| Q |
30 |
gttccccgactgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagcc |
129 |
Q |
| |
|
|||||||| |||||| ||||||| ||||||||||| || ||| || |||| ||||||| ||||||||| ||| | || ||||||||||| ||||||| |
|
|
| T |
37139558 |
gttccccgtctgttatataaggtgaaattgttatcgttagtatggctgaaagccaaaaatgttatgtttgtgtttggcacgcagaggtggtggtcaagcc |
37139657 |
T |
 |
| Q |
130 |
ctttaacttgt |
140 |
Q |
| |
|
||||||||||| |
|
|
| T |
37139658 |
ctttaacttgt |
37139668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 38926482 - 38926392
Alignment:
| Q |
40 |
tgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccc |
130 |
Q |
| |
|
||||||||||||| ||||||||||| || | || || ||||||||||| ||||||||||||| | |||| ||||||||||| |||||||| |
|
|
| T |
38926482 |
tgttagataaggtcaaattgttatctttagggtggctgaaagttaaaaaggctatgtttgtttatggtacgcagaggtggtggtcaagccc |
38926392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 18369396 - 18369490
Alignment:
| Q |
39 |
ctgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagcccttt |
133 |
Q |
| |
|
|||||||||||||||||||||||||| || | || || |||| |||||| ||| ||||||| | | |||| ||||||||||| ||||||||||| |
|
|
| T |
18369396 |
ctgttagataaggttaaattgttatctttaggttggctgaaagctaaaaaggctgtgtttgtctatggtacgcagaggtggtggtcaagcccttt |
18369490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 36708576 - 36708483
Alignment:
| Q |
47 |
taaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccctttaacttgt |
140 |
Q |
| |
|
|||||||||||||||||| | | || || |||| |||||||| | ||||||||| | |||| ||||| ||||| |||||||||||| ||||| |
|
|
| T |
36708576 |
taaggttaaattgttatctttggggtggctgaaagctaaaaatgttgtgtttgtttatggtacgcagagatggtggtcaagccctttagcttgt |
36708483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 9163571 - 9163667
Alignment:
| Q |
40 |
tgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccctttaac |
136 |
Q |
| |
|
|||| |||||| ||||||||||||| || | || || |||| |||||| | |||||||||| | ||||||||| |||||| ||||| |||||||| |
|
|
| T |
9163571 |
tgttggataagattaaattgttatctttagggtggctgaaagctaaaaaaaccatgtttgtttatggtactcagatgtggtggtcaagtcctttaac |
9163667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 26009740 - 26009640
Alignment:
| Q |
40 |
tgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccctttaacttg |
139 |
Q |
| |
|
|||||||||| |||||||| ||||| || | || || |||| ||||||| ||||||||||||| | || | ||||||||| |||| ||||||| |||| |
|
|
| T |
26009740 |
tgttagataaagttaaattattatctttaaggtggctgaaagccaaaaatgttatgtttgtttttggcacgccgaggtggtggtcaaaccctttagcttg |
26009641 |
T |
 |
| Q |
140 |
t |
140 |
Q |
| |
|
| |
|
|
| T |
26009640 |
t |
26009640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 8066668 - 8066758
Alignment:
| Q |
40 |
tgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccc |
130 |
Q |
| |
|
||||||||||||| ||||||||||| || | || || ||||||||||| | |||||||||||| |||| ||||||||||| |||||||| |
|
|
| T |
8066668 |
tgttagataaggtcaaattgttatctttagggtggctgaaagttaaaaagacaatgtttgtttttggtacgcagaggtggtggtcaagccc |
8066758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 36803611 - 36803510
Alignment:
| Q |
39 |
ctgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccctttaactt |
138 |
Q |
| |
|
||||||||||| |||||||||||||| || | || || |||| ||||||| |||||||||||| | || ||||||||||| |||||| ||||||||| |
|
|
| T |
36803611 |
ctgttagataaagttaaattgttatcattaggttggctgaaagcaaaaaatgtcatgtttgtttttggcacgcagaggtggtggtcaagctctttaactt |
36803512 |
T |
 |
| Q |
139 |
gt |
140 |
Q |
| |
|
|| |
|
|
| T |
36803511 |
gt |
36803510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 35487543 - 35487453
Alignment:
| Q |
40 |
tgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccc |
130 |
Q |
| |
|
||||||||||||| ||||||||||| || | || || |||| ||||||||||||| |||||| | ||| ||||||||||| |||||||| |
|
|
| T |
35487543 |
tgttagataaggtcaaattgttatctttagggtggctaaaagctaaaaatgctatgcttgtttatggtatgcagaggtggtggtcaagccc |
35487453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 43782465 - 43782558
Alignment:
| Q |
33 |
ccccgactgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaa |
126 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| ||| || ||||||| ||||||| |||||||||||| | || ||||||||||| |||| |
|
|
| T |
43782465 |
ccccgtctgttagacaaggttaaattgttatctctagagtggcttaaagccaaaaatgtaatgtttgtttttggcacgcagaggtggtggtcaa |
43782558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 18670870 - 18670774
Alignment:
| Q |
38 |
actgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagcccttta |
134 |
Q |
| |
|
||||||||||||||||||||||||||| || | || || |||| |||||| | | ||||||||| | |||| ||||||||||| |||| ||||||| |
|
|
| T |
18670870 |
actgttagataaggttaaattgttatctttagggtggctgaaagctaaaaaggttgtgtttgtttatggtacgcagaggtggtggtcaaacccttta |
18670774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 134
Target Start/End: Original strand, 38780682 - 38780786
Alignment:
| Q |
30 |
gttccccgactgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagcc |
129 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||| ||| | | || |||| ||| |||| |||||||||||| ||||||| |||||||| | || || |
|
|
| T |
38780682 |
gttcccctacttttagataaggttaaattgttatctctagggtcgctgaaagctaataatgtcatgtttgtttttggtactcataggtggtggttaaacc |
38780781 |
T |
 |
| Q |
130 |
cttta |
134 |
Q |
| |
|
||||| |
|
|
| T |
38780782 |
cttta |
38780786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 5326477 - 5326369
Alignment:
| Q |
32 |
tccccgactgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccct |
131 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||| ||| | ||| | |||| || |||| |||||||||||| | || || | |||||| ||||||||| |
|
|
| T |
5326477 |
tccccgcctgttagacaaggttaaattgttatctctagggtgattgaaagccaacaatgtcatgtttgtttttggcacacatatgtggtggtcaagccct |
5326378 |
T |
 |
| Q |
132 |
ttaacttgt |
140 |
Q |
| |
|
||| ||||| |
|
|
| T |
5326377 |
ttagcttgt |
5326369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 41339224 - 41339123
Alignment:
| Q |
39 |
ctgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccctttaactt |
138 |
Q |
| |
|
|||||||| ||||||||||||||||| ||| | || || |||| || |||| |||||||||||| | || || | |||||| |||||| ||||||||| |
|
|
| T |
41339224 |
ctgttagacaaggttaaattgttatctctagggtggctgaaagccaacaatgtcatgtttgtttttggcacgcatatgtggtggtcaagctctttaactt |
41339125 |
T |
 |
| Q |
139 |
gt |
140 |
Q |
| |
|
|| |
|
|
| T |
41339124 |
gt |
41339123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 33804479 - 33804392
Alignment:
| Q |
40 |
tgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaag |
127 |
Q |
| |
|
|||| |||||| ||||||||||||| || | || ||||||| ||||||||| |||||||||| | ||||||||| |||||| ||||| |
|
|
| T |
33804479 |
tgttggataagattaaattgttatcattagggtggcttaaagctaaaaatgccatgtttgtttatggtactcagatgtggtggtcaag |
33804392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 24749356 - 24749246
Alignment:
| Q |
30 |
gttccccgactgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagcc |
129 |
Q |
| |
|
|||||||| |||||||| ||| ||||||||||||| ||| | || || ||| |||||| | |||||||||||| | |||||||| || || ||||||| |
|
|
| T |
24749356 |
gttccccgtctgttagacaagattaaattgttatctctagggtggctgaaaaccaaaaataccatgtttgtttttggcactcagagatgatggtcaagcc |
24749257 |
T |
 |
| Q |
130 |
ctttaacttgt |
140 |
Q |
| |
|
||||| ||||| |
|
|
| T |
24749256 |
ctttagcttgt |
24749246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 26010570 - 26010489
Alignment:
| Q |
40 |
tgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtg |
121 |
Q |
| |
|
||||||||||||||||||||||||| | | || ||||||| |||||||| | ||||||||| | |||| ||||| ||||| |
|
|
| T |
26010570 |
tgttagataaggttaaattgttatctttggggtggcttaaagctaaaaatgttgtgtttgtttatggtacgcagagatggtg |
26010489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 50451777 - 50451683
Alignment:
| Q |
40 |
tgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagcccttta |
134 |
Q |
| |
|
||||||||||||||||||||||||| || || | || |||| |||||| | | ||||||||| | |||| ||||||||||| |||| ||||||| |
|
|
| T |
50451777 |
tgttagataaggttaaattgttatctttaggagggctgaaagctaaaaaggttgtgtttgtttatggtacgcagaggtggtggtcaaacccttta |
50451683 |
T |
 |
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Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 5596813 - 5596888
Alignment:
| Q |
15 |
aatattgtaacctctgttccccgactgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatg |
90 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||| | ||||||||||| ||| | ||| | || |||||||||| |
|
|
| T |
5596813 |
aatattgtaacacctgttccccgtctgttagataagatcaaattgttatctctagggtgattgaaggttaaaaatg |
5596888 |
T |
 |
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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 29094948 - 29095038
Alignment:
| Q |
40 |
tgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccc |
130 |
Q |
| |
|
||||||||||||| ||||||||||| || | || | ||||||||||| | | ||||||||| | |||| ||||||||||| |||||||| |
|
|
| T |
29094948 |
tgttagataaggtcaaattgttatctttagggtggttgaaagttaaaaaggttgtgtttgtttatggtacgcagaggtggtggtcaagccc |
29095038 |
T |
 |
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Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 140
Target Start/End: Complemental strand, 34311898 - 34311796
Alignment:
| Q |
38 |
actgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccctttaact |
137 |
Q |
| |
|
||||||||||||||||||||||||||| | | || || |||| ||||| || | ||||||||| | |||| ||||| ||||| |||| ||||||| || |
|
|
| T |
34311898 |
actgttagataaggttaaattgttatctttggggtggctgaaagataaaactgttgtgtttgtttatggtacgcagagatggtggtcaaaccctttagct |
34311799 |
T |
 |
| Q |
138 |
tgt |
140 |
Q |
| |
|
||| |
|
|
| T |
34311798 |
tgt |
34311796 |
T |
 |
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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 72143 - 72245
Alignment:
| Q |
38 |
actgttagataaggttaaattgttatccctatgatgacttaaagttaaaaatgctatgtttgtttttcgtactcagaggtggtgatcaagccctttaact |
137 |
Q |
| |
|
||||||||||||||||||||||||||| | | ||| | |||| |||||||| | ||||||||| | ||| ||||| ||||| |||| ||||||| || |
|
|
| T |
72143 |
actgttagataaggttaaattgttatctttggggtgattgaaagctaaaaatgttgtgtttgtttatggtatgcagagttggtggtcaaaccctttagct |
72242 |
T |
 |
| Q |
138 |
tgt |
140 |
Q |
| |
|
||| |
|
|
| T |
72243 |
tgt |
72245 |
T |
 |
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