View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14345_low_4 (Length: 428)

Name: NF14345_low_4
Description: NF14345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14345_low_4
NF14345_low_4
[»] chr5 (17 HSPs)
chr5 (35-410)||(41803539-41803914)
chr5 (43-140)||(12115042-12115139)
chr5 (40-143)||(12094273-12094375)
chr5 (89-139)||(22101922-22101972)
chr5 (90-139)||(11142448-11142497)
chr5 (89-145)||(27488355-27488411)
chr5 (89-136)||(73801-73848)
chr5 (90-145)||(29299365-29299420)
chr5 (105-139)||(5818348-5818382)
chr5 (89-135)||(29874335-29874381)
chr5 (221-275)||(35947644-35947698)
chr5 (91-136)||(8680627-8680672)
chr5 (89-145)||(11931977-11932034)
chr5 (89-138)||(35349497-35349546)
chr5 (91-140)||(38394441-38394490)
chr5 (89-145)||(39239802-39239859)
chr5 (104-140)||(26163974-26164010)
[»] chr3 (15 HSPs)
chr3 (42-133)||(14197739-14197830)
chr3 (220-268)||(7278223-7278271)
chr3 (90-145)||(12747782-12747837)
chr3 (90-140)||(19649664-19649714)
chr3 (105-143)||(40504271-40504309)
chr3 (89-142)||(49885390-49885443)
chr3 (89-140)||(43448971-43449022)
chr3 (89-136)||(45113751-45113798)
chr3 (90-132)||(2544544-2544586)
chr3 (90-136)||(44118268-44118314)
chr3 (90-140)||(51723391-51723441)
chr3 (90-147)||(19649585-19649642)
chr3 (90-139)||(28043451-28043500)
chr3 (91-140)||(43343532-43343581)
chr3 (89-145)||(45010834-45010890)
[»] chr2 (19 HSPs)
chr2 (38-135)||(7833300-7833397)
chr2 (89-140)||(38983083-38983134)
chr2 (89-139)||(9152463-9152513)
chr2 (89-143)||(11030276-11030330)
chr2 (90-140)||(12486077-12486127)
chr2 (104-145)||(28494803-28494844)
chr2 (89-145)||(20555266-20555322)
chr2 (214-274)||(29673747-29673807)
chr2 (89-140)||(34447587-34447638)
chr2 (89-140)||(37076229-37076280)
chr2 (104-139)||(43713988-43714023)
chr2 (90-140)||(41153196-41153246)
chr2 (90-147)||(3037810-3037867)
chr2 (91-144)||(4063281-4063334)
chr2 (89-145)||(7943523-7943580)
chr2 (91-140)||(11794462-11794511)
chr2 (89-140)||(4410861-4410913)
chr2 (91-139)||(5559377-5559425)
chr2 (89-145)||(36881541-36881597)
[»] chr4 (28 HSPs)
chr4 (90-147)||(43117939-43117996)
chr4 (90-140)||(30191909-30191959)
chr4 (90-147)||(45828500-45828557)
chr4 (94-145)||(16412242-16412293)
chr4 (89-145)||(55190750-55190806)
chr4 (89-136)||(1100913-1100960)
chr4 (89-136)||(1205166-1205213)
chr4 (90-145)||(3043876-3043931)
chr4 (89-136)||(7086215-7086262)
chr4 (97-140)||(33010687-33010730)
chr4 (89-136)||(33615863-33615910)
chr4 (110-145)||(43413646-43413681)
chr4 (90-145)||(48361060-48361115)
chr4 (90-145)||(53225729-53225784)
chr4 (90-136)||(4418182-4418228)
chr4 (90-140)||(21554193-21554243)
chr4 (89-139)||(23226964-23227014)
chr4 (87-145)||(26066377-26066435)
chr4 (90-136)||(29686485-29686531)
chr4 (89-139)||(44111829-44111879)
chr4 (38-147)||(3043798-3043906)
chr4 (88-145)||(13976848-13976905)
chr4 (90-147)||(34226393-34226450)
chr4 (91-147)||(2643614-2643670)
chr4 (105-145)||(20956989-20957029)
chr4 (89-145)||(41116570-41116626)
chr4 (104-140)||(42670863-42670899)
chr4 (90-154)||(53658449-53658513)
[»] chr7 (25 HSPs)
chr7 (89-147)||(8566165-8566223)
chr7 (89-147)||(41863665-41863723)
chr7 (89-145)||(40234774-40234830)
chr7 (89-140)||(36245460-36245511)
chr7 (89-147)||(11668099-11668157)
chr7 (90-136)||(13860302-13860348)
chr7 (90-140)||(18672106-18672156)
chr7 (233-282)||(6707891-6707940)
chr7 (89-145)||(10007660-10007716)
chr7 (89-145)||(40142857-40142913)
chr7 (89-136)||(10674207-10674254)
chr7 (89-136)||(22618247-22618294)
chr7 (89-140)||(28677401-28677452)
chr7 (89-136)||(39413912-39413959)
chr7 (89-136)||(41487875-41487922)
chr7 (89-136)||(45025678-45025725)
chr7 (35-102)||(45176560-45176627)
chr7 (89-139)||(48082813-48082863)
chr7 (90-139)||(2399966-2400015)
chr7 (91-144)||(4925900-4925953)
chr7 (90-135)||(16861530-16861575)
chr7 (94-147)||(32811798-32811851)
chr7 (90-138)||(2610202-2610250)
chr7 (105-145)||(13807338-13807378)
chr7 (89-149)||(19512735-19512795)
[»] chr1 (20 HSPs)
chr1 (35-137)||(2855115-2855217)
chr1 (87-145)||(25021313-25021371)
chr1 (87-153)||(27422907-27422973)
chr1 (89-145)||(38040360-38040416)
chr1 (89-140)||(7375553-7375604)
chr1 (89-136)||(19998495-19998542)
chr1 (89-139)||(44939150-44939200)
chr1 (90-139)||(25021245-25021294)
chr1 (91-140)||(33018254-33018303)
chr1 (35-139)||(15285466-15285570)
chr1 (89-136)||(13321798-13321845)
chr1 (89-136)||(18038772-18038819)
chr1 (90-145)||(50155383-50155438)
chr1 (90-140)||(34146889-34146939)
chr1 (90-136)||(34174903-34174949)
chr1 (104-145)||(26760272-26760313)
chr1 (105-145)||(29892230-29892270)
chr1 (89-146)||(38590150-38590209)
chr1 (89-145)||(38738015-38738071)
chr1 (89-145)||(49944841-49944897)
[»] chr8 (18 HSPs)
chr8 (89-134)||(24599753-24599798)
chr8 (89-153)||(9633081-9633145)
chr8 (89-136)||(30734535-30734582)
chr8 (89-147)||(35149752-35149810)
chr8 (63-140)||(6354705-6354782)
chr8 (90-145)||(7693118-7693173)
chr8 (90-145)||(8793727-8793782)
chr8 (90-145)||(24822808-24822863)
chr8 (89-136)||(34604865-34604912)
chr8 (89-136)||(34745341-34745388)
chr8 (89-136)||(38298585-38298632)
chr8 (89-136)||(43932133-43932180)
chr8 (89-139)||(1223137-1223187)
chr8 (90-139)||(10184636-10184685)
chr8 (91-140)||(10839776-10839825)
chr8 (95-140)||(15726849-15726894)
chr8 (98-131)||(26268045-26268078)
chr8 (90-139)||(34711095-34711144)
[»] scaffold0110 (1 HSPs)
scaffold0110 (90-139)||(1617-1666)
[»] chr6 (6 HSPs)
chr6 (89-145)||(3064891-3064947)
chr6 (104-140)||(28630852-28630888)
chr6 (103-136)||(23916225-23916258)
chr6 (90-147)||(30627908-30627965)
chr6 (105-137)||(1301932-1301964)
chr6 (89-145)||(33119986-33120042)
[»] scaffold0767 (1 HSPs)
scaffold0767 (89-136)||(3893-3940)
[»] scaffold0070 (1 HSPs)
scaffold0070 (89-145)||(40153-40209)


Alignment Details
Target: chr5 (Bit Score: 280; Significance: 1e-156; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 35 - 410
Target Start/End: Complemental strand, 41803914 - 41803539
Alignment:
Q  35 ttgattttttagattaattgaagagtagatgtatctgatatatatttcaactcggatacatcaattaaacaatgaatctaaaaaatcaattgtttcttat 134  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||  |||||||||||||||    
T  41803914 ttgactttttagatttattgaagagtagatgtatctgataaatatttcaactcggatacacaaattaaacaatgaatctaaaacgtcaattgtttcttat 41803815  T
Q  135 aaatagaaccgaaatgagtgttgattaacgtaaattacgaaatttataatctttttaaagagtattctaacttttgaggacattttttaaggatattcaa 234  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  41803814 aaatagaaccgaaatgaatgttgattaacgtaaattacgaaatttatgatctttttaaagagtattctaacttttgaagacattttttaaggatactcaa 41803715  T
Q  235 ttacgaaattattcattagaaaaacttaatattttaatttttgatacattacatgcataatttcccataaaatttactatctaaaatctttaagaagtgt 334  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||| |||||||||| || |||| |||||||||||||||||||||||||||||||| |    
T  41803714 ttacgaaattattcattagaaaaatttaatatttcaattttcgatatattacatgcacaaattcctataaaatttactatctaaaatctttaagaagtat 41803615  T
Q  335 tttaagatattcattacaatttctcgtaatgatataacataagcggttaattgatgaaaatttatgatgagacttt 410  Q
    ||||||| ||||||||  ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  41803614 tttaagacattcattaacatttctcgtaaagatataacataagcggttaattgataaaaatttatgatgagacttt 41803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 140
Target Start/End: Original strand, 12115042 - 12115139
Alignment:
Q  43 ttagattaattgaagagtagatgtatctgatatatatttcaactcggatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||||| |||||| |||  ||||||||||| |||||||||    ||||||| ||||||| |||||||||||||||||  |||||||| |||||||||    
T  12115042 ttagatttattgaatagttaatgtatctgatctatatttcagaggggatacaacaattaagcaatgaatctaaaaaattgattgtttcctataaatag 12115139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 12094273 - 12094375
Alignment:
Q  40 tttttagattaattgaagagtagatgtatctgatatatatttcaactcggatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    |||||||||| ||| || ||| ||||||| || | ||||||| |   | |||||| |||||||||||||| | |||||||| ||||||||||||||||||    
T  12094273 tttttagatttattaaatagttgatgtatgtggtctatattttagaccagatacaacaattaaacaatgatt-taaaaaattaattgtttcttataaata 12094371  T
Q  140 gaac 143  Q
    ||||    
T  12094372 gaac 12094375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 22101972 - 22101922
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    ||||||| ||||| ||||||||||||||||||||| | |||||||||||||    
T  22101972 gatacattaattacacaatgaatctaaaaaatcaaatttttcttataaata 22101922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 11142448 - 11142497
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    ||||||||||||  ||||||||| ||||||| ||||||||||||||||||    
T  11142448 atacatcaattattcaatgaatcaaaaaaatgaattgtttcttataaata 11142497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 27488411 - 27488355
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||||||||   |||||||||||||||| |||| |||||||||||||| ||||    
T  27488411 gatacatcaattattgaatgaatctaaaaaattaattttttcttataaataggaccg 27488355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 73848 - 73801
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| |||||||||||||||| |||||||||| ||||||    
T  73848 gatacatcatttacacaatgaatctaaaaagtcaattgttttttataa 73801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 29299420 - 29299365
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||||| |  |||||||||||||||||||| | |||||||||||||| ||||    
T  29299420 atacatcaatcactcaatgaatctaaaaaatcaaatttttcttataaataggaccg 29299365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 5818348 - 5818382
Alignment:
Q  105 aatgaatctaaaaaatcaattgtttcttataaata 139  Q
    ||||||||||||||||||||||||| |||||||||    
T  5818348 aatgaatctaaaaaatcaattgttttttataaata 5818382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 29874381 - 29874335
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttata 135  Q
    ||||||||| |||||||||||| | ||||| ||||||||||||||||    
T  29874381 gatacatcacttaaacaatgaaccaaaaaagtcaattgtttcttata 29874335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 35947644 - 35947698
Alignment:
Q  221 ttaaggatattcaattacgaaattattcattagaaaaacttaatattttaatttt 275  Q
    ||||||||| ||||| | |||| |||||||| |||||||||||||||| ||||||    
T  35947644 ttaaggatactcaatcaagaaactattcattggaaaaacttaatatttcaatttt 35947698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 8680627 - 8680672
Alignment:
Q  91 tacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||| |||||||||||| ||||||| |||| ||||||||||||    
T  8680627 tacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataa 8680672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 11932034 - 11931977
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaa-ttgtttcttataaatagaaccg 145  Q
    ||||||| ||||| |||||||||||||||| |||| || |||||||||||||| ||||    
T  11932034 gatacattaattacacaatgaatctaaaaagtcaatttttttcttataaataggaccg 11931977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 35349497 - 35349546
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaat 138  Q
    |||||||||||||  ||||||||||||||| |||||| ||| ||||||||    
T  35349497 gatacatcaattactcaatgaatctaaaaagtcaattattttttataaat 35349546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 38394490 - 38394441
Alignment:
Q  91 tacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||| |||||  ||||||||||||||| |||||| ||||||||||||||    
T  38394490 tacattaattattcaatgaatctaaaaagtcaattttttcttataaatag 38394441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 39239859 - 39239802
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaa-ttgtttcttataaatagaaccg 145  Q
    ||||||| ||||| ||||||||||||||||  ||| || |||||||||||||||||||    
T  39239859 gatacattaattacacaatgaatctaaaaagacaatttttttcttataaatagaaccg 39239802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 140
Target Start/End: Complemental strand, 26164010 - 26163974
Alignment:
Q  104 caatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||| |||||||||| |||||||||||||||||||||    
T  26164010 caataaatctaaaaagtcaattgtttcttataaatag 26163974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 7e-19; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 14197739 - 14197830
Alignment:
Q  42 tttagattaattgaagagtagatgtatctgatatatatttca-actcggatacatcaattaaacaatgaatctaaaaaatcaattgtttctta 133  Q
    |||||||| |||||||||| |||||||||| |||||||| || ||| |||||||||||| || ||||||||||||||| ||||||||||||||    
T  14197739 tttagattcattgaagagttgatgtatctggtatatattacagact-ggatacatcaatcaagcaatgaatctaaaaagtcaattgtttctta 14197830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 7278271 - 7278223
Alignment:
Q  220 tttaaggatattcaattacgaaattattcattagaaaaacttaatattt 268  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  7278271 tttaaggatactcaattacgaaactattcattagaaaagcttaatattt 7278223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 12747782 - 12747837
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||||||||  | |||||||||||||||||||| |||||||||||||| ||||    
T  12747782 atacatcaattactcgatgaatctaaaaaatcaattttttcttataaataggaccg 12747837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 19649664 - 19649714
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||||||||||  |||||||||||||||||||| |||||||| |||||||    
T  19649664 atacatcaattactcaatgaatctaaaaaatcaaatgtttcttgtaaatag 19649714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 143
Target Start/End: Original strand, 40504271 - 40504309
Alignment:
Q  105 aatgaatctaaaaaatcaattgtttcttataaatagaac 143  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  40504271 aatgaatcaaaaaaatcaattgtttcttataaatagaac 40504309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 49885443 - 49885390
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaa 142  Q
    |||||||||||||   |||||||||||||||| |||| ||||||||||||||||    
T  49885443 gatacatcaattattgaatgaatctaaaaaattaattttttcttataaatagaa 49885390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 43449022 - 43448971
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||| ||||||||  |||||||||||||||||||| | ||||||||||||||    
T  43449022 gatatatcaattactcaatgaatctaaaaaatcaactttttcttataaatag 43448971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 45113798 - 45113751
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| |||||||| | |||||||||||||||||||||||    
T  45113798 gatacatcacttacacaatgaaccaaaaaaatcaattgtttcttataa 45113751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 2544544 - 2544586
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttctt 132  Q
    |||||||| ||| |||||||||||||||| |||||||||||||    
T  2544544 atacatcacttatacaatgaatctaaaaagtcaattgtttctt 2544586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 44118268 - 44118314
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    |||||| ||||| | |||||||||||||| |||||||||||||||||    
T  44118268 atacattaattatataatgaatctaaaaagtcaattgtttcttataa 44118314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 51723441 - 51723391
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||||| |||||  |||||||||||||||||||| | ||||||||||||||    
T  51723441 atacattaattactcaatgaatctaaaaaatcaactttttcttataaatag 51723391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 19649642 - 19649585
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaa 147  Q
    ||||||||||||  ||||||||| ||||| |||| |||||||| |||||| |||||||    
T  19649642 atacatcaattattcaatgaatcaaaaaagtcaaatgtttcttgtaaataaaaccgaa 19649585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 28043451 - 28043500
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    |||||| |||||  ||||||||||||| ||||||| ||||||||||||||    
T  28043451 atacattaattattcaatgaatctaaataatcaatagtttcttataaata 28043500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 43343532 - 43343581
Alignment:
Q  91 tacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||||| ||| |||||||||| ||||| |||| ||||||||||||||||    
T  43343532 tacatcatttatacaatgaatcaaaaaagtcaaatgtttcttataaatag 43343581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 45010834 - 45010890
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||||||||  |||| |||||||||||| |||| | |||||||||||| ||||    
T  45010834 gatacatcaattattcaataaatctaaaaaattaattttctcttataaataggaccg 45010890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 7833397 - 7833300
Alignment:
Q  38 attttttagattaattgaagagtagatgtatctgatatatatttcaactcggatacatcaattaaacaatgaatctaaaaaatcaattgtttcttata 135  Q
    |||||||||||| ||| || |||  ||||||||||| ||||||| || || |||||||||||||  |||||||||||||||||  |||||||||||||    
T  7833397 attttttagatttattaaatagttaatgtatctgatctatattttaaatcagatacatcaattattcaatgaatctaaaaaattgattgtttcttata 7833300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 38983083 - 38983134
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||||||||||| ||||||||||||||||||||| | ||| ||||||||||    
T  38983083 gatacatcaattacacaatgaatctaaaaaatcaacttttttttataaatag 38983134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 9152463 - 9152513
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    |||||||||||||  ||||||||||||||| ||||||||||||| ||||||    
T  9152463 gatacatcaattactcaatgaatctaaaaagtcaattgtttcttgtaaata 9152513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 11030276 - 11030330
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaac 143  Q
    |||||||||||||  ||||||||||||||| | |||| |||||||||||||||||    
T  11030276 gatacatcaattactcaatgaatctaaaaagttaattttttcttataaatagaac 11030330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 12486077 - 12486127
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||||||||||  ||||||||||||||| ||||||||||||| |||||||    
T  12486077 atacatcaattattcaatgaatctaaaaagtcaattgtttcttgtaaatag 12486127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 28494803 - 28494844
Alignment:
Q  104 caatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  28494803 caatgaatcaaaaaaatcaaatgtttcttataaatagaaccg 28494844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 20555322 - 20555266
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||||||||  ||||| ||||||||||| |||| |||||||||||||| ||||    
T  20555322 gatacatcaattattcaatgtatctaaaaaattaattttttcttataaataggaccg 20555266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 29673747 - 29673807
Alignment:
Q  214 acattttttaaggatattcaattacgaaattattcattagaaaaacttaatattttaattt 274  Q
    ||||||||||||||||||||||||  ||||||||  ||  ||||||||||||||| |||||    
T  29673747 acattttttaaggatattcaattaaaaaattattttttgaaaaaacttaatatttcaattt 29673807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 34447587 - 34447638
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||||||  |||| ||||||||||||||||||||| | ||||||||||||||    
T  34447587 gatacattgattacacaatgaatctaaaaaatcaactttttcttataaatag 34447638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 37076229 - 37076280
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||||||||||||  |||| |||||||||| || ||||||||||||||||||    
T  37076229 gatacatcaattatccaataaatctaaaaagtcgattgtttcttataaatag 37076280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 43714023 - 43713988
Alignment:
Q  104 caatgaatctaaaaaatcaattgtttcttataaata 139  Q
    ||||||||| ||||||||||||||||||||||||||    
T  43714023 caatgaatcaaaaaaatcaattgtttcttataaata 43713988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 41153196 - 41153246
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||||||||||  ||||||||||||||| |||| | ||||||||||||||    
T  41153196 atacatcaattactcaatgaatctaaaaagtcaactttttcttataaatag 41153246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 3037810 - 3037867
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaa 147  Q
    |||||| |||||  ||||||||||||||||||| ||||||||| || |||| ||||||    
T  3037810 atacataaattattcaatgaatctaaaaaatcatttgtttcttgtatataggaccgaa 3037867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 4063334 - 4063281
Alignment:
Q  91 tacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaacc 144  Q
    |||||||||||   |||||||||||||||| || | ||||||||||||||||||    
T  4063334 tacatcaattattgaatgaatctaaaaaattaactttttcttataaatagaacc 4063281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 7943523 - 7943580
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaa-ttgtttcttataaatagaaccg 145  Q
    |||||||||||||  ||||||||||||||| |||| || |||||||||||||| ||||    
T  7943523 gatacatcaattattcaatgaatctaaaaagtcaatttttttcttataaataggaccg 7943580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 11794511 - 11794462
Alignment:
Q  91 tacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||| |||||  |||| ||||||||||||||||| ||||||||||||||    
T  11794511 tacattaattattcaataaatctaaaaaatcaattttttcttataaatag 11794462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 4410861 - 4410913
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaa-ttgtttcttataaatag 140  Q
    ||||||| ||||| |||||||||||||||| |||| || ||||||||||||||    
T  4410861 gatacattaattacacaatgaatctaaaaagtcaacttttttcttataaatag 4410913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 5559425 - 5559377
Alignment:
Q  91 tacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    |||||||||||  ||||||||||||||| |||| | |||||||||||||    
T  5559425 tacatcaattactcaatgaatctaaaaagtcaaatttttcttataaata 5559377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 36881597 - 36881541
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||| |||||  ||||| ||||||||| |||| | |||||||||||||||||||    
T  36881597 gatacattaattactcaatgtatctaaaaagtcaaatttttcttataaatagaaccg 36881541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 43117939 - 43117996
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaa 147  Q
    ||||||||||||  |||||||| ||||||||||||| |||||||||||||||||||||    
T  43117939 atacatcaattattcaatgaatgtaaaaaatcaattttttcttataaatagaaccgaa 43117996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 30191959 - 30191909
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||||||||||  |||||||||||||||||||||| ||||||||||||||    
T  30191959 atacatcaattactcaatgaatctaaaaaatcaattttttcttataaatag 30191909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 45828500 - 45828557
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaa 147  Q
    |||||| |||||  |||||||||||||||||||||| |||||||||||||| ||||||    
T  45828500 atacattaattactcaatgaatctaaaaaatcaattttttcttataaataggaccgaa 45828557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 16412293 - 16412242
Alignment:
Q  94 atcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||||  ||||||||||||||| |||||| |||||||||||||||||||    
T  16412293 atcaattattcaatgaatctaaaaagtcaattttttcttataaatagaaccg 16412242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 55190750 - 55190806
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||||||||   ||||||| ||||||||||||| |||||||||||||| ||||    
T  55190750 gatacatcaattattgaatgaatataaaaaatcaattttttcttataaataggaccg 55190806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 1100960 - 1100913
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| |||||||||||| ||||||| |||| ||||||||||||    
T  1100960 gatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataa 1100913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 1205166 - 1205213
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| ||||||||| ||||||||||||| ||||||||||    
T  1205166 gatacatcacttagacaatgaatataaaaaatcaattttttcttataa 1205213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 3043876 - 3043931
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||||| ||  ||||||||| ||||||| |||||||||||||| |||||||||    
T  3043876 atacatcaactattcaatgaatcaaaaaaataaattgtttcttatatatagaaccg 3043931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 7086215 - 7086262
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| |||||||||||| ||||||| |||| ||||||||||||    
T  7086215 gatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataa 7086262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 33010730 - 33010687
Alignment:
Q  97 aattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||    
T  33010730 aattacacaattaatctaaaaaatcaattttttcttataaatag 33010687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 33615863 - 33615910
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| |||||||||||||||| |||||||||| ||||||    
T  33615863 gatacatcacttacacaatgaatctaaaaattcaattgttttttataa 33615910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 43413646 - 43413681
Alignment:
Q  110 atctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||||||||||||||||||| ||||||||||||    
T  43413646 atctaaaaaatcaattgtttcttgtaaatagaaccg 43413681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 48361115 - 48361060
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||||||||  ||||||||||||||| |||| | |||||||||||||| ||||    
T  48361115 atacatcaattactcaatgaatctaaaaagtcaaatttttcttataaataggaccg 48361060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 53225729 - 53225784
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||| |||||  ||||||||||||||| |||||| |||||||||||||| ||||    
T  53225729 atacattaattattcaatgaatctaaaaagtcaattttttcttataaataggaccg 53225784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 4418182 - 4418228
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    |||||||| ||| |||||||| |||||||||||||| ||||||||||    
T  4418182 atacatcacttacacaatgaacctaaaaaatcaattttttcttataa 4418228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 21554193 - 21554243
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||||| |||||  |||||||||||||||||||| | ||||||||||||||    
T  21554193 atacattaattactcaatgaatctaaaaaatcaactttttcttataaatag 21554243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 23227014 - 23226964
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    ||||||| ||||| | |||||||||||||| |||||| |||||||||||||    
T  23227014 gatacattaattacataatgaatctaaaaagtcaattttttcttataaata 23226964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 26066435 - 26066377
Alignment:
Q  87 cggatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||||||||||  ||||||||||  ||| |||||| |||||||||||||| ||||    
T  26066435 cggatacatcaattattcaatgaatcttgaaagtcaattatttcttataaatagtaccg 26066377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 29686485 - 29686531
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    |||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  29686485 atacattaattatacaatgaatttaaaaaattaattgtttcttataa 29686531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 44111829 - 44111879
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    |||||||||||||  ||||||||||||||| |||| | |||||||||||||    
T  44111829 gatacatcaattactcaatgaatctaaaaagtcaactttttcttataaata 44111879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 147
Target Start/End: Complemental strand, 3043906 - 3043798
Alignment:
Q  38 attttttagattaattgaagagtagatgtatctgatatatatttcaactcggatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaa 137  Q
    ||||||| |||| |||||| ||| ||||||| || | ||| |||  ||| || |||||||||||   |||||||||||||||| || | |||||||||||    
T  3043906 atttttttgattcattgaatagttgatgtatttggtctatttttagactagg-tacatcaattattgaatgaatctaaaaaattaactttttcttataaa 3043808  T
Q  138 tagaaccgaa 147  Q
    ||| ||||||    
T  3043807 taggaccgaa 3043798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 13976848 - 13976905
Alignment:
Q  88 ggatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||||||||||  || |||| ||||||| |||||||||||||| |||||| ||||    
T  13976848 ggatacatcaattacccagtgaacctaaaaagtcaattgtttcttagaaataggaccg 13976905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 34226450 - 34226393
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaa 147  Q
    ||||||||||||  ||||||||| ||||| | |||||||| ||||||||||| |||||    
T  34226450 atacatcaattattcaatgaatcaaaaaagtaaattgtttattataaatagatccgaa 34226393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 2643670 - 2643614
Alignment:
Q  91 tacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaa 147  Q
    ||||| |||||  ||||||| ||||||| |||||| |||||||||||||| ||||||    
T  2643670 tacataaattattcaatgaaactaaaaagtcaattatttcttataaataggaccgaa 2643614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 20956989 - 20957029
Alignment:
Q  105 aatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||| ||||||| |||||||||||||| |||||||||    
T  20956989 aatgaatcaaaaaaataaattgtttcttatatatagaaccg 20957029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 41116626 - 41116570
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||||||||  ||||||||||||||| | || | |||||||||||||| ||||    
T  41116626 gatacatcaattactcaatgaatctaaaaagttaaatttttcttataaataggaccg 41116570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 42670863 - 42670899
Alignment:
Q  104 caatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  42670863 caatgaatctaaaaagtcaaatgtttcttataaatag 42670899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 53658449 - 53658513
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaaatgagtg 154  Q
    |||||| | ||| ||||| |||||||||||| || | ||||||||||||||||||| || |||||    
T  53658449 atacattagttatacaataaatctaaaaaattaactttttcttataaatagaaccggaaggagtg 53658513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 8566165 - 8566223
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaa 147  Q
    |||||||||||||  |||||||||||||||||||| | |||||||||||||| ||||||    
T  8566165 gatacatcaattactcaatgaatctaaaaaatcaaatttttcttataaataggaccgaa 8566223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 41863665 - 41863723
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaa 147  Q
    ||||||| ||||| ||||||||| |||||| |||||| |||||||||||||||||||||    
T  41863665 gatacattaattacacaatgaatttaaaaagtcaattttttcttataaatagaaccgaa 41863723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 40234830 - 40234774
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||||| ||| |||||||||||||||| |||||||||||||||||  |||||||    
T  40234830 gatacatcagttacacaatgaatctaaaaagtcaattgtttcttataataagaaccg 40234774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 36245460 - 36245511
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||||||||||||  ||||||||||||||| |||||| ||||||||||||||    
T  36245460 gatacatcaattactcaatgaatctaaaaagtcaattttttcttataaatag 36245511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 11668099 - 11668157
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaa 147  Q
    |||||||||||||| |||||||| |||||| |||| | |||||||||||||| ||||||    
T  11668099 gatacatcaattaatcaatgaatgtaaaaagtcaaatttttcttataaataggaccgaa 11668157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 13860302 - 13860348
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    |||||| ||||| |||||||||||||||| |||||||||||||||||    
T  13860302 atacattaattatacaatgaatctaaaaagtcaattgtttcttataa 13860348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 18672156 - 18672106
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||||| |||||||||||| ||||||||||||||||| ||||| |||||||    
T  18672156 atacataaattaaacaatgtatctaaaaaatcaattgcttcttgtaaatag 18672106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 6707891 - 6707940
Alignment:
Q  233 aattacgaaattattcattagaaaaacttaatattttaatttttgataca 282  Q
    ||||| |||||| |||||| |||||||||||||||| |||||||||||||    
T  6707891 aattaagaaattgttcattggaaaaacttaatatttcaatttttgataca 6707940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 10007660 - 10007716
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||| ||||| |||||||||||||||| |||| | |||||||||||||| ||||    
T  10007660 gatacattaattatacaatgaatctaaaaagtcaactttttcttataaataggaccg 10007716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 40142857 - 40142913
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||| ||||| ||||| ||||||||||||||||| ||||||||| |||| ||||    
T  40142857 gatacattaattatacaataaatctaaaaaatcaattttttcttatacataggaccg 40142913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 10674207 - 10674254
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| | |||||||||||||| |||||||||||||||||    
T  10674207 gatacatcacttacataatgaatctaaaaagtcaattgtttcttataa 10674254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 22618247 - 22618294
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| |||||||| ||||||| |||||||||||||||||    
T  22618247 gatacatcacttacacaatgaacctaaaaagtcaattgtttcttataa 22618294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 28677401 - 28677452
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||||||||||||  |||| |||||||||| |||||| ||||||||||||||    
T  28677401 gatacatcaattactcaataaatctaaaaagtcaattttttcttataaatag 28677452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 39413912 - 39413959
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| ||||||||  ||||||||||||||||||||||||    
T  39413912 gatacatcacttatacaatgaacttaaaaaatcaattgtttcttataa 39413959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 41487875 - 41487922
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| |||||||| | |||||||||||||||||||||||    
T  41487875 gatacatcacttacacaatgaaccaaaaaaatcaattgtttcttataa 41487922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 45025678 - 45025725
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| | ||||||||||||||||||| ||||||||||||    
T  45025678 gatacatcacttacataatgaatctaaaaaatcaaatgtttcttataa 45025725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 45176560 - 45176627
Alignment:
Q  35 ttgattttttagattaattgaagagtagatgtatctgatatatatttcaactcggatacatcaattaa 102  Q
    |||| |||||||||| ||| |||||| ||||||| |||||||||||| |   ||||||||||||||||    
T  45176560 ttgactttttagattcattaaagagttgatgtatatgatatatattttagaccggatacatcaattaa 45176627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 48082863 - 48082813
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    ||||||| ||||| |||||||||||||||| |||| | |||||||||||||    
T  48082863 gatacattaattacacaatgaatctaaaaagtcaactttttcttataaata 48082813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 2400015 - 2399966
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    |||||||| ||| |||||||||| ||||| |||| |||||||||||||||    
T  2400015 atacatcatttatacaatgaatcaaaaaagtcaaatgtttcttataaata 2399966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 4925953 - 4925900
Alignment:
Q  91 tacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaacc 144  Q
    |||||||||||   |||||||||||||| |||| | ||||||||||||||||||    
T  4925953 tacatcaattacttaatgaatctaaaaagtcaaatttttcttataaatagaacc 4925900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 16861575 - 16861530
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttata 135  Q
    ||||||||||||  ||||||||||||||| |||||||||| |||||    
T  16861575 atacatcaattattcaatgaatctaaaaagtcaattgttttttata 16861530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 32811798 - 32811851
Alignment:
Q  94 atcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaa 147  Q
    ||||||||  ||||||||||||||||| |||| |||||||||||| | ||||||    
T  32811798 atcaattactcaatgaatctaaaaaattaattttttcttataaattggaccgaa 32811851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 2610250 - 2610202
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaat 138  Q
    ||||||||||||  |||||||| ||||||||||| | ||||||||||||    
T  2610250 atacatcaattactcaatgaatttaaaaaatcaaatttttcttataaat 2610202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 13807338 - 13807378
Alignment:
Q  105 aatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||| ||||| |||| |||||||||||||||||||||    
T  13807338 aatgaatcaaaaaagtcaaatgtttcttataaatagaaccg 13807378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 19512795 - 19512735
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaaat 149  Q
    ||||| |||||||  |||||||| |||||| |||||||||||||||| | | |||||||||    
T  19512795 gatacgtcaattattcaatgaatttaaaaagtcaattgtttcttatatacaaaaccgaaat 19512735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 137
Target Start/End: Original strand, 2855115 - 2855217
Alignment:
Q  35 ttgattttttagattaattgaagagtagatgtatctgatatatatttcaactcggatacatcaattaaacaatgaatctaaaaaatcaattgtttcttat 134  Q
    |||| |||||| ||| |||||||||  ||| ||| |||||||||||| |    ||||| |||||||||||||||||| |||||| |||||||||| ||||    
T  2855115 ttgactttttaaatttattgaagagatgatttatttgatatatattttagacgggatatatcaattaaacaatgaatttaaaaagtcaattgttttttat 2855214  T
Q  135 aaa 137  Q
    |||    
T  2855215 aaa 2855217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 25021313 - 25021371
Alignment:
Q  87 cggatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||||||||||  |||| |||||||||| ||||||||||||| ||||||||||||    
T  25021313 cggatacatcaattattcaataaatctaaaaagtcaattgtttcttgtaaatagaaccg 25021371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 27422973 - 27422907
Alignment:
Q  87 cggatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaaatgagt 153  Q
    ||||||||||||||||  ||| |||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  27422973 cggatacatcaattaattaataaatctataaagtcaattgtttcttgtaaatagaaccaaaatgagt 27422907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 38040360 - 38040416
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||||||||| ||||||||||||||| |||| | |||||||||||||| ||||    
T  38040360 gatacatcaattaatcaatgaatctaaaaagtcaaatttttcttataaataggaccg 38040416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 7375553 - 7375604
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||||| ||||| |||||||||||||||| |||||| ||||||||||||||    
T  7375553 gatacattaattacacaatgaatctaaaaagtcaattttttcttataaatag 7375604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 19998495 - 19998542
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  19998495 gatacatcacttacacaatgaatctaaaaattcaattgtttcttataa 19998542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 44939150 - 44939200
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    |||||||||||||  |||||||||||||||||||||| | |||||||||||    
T  44939150 gatacatcaattactcaatgaatctaaaaaatcaattttctcttataaata 44939200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 25021294 - 25021245
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    ||||||||||||  ||||||||||||||| ||| ||||||||||||||||    
T  25021294 atacatcaattattcaatgaatctaaaaagtcatttgtttcttataaata 25021245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 33018303 - 33018254
Alignment:
Q  91 tacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||||||||||  |||||||| ||||||||||| ||||||||||||||||    
T  33018303 tacatcaattatgcaatgaatttaaaaaatcaaatgtttcttataaatag 33018254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 139
Target Start/End: Original strand, 15285466 - 15285570
Alignment:
Q  35 ttgattttttagattaattgaagagtagatgtatctgatatatatttcaactcggatacatcaattaaacaatgaatctaaaaaatcaattgtttcttat 134  Q
    |||| |||||||||| |||||| | | ||||||||||||  |||||  |  ||  ||||||||||||  |||| ||||||||||||||| ||| ||||||    
T  15285466 ttgaatttttagatttattgaataattgatgtatctgatccatattcaagatcaaatacatcaattattcaatcaatctaaaaaatcaagtgtctcttat 15285565  T
Q  135 aaata 139  Q
    |||||    
T  15285566 aaata 15285570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 13321798 - 13321845
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| | ||||||||||||||||||| ||||||||||||    
T  13321798 gatacatcacttacataatgaatctaaaaaatcaaatgtttcttataa 13321845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 18038772 - 18038819
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| |||||||||||||||||||| |||| ||||| ||||||    
T  18038772 gatacatcacttaaacaatgaatctaaaaagtcaaatgttttttataa 18038819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 50155383 - 50155438
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||||||||  ||||||||||||||| |||| | |||||||||||||| ||||    
T  50155383 atacatcaattactcaatgaatctaaaaagtcaactttttcttataaataggaccg 50155438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 34146889 - 34146939
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||||| |||||  ||||||||| |||||||||||| ||||||||||||||    
T  34146889 atacattaattattcaatgaatcaaaaaaatcaattttttcttataaatag 34146939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 34174949 - 34174903
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    |||||||| ||| |||||||| ||||||| |||||||||||||||||    
T  34174949 atacatcacttacacaatgaacctaaaaagtcaattgtttcttataa 34174903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 26760272 - 26760313
Alignment:
Q  104 caatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||| ||||||||||||| |||||||||||||| ||||    
T  26760272 caatgaatttaaaaaatcaattttttcttataaataggaccg 26760313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 29892230 - 29892270
Alignment:
Q  105 aatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||||||||| ||||||||||| ||||||||| ||||    
T  29892230 aatgaatctaaaaagtcaattgtttcctataaataggaccg 29892270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 38590150 - 38590209
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaa--ttgtttcttataaatagaaccga 146  Q
    |||||||||||||  ||||||||||||||| | ||  || ||||||||||||||||||||    
T  38590150 gatacatcaattactcaatgaatctaaaaagttaattttttttcttataaatagaaccga 38590209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 38738015 - 38738071
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||||||||  ||||||||||||||| | || | |||||||||||||| ||||    
T  38738015 gatacatcaattactcaatgaatctaaaaagttaaatttttcttataaataggaccg 38738071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 49944897 - 49944841
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||||||||  ||||||||||||||| | || | |||||||||||||| ||||    
T  49944897 gatacatcaattattcaatgaatctaaaaagttaaatttttcttataaataggaccg 49944841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 24599753 - 24599798
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttat 134  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  24599753 gatacatcagttatacaatgaatctaaaaaatcaattgtttcttat 24599798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 9633145 - 9633081
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaaatgagt 153  Q
    ||||||| ||||| |||||||||||||||  |||||||||||||||||  || ||||||||||||    
T  9633145 gatacattaattatacaatgaatctaaaacgtcaattgtttcttataataaggaccgaaatgagt 9633081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 30734582 - 30734535
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||||    
T  30734582 gatacatcaattacacaatgaatctaaaaaataatttgtttcttataa 30734535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 35149752 - 35149810
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaa 147  Q
    ||||||| ||||| ||||| ||||||||||||||| | |||||||||||||| ||||||    
T  35149752 gatacattaattacacaataaatctaaaaaatcaactttttcttataaataggaccgaa 35149810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 6354705 - 6354782
Alignment:
Q  63 atgtatctgatatatatttcaactcggatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||||| |||||||||||  |  ||| |||||| |||||  ||||||||||||||||| |||| ||||||||||||||    
T  6354705 atgtatatgatatatattctagatcgaatacataaattattcaatgaatctaaaaaattaattatttcttataaatag 6354782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 7693118 - 7693173
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||| |||||  ||||||||||||||| |||||| |||||||||||||| ||||    
T  7693118 atacattaattactcaatgaatctaaaaagtcaattttttcttataaataggaccg 7693173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 8793782 - 8793727
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||||||||  |||||||||||||| ||||| | || ||||||||||||||||    
T  8793782 atacatcaattactcaatgaatctaaaatatcaacttttacttataaatagaaccg 8793727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 24822808 - 24822863
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||| ||||| ||||| |||||||||| |||||| |||||||||||||| ||||    
T  24822808 atacattaattatacaataaatctaaaaagtcaattttttcttataaataggaccg 24822863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 34604865 - 34604912
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| |||||||| | |||||||||||||||||||||||    
T  34604865 gatacatcacttatacaatgaaccaaaaaaatcaattgtttcttataa 34604912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 34745341 - 34745388
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| | ||||||||||||||||||| ||||||||||||    
T  34745341 gatacatcacttacataatgaatctaaaaaatcaaatgtttcttataa 34745388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 38298585 - 38298632
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||| |||||  ||||||| |||||||||||||||||||||||||    
T  38298585 gatacattaattattcaatgaacctaaaaaatcaattgtttcttataa 38298632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 43932133 - 43932180
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||| |||||  ||||||||||||||| |||||||||||||||||    
T  43932133 gatacattaattattcaatgaatctaaaaagtcaattgtttcttataa 43932180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 1223187 - 1223137
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    ||||||| ||||| |||||||||||||||| ||| || |||||||||||||    
T  1223187 gatacattaattacacaatgaatctaaaaagtcacttttttcttataaata 1223137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 10184636 - 10184685
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    ||||||||||||  ||||||||||||||| || ||| |||||||||||||    
T  10184636 atacatcaattattcaatgaatctaaaaagtcgattttttcttataaata 10184685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 10839825 - 10839776
Alignment:
Q  91 tacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||| |||||  ||||||||||||||| |||||| ||||||||||||||    
T  10839825 tacattaattattcaatgaatctaaaaagtcaattttttcttataaatag 10839776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 15726849 - 15726894
Alignment:
Q  95 tcaattaaacaatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    |||||||  ||||||||||||||| |||||| ||||||||||||||    
T  15726849 tcaattactcaatgaatctaaaaagtcaattttttcttataaatag 15726894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 26268078 - 26268045
Alignment:
Q  98 attaaacaatgaatctaaaaaatcaattgtttct 131  Q
    |||| |||||||||||||||||||||||||||||    
T  26268078 attacacaatgaatctaaaaaatcaattgtttct 26268045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 34711144 - 34711095
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    ||||||||||||  ||||||||||||||| |||||| ||| |||||||||    
T  34711144 atacatcaattactcaatgaatctaaaaagtcaatttttttttataaata 34711095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 1617 - 1666
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaata 139  Q
    ||||||||||||  ||||||||||||||||| |||| |||||||||||||    
T  1617 atacatcaattattcaatgaatctaaaaaattaattttttcttataaata 1666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 3064947 - 3064891
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||| ||||| ||||||||||||||||   |||| |||||||||||||||||||    
T  3064947 gatacattaattatacaatgaatctaaaaagataattttttcttataaatagaaccg 3064891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 28630852 - 28630888
Alignment:
Q  104 caatgaatctaaaaaatcaattgtttcttataaatag 140  Q
    ||||||||||||||| |||||||||||||||||||||    
T  28630852 caatgaatctaaaaagtcaattgtttcttataaatag 28630888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 23916225 - 23916258
Alignment:
Q  103 acaatgaatctaaaaaatcaattgtttcttataa 136  Q
    |||||||||||||||| |||||||||||||||||    
T  23916225 acaatgaatctaaaaagtcaattgtttcttataa 23916258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 30627908 - 30627965
Alignment:
Q  90 atacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccgaa 147  Q
    |||||||| |||  |||||||||  |||| |||| |||||||||||||||||||||||    
T  30627908 atacatcatttatgcaatgaatcagaaaagtcaaatgtttcttataaatagaaccgaa 30627965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 1301964 - 1301932
Alignment:
Q  105 aatgaatctaaaaaatcaattgtttcttataaa 137  Q
    |||| ||||||||||||||||||||||||||||    
T  1301964 aatgtatctaaaaaatcaattgtttcttataaa 1301932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 33119986 - 33120042
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    |||||||| ||||  ||||||||||||||| ||||   |||||||||||||||||||    
T  33119986 gatacatcgattattcaatgaatctaaaaagtcaaaattttcttataaatagaaccg 33120042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 3893 - 3940
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataa 136  Q
    ||||||||| ||| |||||||| ||||||| |||||||||||||||||    
T  3893 gatacatcacttacacaatgaacctaaaaagtcaattgtttcttataa 3940  T

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Target: scaffold0070 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 40209 - 40153
Alignment:
Q  89 gatacatcaattaaacaatgaatctaaaaaatcaattgtttcttataaatagaaccg 145  Q
    ||||||||||||| | |||||||||||| | | |||| || ||||||||||||||||    
T  40209 gatacatcaattacataatgaatctaaagagttaatttttccttataaatagaaccg 40153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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