View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14346_high_22 (Length: 319)
Name: NF14346_high_22
Description: NF14346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14346_high_22 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 10 - 319
Target Start/End: Original strand, 127870 - 128179
Alignment:
| Q |
10 |
catcatcatcattattattgaatggtacttaatataaaattttgtttctatgaacttacaggttttgttggagatatatagagtggtaaaggtatattcg |
109 |
Q |
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| T |
127870 |
catcatcatcattattattgaatggtacttaatataaaattttgtttctatgaacttacaggttttgttggagatatatagagtggtaaaggtatattcg |
127969 |
T |
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| Q |
110 |
ggatctgttgaagatatataaaatggaatcttatgttattttcttatatattgtgttttgtagcagtagtttaaacgctgaaagaattataataatttct |
209 |
Q |
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| T |
127970 |
ggatctgttgaagatatataagatggaatcttatgttattttcttctatattgtgttttgtagcagtagtttaaacgctgaaagaattataataatttct |
128069 |
T |
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| Q |
210 |
gaatagaactttttgacaataatctatatatttaggccggcggtggaggctgtgtgatcacctcttcaaaaaactattccggtgtactcgggaataaaag |
309 |
Q |
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| T |
128070 |
gaatagaactttttgacaataatctatatatttaggccggctgtggaggatgtgcgataacctcttcaaaaaactattcaggtgtacacgggaataaaag |
128169 |
T |
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| Q |
310 |
gagtataatg |
319 |
Q |
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| T |
128170 |
tagtataatg |
128179 |
T |
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