View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14346_high_33 (Length: 247)
Name: NF14346_high_33
Description: NF14346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14346_high_33 |
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Alignment Details
Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 32817136 - 32817378
Alignment:
| Q |
1 |
tacctactagcaagtcaagaagaatattgattgctataaaccatatacacctcttaattcacaaatagaaataaagctagctcttccatttttccaaaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32817136 |
tacctactagcaagtcaagaagaatattgattgctacaaaccatatacacctcttaattcacaaatagaaataaagctagctcttccatttttccaaaaa |
32817235 |
T |
|
| Q |
101 |
cataggtgattttagacataaagtagtgaaagtgtagccacatcatatctctaatgtttattgcctgaaagagggagactaaaattcattagagaaaagg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |
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| T |
32817236 |
cataggtgattttagacataaagtagtgaaagtgtagccacatcatatctctaatgtttattgcctgaaagaaggagactaaaactcattagaggaaagg |
32817335 |
T |
|
| Q |
201 |
aagtaataactttttccatgtcacattgaccccatattcttgg |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32817336 |
aagtaataactttttccatgtcacattgaccccatattcttgg |
32817378 |
T |
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