View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14346_high_5 (Length: 553)

Name: NF14346_high_5
Description: NF14346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14346_high_5
NF14346_high_5
[»] chr7 (38 HSPs)
chr7 (27-538)||(25688655-25689161)
chr7 (325-541)||(8929447-8929662)
chr7 (382-524)||(5197953-5198095)
chr7 (263-523)||(8062786-8063050)
chr7 (391-524)||(18942832-18942965)
chr7 (376-523)||(27080850-27080997)
chr7 (376-523)||(27197304-27197451)
chr7 (335-498)||(30839839-30840002)
chr7 (349-523)||(38838560-38838733)
chr7 (473-524)||(19303520-19303571)
chr7 (457-524)||(39129059-39129126)
chr7 (349-489)||(1247517-1247655)
chr7 (445-524)||(40355003-40355082)
chr7 (368-441)||(14669492-14669565)
chr7 (333-438)||(32996500-32996605)
chr7 (445-524)||(5362338-5362417)
chr7 (338-433)||(25618160-25618255)
chr7 (450-505)||(39608428-39608483)
chr7 (458-493)||(41395629-41395664)
chr7 (338-403)||(1052388-1052453)
chr7 (448-493)||(30601494-30601539)
chr7 (450-498)||(3116915-3116963)
chr7 (445-489)||(26905152-26905196)
chr7 (348-403)||(5362469-5362524)
chr7 (340-438)||(12849716-12849814)
chr7 (448-498)||(27376342-27376392)
chr7 (445-487)||(29197030-29197072)
chr7 (367-437)||(46720016-46720086)
chr7 (456-505)||(8252311-8252360)
chr7 (445-490)||(32996365-32996410)
chr7 (368-437)||(39608353-39608422)
chr7 (445-517)||(1344444-1344516)
chr7 (369-413)||(5429520-5429564)
chr7 (476-524)||(6983369-6983417)
chr7 (335-403)||(18942742-18942810)
chr7 (447-507)||(23474708-23474768)
chr7 (448-520)||(34703726-34703798)
chr7 (349-405)||(37502186-37502242)
[»] chr1 (40 HSPs)
chr1 (258-538)||(9890600-9890882)
chr1 (257-537)||(8068875-8069161)
chr1 (349-538)||(49880067-49880255)
chr1 (367-507)||(27463762-27463902)
chr1 (371-490)||(31738317-31738435)
chr1 (399-538)||(45919830-45919969)
chr1 (429-538)||(47921873-47921982)
chr1 (355-505)||(40872658-40872805)
chr1 (382-526)||(52361952-52362096)
chr1 (445-538)||(32743263-32743356)
chr1 (445-516)||(6541106-6541177)
chr1 (355-438)||(8778977-8779060)
chr1 (445-493)||(34826995-34827043)
chr1 (350-437)||(51660441-51660528)
chr1 (335-405)||(36144790-36144860)
chr1 (371-464)||(16658227-16658320)
chr1 (445-489)||(3048070-3048114)
chr1 (369-437)||(32743103-32743171)
chr1 (347-438)||(27900636-27900727)
chr1 (447-494)||(38267346-38267393)
chr1 (368-438)||(14926322-14926392)
chr1 (445-487)||(19464414-19464456)
chr1 (445-505)||(5043428-5043488)
chr1 (445-493)||(7151938-7151986)
chr1 (350-438)||(34826817-34826904)
chr1 (445-489)||(51273374-51273418)
chr1 (450-505)||(5529808-5529863)
chr1 (390-437)||(5529869-5529916)
chr1 (452-490)||(8241826-8241864)
chr1 (454-524)||(30050536-30050606)
chr1 (340-438)||(39330198-39330296)
chr1 (448-538)||(50155711-50155801)
chr1 (334-403)||(10018708-10018776)
chr1 (456-489)||(33747861-33747894)
chr1 (349-434)||(45679523-45679608)
chr1 (382-439)||(45679735-45679792)
chr1 (390-438)||(6541269-6541317)
chr1 (349-441)||(7152057-7152149)
chr1 (336-409)||(19954553-19954622)
chr1 (445-489)||(36144983-36145027)
[»] chr8 (30 HSPs)
chr8 (349-524)||(33590111-33590286)
chr8 (349-538)||(1249113-1249303)
chr8 (349-526)||(36754659-36754836)
chr8 (364-538)||(7680862-7681036)
chr8 (338-523)||(4586758-4586941)
chr8 (335-441)||(3714732-3714838)
chr8 (443-524)||(26018685-26018766)
chr8 (409-507)||(41303047-41303144)
chr8 (367-426)||(6394086-6394145)
chr8 (445-524)||(24017993-24018072)
chr8 (448-526)||(21602112-21602190)
chr8 (450-531)||(33508620-33508701)
chr8 (446-487)||(42659934-42659975)
chr8 (335-443)||(6915508-6915615)
chr8 (445-489)||(7604022-7604066)
chr8 (443-498)||(21600522-21600577)
chr8 (348-445)||(18080438-18080535)
chr8 (349-422)||(41302650-41302723)
chr8 (445-493)||(18080380-18080428)
chr8 (445-524)||(3093884-3093963)
chr8 (445-504)||(3662430-3662489)
chr8 (371-438)||(7603934-7604001)
chr8 (367-441)||(15822831-15822905)
chr8 (448-525)||(6393875-6393952)
chr8 (445-490)||(16338267-16338312)
chr8 (445-489)||(2987008-2987052)
chr8 (445-493)||(21145494-21145542)
chr8 (445-493)||(28802466-28802514)
chr8 (379-439)||(41303148-41303208)
chr8 (453-489)||(42844961-42844997)
[»] chr2 (28 HSPs)
chr2 (338-525)||(7165657-7165844)
chr2 (349-538)||(31967448-31967637)
chr2 (382-507)||(17742514-17742638)
chr2 (362-520)||(41746424-41746582)
chr2 (445-537)||(6788301-6788393)
chr2 (448-538)||(40124344-40124434)
chr2 (445-523)||(15301520-15301598)
chr2 (371-506)||(20966057-20966184)
chr2 (335-438)||(6788484-6788587)
chr2 (351-437)||(13478769-13478855)
chr2 (333-403)||(14441139-14441209)
chr2 (335-409)||(14524200-14524273)
chr2 (445-498)||(13242535-13242588)
chr2 (445-498)||(15816895-15816948)
chr2 (382-435)||(19206503-19206556)
chr2 (445-489)||(8940070-8940114)
chr2 (445-493)||(39002943-39002991)
chr2 (371-441)||(7165604-7165675)
chr2 (445-524)||(21603505-21603584)
chr2 (367-438)||(34883935-34884006)
chr2 (382-428)||(42657800-42657846)
chr2 (445-490)||(30256234-30256279)
chr2 (443-508)||(43191851-43191916)
chr2 (445-489)||(1901620-1901664)
chr2 (338-418)||(15301604-15301684)
chr2 (445-489)||(19206435-19206479)
chr2 (456-524)||(33261005-33261073)
chr2 (445-489)||(41450445-41450489)
[»] chr4 (60 HSPs)
chr4 (349-538)||(6552424-6552613)
chr4 (299-489)||(7616900-7617094)
chr4 (335-524)||(26499284-26499473)
chr4 (338-526)||(312587-312775)
chr4 (349-524)||(13834421-13834596)
chr4 (349-524)||(45615621-45615796)
chr4 (335-538)||(38932640-38932843)
chr4 (338-524)||(51150934-51151119)
chr4 (371-524)||(47097342-47097495)
chr4 (367-507)||(56095131-56095270)
chr4 (380-498)||(48827959-48828077)
chr4 (371-520)||(8755828-8755972)
chr4 (445-524)||(11839862-11839941)
chr4 (349-523)||(32933984-32934151)
chr4 (351-480)||(35255419-35255548)
chr4 (367-523)||(40407493-40407649)
chr4 (445-526)||(24806663-24806744)
chr4 (347-435)||(1758467-1758555)
chr4 (422-538)||(6552897-6553013)
chr4 (445-524)||(8170894-8170973)
chr4 (445-524)||(9297445-9297524)
chr4 (445-520)||(17381483-17381558)
chr4 (355-442)||(46216966-46217052)
chr4 (445-524)||(55132361-55132440)
chr4 (443-489)||(51234394-51234440)
chr4 (448-489)||(971972-972013)
chr4 (445-494)||(48973336-48973385)
chr4 (337-437)||(32123783-32123882)
chr4 (380-439)||(51150890-51150949)
chr4 (367-441)||(17381545-17381619)
chr4 (448-490)||(36409656-36409698)
chr4 (448-490)||(36423822-36423864)
chr4 (446-524)||(38080870-38080948)
chr4 (348-438)||(46804773-46804863)
chr4 (492-537)||(7616827-7616872)
chr4 (349-438)||(13834346-13834435)
chr4 (457-498)||(29223236-29223277)
chr4 (355-439)||(972104-972188)
chr4 (379-439)||(11840031-11840091)
chr4 (445-493)||(33860290-33860338)
chr4 (450-493)||(924751-924794)
chr4 (477-524)||(1758393-1758440)
chr4 (335-438)||(12922431-12922534)
chr4 (470-525)||(14945562-14945617)
chr4 (348-403)||(27395682-27395737)
chr4 (443-498)||(31903371-31903426)
chr4 (335-438)||(40317762-40317865)
chr4 (335-438)||(40327836-40327939)
chr4 (335-438)||(42375231-42375334)
chr4 (448-523)||(51003588-51003662)
chr4 (451-489)||(9057383-9057421)
chr4 (380-438)||(24806521-24806579)
chr4 (351-401)||(30623744-30623794)
chr4 (379-437)||(32934139-32934197)
chr4 (450-523)||(7912573-7912646)
chr4 (368-405)||(20217484-20217521)
chr4 (445-526)||(29116318-29116399)
chr4 (355-435)||(8170962-8171042)
chr4 (445-489)||(33360943-33360987)
chr4 (342-406)||(41679200-41679263)
[»] scaffold0284 (1 HSPs)
scaffold0284 (349-538)||(2447-2636)
[»] scaffold0114 (1 HSPs)
scaffold0114 (349-536)||(34928-35115)
[»] scaffold0211 (1 HSPs)
scaffold0211 (349-538)||(20064-20253)
[»] chr6 (25 HSPs)
chr6 (368-533)||(26293407-26293572)
chr6 (367-541)||(17848683-17848857)
chr6 (349-538)||(21237176-21237365)
chr6 (371-524)||(25084944-25085097)
chr6 (349-521)||(6524863-6525029)
chr6 (450-505)||(10067659-10067714)
chr6 (445-520)||(16431590-16431665)
chr6 (456-525)||(21021037-21021106)
chr6 (367-440)||(10067491-10067564)
chr6 (445-490)||(24285103-24285148)
chr6 (443-505)||(9307395-9307457)
chr6 (347-439)||(19264719-19264810)
chr6 (382-438)||(25085083-25085139)
chr6 (391-438)||(10219598-10219645)
chr6 (379-438)||(17848826-17848885)
chr6 (449-524)||(28995472-28995547)
chr6 (473-523)||(20565733-20565783)
chr6 (379-437)||(22260412-22260470)
chr6 (445-503)||(31142031-31142089)
chr6 (333-386)||(7514930-7514983)
chr6 (379-436)||(12291631-12291688)
chr6 (445-489)||(28747971-28748015)
chr6 (445-505)||(31315216-31315276)
chr6 (450-490)||(33806854-33806894)
chr6 (379-435)||(34806657-34806713)
[»] chr5 (33 HSPs)
chr5 (349-538)||(9023255-9023444)
chr5 (355-524)||(27769864-27770033)
chr5 (377-507)||(11497891-11498021)
chr5 (377-507)||(11505247-11505377)
chr5 (377-507)||(11512641-11512771)
chr5 (377-507)||(11520017-11520147)
chr5 (377-507)||(11527425-11527555)
chr5 (377-507)||(11534831-11534961)
chr5 (445-526)||(8206226-8206307)
chr5 (335-438)||(6217385-6217488)
chr5 (371-438)||(37853241-37853308)
chr5 (450-524)||(39194894-39194967)
chr5 (368-441)||(17676566-17676639)
chr5 (371-464)||(28903780-28903873)
chr5 (371-464)||(28940175-28940268)
chr5 (367-438)||(22579502-22579573)
chr5 (445-524)||(27001210-27001289)
chr5 (340-426)||(27001396-27001482)
chr5 (335-403)||(26675302-26675370)
chr5 (335-403)||(26946910-26946978)
chr5 (359-439)||(31949277-31949357)
chr5 (367-438)||(27554314-27554385)
chr5 (357-403)||(29686453-29686499)
chr5 (349-439)||(32270643-32270733)
chr5 (445-490)||(917091-917136)
chr5 (257-302)||(9023150-9023195)
chr5 (445-486)||(14460085-14460126)
chr5 (445-489)||(8814181-8814225)
chr5 (335-439)||(14461769-14461873)
chr5 (355-403)||(19342549-19342597)
chr5 (457-509)||(29502366-29502418)
chr5 (445-489)||(29686625-29686669)
chr5 (349-441)||(42420524-42420615)
[»] chr3 (31 HSPs)
chr3 (349-538)||(50239776-50239963)
chr3 (335-538)||(7672342-7672541)
chr3 (378-481)||(43838486-43838589)
chr3 (445-524)||(34979109-34979188)
chr3 (445-524)||(46008619-46008698)
chr3 (445-505)||(14984519-14984579)
chr3 (347-437)||(40618890-40618980)
chr3 (451-522)||(53705891-53705962)
chr3 (340-438)||(40619188-40619286)
chr3 (351-436)||(21568322-21568407)
chr3 (445-538)||(23195655-23195748)
chr3 (369-438)||(23195720-23195789)
chr3 (335-439)||(30843801-30843905)
chr3 (445-492)||(37326760-37326807)
chr3 (348-438)||(1324508-1324598)
chr3 (445-494)||(30843663-30843712)
chr3 (445-497)||(3941666-3941718)
chr3 (447-503)||(14194858-14194914)
chr3 (445-489)||(40954485-40954529)
chr3 (356-428)||(45681395-45681467)
chr3 (335-438)||(34294103-34294206)
chr3 (349-439)||(43837102-43837192)
chr3 (445-503)||(47199894-47199952)
chr3 (460-498)||(54558395-54558433)
chr3 (445-522)||(1183150-1183227)
chr3 (445-498)||(26499840-26499893)
chr3 (469-498)||(34293960-34293989)
chr3 (445-486)||(39336716-39336757)
chr3 (378-438)||(621857-621917)
chr3 (354-438)||(12832063-12832147)
chr3 (335-435)||(51889762-51889862)
[»] scaffold0252 (1 HSPs)
scaffold0252 (378-524)||(17183-17327)
[»] scaffold0687 (2 HSPs)
scaffold0687 (445-489)||(1706-1750)
scaffold0687 (371-438)||(1618-1685)
[»] scaffold0003 (1 HSPs)
scaffold0003 (335-428)||(329044-329138)
[»] scaffold0050 (1 HSPs)
scaffold0050 (335-439)||(81300-81404)
[»] scaffold0045 (1 HSPs)
scaffold0045 (445-525)||(20628-20707)
[»] scaffold0086 (2 HSPs)
scaffold0086 (450-493)||(21717-21760)
scaffold0086 (367-437)||(21856-21926)
[»] scaffold0002 (1 HSPs)
scaffold0002 (445-524)||(349129-349208)


Alignment Details
Target: chr7 (Bit Score: 372; Significance: 0; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 27 - 538
Target Start/End: Original strand, 25688655 - 25689161
Alignment:
Q  27 cgaatctgagactctaagaaaaatattccatggtttcagatcaacaccactaaaccatcctaaataggtttgaacaaagaaatcatataattgaccaaac 126  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||| |||||||||||||    |||||||    
T  25688655 cgaatctgagactctaagaaaaatattccatggttccaaatcaacaccactaaaccatcttaaataggtttgaacgaagaaatcatatagagtaccaaac 25688754  T
Q  127 tcatatccataatgtgaaaagtggctttccaatcgcatgttaaccttttacacattgtccacacagtagcactaagactaaaatctcttgttcgtgtatc 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  || ||||||||| |||||||||||||||    
T  25688755 tcatatccataatgtgaaaagtggctttccaatcgcatgttaaccttttacacattgtccacccagtagc--taggactaaaatatcttgttcgtgtatc 25688852  T
Q  227 tctcttcaagaacaaaagtaagagtagagacaggggcggatctactataggactatgtggggctttagccccacatccaacttctctatttctt-ttatt 325  Q
    |||||||||||||||||||||||||||||||  |||||||| |||| |||||||||||||||||  ||||||||||||||||||||||||| || |||||    
T  25688853 tctcttcaagaacaaaagtaagagtagagac--gggcggatatactttaggactatgtggggctaaagccccacatccaacttctctattttttattatt 25688950  T
Q  326 atattattggtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgtt 425  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  25688951 atattattggttattttgattcttgaatgtgtaatgaataatcacaatagtctctcaatgtattaaaattctaaaataatttctgattttgcactttgtt 25689050  T
Q  426 agttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaat 525  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25689051 agttaaaatagtcccttaaatgataataagtaagtatatttaatg--taatatgacaatattaacgaagtattctaatgttaatgattattttgactaat 25689148  T
Q  526 ggaatgtacaatc 538  Q
    |||||||| ||||    
T  25689149 ggaatgtataatc 25689161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 325 - 541
Target Start/End: Original strand, 8929447 - 8929662
Alignment:
Q  325 tatattattggtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgt 424  Q
    ||||||||| ||||||||  || |||||  ||||| ||||||| |||| | ||| | |||||||||||||||||||||| ||  ||||||||||||||||    
T  8929447 tatattattagtcattttagtttttgaacgtgtaa-gaataattacaacagtcttttaatgtattaaaattttaaaatagtttttgattttgcactttgt 8929545  T
Q  425 tagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||| |||||||||| |||||||||| ||| |||||||| ||||||| |||| ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  8929546 tagtcaaaatagtccattaaatgacagtaaataagtatactgaatgactaatttgataatattaacgaagtattctaatgttaaggattattttgactaa 8929645  T
Q  525 tggaatgtacaatctga 541  Q
     | ||||||||||||||    
T  8929646 cgaaatgtacaatctga 8929662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 382 - 524
Target Start/End: Original strand, 5197953 - 5198095
Alignment:
Q  382 aatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaatatgac 481  Q
    ||||||||| |||||||||||| || || |||||||||||||||||| |||||||||| | ||   ||||||| ||||||||||||| || |||||||||    
T  5197953 aatgtattagaattttaaaatagtttctcattttgcactttgttagtcaaaatagtccctgaagcaacaataaataagtatattgaaagactaatatgac 5198052  T
Q  482 aatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||| |||||||| ||||||||  |||||||||||||||    
T  5198053 aatattaatgaagtattttaatgttagagattattttgactaa 5198095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 263 - 523
Target Start/End: Complemental strand, 8063050 - 8062786
Alignment:
Q  263 cggatctactataggactatgtggggctttagccccacatccaacttctctatttctttt-------attatattattggtcattttgattcttgaatat 355  Q
    |||||| | |||||| ||||||||||||  |||||||||||||||||| |||||| ||||       | |||  || | || |||||| | ||||||| |    
T  8063050 cggatccattatagggctatgtggggctaaagccccacatccaacttccctatttttttttatcataaatatggtaatagttattttggtccttgaatgt 8062951  T
Q  356 gtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataag 455  Q
    |||| || || |||||||| ||| |||||||||||||||||||||||| |  ||||||||||||||  ||||| ||||||  |||| || ||||||| ||    
T  8062950 gtaacgagtagtcacaatagtctgtcaatgtattaaaattttaaaatagtatctgattttgcactt--ttagtcaaaata-accttgaagtgacaatgag 8062854  T
Q  456 taagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgacta 523  Q
    |||||||||| || || |||||||||||||||||| || |||| ||||||||  || |||||||||||    
T  8062853 taagtatattaaaagactaatatgacaatattaacaaattattttaatgttatggactattttgacta 8062786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 391 - 524
Target Start/End: Complemental strand, 18942965 - 18942832
Alignment:
Q  391 aaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaac 490  Q
    ||||| ||||||| |  ||||||||||| ||| ||| | |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18942965 aaattctaaaatagtctctgattttgcattttattaatcaaaataatccatgaaatgacaataagtaagtatattgaatgattaatatgacaatattaac 18942866  T
Q  491 gaagtattctaatgttaatgattattttgactaa 524  Q
    || ||||| ||||||||  || ||||| ||||||    
T  18942865 gacgtattttaatgttagagactatttggactaa 18942832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 376 - 523
Target Start/End: Complemental strand, 27080997 - 27080850
Alignment:
Q  376 tctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaa 475  Q
    ||||| |||||||||||||| |||||||     ||||||| |||||||||| | |||||||||||| || ||| |||||||||||||  |||| ||||||    
T  27080997 tctctaaatgtattaaaattctaaaatagactttgatttttcactttgttattcaaaatagtccttgaagtgataataagtaagtatgctgaaggattaa 27080898  T
Q  476 tatgacaatattaacgaagtattctaatgttaatgattattttgacta 523  Q
    ||||| |||||||| |||||||| ||||||||  || |||||||||||    
T  27080897 tatgataatattaaagaagtattttaatgttatggactattttgacta 27080850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 376 - 523
Target Start/End: Original strand, 27197304 - 27197451
Alignment:
Q  376 tctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaa 475  Q
    ||||| |||||||||||||| |||||||     ||||||| |||||||||| | |||||||||||| || ||| |||||||||||||  |||| ||||||    
T  27197304 tctctaaatgtattaaaattctaaaatagactttgatttttcactttgttattcaaaatagtccttgaagtgataataagtaagtatgctgaaggattaa 27197403  T
Q  476 tatgacaatattaacgaagtattctaatgttaatgattattttgacta 523  Q
    ||||| |||||||| |||||||| ||||||||  || |||||||||||    
T  27197404 tatgataatattaaagaagtattttaatgttatggactattttgacta 27197451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 335 - 498
Target Start/End: Complemental strand, 30840002 - 30839839
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    ||||||||| | | ||||| | ||| ||||| | |||||| |||||||||||| || || ||||||||| | |||||||||  | ||| |||||||||||    
T  30840002 gtcattttggtccctgaatgtataacgaatagttacaatagtctctcaatgtaatataaatttaaaatagtccctgattttaaattttattagttaaaat 30839903  T
Q  435 agtcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtatt 498  Q
    ||||  | |||||| ||||| |||||||| |||| || |||||||||||| |||||||||||||    
T  30839902 agtctctaaaatgataataaataagtatactgaaggactaatatgacaatgttaacgaagtatt 30839839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 523
Target Start/End: Complemental strand, 38838733 - 38838560
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    ||||| ||||| || || |||||||| ||| |||||||||||||||||||||||| |  ||||||||||| ||||||||| ||||||| || | ||  ||    
T  38838733 tgaatgtgtaacgagtagtcacaatattctatcaatgtattaaaattttaaaatagtctctgattttgcattttgttagtcaaaatag-ccctgaagaga 38838635  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgacta 523  Q
    |||   ||||||||||| || || ||| |||| ||||||||| || |||| |||| |||  || |||||||||||    
T  38838634 caactggtaagtatattaaaagactaacatgataatattaacaaattattttaatattagggactattttgacta 38838560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 19303520 - 19303571
Alignment:
Q  473 taatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  19303520 taatatgacaatattaacaaaatattctaatgttaatgattattttgactaa 19303571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 457 - 524
Target Start/End: Complemental strand, 39129126 - 39129059
Alignment:
Q  457 aagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    ||||||||||||||| |||||||||||||||||| || |||| |||| | ||||||||||||||||||    
T  39129126 aagtatattgaatgactaatatgacaatattaacaaaatattttaatatcaatgattattttgactaa 39129059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 489
Target Start/End: Original strand, 1247517 - 1247655
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    ||||||||||| || || |||||||| | ||| ||||||||||||||||||||| | || ||||||||| ||||| || | ||||||| || | || |||    
T  1247517 tgaatatgtaacgagtagtcacaatagtttcttaatgtattaaaattttaaaat-agtcttgattttgcgctttgctaatcaaaatag-ccctgaagtga 1247614  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||  |||| ||||||| || || |||||||||||||||||    
T  1247615 caactagtatgtatattaaaagactaatatgacaatattaa 1247655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 524
Target Start/End: Original strand, 40355003 - 40355082
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    ||||||||||||| |||||| |||  | ||||||||||||||||| ||||| || |||||| ||||| ||||||||||||    
T  40355003 atgacaataagtatgtatatagaagaactaatatgacaatattaatgaagtgttttaatgtaaatgactattttgactaa 40355082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 14669565 - 14669492
Alignment:
Q  368 cacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctt 441  Q
    ||||||| ||||||||||||| |||||| ||||||| ||| ||||| |||||| ||||||| ||| ||||||||    
T  14669565 cacaatagtctctcaatgtatcaaaattctaaaatagttcttgattgtgcactctgttagtcaaagtagtcctt 14669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 438
Target Start/End: Complemental strand, 32996605 - 32996500
Alignment:
Q  333 tggtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaa 432  Q
    ||||||||||| | ||||||| | ||||||||| | |||||| || ||||||| || |||||| ||||||| |  |||||| |||||||||||| | |||    
T  32996605 tggtcattttggtccttgaatgtctaatgaatagtgacaatagtccctcaatgcatcaaaattctaaaatagtctctgattgtgcactttgttaatcaaa 32996506  T
Q  433 atagtc 438  Q
    ||||||    
T  32996505 atagtc 32996500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 524
Target Start/End: Complemental strand, 5362417 - 5362338
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||| ||||| ||||||||||||| || ||||||||| |||||||||||||||| |||| | |  || ||||||||||||    
T  5362417 atgataataaataagtatattgaaggactaatatgaccatattaacgaagtattttaatatcagggactattttgactaa 5362338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 433
Target Start/End: Complemental strand, 25618255 - 25618160
Alignment:
Q  338 attttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaa 433  Q
    |||||| ||||||||| ||||| || || ||||| || | |  ||||||||||||||||||||||| ||  |||||||||| ||||||||| ||||    
T  25618255 attttggttcttgaatgtgtaacgattagtcacagtagttttgcaatgtattaaaattttaaaatagtttatgattttgcattttgttagtcaaaa 25618160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 505
Target Start/End: Complemental strand, 39608483 - 39608428
Alignment:
Q  450 aataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgt 505  Q
    |||||||||||||| ||||||| |||||||||||||||||  ||||||| ||||||    
T  39608483 aataagtaagtatactgaatgactaatatgacaatattaatcaagtattttaatgt 39608428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 458 - 493
Target Start/End: Complemental strand, 41395664 - 41395629
Alignment:
Q  458 agtatattgaatgattaatatgacaatattaacgaa 493  Q
    ||||||||||||||||||||||||||||||||||||    
T  41395664 agtatattgaatgattaatatgacaatattaacgaa 41395629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 1052388 - 1052453
Alignment:
Q  338 attttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaata 403  Q
    ||||||||  |||||||||||| |||||| ||||||||| | | ||||||| ||||||||||||||    
T  1052388 attttgatatttgaatatgtaacgaataaccacaataattttttaatgtatcaaaattttaaaata 1052453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 448 - 493
Target Start/End: Original strand, 30601494 - 30601539
Alignment:
Q  448 acaataagtaagtatattgaatgattaatatgacaatattaacgaa 493  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  30601494 acaataagtaagtatatcgaacgattaatatgacaatattatcgaa 30601539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 498
Target Start/End: Complemental strand, 3116963 - 3116915
Alignment:
Q  450 aataagtaagtatattgaatgattaatatgacaatattaacgaagtatt 498  Q
    ||||||||||||||||||| || ||||||||||||||||| ||| ||||    
T  3116963 aataagtaagtatattgaaagactaatatgacaatattaatgaaatatt 3116915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 26905152 - 26905196
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||||||||||||||||||||| || |||||||| ||||||||    
T  26905152 atgacaataagtaagtatattgaaggaataatatgataatattaa 26905196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 403
Target Start/End: Complemental strand, 5362524 - 5362469
Alignment:
Q  348 ttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaata 403  Q
    |||||||||||| || || |||||||||||  ||||||||| ||||||||||||||    
T  5362524 ttgaatatgtaaggagtagtcacaataatcattcaatgtatcaaaattttaaaata 5362469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 438
Target Start/End: Complemental strand, 12849814 - 12849716
Alignment:
Q  340 tttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||| ||||||||| || ||||| || |||||||| ||| | ||||||| ||||||  |||||| |  |||||| ||||||||||||||  ||||||||    
T  12849814 tttggttcttgaatgtgcaatgagtagtcacaatagtcttttaatgtatcaaaattacaaaatagtctctgattgtgcactttgttagtcgaaatagtc 12849716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 498
Target Start/End: Complemental strand, 27376392 - 27376342
Alignment:
Q  448 acaataagtaagtatattgaatgattaatatgacaatattaacgaagtatt 498  Q
    |||||||||||||||||||||  | |||||||| |||||||||||| ||||    
T  27376392 acaataagtaagtatattgaaaaactaatatgataatattaacgaaatatt 27376342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 29197072 - 29197030
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatatt 487  Q
    |||||||||||||||||||||||| || | |||||||||||||    
T  29197072 atgacaataagtaagtatattgaaagactgatatgacaatatt 29197030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 437
Target Start/End: Complemental strand, 46720086 - 46720016
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    |||||||| || ||||||||||| ||||||||||||  |   ||||| |||||||||||||| ||||||||    
T  46720086 tcacaatagtccctcaatgtattgaaattttaaaatggtatttgattgtgcactttgttagtcaaaatagt 46720016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 505
Target Start/End: Original strand, 8252311 - 8252360
Alignment:
Q  456 taagtatattgaatgattaatatgacaatattaacgaagtattctaatgt 505  Q
    |||||||||||||||| ||||| |||||||||||| | ||||| ||||||    
T  8252311 taagtatattgaatgactaatacgacaatattaacaatgtattttaatgt 8252360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Complemental strand, 32996410 - 32996365
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaac 490  Q
    |||| ||||| ||||||||||||| || ||||||||||||||||||    
T  32996410 atgataataaataagtatattgaaggactaatatgacaatattaac 32996365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 437
Target Start/End: Original strand, 39608353 - 39608422
Alignment:
Q  368 cacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    ||||||| |||||||||||||  |||||| ||||||||   ||||  ||||||| |||||||||||||||    
T  39608353 cacaatagtctctcaatgtatcgaaatttcaaaataatcattgatcgtgcacttcgttagttaaaatagt 39608422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 517
Target Start/End: Complemental strand, 1344516 - 1344444
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattt 517  Q
    |||||| ||| ||||||||||||| || | || |||||||||||| |||||||| |||| | || ||||||||    
T  1344516 atgacattaaataagtatattgaaggactgatgtgacaatattaatgaagtattttaatatcaaagattattt 1344444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 413
Target Start/End: Complemental strand, 5429564 - 5429520
Alignment:
Q  369 acaataatctctcaatgtattaaaattttaaaataattcctgatt 413  Q
    ||||||||  |||||||||| |||||||||||||| |||||||||    
T  5429564 acaataattcctcaatgtatcaaaattttaaaatagttcctgatt 5429520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 476 - 524
Target Start/End: Complemental strand, 6983417 - 6983369
Alignment:
Q  476 tatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||||||||||| |||| |||||| ||  ||||||||||||||    
T  6983417 tatgacaatattaacgaaatattttaatgtgaaatattattttgactaa 6983369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 403
Target Start/End: Original strand, 18942742 - 18942810
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaata 403  Q
    ||||||||| | | ||||| ||||| ||||| ||| |||| || |||||||||| ||||||||||||||    
T  18942742 gtcattttggtccctgaatgtgtaaggaatagtcataatagtcactcaatgtatcaaaattttaaaata 18942810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 507
Target Start/End: Original strand, 23474708 - 23474768
Alignment:
Q  447 gacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgtta 507  Q
    |||||||||||| ||||| ||  ||||||||||| |||||||| ||| |||| ||||||||    
T  23474708 gacaataagtaaatatatcgatggattaatatgaaaatattaatgaaatattttaatgtta 23474768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 520
Target Start/End: Complemental strand, 34703798 - 34703726
Alignment:
Q  448 acaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttga 520  Q
    |||||||||||||||| |||| || ||||||||||||||| || || |||| ||| ||||  || ||||||||    
T  34703798 acaataagtaagtatactgaaagactaatatgacaatattgacaaaatattttaaagttagagactattttga 34703726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 37502186 - 37502242
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataat 405  Q
    ||||| ||||| |||||| ||||||||||| | ||| ||| ||||||||||||||||    
T  37502186 tgaatgtgtaacgaataaccacaataatcttttaatatatcaaaattttaaaataat 37502242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 4e-70; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 258 - 538
Target Start/End: Complemental strand, 9890882 - 9890600
Alignment:
Q  258 aggggcggatctactataggactatgtggggctttagccccacatccaacttctctatttcttttattatat------tattggtcattttgattcttga 351  Q
    |||||||||||||||  | ||||||||||||||  ||||||||||||||||||||||||| ||| ||||||       | || ||||||||| ||| |||    
T  9890882 aggggcggatctactcaatgactatgtggggctaaagccccacatccaacttctctatttttttaattataagtagagtgttagtcattttggttcctga 9890783  T
Q  352 atatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaa 451  Q
    || || || || ||||||||||| |||||||||||||||||||| |||||||  || |||||||||||||||||||| |||||||||| |||||||||||    
T  9890782 atgtggaacgattaatcacaatagtctctcaatgtattaaaattctaaaatagatcatgattttgcactttgttagtcaaaatagtcccttaaatgacaa 9890683  T
Q  452 taagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    ||    ||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  9890682 ta----agtatattgaaggactaatatgacaatattaacgaagtattctaatgttaaggattattttgactaacgaaatgtacaatc 9890600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 257 - 537
Target Start/End: Original strand, 8068875 - 8069161
Alignment:
Q  257 caggggcggatctactataggactatgtggggctttagccccacatccaacttctctatttcttttattatat--------tattggtcattttgattct 348  Q
    ||||||||||||||||  | ||||||||||||||  ||||||||||||||||||| ||||| ||||||  |||        ||||  | ||||| || |     
T  8068875 caggggcggatctactcaaagactatgtggggctaaagccccacatccaacttctttattttttttatattataaataaggtattacttattttaatcca 8068974  T
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    ||||| ||||| |||||||||||||| | | |||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| ||| | ||||||||    
T  8068975 tgaatgtgtaacgaataatcacaatagttt-tcaatgtattaaaattctaaaatagttcatgattttgcactttgttagtcaaaa-agttccttaaatga 8069072  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaat 537  Q
     ||||||||||||||||||  ||||||||||||||||||||| || |||| |||| |||| ||||||||||||||| | ||||||||||    
T  8069073 taataagtaagtatattgatggattaatatgacaatattaacaaaatattttaatattaaggattattttgactaacgaaatgtacaat 8069161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 349 - 538
Target Start/End: Original strand, 49880067 - 49880255
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    |||||||||||| |||| ||| |||||||||||| ||||||||| || ||||||||| | |||||||| ||||||||||| | |||||||| | || |||    
T  49880067 tgaatatgtaataaatagtcataataatctctcagtgtattaaa-ttctaaaataatccatgattttgtactttgttagtcataatagtccctgaagtga 49880165  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    |||||||||||||||||||| || |||||||||||||| || |||||||| ||||||||  || |||||||||||||| | |||||||||    
T  49880166 caataagtaagtatattgaaagactaatatgacaatatcaatgaagtattttaatgttagggactattttgactaatgaagtgtacaatc 49880255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 367 - 507
Target Start/End: Original strand, 27463762 - 27463902
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattg 466  Q
    ||||| || |||||||||||||||||||| ||||||| |  || |||||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  27463762 tcacattattctctcaatgtattaaaattctaaaatagtctctaattttgcactttgttagtcaaaatagtctttgaaatgacaataagtaagtatattg 27463861  T
Q  467 aatgattaatatgacaatattaacgaagtattctaatgtta 507  Q
    || || |||||| ||||||||||| ||||||| ||| ||||    
T  27463862 aaagactaatataacaatattaacaaagtattttaacgtta 27463902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 371 - 490
Target Start/End: Complemental strand, 31738435 - 31738317
Alignment:
Q  371 aataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatg 470  Q
    |||||||||||||||||||| |||||||||||||||  |||||||| ||||||||||| |||||||||| | || ||||||||| |||||||||| ||||    
T  31738435 aataatctctcaatgtattagaattttaaaataatttttgattttgtactttgttagtcaaaatagtcc-tgaagtgacaataaataagtatattaaatg 31738337  T
Q  471 attaatatgacaatattaac 490  Q
    ||||||||||||||||||||    
T  31738336 attaatatgacaatattaac 31738317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 399 - 538
Target Start/End: Complemental strand, 45919969 - 45919830
Alignment:
Q  399 aaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtatt 498  Q
    ||||||||| |||||||| ||||||||||| | |||||||| | || ||||||||||||||||||||||| | | ||||||||||||| || ||||||||    
T  45919969 aaataattcatgattttgtactttgttagtcataatagtccctaaagtgacaataagtaagtatattgaagggtcaatatgacaatatcaatgaagtatt 45919870  T
Q  499 ctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
     ||||||||  ||||||||||||||||| | |||||||||    
T  45919869 ttaatgttagggattattttgactaatgaagtgtacaatc 45919830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 429 - 538
Target Start/End: Original strand, 47921873 - 47921982
Alignment:
Q  429 taaaatagtcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatgga 528  Q
    ||||||||||| | || ||||||||||||||||||||||| | ||||||||| || ||||| |||||||  ||||||||  ||||||||||||||||| |    
T  47921873 taaaatagtccatgaactgacaataagtaagtatattgaagggttaatatgataagattaatgaagtatcataatgttagggattattttgactaatgaa 47921972  T
Q  529 atgtacaatc 538  Q
    ||||||||||    
T  47921973 atgtacaatc 47921982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 505
Target Start/End: Complemental strand, 40872805 - 40872658
Alignment:
Q  355 tgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataa 454  Q
    |||||| |||| ||| |||| ||| |||||||||||||||||||| ||| | |||||||||| |||||||||||    ||||||||| || |||||||||    
T  40872805 tgtaataaatagtcataatagtctttcaatgtattaaaattttaatatagtccctgattttgtactttgttagt---catagtccttgaagtgacaataa 40872709  T
Q  455 gtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgt 505  Q
    |||||||||||  | |  |||||||||||||||||  ||||||| ||||||    
T  40872708 gtaagtatattatagggctaatatgacaatattaattaagtattttaatgt 40872658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 382 - 526
Target Start/End: Original strand, 52361952 - 52362096
Alignment:
Q  382 aatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaatatgac 481  Q
    |||||||||||||||||||||| |  ||||||||||||||| ||| | |||||| ||  | || ||| ||||| ||||||||| |||  | ||||||||     
T  52361952 aatgtattaaaattttaaaatagtctctgattttgcactttattattcaaaataatcaatgaagtgataataaataagtatatcgaagaactaatatgat 52362051  T
Q  482 aatattaacgaagtattctaatgttaatgattattttgactaatg 526  Q
    ||||||||| ||||||| ||||||||| |||||||||||| ||||    
T  52362052 aatattaacaaagtattttaatgttaaagattattttgaccaatg 52362096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 445 - 538
Target Start/End: Original strand, 32743263 - 32743356
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    |||||| ||||||||||||||||||||||||||| | ||||||| |||| |||| |||||| |  ||||||||||||||| | |||||||||||    
T  32743263 atgacagtaagtaagtatattgaatgattaatataagaatattagcgaaatattttaatgtcagagattattttgactaacgaaatgtacaatc 32743356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 445 - 516
Target Start/End: Complemental strand, 6541177 - 6541106
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattatt 516  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||| |||| |||||| || |||||||    
T  6541177 atgacaataagtaagtatattgaaggactaatatgacaatattaacgaaatattttaatgtcaaagattatt 6541106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 355 - 438
Target Start/End: Original strand, 8778977 - 8779060
Alignment:
Q  355 tgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    ||||||||||| |||| ||| || |||||| ||| ||||||| |||||| || |||||| ||||||||||||||||||||||||    
T  8778977 tgtaatgaatagtcacgatagtccctcaatatatcaaaatttcaaaatagtttctgattgtgcactttgttagttaaaatagtc 8779060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 34826995 - 34827043
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaa 493  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||    
T  34826995 atgacaataaataagtatattgaatgactaatatgacaatattaacgaa 34827043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 437
Target Start/End: Original strand, 51660441 - 51660528
Alignment:
Q  350 gaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    |||| ||||||||||||| |||||| ||||| | ||||| ||||||| |||||||| ||||||| || | ||||||||| ||||||||    
T  51660441 gaatgtgtaatgaataataacaatagtctcttagtgtataaaaatttcaaaataatccctgattgtgaaatttgttagtcaaaatagt 51660528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 36144790 - 36144860
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataat 405  Q
    ||||||||| | |||||||||||||||| ||||||||||| |||| |||||||| ||||||  ||||||||    
T  36144790 gtcattttggtccttgaatatgtaatgagtaatcacaatactctcccaatgtatcaaaattccaaaataat 36144860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 464
Target Start/End: Complemental strand, 16658320 - 16658227
Alignment:
Q  371 aataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatat 464  Q
    |||| ||||| |||||||||||||| ||||||| | | |||||||| ||||||||||| | |||||| | | || ||| |||||||||||||||    
T  16658320 aatagtctcttaatgtattaaaattctaaaatagtccgtgattttgtactttgttagtcataatagttcatgaagtgataataagtaagtatat 16658227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 3048114 - 3048070
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  3048114 atgacaataagtaagtaaattgaatgattaatatgacagtattaa 3048070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 437
Target Start/End: Original strand, 32743103 - 32743171
Alignment:
Q  369 acaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    |||||||||| ||||| ||||| |||||||||||| ||||||||| ||| ||| |||||| ||||||||    
T  32743103 acaataatctttcaatttattataattttaaaatagttcctgattgtgctcttggttagtcaaaatagt 32743171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 347 - 438
Target Start/End: Original strand, 27900636 - 27900727
Alignment:
Q  347 cttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    ||||||||| ||| ||||| | |||||| ||||| ||||||| |||||||||||||| | ||||||| |||||| |  |||| |||||||||    
T  27900636 cttgaatatataaagaatagttacaatagtctcttaatgtatcaaaattttaaaatagtccctgattgtgcactctaatagtcaaaatagtc 27900727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 494
Target Start/End: Original strand, 38267346 - 38267393
Alignment:
Q  447 gacaataagtaagtatattgaatgattaatatgacaatattaacgaag 494  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  38267346 gacaataagtaaatatattgaaggattaatatgacaatattaatgaag 38267393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 438
Target Start/End: Original strand, 14926322 - 14926392
Alignment:
Q  368 cacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    ||||||| ||||| ||||||| |||||||||||||| || |||||| |||||| ||||||| ||| |||||    
T  14926322 cacaatagtctctgaatgtatgaaaattttaaaatagttactgattgtgcactatgttagtcaaagtagtc 14926392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 19464414 - 19464456
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatatt 487  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  19464414 atgataataaataagtatattgaatgattaatatgacaatatt 19464456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 505
Target Start/End: Original strand, 5043428 - 5043488
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgt 505  Q
    |||||||||| ||||||||||||||||  ||||| ||||||||||| || |||| ||||||    
T  5043428 atgacaataaataagtatattgaatgaccaatataacaatattaacaaaatattttaatgt 5043488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 7151986 - 7151938
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaa 493  Q
    |||| |||||||||||||||| || || |||||||||||||||||||||    
T  7151986 atgataataagtaagtatattaaaagactaatatgacaatattaacgaa 7151938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 34826817 - 34826904
Alignment:
Q  350 gaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    ||||||||||||  ||||||||||| ||  ||||||||| ||||||||||||| ||  |||||| |||| | ||||||| |||||||||    
T  34826817 gaatatgtaatggttaatcacaatagtccttcaatgtatcaaaattttaaaat-atcactgattgtgcattctgttagtcaaaatagtc 34826904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 51273374 - 51273418
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||||||||||| |||||||| ||| |||||||||||||||||    
T  51273374 atgacaataagtaaatatattgagtgactaatatgacaatattaa 51273418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 505
Target Start/End: Original strand, 5529808 - 5529863
Alignment:
Q  450 aataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgt 505  Q
    |||||||||||||||| ||  | ||||| |||||||||||||||||||| ||||||    
T  5529808 aataagtaagtatatttaagtactaataagacaatattaacgaagtattttaatgt 5529863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 5529916 - 5529869
Alignment:
Q  390 aaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    |||||||||||||||| ||| ||| |||||||||||||| ||||||||    
T  5529916 aaaattttaaaataatccctaattatgcactttgttagtcaaaatagt 5529869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 490
Target Start/End: Complemental strand, 8241864 - 8241826
Alignment:
Q  452 taagtaagtatattgaatgattaatatgacaatattaac 490  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  8241864 taagtaggcatattgaatgattaatatgacaatattaac 8241826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 524
Target Start/End: Original strand, 30050536 - 30050606
Alignment:
Q  454 agtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    ||||||||||||||| | |||||||| ||||||||||||  |||| |||||| |  || ||||||||||||    
T  30050536 agtaagtatattgaagggttaatatgtcaatattaacgagatattttaatgtgagagactattttgactaa 30050606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 438
Target Start/End: Complemental strand, 39330296 - 39330198
Alignment:
Q  340 tttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||| ||||||| |||||||| ||||||||||| | | || |||||| |||| || || ||| | | ||||| |||| || ||||||||||||||||    
T  39330296 tttgatccttgaatgtgtaatgagtaatcacaatagtttttcgatgtatcaaaacttcaatatagtccatgattgtgcaattcgttagttaaaatagtc 39330198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 538
Target Start/End: Original strand, 50155711 - 50155801
Alignment:
Q  448 acaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    ||||||||||||| |||||||  ||| ||| ||||||||||| |||  ||| |||| | | ||| |||||||||||||| | |||||||||    
T  50155711 acaataagtaagtgtattgaagcattgataggacaatattaatgaaacattttaatatcagtgactattttgactaatgaattgtacaatc 50155801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 403
Target Start/End: Original strand, 10018708 - 10018776
Alignment:
Q  334 ggtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaata 403  Q
    |||||||||| ||| |||||||||||  | || |||||||| ||| ||||||||| ||||||||||||||    
T  10018708 ggtcattttg-ttcctgaatatgtaaccagtagtcacaatagtctatcaatgtatcaaaattttaaaata 10018776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 489
Target Start/End: Original strand, 33747861 - 33747894
Alignment:
Q  456 taagtatattgaatgattaatatgacaatattaa 489  Q
    ||||||||||||| ||||||||||||||||||||    
T  33747861 taagtatattgaaggattaatatgacaatattaa 33747894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 434
Target Start/End: Original strand, 45679523 - 45679608
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    ||||| ||||| || || |||||||||||  |||| ||||||||||||||||||| ||  ||||| |||||| | ||||| |||||    
T  45679523 tgaatgtgtaacgagtagtcacaataatccatcaacgtattaaaattttaaaatagtttttgattgtgcactctattagtcaaaat 45679608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 439
Target Start/End: Complemental strand, 45679792 - 45679735
Alignment:
Q  382 aatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcc 439  Q
    ||||||| |||||||||||||| ||| ||||| |||| || |||||| ||||||||||    
T  45679792 aatgtataaaaattttaaaatagttcatgattgtgcaattcgttagtcaaaatagtcc 45679735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 6541317 - 6541269
Alignment:
Q  390 aaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||||||||||||| | ||||| |||||||||| ||| |||||||||    
T  6541317 aaaattttaaaataatccatgattgtgcactttgtaagtcaaaatagtc 6541269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 349 - 441
Target Start/End: Complemental strand, 7152149 - 7152057
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctt 441  Q
    ||||| ||||| || |||| ||||||||||||  |||||| ||||||| |||||||||  ||||| | ||||| |||| | |||||| |||||    
T  7152149 tgaatgtgtaacgagtaattacaataatctcttgatgtatcaaaatttcaaaataatttatgattatacacttggttaatcaaaataatcctt 7152057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 409
Target Start/End: Original strand, 19954553 - 19954622
Alignment:
Q  336 tcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcct 409  Q
    |||||||| | | ||||| ||||| |||||||||||||||    ||||||||| |||||||||||||| |||||    
T  19954553 tcattttggtccctgaatgtgtaaagaataatcacaataa----tcaatgtatcaaaattttaaaatagttcct 19954622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 36144983 - 36145027
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||||||| |||||||||||||  | |||||||||||||||||    
T  36144983 atgacaataactaagtatattgaaaaactaatatgacaatattaa 36145027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 8e-47; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 349 - 524
Target Start/End: Original strand, 33590111 - 33590286
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    |||||||| ||  ||||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| || |||||| ||||| |||    
T  33590111 tgaatatgcaacaaataatcacaatagtctctcaatgtattaaaattgtaaaatagttcatgattttgcactttgttagtcaatatagtcttttaagtga 33590210  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||| ||| |||||||||  ||  |||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  33590211 caataattaattatattgaagaatcgatatgacaatattaacgaagtattttaatgttagggattattttgactaa 33590286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 538
Target Start/End: Original strand, 1249113 - 1249303
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaa-tg 447  Q
    ||||||||||| ||||||||| |||| ||||| ||| |||||||||| ||||||| ||| ||||||||| |||||||||| |||||||||||| ||| ||    
T  1249113 tgaatatgtaacgaataatcataatagtctcttaatctattaaaattctaaaatagttcatgattttgctctttgttagtcaaaatagtccttgaaagtg 1249212  T
Q  448 acaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    ||||||||||| |||||||||  | | |||||||| ||||||| || |||| ||||||||  ||||||||||||||| | |||||||||||    
T  1249213 acaataagtaaatatattgaagtactgatatgacagtattaacaaaatattttaatgttatagattattttgactaacgaaatgtacaatc 1249303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 349 - 526
Target Start/End: Complemental strand, 36754836 - 36754659
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    |||| ||||||| |||||||| |||||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||| | |||||||| | || |||    
T  36754836 tgaacatgtaataaataatcataataatctctcagtgtattaaaattctaaaataattcatgattttgtactttgttagtcataatagtccatgaagtga 36754737  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatg 526  Q
    |||||| ||||||||||||| || |||||||||||||| || ||||||||  |||||||  ||  |||||||||||||    
T  36754736 caataaataagtatattgaaggactaatatgacaatatcaatgaagtatttgaatgttagggaccattttgactaatg 36754659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 364 - 538
Target Start/End: Original strand, 7680862 - 7681036
Alignment:
Q  364 taatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtata 463  Q
    ||||||||||| ||||||||| ||||||||||| |||||| || ||||||||| ||||||||| | | |||||||||| ||||||||||||||||| |||    
T  7680862 taatcacaatactctctcaatatattaaaatttaaaaatagtttctgattttgtactttgttactcataatagtccttgaaatgacaataagtaaggata 7680961  T
Q  464 ttgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    |||||  | ||| ||||||||||||||||| |||| ||||||||  ||  ||||||||||| | |||| ||||||    
T  7680962 ttgaaatactaagatgacaatattaacgaattattttaatgttagggacgattttgactaacgaaatgcacaatc 7681036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 523
Target Start/End: Original strand, 4586758 - 4586941
Alignment:
Q  338 attttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    |||||||| ||||||| ||||| || || | |||||| ||||| |||||||||||||||||||||| |   ||||||||||||| |||||| ||||||||    
T  4586758 attttgatccttgaatgtgtaacgagtagttacaatagtctcttaatgtattaaaattttaaaatagtctatgattttgcacttcgttagtcaaaatagt 4586857  T
Q  438 cctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgacta 523  Q
     | | || ||||||  |||||||||| | || || |||||||||||||||| | || |||| |||||||   || |||||||||||    
T  4586858 tc-tgaattgacaactagtaagtata-taaaagactaatatgacaatattagcaaattattttaatgttggggactattttgacta 4586941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 441
Target Start/End: Original strand, 3714732 - 3714838
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    ||||||||||||||| ||| |||||| |||| | |||||| ||  | ||| ||||||||||| ||||||||  ||||||||||| ||||||||| |||||    
T  3714732 gtcattttgattcttaaatgtgtaataaatagttacaatagtcctttaatatattaaaatttcaaaataatcactgattttgcattttgttagtcaaaat 3714831  T
Q  435 agtcctt 441  Q
    |||||||    
T  3714832 agtcctt 3714838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 443 - 524
Target Start/End: Original strand, 26018685 - 26018766
Alignment:
Q  443 aaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||| |||| |||||| |  || ||||||||||||    
T  26018685 aaatgacaataagtaagtatattgaatgactaatataacaatgttaacgaactattttaatgtcatagactattttgactaa 26018766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 409 - 507
Target Start/End: Original strand, 41303047 - 41303144
Alignment:
Q  409 tgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgtta 507  Q
    |||||||||||||||||||| ||||||| |||  |  ||||||||| |||||||||| || || |||||||||||||||||| || |||| ||||||||    
T  41303047 tgattttgcactttgttagtcaaaatagccctggag-tgacaataattaagtatattaaaagactaatatgacaatattaacaaattattttaatgtta 41303144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 426
Target Start/End: Complemental strand, 6394145 - 6394086
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgtta 426  Q
    ||||||||||||||||||||||||||||||||||| | ||||  ||| ||||||||||||    
T  6394145 tcacaataatctctcaatgtattaaaattttaaaacagttccaaattgtgcactttgtta 6394086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 524
Target Start/End: Complemental strand, 24018072 - 24017993
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||||| |||| |||| | ||||| || ||| |||||    
T  24018072 atgacaattagtatgtatattgaatgactaatatgacaatattaacgaaatattttaatataaatgaatacttttactaa 24017993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 448 - 526
Target Start/End: Original strand, 21602112 - 21602190
Alignment:
Q  448 acaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatg 526  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||| |||| |||||| |  || |||||||| |||||    
T  21602112 acaataagttagtatattgaaggactaatatgacaatattaacgaattattttaatgtcagggactattttgattaatg 21602190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 531
Target Start/End: Original strand, 33508620 - 33508701
Alignment:
Q  450 aataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatg 531  Q
    ||||||||||||||||||| || ||||| || |||||||| |||||||| |||||| |  ||||||||||| ||||| ||||    
T  33508620 aataagtaagtatattgaaggactaatacgataatattaatgaagtattttaatgtcagagattattttgattaatgaaatg 33508701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 487
Target Start/End: Complemental strand, 42659975 - 42659934
Alignment:
Q  446 tgacaataagtaagtatattgaatgattaatatgacaatatt 487  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  42659975 tgacaataagtaagtatattgaatgactaatatgacaatatt 42659934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 443
Target Start/End: Complemental strand, 6915615 - 6915508
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    |||| |||||||||| ||| |||||| | ||||||||||| || || ||||||| |||||||||||||||||  ||||| |||| | ||||| | |||||    
T  6915615 gtcaatttgattcttaaatgtgtaataagtaatcacaatagtc-cttaatgtatcaaaattttaaaataatttttgattgtgcattatgttaatcaaaat 6915517  T
Q  435 agtccttta 443  Q
    ||| |||||    
T  6915516 agttcttta 6915508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 7604066 - 7604022
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  7604066 atgacaataagtaaatatattgaaagattaatatgacaatattaa 7604022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 21600577 - 21600522
Alignment:
Q  443 aaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtatt 498  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||| ||| ||||    
T  21600577 aaatgacaataagtaagtatattgaaggacaaatatgacaatattaatgaaatatt 21600522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 348 - 445
Target Start/End: Complemental strand, 18080535 - 18080438
Alignment:
Q  348 ttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaa 445  Q
    |||||||||||| |  || ||| |||| ||||| ||||||| ||||||| |||||| ||  ||||| |||||| ||||| | ||||||||||||||||    
T  18080535 ttgaatatgtaaggggtagtcaaaatagtctcttaatgtatcaaaatttcaaaatattttttgattgtgcactatgttattgaaaatagtcctttaaa 18080438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 41302650 - 41302723
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcacttt 422  Q
    ||||| ||||| || ||||||||||| ||| |||| ||||||||||||||||||| |   ||||||||||||||    
T  41302650 tgaatgtgtaacgagtaatcacaatagtctttcaaagtattaaaattttaaaatagtctatgattttgcacttt 41302723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 18080380 - 18080428
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaa 493  Q
    |||| |||||||||| |||||||  ||||||||||||||||||||||||    
T  18080380 atgataataagtaagcatattgagggattaatatgacaatattaacgaa 18080428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 524
Target Start/End: Original strand, 3093884 - 3093963
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||| ||| |||||||||  | |||||||||| |||||||  |  ||| ||||||||| |||||||||||||||    
T  3093884 atgacaataaataactatattgaaaaactaatatgacagtattaacagaacattttaatgttaaagattattttgactaa 3093963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 504
Target Start/End: Complemental strand, 3662489 - 3662430
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatg 504  Q
    ||||||||||||||||||||| ||  | |||||||||||||||||| || |||| |||||    
T  3662489 atgacaataagtaagtatattaaagaactaatatgacaatattaacaaattattttaatg 3662430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 438
Target Start/End: Original strand, 7603934 - 7604001
Alignment:
Q  371 aataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||| ||| ||||||||| |||||||||||||||||  ||||| ||||||| ||| || |||||||||    
T  7603934 aatagtctttcaatgtatcaaaattttaaaataatttttgattgtgcacttcgttggtcaaaatagtc 7604001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 441
Target Start/End: Original strand, 15822831 - 15822905
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctt 441  Q
    ||||||||||| || ||| ||| ||||||||| |||| ||| ||| |||||| | ||||||| ||||||||||||    
T  15822831 tcacaataatcccttaatatatcaaaattttagaatagttcttgagtttgcaatatgttagtcaaaatagtcctt 15822905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 525
Target Start/End: Complemental strand, 6393952 - 6393875
Alignment:
Q  448 acaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaat 525  Q
    |||||| ||||||||||||||  | |||||||| |||||||| ||| |||| ||||||||   | |||||||||||||    
T  6393952 acaatatgtaagtatattgaagaactaatatgataatattaaagaactattttaatgttaggaactattttgactaat 6393875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Original strand, 16338267 - 16338312
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaac 490  Q
    |||||||||||||||||||||||  ||  |||||||||||||||||    
T  16338267 atgacaataagtaagtatattgatggacaaatatgacaatattaac 16338312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 2987052 - 2987008
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||||||||||||||||||||| || |||||||| | ||||||    
T  2987052 atgacaataagtaagtatattgaaagactaatatgatagtattaa 2987008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 21145542 - 21145494
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaa 493  Q
    |||||| ||||||||||||||||  || |||||||| ||||||||||||    
T  21145542 atgacagtaagtaagtatattgagagactaatatgataatattaacgaa 21145494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 28802466 - 28802514
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaa 493  Q
    |||||||||| ||| ||||||||| | ||||||| ||||||||||||||    
T  28802466 atgacaataaataaatatattgaaggtttaatatcacaatattaacgaa 28802514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 439
Target Start/End: Complemental strand, 41303208 - 41303148
Alignment:
Q  379 ctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcc 439  Q
    |||||||||| |||||||||||||| |   ||||| ||||||||| |||| ||||||||||    
T  41303208 ctcaatgtatcaaaattttaaaatagtcattgattatgcactttgctagtcaaaatagtcc 41303148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Complemental strand, 42844997 - 42844961
Alignment:
Q  453 aagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||| |||||||||||||| |||||||||||||||    
T  42844997 aagtaattatattgaatgattgatatgacaatattaa 42844961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 338 - 525
Target Start/End: Complemental strand, 7165844 - 7165657
Alignment:
Q  338 attttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    |||||||| | | ||| ||||| || || |||||||| ||| |||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||||    
T  7165844 attttgatccctaaatgtgtaacgagtagtcacaatagtctttcaatgtattaaaattttaaaatagtctctgattttgcactttattagttaaaatagt 7165745  T
Q  438 cctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaat 525  Q
    | || || ||||||||||||||||||||||| || |||||||| ||||||||| || |||| ||||||||| || |||||||||||||    
T  7165744 ctttgaagtgacaataagtaagtatattgaaagactaatatgaaaatattaacaaattattttaatgttaaggactattttgactaat 7165657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 349 - 538
Target Start/End: Complemental strand, 31967637 - 31967448
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    |||||||||||| |||| ||| |||||||||||| |||||||||||| ||||| ||| | |||||||| ||||||||||| | |||||||  | || |||    
T  31967637 tgaatatgtaataaatagtcataataatctctcagtgtattaaaattctaaaagaatccatgattttgtactttgttagtcataatagtctctgaagtga 31967538  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    || |||  |||||||||||| || |||||||||||||| || ||||||||  |||||||  || |||||||||||||| | |||||||||    
T  31967537 cagtaaaaaagtatattgaaggactaatatgacaatatcaatgaagtatttgaatgttagggactattttgactaatgaagtgtacaatc 31967448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 382 - 507
Target Start/End: Original strand, 17742514 - 17742638
Alignment:
Q  382 aatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaatatgac 481  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||||||||||| || | || |||||||||||||||||||| || || |||||||||    
T  17742514 aatgtattaaaattttaaaatagtctctgattttgcactttgttagttaaaatag-ccctgaagtgacaataagtaagtatattaaaagactaatatgac 17742612  T
Q  482 aatattaacgaagtattctaatgtta 507  Q
    ||||||||| || ||||  |||||||    
T  17742613 aatattaacaaattatttaaatgtta 17742638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 362 - 520
Target Start/End: Complemental strand, 41746582 - 41746424
Alignment:
Q  362 aataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagta 461  Q
    |||| ||| |||| |||||||||||||| ||||| ||||||| ||| |||||||| ||||| ||||  | |||||||| | || ||||||||| ||||||    
T  41746582 aatagtcataatagtctctcaatgtatttaaattctaaaatagttcatgattttgtacttttttagacataatagtccctgaagtgacaataaataagta 41746483  T
Q  462 tattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttga 520  Q
    ||||||| |  ||||||||||||||||| |||||||| ||||||||  || ||||||||    
T  41746482 tattgaagggctaatatgacaatattaatgaagtattttaatgttagagactattttga 41746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 445 - 537
Target Start/End: Complemental strand, 6788393 - 6788301
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaat 537  Q
    |||| |||||||||||||||||||||| || ||||||||||||||| || |||| |||||| | |||||||||||||||||| |||| |||||    
T  6788393 atgataataagtaagtatattgaatgactagtatgacaatattaacaaattattttaatgtcattgattattttgactaatgaaatgcacaat 6788301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 448 - 538
Target Start/End: Complemental strand, 40124434 - 40124344
Alignment:
Q  448 acaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    ||||||||||||||||||||| |  ||||||||||||||||| |||||| | ||||||||  || |||||||||||| ||| || ||||||    
T  40124434 acaataagtaagtatattgaagggctaatatgacaatattaatgaagtactttaatgttatggactattttgactaacggagtgcacaatc 40124344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 445 - 523
Target Start/End: Original strand, 15301520 - 15301598
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgacta 523  Q
    |||| |||||||||||||||||||  | ||||| |||||||||||||||||||| |||||| |  || |||||||||||    
T  15301520 atgataataagtaagtatattgaagtactaataagacaatattaacgaagtattttaatgtcagagactattttgacta 15301598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 506
Target Start/End: Original strand, 20966057 - 20966184
Alignment:
Q  371 aataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatg 470  Q
    |||| ||||||||| ||||||||||||||||||     |||||||||||||||||||| |||||||         ||||||  |||||||||||| || |    
T  20966057 aatagtctctcaatctattaaaattttaaaatagcctatgattttgcactttgttagtcaaaatag--------gtgacaactagtaagtatattaaaag 20966148  T
Q  471 attaatatgacaatattaacgaagtattctaatgtt 506  Q
    | |||||||||||||||||| || |||| |||||||    
T  20966149 actaatatgacaatattaacaaattattttaatgtt 20966184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 6788587 - 6788484
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    |||||||| || ||| ||| |||||  |||| ||| |||| ||  ||||||||| |||||||||||||| || |||||| |||||||||||||| | |||    
T  6788587 gtcattttcatccttaaatgtgtaacaaatagtcataatagtcattcaatgtatcaaaattttaaaatagtttctgattgtgcactttgttagtcagaat 6788488  T
Q  435 agtc 438  Q
    ||||    
T  6788487 agtc 6788484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 437
Target Start/End: Complemental strand, 13478855 - 13478769
Alignment:
Q  351 aatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    ||||||||||||||| | |||||||||| | ||| ||| |||||||||||||| ||  ||||| |||| ||| ||||| ||||||||    
T  13478855 aatatgtaatgaatagtaacaataatctttgaatatatcaaaattttaaaatagtttttgattgtgcattttattagtcaaaatagt 13478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 403
Target Start/End: Complemental strand, 14441209 - 14441139
Alignment:
Q  333 tggtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaata 403  Q
    |||||||||| || ||||||| |||||||| |||  |||||||||||||| |||||  |||||||||||||    
T  14441209 tggtcattttcatccttgaatgtgtaatgagtaaatacaataatctctcattgtatcgaaattttaaaata 14441139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 409
Target Start/End: Original strand, 14524200 - 14524273
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcct 409  Q
    ||||||||||| ||||||| ||||||||||| | |||||| ||| |||| ||| |||||||||| ||||||||||    
T  14524200 gtcattttgatccttgaatgtgtaatgaatagttacaatattctttcaacgta-taaaattttataataattcct 14524273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 13242588 - 13242535
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtatt 498  Q
    ||||||||||||||  ||||| || || ||||||||||||||||||||||||||    
T  13242588 atgacaataagtaaccatattaaaggactaatatgacaatattaacgaagtatt 13242535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 15816948 - 15816895
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtatt 498  Q
    |||| ||||||||||||| ||||| || |||||||||||||||||| |||||||    
T  15816948 atgaaaataagtaagtatcttgaaggactaatatgacaatattaacaaagtatt 15816895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 19206556 - 19206503
Alignment:
Q  382 aatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaata 435  Q
    ||||||| |||||||||||||| || |||||| |||||||||||||| ||||||    
T  19206556 aatgtatcaaaattttaaaatagtttctgattatgcactttgttagtcaaaata 19206503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 8940070 - 8940114
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||    
T  8940070 atgacaacaagtatgtatattgaatgactaatatgacaatattaa 8940114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 39002991 - 39002943
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaa 493  Q
    ||||||||||||||||||||||||||| |||||| | ||| ||||||||    
T  39002991 atgacaataagtaagtatattgaatgactaatataataattttaacgaa 39002943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 7165604 - 7165675
Alignment:
Q  371 aataatctctcaatgtattaaaattttaaaa-taattcctgattttgcactttgttagttaaaatagtcctt 441  Q
    |||| ||||| ||||||||||| |||||||| || ||| ||||| |||||||| ||||| ||||||||||||    
T  7165604 aatagtctcttaatgtattaaatttttaaaaatagttcttgattgtgcactttattagtcaaaatagtcctt 7165675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 524
Target Start/End: Complemental strand, 21603584 - 21603505
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||| ||||| |||||||  | ||| ||||||||||||||||| |||| |||| | || || ||||||||||||    
T  21603584 atgacaataactaagtctattgaagaactaacatgacaatattaacgaaatattttaatatcaaagactattttgactaa 21603505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 438
Target Start/End: Original strand, 34883935 - 34884006
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||||| || |||||||||| |||||||||||||| |  || ||| |||||| ||||||| |||||||||    
T  34883935 tcacaatagtccctcaatgtatcaaaattttaaaatagtctctaattgtgcactctgttagtcaaaatagtc 34884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 428
Target Start/End: Original strand, 42657800 - 42657846
Alignment:
Q  382 aatgtattaaaattttaaaataattcctgattttgcactttgttagt 428  Q
    ||||||||||||||||||||||||  |||||| |||||| |||||||    
T  42657800 aatgtattaaaattttaaaataatatctgattatgcactatgttagt 42657846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Original strand, 30256234 - 30256279
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaac 490  Q
    |||| ||||| |||||||||||| ||| ||||||||||||||||||    
T  30256234 atgataataaataagtatattgagtgactaatatgacaatattaac 30256279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 508
Target Start/End: Complemental strand, 43191916 - 43191851
Alignment:
Q  443 aaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaa 508  Q
    |||| ||||||||||| ||||||| | || |||||| |||||||||||||| |||| |||| ||||    
T  43191916 aaataacaataagtaaatatattggaggactaatataacaatattaacgaaatattttaatattaa 43191851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 1901664 - 1901620
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||||||| ||| |||||||||  |||||||||||||||||||    
T  1901664 atgacaataaataaatatattgaaaaattaatatgacaatattaa 1901620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 418
Target Start/End: Complemental strand, 15301684 - 15301604
Alignment:
Q  338 attttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgca 418  Q
    |||||||| ||| ||| ||||| || ||||||||||  |||||||||||||  |||||| ||||||||  |||||| ||||    
T  15301684 attttgatccttaaatgtgtaacgactaatcacaatcgtctctcaatgtatcgaaatttcaaaataatctctgattgtgca 15301604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 19206435 - 19206479
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||||||||||| ||||||||| || ||||| |||||||||||    
T  19206435 atgacaataagtaaatatattgaaggactaataagacaatattaa 19206479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 456 - 524
Target Start/End: Complemental strand, 33261073 - 33261005
Alignment:
Q  456 taagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||||||  | |||||||||||||| |||||| |||| || ||| || || ||||||||||||    
T  33261073 taagtatattgaagaaataatatgacaatatcaacgaaatattttactgtcaaagactattttgactaa 33261005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 41450445 - 41450489
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||| ||||||||| ||||||||| ||||||||||| ||||||||    
T  41450445 atgataataagtaaatatattgaaagattaatatgataatattaa 41450489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 3e-43; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 349 - 538
Target Start/End: Original strand, 6552424 - 6552613
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    |||||||||||| |||||||| |||||||||||| |||||||||||| ||||||||| | |||||||| ||||||||||| | ||||| |||| || |||    
T  6552424 tgaatatgtaataaataatcataataatctctcagtgtattaaaattctaaaataatccatgattttgtactttgttagtcataataggccttgaagtga 6552523  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    |||||| ||||||||||||| || |||| ||||||||| || ||||||||  |||||||  || |||||||||||||| | |||||||||    
T  6552524 caataaataagtatattgaaggactaatgtgacaatatcaatgaagtatttgaatgttagggactattttgactaatgaagtgtacaatc 6552613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 7617094 - 7616900
Alignment:
Q  299 acatccaacttctctatttctt--ttat---tatattattggtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaa 393  Q
    ||||||||||||||||||| ||  ||||   || |||||| ||||||||  || |||||| ||||| ||||||| | |||| ||| | ||||||||||||    
T  7617094 acatccaacttctctatttattaattataaatagattattagtcattttagtttttgaatgtgtaa-gaataattagaatagtcttttaatgtattaaaa 7616996  T
Q  394 ttttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||||||| ||  |||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  7616995 ttttaaaatagtttttgattttgcactttgttagtcaaaatagtccattaaatgacaataaataagtatattgaatgactaatatgataatattaa 7616900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 335 - 524
Target Start/End: Original strand, 26499284 - 26499473
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    ||||||||| ||| ||||| |||||  | || |||||||||||||| |||||||||||||| |||||||||   |||||||  ||||||||||| |||||    
T  26499284 gtcattttggttcctgaatgtgtaaaaagtagtcacaataatctcttaatgtattaaaattctaaaataataaatgattttatactttgttagtcaaaat 26499383  T
Q  435 agtcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    ||  | | |||||| ||| |||||||||||||||||| ||||||||||||||||| |||||||| ||||||||  || ||||||||||||    
T  26499384 agctcatgaaatgataattagtaagtatattgaatgactaatatgacaatattaatgaagtattttaatgttacggactattttgactaa 26499473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 338 - 526
Target Start/End: Original strand, 312587 - 312775
Alignment:
Q  338 attttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    |||||||| | |||||||||||| |||| ||| |||||||||||| |||||||||||| ||||||||| | |||||||| ||||| ||||| | |||| |    
T  312587 attttgatccctgaatatgtaataaatagtcataataatctctcagtgtattaaaattataaaataatacatgattttgtactttattagtcataataat 312686  T
Q  438 cctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatg 526  Q
    || | || ||||||||| ||||||||||||| || |||||||||||||| || ||||||||  |||||||  || ||||||||||||||    
T  312687 ccctgaagtgacaataaataagtatattgaaggactaatatgacaatatcaatgaagtatttgaatgttagggactattttgactaatg 312775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 349 - 524
Target Start/End: Complemental strand, 13834596 - 13834421
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    ||||| |||||||| || |||||| | ||| | |||||||||||||||||||||| |  |||||||| |||||  ||||| ||||||||  || || |||    
T  13834596 tgaatgtgtaatgagtagtcacaacagtcttttaatgtattaaaattttaaaatagtctctgattttacacttcattagtcaaaatagtttttaaagtga 13834497  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||||||||||||| || |||||||||||||||||| || |||| ||||||||| || ||||||||||||    
T  13834496 caataagtaagtatattgaaggactaatatgacaatattaacaaattattttaatgttaaagactattttgactaa 13834421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 349 - 524
Target Start/End: Original strand, 45615621 - 45615796
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    ||||| |||||| |||| |||||| | ||| |||||||||||||||||||||||| |  ||||||||||||||| ||||| ||||||||  || || |||    
T  45615621 tgaatgtgtaattaatagtcacaacagtctttcaatgtattaaaattttaaaatagtctctgattttgcactttattagtcaaaatagtttttgaagtga 45615720  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||||||||||||| || ||| |||||||||||||| || |||| |||| |||  || ||||||||||||    
T  45615721 caataagtaagtatattgaaggactaaaatgacaatattaacaaattattttaatattagagactattttgactaa 45615796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 335 - 538
Target Start/End: Original strand, 38932640 - 38932843
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    ||||||| | ||| ||||| |||||| |||| ||| |||| | | |||||||||||||||||||||||| | | |||||||| || |||||||| | |||    
T  38932640 gtcatttcggttcgtgaatgtgtaataaatagtcataatagtgtttcaatgtattaaaattttaaaatagtccatgattttgtacattgttagtcataat 38932739  T
Q  435 agtcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtac 534  Q
    ||||  | || ||||||||| ||||||||||||| || ||||||||||||||||| ||| |||| ||||||||  || ||||||||||||   |||||||    
T  38932740 agtctctgaagtgacaataaataagtatattgaaggactaatatgacaatattaatgaaatattttaatgttagagactattttgactaacaaaatgtac 38932839  T
Q  535 aatc 538  Q
    ||||    
T  38932840 aatc 38932843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 338 - 524
Target Start/End: Complemental strand, 51151119 - 51150934
Alignment:
Q  338 attttgattcttgaatatgtaatgaataatcacaataa-tctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatag 436  Q
    |||||| | ||||||| ||||| || || ||||||||| |||||||||||||||||||||||||||| |  |||||||| |||| |||| || |||||||    
T  51151119 attttggtccttgaatgtgtaacgagtagtcacaataaatctctcaatgtattaaaattttaaaatagtctctgatttt-cactctgttggtcaaaatag 51151021  T
Q  437 tcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    ||| | || |||||||||||||||||||||||  | |||||||||||||||||| || |||| ||||||||  || |||||| |||||    
T  51151020 tccct-aagtgacaataagtaagtatattgaagtactaatatgacaatattaacaaaatattttaatgttagggactattttcactaa 51150934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 371 - 524
Target Start/End: Original strand, 47097342 - 47097495
Alignment:
Q  371 aataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatg 470  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| ||||||| ||| | |  ||||  | || ||||||||| |||||||||| || |    
T  47097342 aatagtctctcaatgtattaaaattttaaaataattcatgattttgtactttgtaagtcatagcagtctctaaactgacaataaataagtatattaaagg 47097441  T
Q  471 attaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    | |||||||||||||||||  ||||||| || |||||| || ||||||||||||    
T  47097442 actaatatgacaatattaataaagtattttagtgttaaagactattttgactaa 47097495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 367 - 507
Target Start/End: Complemental strand, 56095270 - 56095131
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattg 466  Q
    |||||||| | ||||| |||||||||||||||||||  |  ||||||||||||||||||||| ||||||| | || || ||||||||||||||||||||     
T  56095270 tcacaatagtatctcattgtattaaaattttaaaattgtctctgattttgcactttgttagtcaaaataggc-ttgaagtgacaataagtaagtatatta 56095172  T
Q  467 aatgattaatatgacaatattaacgaagtattctaatgtta 507  Q
    || || |||||||||||||||||| || |||| ||||||||    
T  56095171 aaagactaatatgacaatattaacaaattattttaatgtta 56095131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 380 - 498
Target Start/End: Original strand, 48827959 - 48828077
Alignment:
Q  380 tcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaatatg 479  Q
    |||||||||| ||||||||||||| | |||||||||| ||||| |||||   |||||||| | || ||||||||||||||||||||||| | ||||||||    
T  48827959 tcaatgtatttaaattttaaaatagtccctgattttgtactttattagtcgtaatagtccctgaagtgacaataagtaagtatattgaagggttaatatg 48828058  T
Q  480 acaatattaacgaagtatt 498  Q
    |||||||||| || |||||    
T  48828059 acaatattaatgacgtatt 48828077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 520
Target Start/End: Original strand, 8755828 - 8755972
Alignment:
Q  371 aataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatg 470  Q
    |||| ||||||||| ||||||| |||||||||| ||  |||||||||| ||||||||| ||||||||  || |||||| ||||||||    |||| || |    
T  8755828 aatagtctctcaatttattaaa-ttttaaaatagtttttgattttgcattttgttagtcaaaatagtatttgaaatgataataagta----tattaaagg 8755922  T
Q  471 attaatatgacaatattaacgaagtattctaatgttaatgattattttga 520  Q
    |||||||||||||||||||||||||||| ||||||||  || ||||||||    
T  8755923 attaatatgacaatattaacgaagtattttaatgttagagactattttga 8755972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 445 - 524
Target Start/End: Complemental strand, 11839941 - 11839862
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||||| |||||| || || ||||||||||||    
T  11839941 atgacaataagtaagtgtattgaaggactaatatgacaatattaacgaagtattttaatgtcaaggactattttgactaa 11839862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 349 - 523
Target Start/End: Original strand, 32933984 - 32934151
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    ||||| |||||||| || ||| |||| ||||||||| |||||||||||||||||      |||||||||||||| ||||| ||||||| |||| || |||    
T  32933984 tgaatgtgtaatgagtagtcataata-tctctcaatatattaaaattttaaaatt-----tgattttgcactttattagtcaaaatag-ccttgaagtga 32934076  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgacta 523  Q
    ||| ||||||||||||| || || |||| ||||||||||||| || |||| ||||||||   | |||||||||||    
T  32934077 caacaagtaagtatattaaaagactaatgtgacaatattaacaaattattttaatgttagaaactattttgacta 32934151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 351 - 480
Target Start/End: Complemental strand, 35255548 - 35255419
Alignment:
Q  351 aatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgaca 450  Q
    ||||||||| || || |||||||| |||||||||||||||||||||||||||| |  ||||||||||||||| ||||| |||||||  | | || |||||    
T  35255548 aatatgtaacgagtagtcacaatagtctctcaatgtattaaaattttaaaatagtatctgattttgcactttattagtcaaaataggtc-tgaagtgaca 35255450  T
Q  451 ataagt-aagtatattgaatgattaatatga 480  Q
    |||||| ||||||||| || || ||||||||    
T  35255449 ataagtaaagtatattaaaagactaatatga 35255419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 367 - 523
Target Start/End: Original strand, 40407493 - 40407649
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaa-taattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatatt 465  Q
    |||| ||||| ||| |||| ||||||||||||||| || |   ||||||| |||||||||||| ||||||||| || || ||||||||||||| ||||||    
T  40407493 tcacgataatgtcttaatgaattaaaattttaaaaatagtgtttgattttacactttgttagtcaaaatagtc-ttgaagtgacaataagtaattatatt 40407591  T
Q  466 gaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgacta 523  Q
     || ||| ||||||| ||||||||| || |||| |||||||||||   ||||||||||    
T  40407592 aaaagatcaatatgataatattaacaaattattttaatgttaatggcaattttgacta 40407649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 445 - 526
Target Start/End: Original strand, 24806663 - 24806744
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatg 526  Q
    ||||||||||||||||||||||||  | || ||||||||||||||| || |||| ||||||||  || ||||||||||||||    
T  24806663 atgacaataagtaagtatattgaaaaactactatgacaatattaacaaattattttaatgttagagactattttgactaatg 24806744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 435
Target Start/End: Complemental strand, 1758555 - 1758467
Alignment:
Q  347 cttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaata 435  Q
    ||||||| | |||| | ||||||||||| |||||||||||||||||||||||| ||| || |||||||| || ||| ||||| ||||||    
T  1758555 cttgaatgtttaataagtaatcacaatagtctctcaatgtattaaaattttaagatagtttctgatttttcattttattagtcaaaata 1758467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 538
Target Start/End: Original strand, 6552897 - 6553013
Alignment:
Q  422 tgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgac 521  Q
    ||||||| | ||||| |||| || ||||||||| ||||||||||||| || ||||  |||||||| || ||||||||  |||||||  || |||||||||    
T  6552897 tgttagtcataataggccttgaagtgacaataaataagtatattgaaggactaatgagacaatatcaatgaagtatttgaatgttagagactattttgac 6552996  T
Q  522 taatggaatgtacaatc 538  Q
    ||||| | |||||||||    
T  6552997 taatgaagtgtacaatc 6553013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 524
Target Start/End: Original strand, 8170894 - 8170973
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    ||||||||||||||||||||||||  | ||||||||||||||||| |||  ||| |||| |||  |||||||||||||||    
T  8170894 atgacaataagtaagtatattgaagtactaatatgacaatattaatgaaacattttaatattagagattattttgactaa 8170973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 524
Target Start/End: Complemental strand, 9297524 - 9297445
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||| ||||| |||||||||| ||||| |||||||||||||||||| ||||||| |||||| ||| |  |||||||||||    
T  9297524 atgataataaataagtatatttaatgactaatatgacaatattaacaaagtattttaatgtcaataacaattttgactaa 9297445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 520
Target Start/End: Original strand, 17381483 - 17381558
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttga 520  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||| |||| |||| | || || ||||||||    
T  17381483 atgataataagtaagtatattgaaggactaatatgacaatattaacgaaatattttaatatcaaggactattttga 17381558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 442
Target Start/End: Original strand, 46216966 - 46217052
Alignment:
Q  355 tgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtccttt 442  Q
    ||||| ||||| | |||||| ||||||||||||| |||||||||||||| ||| ||||| ||||||||| || || ||||||||||||    
T  46216966 tgtaaggaatagtaacaatagtctctcaatgtatcaaaattttaaaatagttcatgattgtgcactttggta-ttcaaatagtccttt 46217052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 524
Target Start/End: Complemental strand, 55132440 - 55132361
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||| ||| || ||| || |||||||||| |||||||||||||||||| |||||| |||||  |||||||||||    
T  55132440 atgacaataaataattacattaaaggattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaa 55132361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 489
Target Start/End: Original strand, 51234394 - 51234440
Alignment:
Q  443 aaatgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||    
T  51234394 aaatgacaataagtaagtatattgaaagtttaatatgacaatattaa 51234440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 448 - 489
Target Start/End: Complemental strand, 972013 - 971972
Alignment:
Q  448 acaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  972013 acaataagtatgtatattgaatgattaatatgacaatattaa 971972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 48973336 - 48973385
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaag 494  Q
    |||||||||||||||||||||||| || ||||||||||||||||| ||||    
T  48973336 atgacaataagtaagtatattgaaggactaatatgacaatattaatgaag 48973385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 437
Target Start/End: Original strand, 32123783 - 32123882
Alignment:
Q  337 cattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatag 436  Q
    ||||||||| ||| ||| | |||||| ||| ||||||  ||| |||||||||||||||||||||||| |   |||||||| |||| ||||||||||||||    
T  32123783 cattttgatccttaaatgtttaatgagtaaccacaatcgtct-tcaatgtattaaaattttaaaatagtctttgattttgtacttcgttagttaaaatag 32123881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 439
Target Start/End: Original strand, 51150890 - 51150949
Alignment:
Q  380 tcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcc 439  Q
    ||||||||| |||||||||||||| ||| ||||| |||| ||||||||| ||||||||||    
T  51150890 tcaatgtatcaaaattttaaaatagttcgtgattgtgcattttgttagtgaaaatagtcc 51150949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 441
Target Start/End: Complemental strand, 17381619 - 17381545
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctt 441  Q
    |||||||| || |||||||||| ||||||  |||||| | ||||||| |||||||||||| | ||||||||||||    
T  17381619 tcacaatagtccctcaatgtatcaaaattccaaaatagtccctgattgtgcactttgttaatcaaaatagtcctt 17381545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 490
Target Start/End: Original strand, 36409656 - 36409698
Alignment:
Q  448 acaataagtaagtatattgaatgattaatatgacaatattaac 490  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  36409656 acaataagtaagtatattgaaggactaatatgacaatattaac 36409698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 490
Target Start/End: Original strand, 36423822 - 36423864
Alignment:
Q  448 acaataagtaagtatattgaatgattaatatgacaatattaac 490  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  36423822 acaataagtaagtatattgaaggactaatatgacaatattaac 36423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 524
Target Start/End: Original strand, 38080870 - 38080948
Alignment:
Q  446 tgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    ||||||||| |||||||||||||  | ||||||||| |||||||| ||||||| ||||||||   | ||||||||||||    
T  38080870 tgacaataaataagtatattgaagtactaatatgactatattaacaaagtattttaatgttacaaactattttgactaa 38080948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 46804773 - 46804863
Alignment:
Q  348 ttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||||||||| ||  | | |||||| || |||||||||| |||||||||||||| |  |||||| | |||||||||||| |||||||||    
T  46804773 ttgaatatgtaacgagcagtgacaatagtccctcaatgtatcaaaattttaaaatagtctctgattgtacactttgttagtcaaaatagtc 46804863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 492 - 537
Target Start/End: Complemental strand, 7616872 - 7616827
Alignment:
Q  492 aagtattctaatgttaatgattattttgactaatggaatgtacaat 537  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  7616872 aagtattctaatgttaaggattattttgactaacgaaatgtacaat 7616827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 438
Target Start/End: Original strand, 13834346 - 13834435
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    ||||| ||||| || ||| || |||| || |||||| ||| |||||||||||||| | | ||||| |||||||||||||| |||||||||    
T  13834346 tgaatgtgtaaggagtaaccataatagtccctcaatttatcaaaattttaaaatagtccttgattgtgcactttgttagtcaaaatagtc 13834435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 29223277 - 29223236
Alignment:
Q  457 aagtatattgaatgattaatatgacaatattaacgaagtatt 498  Q
    ||||||||||||||| |||||||||||||||||||| |||||    
T  29223277 aagtatattgaatgactaatatgacaatattaacgaggtatt 29223236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 972188 - 972104
Alignment:
Q  355 tgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcc 439  Q
    |||||||| || ||| |||| | | |||| ||||||||||| ||||||| ||| ||||| |||||| | ||||||||||||||||    
T  972188 tgtaatgattagtcataatagtatttcaacgtattaaaattctaaaatagttcttgattatgcactctcttagttaaaatagtcc 972104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 439
Target Start/End: Complemental strand, 11840091 - 11840031
Alignment:
Q  379 ctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcc 439  Q
    |||||||||| ||||||| |||||| | ||||||| |||||||||||| | ||||||||||    
T  11840091 ctcaatgtatcaaaatttcaaaatagtccctgattgtgcactttgttaatcaaaatagtcc 11840031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 33860338 - 33860290
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaa 493  Q
    |||||||||||| ||||||||||| || |||||| ||||||||||||||    
T  33860338 atgacaataagttagtatattgaaagactaatatcacaatattaacgaa 33860290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 493
Target Start/End: Original strand, 924751 - 924794
Alignment:
Q  450 aataagtaagtatattgaatgattaatatgacaatattaacgaa 493  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||    
T  924751 aataagtaaatatattgaattattaatatgacaatattagcgaa 924794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 524
Target Start/End: Complemental strand, 1758440 - 1758393
Alignment:
Q  477 atgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||||||||||||||| |||||| || || ||||||||||||    
T  1758440 atgacaatattaacgaagtattttaatgtcaaggactattttgactaa 1758393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 12922534 - 12922431
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    ||||||||  || |||||| |||||||| ||  ||| ||||||| | ||||||| |||||||||||||| ||| | |||||||| || ||||||  ||||    
T  12922534 gtcattttagtttttgaatttgtaatgagtagccacgataatcttttaatgtatcaaaattttaaaatagttcattattttgcatttcgttagtcgaaat 12922435  T
Q  435 agtc 438  Q
    ||||    
T  12922434 agtc 12922431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 525
Target Start/End: Original strand, 14945562 - 14945617
Alignment:
Q  470 gattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaat 525  Q
    ||||||||||||||||||||| ||  ||| |||||| ||||| |||||||||||||    
T  14945562 gattaatatgacaatattaactaatcattttaatgtaaatgactattttgactaat 14945617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 403
Target Start/End: Complemental strand, 27395737 - 27395682
Alignment:
Q  348 ttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaata 403  Q
    |||||| |||||||| |||||| ||||||| || ||| ||||||||||||||||||    
T  27395737 ttgaatgtgtaatgagtaatcataataatcactaaatatattaaaattttaaaata 27395682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 31903426 - 31903371
Alignment:
Q  443 aaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtatt 498  Q
    |||||||||||||||||||||||||| || | ||||||||||| ||| ||| ||||    
T  31903426 aaatgacaataagtaagtatattgaaggactgatatgacaatactaatgaattatt 31903371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 40317865 - 40317762
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    ||||||||||| | ||||| ||||||||||  |||||||| |   ||||||||| ||| |||||||||| | | ||||| | |||||||||| | |||||    
T  40317865 gtcattttgatccatgaatgtgtaatgaattgtcacaatagttcatcaatgtataaaatttttaaaatagtccttgattgtacactttgttaatcaaaat 40317766  T
Q  435 agtc 438  Q
    ||||    
T  40317765 agtc 40317762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 40327939 - 40327836
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    ||||||||||| | ||||| ||||||||||  |||||||| |   ||||||||| ||| |||||||||| | | ||||| | |||||||||| | |||||    
T  40327939 gtcattttgatccatgaatgtgtaatgaattgtcacaatagttcatcaatgtataaaatttttaaaatagtccttgattgtacactttgttaatcaaaat 40327840  T
Q  435 agtc 438  Q
    ||||    
T  40327839 agtc 40327836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 42375334 - 42375231
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    |||||||||||| |||||| |||||||| ||  |||||||||   | |||||||  |||||| ||| || ||  ||||| ||||||| ||||||||||||    
T  42375334 gtcattttgattattgaatgtgtaatgagtagccacaataattctttaatgtatcgaaatttcaaagtagtttttgattctgcacttcgttagttaaaat 42375235  T
Q  435 agtc 438  Q
    ||||    
T  42375234 agtc 42375231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 523
Target Start/End: Original strand, 51003588 - 51003662
Alignment:
Q  448 acaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgacta 523  Q
    ||||||||||||||||||||  |||||||||| |||||||||| || |||| ||| | ||| ||||||||| ||||    
T  51003588 acaataagtaagtatattgagagattaatatgccaatattaaccaaatattttaacg-taaggattatttttacta 51003662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 489
Target Start/End: Complemental strand, 9057421 - 9057383
Alignment:
Q  451 ataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  9057421 ataagtaagtatattgaataactaatatgacaatattaa 9057383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 438
Target Start/End: Original strand, 24806521 - 24806579
Alignment:
Q  380 tcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||||||||||||||||||||| |  |||||| ||   |||||||||||||||||||    
T  24806521 tcaatgtattaaaattttaaaatagtatctgattgtgtgttttgttagttaaaatagtc 24806579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 401
Target Start/End: Complemental strand, 30623794 - 30623744
Alignment:
Q  351 aatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaa 401  Q
    |||||| ||||| ||||||||||||||| | ||||||| ||||||||||||    
T  30623794 aatatgcaatgagtaatcacaataatcttttaatgtatcaaaattttaaaa 30623744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 437
Target Start/End: Complemental strand, 32934197 - 32934139
Alignment:
Q  379 ctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    |||||||||| |||||||||||||| ||  ||||| ||||||||| |||| ||||||||    
T  32934197 ctcaatgtatcaaaattttaaaatagtttttgattgtgcactttgctagtcaaaatagt 32934139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 523
Target Start/End: Complemental strand, 7912646 - 7912573
Alignment:
Q  450 aataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgacta 523  Q
    |||||||||||||||||||||||| || || ||||||||| |||| ||| |||| | |  || |||||||||||    
T  7912646 aataagtaagtatattgaatgattgatgtgtcaatattaatgaagcattttaatatgagggactattttgacta 7912573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 405
Target Start/End: Complemental strand, 20217521 - 20217484
Alignment:
Q  368 cacaataatctctcaatgtattaaaattttaaaataat 405  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  20217521 cacaatagtctctcaatgtatcaaaattttaaaataat 20217484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 526
Target Start/End: Original strand, 29116318 - 29116399
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatg 526  Q
    |||||||||| ||| |||||||||||| | |||||  ||||||||||||| ||| |||||| |   ||||||||||| ||||    
T  29116318 atgacaataaataaatatattgaatgacttatatgttaatattaacgaagcattttaatgtcacaaattattttgaccaatg 29116399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 355 - 435
Target Start/End: Complemental strand, 8171042 - 8170962
Alignment:
Q  355 tgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaata 435  Q
    |||||||| || ||| |||| || |||||||||| ||||||| |||||| |  ||||||||||| || |||||| ||||||    
T  8171042 tgtaatgagtagtcataatagtccctcaatgtataaaaatttcaaaatagtctctgattttgcaattcgttagtcaaaata 8170962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 33360987 - 33360943
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||||||||||||||  || ||||| |||||||||||||||||    
T  33360987 atgacaataagtaagtacgttaaatgactaatatgacaatattaa 33360943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 41679263 - 41679200
Alignment:
Q  342 tgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataatt 406  Q
    ||||||||||||||||||  | || |||||||||| | ||||| ||| |||||||||||||||||    
T  41679263 tgattcttgaatatgtaactagtagtcacaataattt-tcaatatatcaaaattttaaaataatt 41679200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 349 - 538
Target Start/End: Complemental strand, 2636 - 2447
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    |||||||||||| |||| ||| |||||||||||| |||||||||||| ||||||||| | |||||||| ||||||||||| | |||| ||| | || |||    
T  2636 tgaatatgtaataaatattcataataatctctcagtgtattaaaattctaaaataatccatgattttgtactttgttagtcataataatccctgaagtga 2537  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    |||||| ||||||||||||| || |||||||||||||| || ||||||||  |||||||  || |||||||||||||| | |||||||||    
T  2536 caataaataagtatattgaaggactaatatgacaatatcaatgaagtatttgaatgttagggactattttgactaatgaagtgtacaatc 2447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 349 - 536
Target Start/End: Original strand, 34928 - 35115
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    |||||||||||| |||| ||| |||||||||||| |||||||||||| ||||||||| | |||||||| ||||||||||| | |||||||| | || |||    
T  34928 tgaatatgtaataaatagtcataataatctctcagtgtattaaaattctaaaataatccatgattttgtactttgttagtcataatagtccctgaagtga 35027  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaa 536  Q
     ||||| ||||||||||||| || |||||||||||||| || ||||||||  |||||||  || |||||||||||||| | |||||||    
T  35028 taataaataagtatattgaaggactaatatgacaatatcaatgaagtatttgaatgttagggactattttgactaatgaagtgtacaa 35115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 349 - 538
Target Start/End: Complemental strand, 20253 - 20064
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    |||||||||||| |||| ||| |||| | ||||| |||||||||||| ||||||||| | |||||||| ||||||||||| | |||||||| | || |||    
T  20253 tgaatatgtaataaatagtcataatattatctcagtgtattaaaattctaaaataatccatgattttgtactttgttagtcataatagtccctgaagtga 20154  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    |||||| ||||||||||||| || |||||||||||||| || ||||||||  |||||||  || |||||||||||||| | |||||||||    
T  20153 caataaataagtatattgaaggactaatatgacaatatcaatgaagtatttgaatgttagagactattttgactaatgaagtgtacaatc 20064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 3e-34; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 368 - 533
Target Start/End: Original strand, 26293407 - 26293572
Alignment:
Q  368 cacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaa-tgacaataagtaagtatattg 466  Q
    ||||||||||| | ||| |||||||||| ||||||| | | |||||||| ||||||||||| ||||||| | |||||| |||||||||||| ||||||||    
T  26293407 cacaataatcttttaatatattaaaattctaaaatagtccatgattttgtactttgttagtcaaaatag-catttaaagtgacaataagtatgtatattg 26293505  T
Q  467 aatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgta 533  Q
    ||||| |||||||| ||||||||| ||||||| ||||||||| || ||||||||||||  |||||||    
T  26293506 aatgactaatatgataatattaacaaagtattttaatgttaaggactattttgactaacagaatgta 26293572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 367 - 541
Target Start/End: Original strand, 17848683 - 17848857
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattg 466  Q
    |||| ||| ||||| ||||||||||||||||||| || ||  | |||||||| ||| ||||| ||||||||||   |  |||||||||||||||||||      
T  17848683 tcacgatagtctctaaatgtattaaaattttaaattagtttttaattttgcattttattagtgaaaatagtcccagatgtgacaataagtaagtatatca 17848782  T
Q  467 aatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatctga 541  Q
    ||||| ||||||| |||||||||||||||||| ||||||||| || |||||||||||| | |||| |||||||||    
T  17848783 aatgactaatatgtcaatattaacgaagtattttaatgttaaagactattttgactaacgaaatgcacaatctga 17848857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 349 - 538
Target Start/End: Original strand, 21237176 - 21237365
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    ||||| |||||| | || ||| |||| |||||||||||||||||||| ||||||| | ||||| |||| ||||| ||||| | |||||||| |  | |||    
T  21237176 tgaatgtgtaataagtagtcataatagtctctcaatgtattaaaattctaaaatagtccctgagtttgtactttattagtcataatagtccctggagtga 21237275  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    |||||| ||||||||||||| |  |||||||||||| |||| |||||||| ||||||||   |||| ||||||||| | ||| |||||||    
T  21237276 caataactaagtatattgaacggctaatatgacaatgttaatgaagtattttaatgttaggaattaatttgactaacgaaatatacaatc 21237365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 371 - 524
Target Start/End: Original strand, 25084944 - 25085097
Alignment:
Q  371 aataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatg 470  Q
    |||| ||||| |||||||||||||||| ||||| |   | |||||||| ||| ||| | |||||| || || || ||| ||||||||||||||||||| |    
T  25084944 aatagtctcttaatgtattaaaatttttaaatagtctttaattttgcattttattaatcaaaataatctttgaagtgaaaataagtaagtatattgaaag 25085043  T
Q  471 attaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    | |||||||||||||||||| || |||| ||||||||| || ||||||||||||    
T  25085044 aataatatgacaatattaacaaattattttaatgttaaagactattttgactaa 25085097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 349 - 521
Target Start/End: Original strand, 6524863 - 6525029
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    ||||| |||||| | || ||| |||| |||||||||||||||||||| ||||||| | |||||||||| |||||||| ||||     ||| |  || |||    
T  6524863 tgaatgtgtaataagtagtcataatagtctctcaatgtattaaaattctaaaatagtccctgattttgtactttgtttgtta-----gtcata-aagtga 6524956  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgac 521  Q
     ||||||||| ||||||||| || ||||||||||||||||| |||||||| ||||||||  || |||||||||    
T  6524957 gaataagtaaatatattgaaggactaatatgacaatattaatgaagtattttaatgttacggactattttgac 6525029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 450 - 505
Target Start/End: Original strand, 10067659 - 10067714
Alignment:
Q  450 aataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgt 505  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||    
T  10067659 aataagtaagtatattgaatgactaatatgacaatattaacaaagtattttaatgt 10067714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 445 - 520
Target Start/End: Original strand, 16431590 - 16431665
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttga 520  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  ||| |||| ||||||||  || ||||||||    
T  16431590 atgacaataagtaagtatattgaatgactaatatgacaatattagtgaattattttaatgttagagactattttga 16431665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 456 - 525
Target Start/End: Original strand, 21021037 - 21021106
Alignment:
Q  456 taagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaat 525  Q
    ||||||||||||| || |||||||| |||| ||||||| |||| |||||||||||| |||||||||||||    
T  21021037 taagtatattgaaggactaatatgataataataacgaaatattttaatgttaatgactattttgactaat 21021106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 440
Target Start/End: Original strand, 10067491 - 10067564
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcct 440  Q
    |||||| |||| |||||||||| |||||| ||||||| | ||||||| |||| |||||||| ||||||||||||    
T  10067491 tcacaacaatccctcaatgtatcaaaattctaaaatagtccctgattgtgcagtttgttaggtaaaatagtcct 10067564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 490
Target Start/End: Complemental strand, 24285148 - 24285103
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaac 490  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  24285148 atgataataagtaagtatattaaatgattaatatgacaatattaac 24285103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 505
Target Start/End: Original strand, 9307395 - 9307457
Alignment:
Q  443 aaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgt 505  Q
    |||||| ||||||||||||||||||| || |||||||||||| |||| ||| |||| ||||||    
T  9307395 aaatgaaaataagtaagtatattgaaggactaatatgacaatgttaatgaattattttaatgt 9307457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 439
Target Start/End: Complemental strand, 19264810 - 19264719
Alignment:
Q  347 cttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcc 439  Q
    ||||||| ||||| || || |||||||| ||||| |||||||  ||||||||||||| |  |||||| |||||| ||||||| ||||||||||    
T  19264810 cttgaatgtgtaacgagtagtcacaatagtctct-aatgtatcgaaattttaaaatagtctctgattatgcactatgttagtcaaaatagtcc 19264719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 438
Target Start/End: Complemental strand, 25085139 - 25085083
Alignment:
Q  382 aatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    ||||||| |||||||||||||| ||  ||||| |||||||||||||| |||||||||    
T  25085139 aatgtatcaaaattttaaaatactttttgattgtgcactttgttagtcaaaatagtc 25085083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 438
Target Start/End: Original strand, 10219598 - 10219645
Alignment:
Q  391 aaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||| |||||| ||||||||| |||||||||||||| |||||||||    
T  10219598 aaatttcaaaatagttcctgattgtgcactttgttagtcaaaatagtc 10219645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 438
Target Start/End: Complemental strand, 17848885 - 17848826
Alignment:
Q  379 ctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||||||| ||||||||||||||||| | |||| |||| || |||||| |||||||||    
T  17848885 ctcaatgtatcaaaattttaaaataatttcagattgtgcatttcgttagtcaaaatagtc 17848826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 524
Target Start/End: Original strand, 28995472 - 28995547
Alignment:
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||||||| || || || ||| |||| ||||||||||||||||| ||||||||   | ||||||||||||    
T  28995472 caataagtaagtatgtttaaagactaacatgaaaatattaacgaagtattttaatgttagaaactattttgactaa 28995547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 523
Target Start/End: Original strand, 20565733 - 20565783
Alignment:
Q  473 taatatgacaatattaacgaagtattctaatgttaatgattattttgacta 523  Q
    |||||||| |||||||||||| |||| ||||||||  ||||||||||||||    
T  20565733 taatatgaaaatattaacgaaatattttaatgttatggattattttgacta 20565783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 437
Target Start/End: Original strand, 22260412 - 22260470
Alignment:
Q  379 ctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    |||||||||| |||||||||||||| |   ||||| ||||||||| |||||||||||||    
T  22260412 ctcaatgtatcaaaattttaaaatagtcattgattgtgcactttgctagttaaaatagt 22260470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 503
Target Start/End: Complemental strand, 31142089 - 31142031
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaat 503  Q
    |||||||||||||| |||||||||  | | ||||||||||||||| |||||||| ||||    
T  31142089 atgacaataagtaaatatattgaagtactgatatgacaatattaatgaagtattttaat 31142031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 7514930 - 7514983
Alignment:
Q  333 tggtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgt 386  Q
    ||||||||||| ||||||||||||||| || ||||  ||||||||| |||||||    
T  7514930 tggtcattttgtttcttgaatatgtaaagagtaatagcaataatctatcaatgt 7514983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 436
Target Start/End: Complemental strand, 12291688 - 12291631
Alignment:
Q  379 ctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatag 436  Q
    ||||||||||||||||||||||||| |   ||||| | |||||||||| |||||||||    
T  12291688 ctcaatgtattaaaattttaaaatagtctttgattgtacactttgttaattaaaatag 12291631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 28747971 - 28748015
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    ||||| ||||| ||||||||||||||| |||||||||||| ||||    
T  28747971 atgactataagcaagtatattgaatgactaatatgacaatgttaa 28748015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 505
Target Start/End: Original strand, 31315216 - 31315276
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgt 505  Q
    |||| ||||| |||||||||||||  |||||||||||||||| || ||| |||| ||||||    
T  31315216 atgataataaataagtatattgaaatattaatatgacaatatgaaagaaatattttaatgt 31315276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 450 - 490
Target Start/End: Original strand, 33806854 - 33806894
Alignment:
Q  450 aataagtaagtatattgaatgattaatatgacaatattaac 490  Q
    ||||| ||||||||||||| || ||||||||||||||||||    
T  33806854 aataattaagtatattgaaagactaatatgacaatattaac 33806894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 34806657 - 34806713
Alignment:
Q  379 ctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaata 435  Q
    |||||| ||| ||||||||||||||    |||||| |||||||||||||||||||||    
T  34806657 ctcaatttatcaaaattttaaaatagactctgattatgcactttgttagttaaaata 34806713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 1e-33; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 349 - 538
Target Start/End: Original strand, 9023255 - 9023444
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    |||||||||| | |||| ||| ||||||||| || ||||||| | || ||||||||| | |||||||| ||||||||||||| |||||||| | || |||    
T  9023255 tgaatatgtattaaatagtcataataatctcacagtgtattacacttctaaaataatccatgattttgtactttgttagttataatagtccctgaagtga 9023354  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    |||||| ||||||||||||| || |||||||||||||| || ||||||||  |||||||  || |||||||||||||  | |||||||||    
T  9023355 caataaataagtatattgaaggactaatatgacaatatcaatgaagtatttgaatgttagggactattttgactaataaagtgtacaatc 9023444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 355 - 524
Target Start/End: Complemental strand, 27770033 - 27769864
Alignment:
Q  355 tgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataa 454  Q
    |||||| |||| ||| |||| ||| |||||||||||||||| ||||||| | | |||||||| ||||| ||||| | ||||||| || || ||| |||||    
T  27770033 tgtaataaatagtcataatagtctttcaatgtattaaaattctaaaatagtccatgattttgtacttttttagtcataatagtctttgaagtgaaaataa 27769934  T
Q  455 gtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    ||||||||||||||   ||||||||||||||||||  || |||| |||||||| ||| ||| ||||||||    
T  27769933 gtaagtatattgaagagttaatatgacaatattaataaaatattttaatgttagtgactatcttgactaa 27769864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 377 - 507
Target Start/End: Original strand, 11497891 - 11498021
Alignment:
Q  377 ctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaat 476  Q
    |||||||||||||||| | || |||||||  || ||||||||| ||||||||  ||| |  || | || |||||||||||||||||||| || |||||||    
T  11497891 ctctcaatgtattaaattctttaaataatctctaattttgcacattgttagtcgaaacaccccctgaagtgacaataagtaagtatattaaaagattaat 11497990  T
Q  477 atgacaatattaacgaagtattctaatgtta 507  Q
    |||||||||||||| || |||| ||||||||    
T  11497991 atgacaatattaacaaattattttaatgtta 11498021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 377 - 507
Target Start/End: Original strand, 11505247 - 11505377
Alignment:
Q  377 ctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaat 476  Q
    |||||||||||||||| | || |||||||  || ||||||||| ||||||||  |||||  || | || |||||||||||||||||||| || |||||||    
T  11505247 ctctcaatgtattaaattctttaaataatctctaattttgcacattgttagtcgaaataccccctgaagtgacaataagtaagtatattaaaagattaat 11505346  T
Q  477 atgacaatattaacgaagtattctaatgtta 507  Q
    | |||||||||||| || |||| ||||||||    
T  11505347 acgacaatattaacaaattattttaatgtta 11505377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 377 - 507
Target Start/End: Original strand, 11512641 - 11512771
Alignment:
Q  377 ctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaat 476  Q
    |||||||||||||||| | || |||||||  || ||||||||| ||||||||  |||||  || | || |||||||||||||||||||| || |||||||    
T  11512641 ctctcaatgtattaaattctttaaataatctctaattttgcacattgttagtcgaaataccccctgaagtgacaataagtaagtatattaaaagattaat 11512740  T
Q  477 atgacaatattaacgaagtattctaatgtta 507  Q
    | |||||||||||| || |||| ||||||||    
T  11512741 acgacaatattaacaaattattttaatgtta 11512771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 377 - 507
Target Start/End: Original strand, 11520017 - 11520147
Alignment:
Q  377 ctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaat 476  Q
    |||||||||||||||| | || |||||||  || ||||||||| ||||||||  |||||  || | || |||||||||||||||||||| || |||||||    
T  11520017 ctctcaatgtattaaattctttaaataatctctaattttgcacattgttagtcgaaataccccctgaagtgacaataagtaagtatattaaaagattaat 11520116  T
Q  477 atgacaatattaacgaagtattctaatgtta 507  Q
    | |||||||||||| || |||| ||||||||    
T  11520117 acgacaatattaacaaattattttaatgtta 11520147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 377 - 507
Target Start/End: Original strand, 11527425 - 11527555
Alignment:
Q  377 ctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaat 476  Q
    |||||||||||||||| | || |||||||  || ||||||||| ||||||||  |||||  || | || |||||||||||||||||||| || |||||||    
T  11527425 ctctcaatgtattaaattctttaaataatctctaattttgcacattgttagtcgaaataccccctgaagtgacaataagtaagtatattaaaagattaat 11527524  T
Q  477 atgacaatattaacgaagtattctaatgtta 507  Q
    | |||||||||||| || |||| ||||||||    
T  11527525 acgacaatattaacaaattattttaatgtta 11527555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 377 - 507
Target Start/End: Original strand, 11534831 - 11534961
Alignment:
Q  377 ctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaat 476  Q
    |||||||||||||||| | || |||||||  || ||||||||| ||||||||  |||||   | | || |||||||||||||||||||| || |||||||    
T  11534831 ctctcaatgtattaaattctttaaataatctctaattttgcacattgttagtcgaaataccgcctgaagtgacaataagtaagtatattaaaagattaat 11534930  T
Q  477 atgacaatattaacgaagtattctaatgtta 507  Q
    |||||||||||||| || |||| ||||||||    
T  11534931 atgacaatattaacaaattattttaatgtta 11534961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 445 - 526
Target Start/End: Original strand, 8206226 - 8206307
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatg 526  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| ||| |||| |  ||| || || ||||||||||||||    
T  8206226 atgataataagtaagtatattgaaggattaatatgacaatattaatgaattattttgttgtcaaggactattttgactaatg 8206307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 438
Target Start/End: Original strand, 6217385 - 6217488
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    |||| ||||||| ||||||||||||  | || | |||||| || || ||||||| ||||||||||||||||  |||||| |||| |||| ||||||||||    
T  6217385 gtcaatttgatttttgaatatgtaaaaagtagttacaatagtcacttaatgtatcaaaattttaaaataatatctgattgtgcattttgatagttaaaat 6217484  T
Q  435 agtc 438  Q
    ||||    
T  6217485 agtc 6217488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 438
Target Start/End: Original strand, 37853241 - 37853308
Alignment:
Q  371 aataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    ||||||||||||||  |||||||||||||||||||   ||||| |||||||||||||| |||||||||    
T  37853241 aataatctctcaatacattaaaattttaaaataatctttgattgtgcactttgttagtcaaaatagtc 37853308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 450 - 524
Target Start/End: Complemental strand, 39194967 - 39194894
Alignment:
Q  450 aataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||  | ||| ||||||||||||    
T  39194967 aataagtaagtat-ttgaatgattaatatgacaatattaacgaaacattttaatggcagtgactattttgactaa 39194894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 17676566 - 17676639
Alignment:
Q  368 cacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctt 441  Q
    ||||||| ||||||||||||| |||||| ||||||| ||| ||||| |||||| ||||||| ||| ||||||||    
T  17676566 cacaatagtctctcaatgtatcaaaattctaaaatagttcttgattgtgcactctgttagtcaaagtagtcctt 17676639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 464
Target Start/End: Complemental strand, 28903873 - 28903780
Alignment:
Q  371 aataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatat 464  Q
    |||| ||||| |||||||||||||| ||||||| | | |||||||| ||||||||||| | |||||| | | || ||| |||||||||||||||    
T  28903873 aatagtctcttaatgtattaaaattctaaaatagtccgtgattttgtactttgttagtcataatagttcatgaagtgataataagtaagtatat 28903780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 464
Target Start/End: Complemental strand, 28940268 - 28940175
Alignment:
Q  371 aataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatat 464  Q
    |||| ||||| |||||||||||||| ||||||| | | |||||||| ||||||||||| | |||||| | | || ||| |||||||||||||||    
T  28940268 aatagtctcttaatgtattaaaattctaaaatagtccgtgattttgtactttgttagtcataatagttcatgaagtgataataagtaagtatat 28940175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 438
Target Start/End: Complemental strand, 22579573 - 22579502
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||||| ||  ||||||||| |||||||||||||||| ||||||| | |||||||||| | |||||||||    
T  22579573 tcacaatagtccatcaatgtatcaaaattttaaaataatccctgattatacactttgttaatcaaaatagtc 22579502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 524
Target Start/End: Complemental strand, 27001289 - 27001210
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||||||||||||||||  |  ||||||||||||||||| |||||||| |||  | || || ||||||||||||    
T  27001289 atgacaataagtaagtatattgacggggtaatatgacaatattaatgaagtattttaacatcaaagactattttgactaa 27001210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 426
Target Start/End: Complemental strand, 27001482 - 27001396
Alignment:
Q  340 tttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgtta 426  Q
    |||| ||||||||| |||||||| || |||||||| |||||| || ||| |||||||||||||| |  |||||| |||||| |||||    
T  27001482 tttggttcttgaatgtgtaatgagtagtcacaatagtctctcgatatatcaaaattttaaaatagtctctgattgtgcactctgtta 27001396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 403
Target Start/End: Complemental strand, 26675370 - 26675302
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaata 403  Q
    |||| |||| ||||||||| |||||||| ||||||||||||||| | ||||||| || ||| |||||||    
T  26675370 gtcactttggttcttgaatgtgtaatgactaatcacaataatcttttaatgtatcaatattctaaaata 26675302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 403
Target Start/End: Complemental strand, 26946978 - 26946910
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaata 403  Q
    |||| |||| ||||||||| |||||||| ||||||||||||||| | ||||||| || ||| |||||||    
T  26946978 gtcactttggttcttgaatgtgtaatgactaatcacaataatcttttaatgtatcaatattctaaaata 26946910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 439
Target Start/End: Complemental strand, 31949357 - 31949277
Alignment:
Q  359 atgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcc 439  Q
    |||| ||||||||||| ||||| ||| |||||||||||||| | | |  |||||| |||||| ||||||| ||||||||||    
T  31949357 atgagtaatcacaatagtctcttaatatattaaaattttaagagagtctctgattgtgcactatgttagtcaaaatagtcc 31949277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 438
Target Start/End: Complemental strand, 27554385 - 27554314
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||||| ||  ||||||||| |||||| ||||||||| | | ||| |||||| |||||||||||||||||    
T  27554385 tcacaatagtccttcaatgtatcaaaattctaaaataatccttaattgtgcactctgttagttaaaatagtc 27554314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 403
Target Start/End: Original strand, 29686453 - 29686499
Alignment:
Q  357 taatgaataatcacaataatctctcaatgtattaaaattttaaaata 403  Q
    |||||| || ||||||||||| |||||||||||||||||| ||||||    
T  29686453 taatgagtagtcacaataatccctcaatgtattaaaatttcaaaata 29686499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 439
Target Start/End: Complemental strand, 32270733 - 32270643
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcc 439  Q
    ||||||||||| || |||||| |||||| |||||||||||  |||||| ||||||||   ||||| |||  | ||||||| ||||||||||    
T  32270733 tgaatatgtaacgagtaatcataataatttctcaatgtatcgaaatttcaaaataatctatgattgtgcgatatgttagtcaaaatagtcc 32270643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Original strand, 917091 - 917136
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaac 490  Q
    ||||||| || ||| |||||||||||| ||||||||||||||||||    
T  917091 atgacaaaaaataaatatattgaatgactaatatgacaatattaac 917136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 9023150 - 9023195
Alignment:
Q  257 caggggcggatctactataggactatgtggggctttagccccacat 302  Q
    ||||||||||||||   |||| ||||||||||||||||||||||||    
T  9023150 caggggcggatctatgttagggctatgtggggctttagccccacat 9023195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 486
Target Start/End: Original strand, 14460085 - 14460126
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatat 486  Q
    |||||||||||||| ||||||||| || ||||||||||||||    
T  14460085 atgacaataagtaaatatattgaaggactaatatgacaatat 14460126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 8814181 - 8814225
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    ||||||||||||||||||||||   || |||||||||||||||||    
T  8814181 atgacaataagtaagtatattgggagactaatatgacaatattaa 8814225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 14461873 - 14461769
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    ||||||||||| | | ||||||||| || |   ||||||||||| ||| | |||| ||||||||||||| |  |||||| | ||||| |||||| |||||    
T  14461873 gtcattttgatccctaaatatgtaacgagtggccacaataatctttcagtctattcaaattttaaaatagtctctgattgtacacttcgttagtcaaaat 14461774  T
Q  435 agtcc 439  Q
    |||||    
T  14461773 agtcc 14461769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 355 - 403
Target Start/End: Complemental strand, 19342597 - 19342549
Alignment:
Q  355 tgtaatgaataatcacaataatctctcaatgtattaaaattttaaaata 403  Q
    ||||| || ||| ||||||||||| ||||| ||||||||||||||||||    
T  19342597 tgtaacgagtaaccacaataatctatcaatatattaaaattttaaaata 19342549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 509
Target Start/End: Original strand, 29502366 - 29502418
Alignment:
Q  457 aagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaat 509  Q
    ||||||||||||  | ||||| ||||||||||||||| |||| ||||||||||    
T  29502366 aagtatattgaaaaactaatacgacaatattaacgaaatattttaatgttaat 29502418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 29686625 - 29686669
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||| ||||||||| ||||||||| |||||| |||||||||||||    
T  29686625 atgataataagtaattatattgaaagattaacatgacaatattaa 29686669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 349 - 441
Target Start/End: Complemental strand, 42420615 - 42420524
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctt 441  Q
    ||||| ||||| | ||| |||||||  ||| | ||||||| |||||||||||||| ||| ||||| || |||||||||| | |||||||||||    
T  42420615 tgaatgtgtaacgtatagtcacaattgtctttaaatgtatcaaaattttaaaatagttcgtgattatgtactttgttag-tcaaatagtcctt 42420524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 7e-32; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 349 - 538
Target Start/End: Original strand, 50239776 - 50239963
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatga 448  Q
    |||||||||||| |||| ||| |||||||||||| |||||||||||| ||||||||| | || || || ||||||||||||| |||||||| | || |||    
T  50239776 tgaatatgtaataaatagtcataataatctctcagtgtattaaaattctaaaataatccatgtttatgtactttgttagttataatagtccctgaagtga 50239875  T
Q  449 caataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    |||||| ||||||||||||| || |||||||||||||| ||  |||||||  ||||||   || |||||||||||||  | |||||||||    
T  50239876 caataaataagtatattgaaggactaatatgacaatatcaattaagtatttgaatgtt--ggactattttgactaataaagtgtacaatc 50239963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 538
Target Start/End: Original strand, 7672342 - 7672541
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    ||||||||| | ||||||| |||||| |||| | | |||||||| | |||||||||||||| ||||||||||| |||||||| ||||||||||| | |||    
T  7672342 gtcattttggtccttgaatgtgtaataaatagttataataatcttttaatgtattaaaattctaaaataattcatgattttgtactttgttagtcataat 7672441  T
Q  435 agtcctttaaatgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtac 534  Q
    ||| | | || ||||||||||| ||||||||||| ||   | ||||| ||||| | |||||||| ||||||||  || ||||||||||||   |||||||    
T  7672442 agt-catgaagtgacaataagt-agtatattgaa-gagctaaatgac-atattgatgaagtattttaatgttagagactattttgactaacaaaatgtac 7672537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 43838486 - 43838589
Alignment:
Q  378 tctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaata 477  Q
    |||||||||||||||||||||||||| |   |||||||| ||||||||||| | |||||||| | || ||||||||||||||||||||||| |  |||||    
T  43838486 tctcaatgtattaaaattttaaaatagtctttgattttgtactttgttagtcataatagtccatgaagtgacaataagtaagtatattgaagggctaata 43838585  T
Q  478 tgac 481  Q
    ||||    
T  43838586 tgac 43838589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 445 - 524
Target Start/End: Original strand, 34979109 - 34979188
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||| |||| |||||| |  || ||||||||||||    
T  34979109 atgacaataagtaagtatattgaatgactaatatgataatattaacgaaatattttaatgtgagagactattttgactaa 34979188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 445 - 524
Target Start/End: Complemental strand, 46008698 - 46008619
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||| |||||||||| || |||||||||||||||||||||||| |||| ||||||||| || |||||| |||||    
T  46008698 atgacaataaataagtatattaaaagattaatatgacaatattaacgaattattttaatgttaaagactattttaactaa 46008619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 445 - 505
Target Start/End: Complemental strand, 14984579 - 14984519
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgt 505  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  14984579 atgacaataagcaagtatattgaaggattaatatgacaatattaacgaaatattttaatgt 14984519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 437
Target Start/End: Original strand, 40618890 - 40618980
Alignment:
Q  347 cttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    |||||||||||||||| || |||||||| |||   ||||||| |||||||||||||||| | ||||| |||| ||||||||| ||||||||    
T  40618890 cttgaatatgtaatgactagtcacaatagtcttcaaatgtatgaaaattttaaaataatccttgattgtgcaatttgttagtcaaaatagt 40618980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 451 - 522
Target Start/End: Original strand, 53705891 - 53705962
Alignment:
Q  451 ataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgact 522  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||||| |||||  |  |||||||||||||    
T  53705891 ataagtaagtatattgaataactaatatgacaatattaacaaagtattttaatgcgagagattattttgact 53705962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 340 - 438
Target Start/End: Complemental strand, 40619286 - 40619188
Alignment:
Q  340 tttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||| ||||||| |||||||| || ||| | ||||| |||||||||| |||||||||||||| |  |||||| |||||| ||||| | |||||||||    
T  40619286 tttgatccttgaatgtgtaatgagtagtcatattaatccctcaatgtatcaaaattttaaaatagtctctgattgtgcactatgttattcaaaatagtc 40619188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 436
Target Start/End: Original strand, 21568322 - 21568407
Alignment:
Q  351 aatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatag 436  Q
    |||||||||||| || |||||||||||||||||||||  ||||||| ||||||||  |||||| |||| ||  ||||| |||||||    
T  21568322 aatatgtaatgagtagtcacaataatctctcaatgtacaaaaatttcaaaataatcgctgattgtgcaattcattagtcaaaatag 21568407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 538
Target Start/End: Original strand, 23195655 - 23195748
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaatggaatgtacaatc 538  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||||| || | |||||| |  || |||||  ||||||| |||| ||||||    
T  23195655 atgacaataattaagtatattgaaagactaatatgacaatattaacgaaatactttaatgtcatagactatttgaactaatgaaatgcacaatc 23195748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 438
Target Start/End: Complemental strand, 23195789 - 23195720
Alignment:
Q  369 acaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||| ||| ||||||||||||||||||||||||||| |||||| |||| ||  |||||| ||||||||    
T  23195789 acaatagtctttcaatgtattaaaattttaaaataatttctgattgtgcatttcattagttcaaatagtc 23195720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 30843905 - 30843801
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    |||| |||| ||| ||||| |||||||| || |||||||| ||||| ||||||| ||||||  |||||| |  |||||| |||||||||||| | |||||    
T  30843905 gtcactttggttcctgaatgtgtaatgagtagtcacaatagtctcttaatgtatcaaaattccaaaatagtctctgattgtgcactttgttaatcaaaat 30843806  T
Q  435 agtcc 439  Q
    |||||    
T  30843805 agtcc 30843801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 492
Target Start/End: Original strand, 37326760 - 37326807
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacga 492  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  37326760 atgacactaagtaaatatattgagtgattaatatgacaatattaacga 37326807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 1324508 - 1324598
Alignment:
Q  348 ttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||| |||||||| ||||||||||||||  || |||||| |||||||||||||| |   ||||| ||||||||| |||  |||||||||    
T  1324508 ttgaatgtgtaatgagtaatcacaataatccttcgatgtatcaaaattttaaaatagtcaatgattatgcactttgataggcaaaatagtc 1324598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 30843712 - 30843663
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaag 494  Q
    |||||||||| ||||||||||||| || ||||||||||||||||| ||||    
T  30843712 atgacaataaataagtatattgaaagactaatatgacaatattaatgaag 30843663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 3941718 - 3941666
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtat 497  Q
    |||| |||||||| |||||||||| || ||||||||||||||||| |||||||    
T  3941718 atgataataagtaggtatattgaaggactaatatgacaatattaatgaagtat 3941666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 503
Target Start/End: Original strand, 14194858 - 14194914
Alignment:
Q  447 gacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaat 503  Q
    |||||||| |||||||||| ||||| | ||||||||||||||| |||||||| ||||    
T  14194858 gacaataactaagtatattaaatgactgatatgacaatattaatgaagtattttaat 14194914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 40954485 - 40954529
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    ||||||||||||||||||||||||  | |||||||||||||||||    
T  40954485 atgacaataagtaagtatattgaaacactaatatgacaatattaa 40954529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 45681467 - 45681395
Alignment:
Q  356 gtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagt 428  Q
    ||||||| ||||||||||| ||| | |||||||| ||||||||||||| | | ||||| ||||||||| ||||    
T  45681467 gtaatgagtaatcacaatagtctttaaatgtattgaaattttaaaatagtccttgattatgcactttgctagt 45681395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 34294206 - 34294103
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    ||||||||||| ||| ||| ||||| || |||  |||| ||| ||||| ||||| ||||| |||||||| |   ||||| |||||||||||||| |||||    
T  34294206 gtcattttgatccttaaatgtgtaacgagtaactacaacaatatctcagtgtatcaaaatcttaaaatagtatatgattgtgcactttgttagtcaaaat 34294107  T
Q  435 agtc 438  Q
    ||||    
T  34294106 agtc 34294103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 439
Target Start/End: Original strand, 43837102 - 43837192
Alignment:
Q  349 tgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcc 439  Q
    ||||| ||||| |||||||||||||| || || ||||||  |||||||||||| ||| | ||||| |||||  |||| || ||||||||||    
T  43837102 tgaatgtgtaacgaataatcacaatagtccctaaatgtaccaaaattttaaaacaatccatgattgtgcaccatgttggtcaaaatagtcc 43837192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 503
Target Start/End: Original strand, 47199894 - 47199952
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaat 503  Q
    |||| ||||||||| |||||||||||||| |||||| |||||||| |||| ||| ||||    
T  47199894 atgataataagtaaatatattgaatgattgatatgataatattaatgaagcattttaat 47199952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 54558395 - 54558433
Alignment:
Q  460 tatattgaatgattaatatgacaatattaacgaagtatt 498  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  54558395 tatattgaatgattaatataacaatattaacgaaatatt 54558433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 522
Target Start/End: Original strand, 1183150 - 1183227
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgact 522  Q
    |||||||||||||  |||||||||||| | ||||||||||||||  ||| |||| |||| | || || ||||||||||    
T  1183150 atgacaataagtacatatattgaatgactgatatgacaatattagtgaaatattttaatatcaaagactattttgact 1183227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 26499893 - 26499840
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtatt 498  Q
    |||| ||||| |||||||||||||||| | |||||| |||||||| ||||||||    
T  26499893 atgataataaataagtatattgaatgactgatatgaaaatattaatgaagtatt 26499840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 498
Target Start/End: Complemental strand, 34293989 - 34293960
Alignment:
Q  469 tgattaatatgacaatattaacgaagtatt 498  Q
    ||||||||||||||||||||||||||||||    
T  34293989 tgattaatatgacaatattaacgaagtatt 34293960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 486
Target Start/End: Original strand, 39336716 - 39336757
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatat 486  Q
    |||| ||||||||||||||||||| |||||||||| ||||||    
T  39336716 atgataataagtaagtatattgaaggattaatatgtcaatat 39336757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 438
Target Start/End: Complemental strand, 621917 - 621857
Alignment:
Q  378 tctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    ||||||||||| ||||||| |||||| | ||| | | |||||||||||||| |||||||||    
T  621917 tctcaatgtatcaaaatttcaaaatagtccctaactgtgcactttgttagtcaaaatagtc 621857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 354 - 438
Target Start/End: Original strand, 12832063 - 12832147
Alignment:
Q  354 atgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||||||||||||| |||||| || || ||||||| ||| |||||||||| | |||  || |||||| | ||||| |||||||||    
T  12832063 atgtaatgaataattacaatagtcccttaatgtatcaaagttttaaaatagtccctagttgtgcactctcttagtcaaaatagtc 12832147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 435
Target Start/End: Original strand, 51889762 - 51889862
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    |||||||||||   ||||| ||||| || || |||||||| ||| ||||||||| ||||||  ||||  || | ||||||||| |||||||||| |||||    
T  51889762 gtcattttgatctctgaatgtgtaaggagtagtcacaatagtctttcaatgtatcaaaattccaaaactatccttgattttgcgctttgttagtcaaaat 51889861  T
Q  435 a 435  Q
    |    
T  51889862 a 51889862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 524
Target Start/End: Complemental strand, 17327 - 17183
Alignment:
Q  378 tctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtcctttaaatgacaataagtaagtatattgaatgattaata 477  Q
    |||||||||||||||||| |||||||   |||||||||| ||  |  |||| ||||| |||| |  | ||||||||| |||||||||||||  | || ||    
T  17327 tctcaatgtattaaaattctaaaataggccctgattttgtaccat--tagtcaaaatggtccctgtagtgacaataaataagtatattgaaatactagta 17230  T
Q  478 tgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    ||||||||||||||||||||| ||||||||  || ||||||||||||    
T  17229 tgacaatattaacgaagtattttaatgttatggactattttgactaa 17183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 1750 - 1706
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaa 489  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  1750 atgacaataagtaaatatattgaaagattaatatgacaatattaa 1706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 438
Target Start/End: Original strand, 1618 - 1685
Alignment:
Q  371 aataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagtc 438  Q
    |||| ||| ||||||||| |||||||||||||||||  ||||| ||||||| ||| || |||||||||    
T  1618 aatagtctttcaatgtatcaaaattttaaaataatttttgattgtgcacttcgttggtcaaaatagtc 1685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 428
Target Start/End: Complemental strand, 329138 - 329044
Alignment:
Q  335 gtcattttgat-tcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagt 428  Q
    ||||||||||| |||||||| ||||| ||||| | | ||||||| || ||||||| |||||| ||||||| || |||||| | ||||||||||||    
T  329138 gtcattttgatctcttgaatgtgtaacgaatatttaaaataatcacttaatgtatcaaaattataaaatagtttctgattatacactttgttagt 329044  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 81300 - 81404
Alignment:
Q  335 gtcattttgattcttgaatatgtaatgaataatcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaat 434  Q
    ||||||||||| ||||||| || ||||| ||  ||||||| | ||| | |||||| |||||| |||||| ||  ||||| ||||||| |||||| |||||    
T  81300 gtcattttgatccttgaatgtgcaatgagtagccacaatagtatctgattgtattgaaatttcaaaatagtttatgattgtgcacttcgttagtcaaaat 81399  T
Q  435 agtcc 439  Q
    |||||    
T  81400 agtcc 81404  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 20707 - 20628
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaat 525  Q
    |||||||||| ||||| ||||||| || ||||||||||||||||| ||| |||| ||||   ||||| |||||||||||||    
T  20707 atgacaataa-taagtctattgaaggactaatatgacaatattaatgaaatattttaataacaatgactattttgactaat 20628  T

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Target: scaffold0086 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 493
Target Start/End: Complemental strand, 21760 - 21717
Alignment:
Q  450 aataagtaagtatattgaatgattaatatgacaatattaacgaa 493  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||    
T  21760 aataactaagtatattgaaggattaatatgaaaatattaacgaa 21717  T

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Target: scaffold0086; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 437
Target Start/End: Complemental strand, 21926 - 21856
Alignment:
Q  367 tcacaataatctctcaatgtattaaaattttaaaataattcctgattttgcactttgttagttaaaatagt 437  Q
    |||||||| ||| ||||| ||| ||||||  |||||| || |||||| |||||||||||||| ||||||||    
T  21926 tcacaatagtctttcaatatatcaaaattcaaaaatattttctgattgtgcactttgttagtaaaaatagt 21856  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 524
Target Start/End: Original strand, 349129 - 349208
Alignment:
Q  445 atgacaataagtaagtatattgaatgattaatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 524  Q
    |||||||||| ||||| |||||||  | ||| ||||||||||||||||| |||| |||| | || || ||||||||||||    
T  349129 atgacaataactaagtctattgaagaactaacatgacaatattaacgaaatattttaatatcaaagactattttgactaa 349208  T

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