View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14346_low_12 (Length: 426)
Name: NF14346_low_12
Description: NF14346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14346_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 9 - 400
Target Start/End: Original strand, 43537514 - 43537922
Alignment:
| Q |
9 |
gaagaatatcgcgggattatatgaaaatggaatggatatataacaatcatgtggagcaaaactctatataaaggccagttaagagattagagctttatgg |
108 |
Q |
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|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
43537514 |
gaagaaaatcgcgggattatatgaaaatggaatggatctataacaatcatgtggagcaaaactctatataaaggccagttaagaggttagagctttatgg |
43537613 |
T |
|
| Q |
109 |
atacaactaccaaaatacccttctagttgggtccaatatatata--------attatgttatgttgtggttttgtctactcatataattgagcacgtctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43537614 |
atacaactaccaaaatacccttctagttgggtcctatatatatatatatataattatgttatgttgtggttttgtctactcatataattgagcacgtctt |
43537713 |
T |
|
| Q |
201 |
tgtgataagtactgaacttgcgacatgaaagatgtaattacatg---------tatgataattgaccttccatcaatgcatgcttgacccagccattatt |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43537714 |
tgtgataagtactgaacttgcgacatgaaagatgtaattacatgtatatcatgtatgataattgaccttccatcaatgcatgcttgacccagccattatt |
43537813 |
T |
|
| Q |
292 |
taccgtacacgtgttaggaacttatggtgtttttcattttccatgcaattgtaagactttggacacatcgtatgtgaaatagatttttgttgtcaaataa |
391 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43537814 |
taccgtacacgtgttaggaacttatggtgtttttcattttccatgcaattgtaagactttggacacatcgtatgtgaaatagatttttgttgtcaaataa |
43537913 |
T |
|
| Q |
392 |
tcacactat |
400 |
Q |
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||||||||| |
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| T |
43537914 |
tcacactat |
43537922 |
T |
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