View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14349_high_81 (Length: 299)
Name: NF14349_high_81
Description: NF14349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14349_high_81 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 271; Significance: 1e-151; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 3 - 281
Target Start/End: Original strand, 10748329 - 10748607
Alignment:
| Q |
3 |
gatgtccaagaatattaactcaactagatttcctatttccacgggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggat |
102 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10748329 |
gatggccaagagtattaactcaactagatttcctatttccacgggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggat |
10748428 |
T |
 |
| Q |
103 |
aaactgccaatggaatttggcaaactacctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaactcta |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10748429 |
aaactgccaatggaatttggcaaactacctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaactcta |
10748528 |
T |
 |
| Q |
203 |
aatcgatagttgaattgttaccgaaatagttgtcttccaaatttagccagtaaagatcttgtaacttctctagacttgg |
281 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10748529 |
aatcgatagttgaattgttaccgaaatagttgtcttccaaatttagccagtaaagatcttgtaacttctctagacttgg |
10748607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 30 - 281
Target Start/End: Complemental strand, 10610578 - 10610327
Alignment:
| Q |
30 |
atttcctatttccacgggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggataaactgccaatggaatttggcaaacta |
129 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||| ||| || |||||| |||| | | |||| |||||||||||| |||||||| |||||||||||||| |
|
|
| T |
10610578 |
atttcctatttccatgggaatttttcctgttatcatattacctccaagatatagctgtctaagatgggtggataaattgccaatgaaatttggcaaacta |
10610479 |
T |
 |
| Q |
130 |
cctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaactctaaatcgatagttgaattgttaccgaaat |
229 |
Q |
| |
|
|||||||||||||||||| ||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10610478 |
cctccaaacttattattagatatagaaagcttttctagtttactacagtttgtcaaatattttaaaaactctaaatctatagttgaattgttaccgaaat |
10610379 |
T |
 |
| Q |
230 |
agttgtcttccaaatttagccagtaaagatcttgtaacttctctagacttgg |
281 |
Q |
| |
|
|||||| ||||||| | ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10610378 |
agttgtattccaaactcagccagtaaagatctggtaacttctctagacttgg |
10610327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 23 - 281
Target Start/End: Complemental strand, 10563902 - 10563644
Alignment:
| Q |
23 |
caactagatttcctatttccacgggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggataaactgccaatggaatttgg |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| |||||||||| | |||||| |||||||| ||||||| |
|
|
| T |
10563902 |
caactagatttcctatttccacgggaatttttcctgatatcatatttcccccaagatatagttgtgtaagttggatagataaattgccaatgaaatttgg |
10563803 |
T |
 |
| Q |
123 |
caaactacctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaactctaaatcgatagttgaattgtta |
222 |
Q |
| |
|
|||| ||||||||| |||||| | ||| |||| || ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| |
|
|
| T |
10563802 |
caaatgacctccaaaattattagaagctatcgaaagcatttctagtttactacaatttgtcaaatagtttaaaaactctaaatctataattgaattgtta |
10563703 |
T |
 |
| Q |
223 |
ccgaaatagttgtcttccaaatttagccagtaaagatcttgtaacttctctagacttgg |
281 |
Q |
| |
|
|| |||| ||||| | | ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10563702 |
cctaaattgttgtatccaaaacttagccagtaaagatcttgtaacttctctagacttgg |
10563644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 224
Target Start/End: Complemental strand, 7191876 - 7191679
Alignment:
| Q |
27 |
tagatttcctatttccacgggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggataaactgccaatggaatttggcaaa |
126 |
Q |
| |
|
||||||||||| ||| | ||||||||||||||||||| ||| | |||||| ||||| ||||||| ||||||||| | |||||||||||||||||| |
|
|
| T |
7191876 |
tagatttcctaattcttcaggaatttttcctgatatcatattacatccaagatgtagttgcctaagttgagtggataaattcccaatggaatttggcaaa |
7191777 |
T |
 |
| Q |
127 |
ctacctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaactctaaatcgatagttgaattgttacc |
224 |
Q |
| |
|
|||||||||| |||||| ||||||||| |||| |||||||||||| |||||||| | ||||||||||||||||| |||| ||||||||||| |
|
|
| T |
7191776 |
ttacctccaaaattattaaaggatatagaaaacactagtagtttactacagtttgtcaaggattttaaaaactctaaatccttagtggaattgttacc |
7191679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 19607199 - 19607321
Alignment:
| Q |
23 |
caactagatttcctatttccacgggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggataaactgccaatggaatttgg |
122 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||| | ||| || |||||| |||||| ||||||||||||||||| | |||||||||||||| |
|
|
| T |
19607199 |
caactagatttcctatttccataggaatctttcctgatatgatattacctccaagatatagttgactaagttgggtggataaattaccaatggaatttgg |
19607298 |
T |
 |
| Q |
123 |
caaactacctccaaacttattat |
145 |
Q |
| |
|
||||||||||||||| ||||||| |
|
|
| T |
19607299 |
caaactacctccaaaattattat |
19607321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 281
Target Start/End: Original strand, 10764555 - 10764724
Alignment:
| Q |
112 |
atggaatttggcaaactacctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaactctaaatcgatag |
211 |
Q |
| |
|
||||||||||||||| ||||||||| |||||| | ||| |||| | | | | |||| || |||||||||||||| ||||||||||||||||| || | |
|
|
| T |
10764555 |
atggaatttggcaaatgacctccaaaattattaacagctatggaaagcgcatgttgtttgctgcaatttgtcaaatattttaaaaactctaaatccattg |
10764654 |
T |
 |
| Q |
212 |
ttgaattgttaccgaaatagttgtcttccaaatttagccagtaaagatcttgtaacttctctagacttgg |
281 |
Q |
| |
|
| ||||||| ||| |||| ||| ||||||||||||||| || ||||| |||||| ||| |||||||||| |
|
|
| T |
10764655 |
tggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaaattccctagacttgg |
10764724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 249
Target Start/End: Original strand, 10218154 - 10218306
Alignment:
| Q |
97 |
gtggataaactgccaatggaatttggcaaactacctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaa |
196 |
Q |
| |
|
||||||||| |||| ||| |||||||||| | |||||||| || ||||| |||||||| ||||| | ||| |||||||||||||| | ||||||| |
|
|
| T |
10218154 |
gtggataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtacaatttgtcaaagattttaaaa |
10218253 |
T |
 |
| Q |
197 |
actctaaatcgatagttgaattgttaccgaaatagttgtcttccaaatttagc |
249 |
Q |
| |
|
|||| ||||| | |||||||||| ||| |||||||||| ||||||| ||||| |
|
|
| T |
10218254 |
actccaaatcctttgttgaattgtcacctaaatagttgtattccaaacttagc |
10218306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 229
Target Start/End: Original strand, 10742033 - 10742239
Alignment:
| Q |
23 |
caactagatttcctatttccacgggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggataaactgccaatggaatttgg |
122 |
Q |
| |
|
||||||||| ||||| ||| | |||||||||||||||||| |||| | || | | |||||| | |||||| | |||||| |||| ||||||||||| |
|
|
| T |
10742033 |
caactagatgtcctaattctgcaggaatttttcctgatatctgattttcccctatatatagttgtttaagttcagctgataaattgcctatggaatttgg |
10742132 |
T |
 |
| Q |
123 |
caaactacctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaactctaaatcgatagttgaattgtta |
222 |
Q |
| |
|
||| ||||||| || |||||| | ||| |||| || || || |||| |||||||||||||||| |||||||| |||||| || | |||||||||| |
|
|
| T |
10742133 |
aaaattacctccgaaattattaccagctatcgaaaacaattttaatttagtacaatttgtcaaatatcttaaaaacattaaatctatggctgaattgtta |
10742232 |
T |
 |
| Q |
223 |
ccgaaat |
229 |
Q |
| |
|
|| |||| |
|
|
| T |
10742233 |
cctaaat |
10742239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 10718255 - 10718407
Alignment:
| Q |
46 |
ggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggataaactgccaatggaatttggcaaactacctccaaacttattat |
145 |
Q |
| |
|
||||||||||||||||| |||| | |||||| |||| | ||| ||| ||||||||| | || | ||||||||| ||| |||||||||| |||||| |
|
|
| T |
10718255 |
ggaatttttcctgatatatgatttaccccaagatctagtacactaaattgagtggataaatttcccaaggaatttggaaaattacctccaaaactattat |
10718354 |
T |
 |
| Q |
146 |
tacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaac |
198 |
Q |
| |
|
|| ||||||||| || |||||||||| |||| |||| ||| | ||||||||| |
|
|
| T |
10718355 |
tatatatagaaatcaattctagtttagtacagtttgccaacgaatttaaaaac |
10718407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 281
Target Start/End: Original strand, 9837664 - 9837920
Alignment:
| Q |
25 |
actagatttcctatttccacgggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggataaactgccaatggaatttggca |
124 |
Q |
| |
|
||||||||||||| || | |||||||||||||||||| ||| || ||||| ||||||| |||||||| ||||||| |||| | ||||||||||| |
|
|
| T |
9837664 |
actagatttcctaactcttctggaatttttcctgatatctcattacccccaaggtatagttcactaagttggaaggataaattgcccacggaatttggca |
9837763 |
T |
 |
| Q |
125 |
aactacctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaactctaaatcgatagttgaattgttacc |
224 |
Q |
| |
|
| ||||||||| |||||| | || | || ||||| || |||||||||||||||| | || |||||| ||||||| |||||||||||| ||| |
|
|
| T |
9837764 |
ggcaacctccaaaattattagcagctaaactaagcacttgtaagttactacaatttgtcatagttttcaaaaaccctaaatccttagttgaattgtcacc |
9837863 |
T |
 |
| Q |
225 |
gaaatagttgtcttccaaatttagccagtaaagatcttgtaacttctctagacttgg |
281 |
Q |
| |
|
| | ||| ||| | ||||||| | | ||||||||||| |||| |||||||||| |
|
|
| T |
9837864 |
tagaatgttcatttcaagatttagcaaattaagatcttgtagcttccctagacttgg |
9837920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 10603482 - 10603370
Alignment:
| Q |
169 |
ttactacaatttgtcaaatactttaaaaactctaaatcgatagttgaattgttaccgaaatagttgtcttccaaatttagccagtaaagatcttgtaact |
268 |
Q |
| |
|
|||||||| |||||||| | ||||||||||| ||||| || ||||| |||| ||| ||| ||| ||||||||||||| | |||||||||| || || |
|
|
| T |
10603482 |
ttactacagtttgtcaatgattttaaaaactccaaatcaattgttgagttgtcacctaaaatgttcatttccaaatttagcaaataaagatcttttagct |
10603383 |
T |
 |
| Q |
269 |
tctctagacttgg |
281 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
10603382 |
tccctagacttgg |
10603370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 10653599 - 10653730
Alignment:
| Q |
89 |
taagttgggtggataaactgccaatggaatttggcaaactacctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaata |
188 |
Q |
| |
|
||||||| ||||||||| |||| | |||||||||| |||||||||| ||||||| | |||||||| ||| |||||||||||| |||||||| |
|
|
| T |
10653599 |
taagttgagtggataaattgcctacaaaatttggcaagttacctccaaaattattataagctatagaaatcacggttagtttactacagtttgtcaaggt |
10653698 |
T |
 |
| Q |
189 |
ctttaaaaactctaaatcgatagttgaattgt |
220 |
Q |
| |
|
|||||||| |||||||| |||||| ||||| |
|
|
| T |
10653699 |
ttttaaaaattctaaatccttagttgtattgt |
10653730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 10599890 - 10599841
Alignment:
| Q |
96 |
ggtggataaactgccaatggaatttggcaaactacctccaaacttattat |
145 |
Q |
| |
|
|||||||||| | ||||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
10599890 |
ggtggataaatttccaatagaattttgcaaactacctccaaaattattat |
10599841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 46 - 266
Target Start/End: Complemental strand, 12931131 - 12930911
Alignment:
| Q |
46 |
ggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggataaactgccaatggaatttggcaaactacctccaaacttattat |
145 |
Q |
| |
|
||||||||||||||||||| ||| || || | | ||||||||| ||||| || |||||| |||| ||||||||||||||| ||||||||| ||||||| |
|
|
| T |
12931131 |
ggaatttttcctgatatcatattaccccccatatatagttctggaagttcagtcgataaattgcctatggaatttggcaaatgacctccaaaattattat |
12931032 |
T |
 |
| Q |
146 |
tacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaactctaaatcgatagttgaattgttaccgaaatagttgtcttccaaatt |
245 |
Q |
| |
|
| |||| |||| ||| | ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| ||| |||||||| | |
|
|
| T |
12931031 |
aagatatcgaaagcacgtatagtttactgcaatttgtcaaatattttaaaaactctaaatccatagttgaattgttacctaaattgttaacttccaaact |
12930932 |
T |
 |
| Q |
246 |
tagccagtaaagatcttgtaa |
266 |
Q |
| |
|
||| || ||||||||||||| |
|
|
| T |
12930931 |
taggaaggaaagatcttgtaa |
12930911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 266
Target Start/End: Complemental strand, 12947496 - 12947276
Alignment:
| Q |
46 |
ggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggataaactgccaatggaatttggcaaactacctccaaacttattat |
145 |
Q |
| |
|
|||||||||||||||||| ||| || || | | |||||||| ||||| ||||||||| |||| |||||||||||||||| ||||| ||| ||||| | |
|
|
| T |
12947496 |
ggaatttttcctgatatcttattaccccccatatatagttctagaagttcagtggataaattgcctatggaatttggcaaacgacctcgaaaattatttt |
12947397 |
T |
 |
| Q |
146 |
tacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaactctaaatcgatagttgaattgttaccgaaatagttgtcttccaaatt |
245 |
Q |
| |
|
| |||| |||| || | ||||||||| |||||||||||||| |||||||||||||| || ||||||||| ||||||| |||| ||| ||||||| | |
|
|
| T |
12947396 |
aagatatcgaaagcatgtttagtttactgcaatttgtcaaatattttaaaaactctaagtccatagttgaaatgttacctaaattgttaaattccaaact |
12947297 |
T |
 |
| Q |
246 |
tagccagtaaagatcttgtaa |
266 |
Q |
| |
|
||| || ||||||||||||| |
|
|
| T |
12947296 |
taggaaggaaagatcttgtaa |
12947276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 281
Target Start/End: Complemental strand, 12906065 - 12905807
Alignment:
| Q |
23 |
caactagatttcctatttccacgggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggataaactgccaatggaatttgg |
122 |
Q |
| |
|
||||||||||||||| ||| | |||||||||||||||||| ||| || || | | ||| | | |||||| ||||| || |||| ||||||||||| |
|
|
| T |
12906065 |
caactagatttcctaattcgtcaggaatttttcctgatatctgattaccccccataaataaatatttaagttcagtggaaaagttgcctatggaatttgg |
12905966 |
T |
 |
| Q |
123 |
caaactacctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaactctaaatcgatagttgaattgtta |
222 |
Q |
| |
|
|||| |||||||| |||||| | ||| |||| ||| | ||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| |
|
|
| T |
12905965 |
caaatgtcctccaaaattattagaatctattgaaagcacgtatagtttactgcaatttgtcaaatattttaaaaactctaaatccttagttgaaatgtta |
12905866 |
T |
 |
| Q |
223 |
ccgaaatagttgtcttccaaatttagccagtaaagatcttgtaacttctctagacttgg |
281 |
Q |
| |
|
|| |||| |||| | ||||| |||| | |||||| |||||| ||| |||||||||| |
|
|
| T |
12905865 |
cctaaattgttgaatcccaaacttagaatggaaagattttgtaaattccctagacttgg |
12905807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 281
Target Start/End: Complemental strand, 12956882 - 12956698
Alignment:
| Q |
97 |
gtggataaactgccaatggaatttggcaaactacctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaa |
196 |
Q |
| |
|
||||||||| | || ||||||||||||||| |||||||| ||||||| | |||| |||| | | ||||||||| ||||| |||||||| |||| || |
|
|
| T |
12956882 |
gtggataaattccctatggaatttggcaaatggcctccaaaattattataagatatcgaaagcttgtgtagtttactgcaattagtcaaatattttagaa |
12956783 |
T |
 |
| Q |
197 |
actctaaatcgatagttgaattgttaccgaaatagttgtcttccaaatttagccagtaaagatcttgtaacttctctagacttgg |
281 |
Q |
| |
|
| |||||||| ||||||||| ||||||| |||| ||| || ||||||||| | |||| |||||||| ||| |||||||||| |
|
|
| T |
12956782 |
attctaaatccatagttgaaatgttacctaaattgtttgattgcaaatttagattggaaaggtcttgtaaattccctagacttgg |
12956698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 281
Target Start/End: Complemental strand, 12898302 - 12898185
Alignment:
| Q |
165 |
tagtttactacaatttgtcaaatactttaaaaactct-aaatcgatagttgaattgttaccgaaatagttgtcttccaaatttagccagtaaagatcttg |
263 |
Q |
| |
|
||||||||| |||||||||||||| |||||||| ||| ||||| ||||||||| ||||||| |||| |||| | ||||| |||| | |||||| ||| |
|
|
| T |
12898302 |
tagtttactgcaatttgtcaaatattttaaaaaatctaaaatccatagttgaaatgttacctaaattgttgaatcccaaacttagaatggaaagattttg |
12898203 |
T |
 |
| Q |
264 |
taacttctctagacttgg |
281 |
Q |
| |
|
||| ||| |||||||||| |
|
|
| T |
12898202 |
taaattccctagacttgg |
12898185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 46 - 281
Target Start/End: Original strand, 17924760 - 17924995
Alignment:
| Q |
46 |
ggaatttttcctgatatcaaatttccaccaagacatagttctgtaagttgggtggataaactgccaatggaatttggcaaactacctccaaacttattat |
145 |
Q |
| |
|
|||||||||||||||||| ||| || || | | |||||| | |||||| ||||||||| | || ||||||||||||||| ||||||||| ||||||| |
|
|
| T |
17924760 |
ggaatttttcctgatatctgattaccccccatatatagttgtttaagttcagtggataaattccctatggaatttggcaaatgacctccaaaattattat |
17924859 |
T |
 |
| Q |
146 |
tacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaaactctaaatcgatagttgaattgttaccgaaatagttgtcttccaaatt |
245 |
Q |
| |
|
| |||| |||| | | ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| | ||| |||| ||| ||||||||||| |
|
|
| T |
17924860 |
aagatatcgaaaacttgtgtagtttactgcaatttgtcaaatattttaaaaactctaaatccatagttgaattatcacctaaattgttttcttccaaatt |
17924959 |
T |
 |
| Q |
246 |
tagccagtaaagatcttgtaacttctctagacttgg |
281 |
Q |
| |
|
||| | |||| |||||||| ||| |||||||||| |
|
|
| T |
17924960 |
tagaatggaaaggtcttgtaaattccctagacttgg |
17924995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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