View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14349_high_90 (Length: 262)
Name: NF14349_high_90
Description: NF14349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14349_high_90 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 32214336 - 32214601
Alignment:
| Q |
1 |
aaaatcaagtttattgatgatacaaaacatgacaaaaatacattaatttggttcatacattaatttttatttcagattattgaaaaatctgtcagaaact |
100 |
Q |
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| T |
32214336 |
aaaatcaagtttattgatgatacaaaacatgacaaaaatacattaatttggttcatacattaatttttatttcagattattgaaaaatctgtcagaaact |
32214435 |
T |
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| Q |
101 |
tggt----cataatccacttgtatgatggttttgcagtgacaaattgattacggctaaacaagcttcataatcaaacacaaactacctccaatagtcagt |
196 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |
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| T |
32214436 |
tggtgtatcataatccacttgtatgatggttttgcagtgacaaattgattacggctaaacaagcatcataatcaaacacaaactacctccaacagtcagt |
32214535 |
T |
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| Q |
197 |
tagaaaaatgacaaatctcacctgaggcacgcatggaacataatcattcattaaacacactagtaa |
262 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32214536 |
tagaaaaaagacaaatctcacctgaggcacgcatggaacataatcattcattaaacacactagtaa |
32214601 |
T |
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