View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14349_low_116 (Length: 232)

Name: NF14349_low_116
Description: NF14349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14349_low_116
NF14349_low_116
[»] chr1 (49 HSPs)
chr1 (1-214)||(44685381-44685605)
chr1 (71-216)||(66480-66625)
chr1 (71-185)||(22077534-22077648)
chr1 (72-167)||(24132043-24132137)
chr1 (71-161)||(44290889-44290978)
chr1 (70-222)||(3537601-3537753)
chr1 (71-231)||(26661515-26661675)
chr1 (71-222)||(44290460-44290611)
chr1 (71-161)||(3550725-3550814)
chr1 (71-161)||(5320029-5320118)
chr1 (71-161)||(17294582-17294671)
chr1 (71-161)||(24600378-24600467)
chr1 (71-161)||(41142377-41142466)
chr1 (71-161)||(41156996-41157085)
chr1 (91-222)||(22077112-22077243)
chr1 (82-161)||(66151-66230)
chr1 (71-221)||(48588491-48588641)
chr1 (71-161)||(32594780-32594869)
chr1 (71-220)||(34364512-34364661)
chr1 (71-220)||(34364930-34365079)
chr1 (71-161)||(41184489-41184578)
chr1 (71-144)||(3537228-3537300)
chr1 (71-222)||(31767163-31767314)
chr1 (71-225)||(40082412-40082565)
chr1 (71-154)||(41157380-41157462)
chr1 (76-225)||(3875330-3875479)
chr1 (72-216)||(5575110-5575252)
chr1 (71-161)||(30630702-30630791)
chr1 (71-161)||(39066264-39066353)
chr1 (71-161)||(50052087-50052176)
chr1 (71-144)||(21378122-21378194)
chr1 (71-156)||(29798204-29798288)
chr1 (71-216)||(22793283-22793429)
chr1 (71-161)||(37556116-37556205)
chr1 (71-142)||(45084387-45084457)
chr1 (93-186)||(4956218-4956311)
chr1 (71-153)||(22077900-22077981)
chr1 (71-161)||(26661962-26662051)
chr1 (74-222)||(14318875-14319023)
chr1 (71-222)||(34649443-34649594)
chr1 (71-185)||(1188627-1188741)
chr1 (71-214)||(9955912-9956057)
chr1 (71-161)||(41759488-41759577)
chr1 (71-144)||(37850681-37850753)
chr1 (71-222)||(11977285-11977436)
chr1 (71-137)||(37555735-37555800)
chr1 (71-161)||(38804419-38804508)
chr1 (76-149)||(5528830-5528902)
chr1 (74-143)||(45839635-45839707)
[»] chr7 (44 HSPs)
chr7 (71-222)||(7517585-7517736)
chr7 (71-232)||(1085608-1085769)
chr7 (71-222)||(30244275-30244426)
chr7 (71-222)||(37533013-37533163)
chr7 (71-214)||(45434641-45434784)
chr7 (71-161)||(16569201-16569290)
chr7 (71-161)||(16596372-16596461)
chr7 (71-222)||(30245082-30245229)
chr7 (71-161)||(8128505-8128594)
chr7 (71-161)||(22566726-22566815)
chr7 (71-222)||(22567041-22567191)
chr7 (71-155)||(28301613-28301696)
chr7 (74-161)||(24177443-24177529)
chr7 (71-161)||(7554030-7554119)
chr7 (71-161)||(20599319-20599408)
chr7 (72-161)||(23441-23529)
chr7 (73-161)||(11845198-11845285)
chr7 (74-232)||(41854643-41854800)
chr7 (71-161)||(6054565-6054654)
chr7 (71-161)||(29157570-29157659)
chr7 (72-225)||(34218033-34218186)
chr7 (71-161)||(36939797-36939886)
chr7 (71-232)||(45433246-45433407)
chr7 (71-215)||(40094783-40094927)
chr7 (71-156)||(41910663-41910747)
chr7 (71-186)||(118339-118454)
chr7 (71-161)||(43241500-43241589)
chr7 (81-161)||(1085312-1085391)
chr7 (71-222)||(30032572-30032723)
chr7 (71-222)||(37533366-37533517)
chr7 (74-161)||(19122740-19122825)
chr7 (71-134)||(30245499-30245561)
chr7 (71-134)||(30255344-30255406)
chr7 (71-161)||(14681515-14681604)
chr7 (71-137)||(30244706-30244771)
chr7 (112-222)||(30253537-30253644)
chr7 (71-161)||(40230355-40230444)
chr7 (71-161)||(47129100-47129189)
chr7 (71-135)||(36109007-36109070)
chr7 (78-144)||(36534865-36534930)
chr7 (71-161)||(36622965-36623054)
chr7 (71-161)||(45754721-45754809)
chr7 (72-161)||(4124152-4124240)
chr7 (71-201)||(24838724-24838855)
[»] chr6 (37 HSPs)
chr6 (71-222)||(10074365-10074516)
chr6 (71-214)||(3409264-3409407)
chr6 (71-222)||(29518508-29518659)
chr6 (71-222)||(29518925-29519076)
chr6 (71-222)||(32741184-32741335)
chr6 (71-220)||(2579496-2579645)
chr6 (71-222)||(2377759-2377910)
chr6 (73-161)||(10074055-10074142)
chr6 (71-190)||(32460614-32460733)
chr6 (71-161)||(2378131-2378220)
chr6 (71-216)||(3058231-3058376)
chr6 (71-161)||(14748402-14748491)
chr6 (72-172)||(9062402-9062501)
chr6 (71-161)||(10911570-10911660)
chr6 (72-222)||(16454913-16455063)
chr6 (71-223)||(10073617-10073767)
chr6 (71-161)||(35210209-35210298)
chr6 (71-222)||(2579874-2580025)
chr6 (71-222)||(16454580-16454731)
chr6 (71-214)||(26544054-26544197)
chr6 (72-222)||(1127366-1127516)
chr6 (71-161)||(3415463-3415552)
chr6 (71-161)||(6999860-6999949)
chr6 (71-161)||(16107683-16107772)
chr6 (71-156)||(16108068-16108152)
chr6 (71-222)||(2578445-2578595)
chr6 (71-161)||(593773-593862)
chr6 (71-208)||(1950201-1950338)
chr6 (71-222)||(2578837-2578987)
chr6 (71-222)||(3409665-3409816)
chr6 (71-143)||(5832108-5832179)
chr6 (71-150)||(17135144-17135222)
chr6 (71-161)||(1846753-1846842)
chr6 (72-161)||(2843560-2843649)
chr6 (72-161)||(5958667-5958755)
chr6 (71-156)||(6071137-6071221)
chr6 (77-161)||(12092546-12092629)
[»] chr4 (58 HSPs)
chr4 (71-222)||(36629242-36629393)
chr4 (71-167)||(49076504-49076599)
chr4 (71-161)||(3244513-3244602)
chr4 (71-161)||(41370362-41370451)
chr4 (71-155)||(16888884-16888967)
chr4 (71-224)||(39792858-39793011)
chr4 (71-161)||(2740705-2740794)
chr4 (71-216)||(32941129-32941274)
chr4 (71-161)||(52884892-52884981)
chr4 (71-161)||(55933186-55933275)
chr4 (71-222)||(16889536-16889687)
chr4 (71-221)||(3340812-3340962)
chr4 (71-221)||(25483341-25483491)
chr4 (81-172)||(54108928-54109018)
chr4 (71-161)||(2741076-2741165)
chr4 (71-161)||(4955379-4955468)
chr4 (71-161)||(34646711-34646800)
chr4 (72-221)||(51768061-51768210)
chr4 (71-161)||(52884700-52884789)
chr4 (71-156)||(760194-760278)
chr4 (71-172)||(41707515-41707615)
chr4 (73-161)||(50630817-50630904)
chr4 (72-222)||(1731647-1731797)
chr4 (71-221)||(54017596-54017746)
chr4 (71-232)||(22183254-22183415)
chr4 (71-161)||(49880165-49880254)
chr4 (71-137)||(54741264-54741329)
chr4 (78-222)||(22028369-22028515)
chr4 (71-222)||(39404023-39404174)
chr4 (75-222)||(44620362-44620509)
chr4 (81-161)||(45496820-45496899)
chr4 (71-138)||(10245925-10245991)
chr4 (119-222)||(43827492-43827595)
chr4 (71-161)||(22028023-22028112)
chr4 (117-186)||(31691202-31691272)
chr4 (71-161)||(36572024-36572113)
chr4 (71-161)||(39404403-39404492)
chr4 (71-161)||(49302909-49303000)
chr4 (71-215)||(50002431-50002575)
chr4 (76-137)||(54343087-54343147)
chr4 (72-156)||(20826223-20826306)
chr4 (71-222)||(36608661-36608812)
chr4 (81-215)||(54108551-54108686)
chr4 (71-184)||(3341133-3341246)
chr4 (91-161)||(18932811-18932880)
chr4 (75-161)||(44621011-44621096)
chr4 (71-144)||(44620665-44620737)
chr4 (72-144)||(20825842-20825913)
chr4 (71-214)||(34004593-34004734)
chr4 (85-161)||(54936215-54936290)
chr4 (74-133)||(44620304-44620362)
chr4 (71-161)||(28034234-28034323)
chr4 (71-216)||(49076837-49076981)
chr4 (71-149)||(50459726-50459803)
chr4 (79-137)||(54017788-54017845)
chr4 (71-136)||(3700370-3700434)
chr4 (71-135)||(4390189-4390252)
chr4 (72-136)||(6975543-6975606)
[»] chr2 (51 HSPs)
chr2 (71-222)||(42514654-42514805)
chr2 (71-203)||(28254260-28254390)
chr2 (71-216)||(36005888-36006032)
chr2 (72-221)||(40679632-40679781)
chr2 (71-161)||(41283539-41283628)
chr2 (71-172)||(28531366-28531467)
chr2 (71-232)||(35580716-35580876)
chr2 (71-216)||(36178613-36178758)
chr2 (71-221)||(962603-962753)
chr2 (71-225)||(15880268-15880422)
chr2 (71-222)||(6421390-6421541)
chr2 (71-222)||(37105929-37106080)
chr2 (71-225)||(37106193-37106347)
chr2 (71-161)||(5542689-5542778)
chr2 (71-161)||(14745731-14745820)
chr2 (71-155)||(31899496-31899579)
chr2 (71-222)||(40733522-40733673)
chr2 (71-156)||(16542454-16542538)
chr2 (71-142)||(7598614-7598684)
chr2 (77-221)||(40163375-40163520)
chr2 (71-172)||(5543050-5543151)
chr2 (71-222)||(6712981-6713133)
chr2 (71-144)||(38796299-38796371)
chr2 (82-161)||(28254176-28254254)
chr2 (74-161)||(37895125-37895211)
chr2 (71-161)||(7598233-7598322)
chr2 (71-161)||(12529092-12529181)
chr2 (71-161)||(38796684-38796773)
chr2 (71-148)||(1769897-1769973)
chr2 (71-161)||(31468814-31468899)
chr2 (73-172)||(15511547-15511646)
chr2 (77-192)||(30313189-30313303)
chr2 (72-156)||(37894761-37894844)
chr2 (71-161)||(30323469-30323558)
chr2 (71-161)||(33561515-33561604)
chr2 (71-161)||(33731653-33731742)
chr2 (71-161)||(36178333-36178422)
chr2 (72-161)||(14745358-14745446)
chr2 (71-222)||(29676908-29677064)
chr2 (84-172)||(36178223-36178311)
chr2 (71-144)||(37632678-37632750)
chr2 (82-161)||(6422126-6422204)
chr2 (74-161)||(9231257-9231343)
chr2 (71-134)||(40733888-40733950)
chr2 (71-161)||(29874087-29874176)
chr2 (71-112)||(36785675-36785716)
chr2 (121-232)||(3673122-3673234)
chr2 (74-154)||(29676543-29676622)
chr2 (77-192)||(29873569-29873684)
chr2 (72-179)||(33953816-33953923)
chr2 (81-129)||(42515031-42515078)
[»] chr8 (51 HSPs)
chr8 (71-224)||(40518587-40518740)
chr8 (71-222)||(3669692-3669843)
chr8 (71-203)||(147456-147588)
chr8 (73-161)||(34835216-34835303)
chr8 (71-225)||(3038289-3038443)
chr8 (71-161)||(9608750-9608839)
chr8 (71-222)||(25561817-25561969)
chr8 (71-161)||(41972163-41972252)
chr8 (73-221)||(70277-70425)
chr8 (71-172)||(45121962-45122063)
chr8 (71-156)||(9309360-9309444)
chr8 (71-222)||(8918766-8918917)
chr8 (71-218)||(34834881-34835028)
chr8 (71-214)||(45122067-45122210)
chr8 (71-161)||(43398132-43398224)
chr8 (71-161)||(1013935-1014024)
chr8 (71-216)||(3670065-3670210)
chr8 (71-220)||(30359276-30359425)
chr8 (73-161)||(34835481-34835569)
chr8 (73-161)||(34835747-34835835)
chr8 (78-161)||(5420663-5420745)
chr8 (74-172)||(33113419-33113517)
chr8 (71-220)||(1014249-1014398)
chr8 (91-227)||(45122649-45122785)
chr8 (73-153)||(9482676-9482755)
chr8 (73-144)||(41416252-41416322)
chr8 (71-137)||(18372787-18372852)
chr8 (71-161)||(40579570-40579659)
chr8 (71-152)||(4154739-4154819)
chr8 (71-155)||(6876932-6877016)
chr8 (71-152)||(18373004-18373084)
chr8 (71-216)||(30441086-30441235)
chr8 (74-137)||(1514003-1514065)
chr8 (76-214)||(18372004-18372142)
chr8 (71-222)||(40518074-40518227)
chr8 (91-161)||(9483251-9483320)
chr8 (71-137)||(18372344-18372409)
chr8 (79-232)||(20870565-20870718)
chr8 (71-216)||(37544498-37544643)
chr8 (71-156)||(9620745-9620829)
chr8 (76-133)||(25561736-25561792)
chr8 (92-232)||(32305503-32305643)
chr8 (72-156)||(4154350-4154432)
chr8 (128-222)||(5915928-5916023)
chr8 (95-161)||(9609114-9609179)
chr8 (71-161)||(18380081-18380170)
chr8 (71-172)||(30359614-30359715)
chr8 (128-232)||(6651555-6651660)
chr8 (71-112)||(6731909-6731950)
chr8 (71-152)||(18372676-18372755)
chr8 (71-112)||(45123011-45123052)
[»] chr5 (41 HSPs)
chr5 (71-232)||(18603112-18603273)
chr5 (71-215)||(26074617-26074761)
chr5 (71-222)||(32487399-32487549)
chr5 (71-222)||(36568571-36568720)
chr5 (71-222)||(1028519-1028670)
chr5 (71-222)||(36492219-36492370)
chr5 (71-218)||(38427553-38427699)
chr5 (71-222)||(40296317-40296468)
chr5 (71-161)||(299494-299583)
chr5 (71-161)||(6224201-6224290)
chr5 (71-220)||(26590914-26591063)
chr5 (79-232)||(3295337-3295489)
chr5 (72-172)||(9498706-9498806)
chr5 (76-216)||(34753033-34753173)
chr5 (72-161)||(41170640-41170728)
chr5 (71-222)||(6500456-6500606)
chr5 (73-222)||(11416979-11417128)
chr5 (71-208)||(13415776-13415913)
chr5 (71-161)||(26075226-26075315)
chr5 (71-216)||(35150012-35150156)
chr5 (71-172)||(41632787-41632888)
chr5 (71-215)||(26074155-26074299)
chr5 (71-222)||(27502038-27502189)
chr5 (71-216)||(624201-624346)
chr5 (71-161)||(6500828-6500916)
chr5 (71-144)||(26074323-26074395)
chr5 (71-222)||(15370104-15370255)
chr5 (71-222)||(25327940-25328091)
chr5 (79-154)||(3295086-3295160)
chr5 (112-225)||(15370447-15370561)
chr5 (78-156)||(33747783-33747860)
chr5 (71-161)||(42508617-42508706)
chr5 (71-222)||(623823-623974)
chr5 (71-154)||(31509628-31509710)
chr5 (71-161)||(2411012-2411101)
chr5 (71-156)||(24489275-24489357)
chr5 (71-161)||(26074846-26074935)
chr5 (71-161)||(29549319-29549408)
chr5 (71-133)||(300964-301025)
chr5 (71-161)||(42405660-42405749)
chr5 (71-112)||(12662764-12662805)
[»] chr3 (50 HSPs)
chr3 (71-232)||(15772859-15773020)
chr3 (72-222)||(33803254-33803404)
chr3 (71-225)||(43346790-43346944)
chr3 (71-232)||(42342380-42342541)
chr3 (71-222)||(25739427-25739578)
chr3 (71-161)||(21832407-21832496)
chr3 (75-218)||(39934961-39935104)
chr3 (71-161)||(12114626-12114715)
chr3 (71-161)||(22304574-22304663)
chr3 (71-161)||(32462964-32463054)
chr3 (71-161)||(35946527-35946616)
chr3 (71-232)||(15773197-15773360)
chr3 (71-174)||(1634364-1634468)
chr3 (71-222)||(25755399-25755550)
chr3 (71-222)||(37990641-37990792)
chr3 (71-222)||(37990979-37991130)
chr3 (71-217)||(49336693-49336840)
chr3 (85-215)||(41359774-41359904)
chr3 (71-161)||(45901718-45901808)
chr3 (71-180)||(52634681-52634789)
chr3 (71-222)||(29644583-29644734)
chr3 (71-222)||(29644904-29645055)
chr3 (79-222)||(32589716-32589859)
chr3 (71-161)||(33175725-33175817)
chr3 (119-225)||(42342089-42342196)
chr3 (71-172)||(4823660-4823761)
chr3 (74-156)||(7767383-7767464)
chr3 (71-161)||(39389075-39389164)
chr3 (71-156)||(9240154-9240238)
chr3 (71-136)||(50612541-50612605)
chr3 (71-136)||(54017905-54017969)
chr3 (76-144)||(42584903-42584970)
chr3 (71-151)||(51886566-51886645)
chr3 (71-135)||(53118064-53118127)
chr3 (71-221)||(45395656-45395806)
chr3 (71-161)||(8327909-8327998)
chr3 (71-137)||(31190022-31190087)
chr3 (71-161)||(39336293-39336382)
chr3 (71-232)||(54018190-54018351)
chr3 (73-161)||(3135137-3135224)
chr3 (71-135)||(37726509-37726572)
chr3 (118-172)||(52634991-52635046)
chr3 (71-105)||(12747871-12747905)
chr3 (71-161)||(32462622-32462712)
chr3 (71-156)||(33362362-33362449)
chr3 (71-133)||(36986040-36986101)
chr3 (71-133)||(37011479-37011540)
chr3 (71-112)||(22304251-22304292)
chr3 (71-144)||(39914257-39914329)
chr3 (73-161)||(3384330-3384417)
[»] scaffold0078 (2 HSPs)
scaffold0078 (71-156)||(5362-5446)
scaffold0078 (71-155)||(4987-5070)
[»] scaffold0702 (2 HSPs)
scaffold0702 (71-222)||(516-667)
scaffold0702 (71-138)||(229-295)
[»] scaffold0734 (2 HSPs)
scaffold0734 (71-156)||(5782-5866)
scaffold0734 (71-215)||(5401-5546)
[»] scaffold0391 (2 HSPs)
scaffold0391 (71-161)||(1170-1259)
scaffold0391 (71-112)||(3097-3138)
[»] scaffold0171 (1 HSPs)
scaffold0171 (71-161)||(17520-17609)
[»] scaffold0027 (1 HSPs)
scaffold0027 (71-222)||(47365-47516)
[»] scaffold0504 (1 HSPs)
scaffold0504 (71-144)||(10192-10264)
[»] scaffold0113 (1 HSPs)
scaffold0113 (71-105)||(39843-39877)


Alignment Details
Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 44685381 - 44685605
Alignment:
Q  1 cttgaatcaatgatgtccacaattcattttggtgtacatacgtggtattttcctatcacacacaacacgcgt-----------gtgagttatatgtccca 89  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||           |||||||||||||||||    
T  44685381 cttgaatcaatgatgtccacaattcattttggtgtacatacgtagtattttcctatcacacacaa-acgtgttgtgtgcaagtgtgagttatatgtccca 44685479  T
Q  90 tatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagtttgggtaacagtgcgacgtctttctctctt 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  44685480 tatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaatgtttgggtaacagtgtgacgtctttctctctt 44685579  T
Q  190 gt-ggggtagttctaacctcaatgtg 214  Q
    || ||||||||||||||||| |||||    
T  44685580 gtgggggtagttctaacctcgatgtg 44685605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 66625 - 66480
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||| | ||||||  || ||||||| | ||||||||| |    
T  66625 gtgtgagttatatgttccatatcggatagaaaagtaaagg-ttgaacaccttataagtaagaggatccataaacatatggccttaaggttttgggtaaga 66527  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    ||    ||||| |||| |||||| ||| |||||| ||||||||||||    
T  66526 gtatagcgtctctctcgcttgtgcggttgttctagcctcaatgtgga 66480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 22077648 - 22077534
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| | ||||||| | ||||||||| |    
T  22077648 gtgtgagttatatgtctcacatcggatagaaaagtaaagg-ttgaacaccttataagtaagaggacccataaactcgtagccttaaggttttgggtaaga 22077550  T
Q  170 gtgcgacgtctttctc 185  Q
    ||| | ||||| ||||    
T  22077549 gtgtggcgtctctctc 22077534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 24132137 - 24132043
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagtttgggtaa 167  Q
    |||||||||||||||||  |||||||||||||||||||| ||||| ||||||||| |||| ||| | |||||||||||||||||| ||||||||||    
T  24132137 tgtgagttatatgtccctcatcggatagaaaagtaaagg-ttgaacaccttataaataaggggatccataaactcattgccttaaggtttgggtaa 24132043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 44290978 - 44290889
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| ||||    
T  44290978 gtgtgagttatatgtcccacatcggataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttt 44290889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 222
Target Start/End: Complemental strand, 3537753 - 3537601
Alignment:
Q  70 cgtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaac 168  Q
    ||||| |||||||||||||| |||||||| || |||||||| ||||| ||||||| |||||||||||| |||||| ||||| ||||| | |||||||||     
T  3537753 cgtgttagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttatgagtaagaggacctataaacccattggcttaaggttttgggtaag 3537655  T
Q  169 agtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    |||| | ||||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  3537654 agtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 3537601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 71 - 231
Target Start/End: Complemental strand, 26661675 - 26661515
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||||| || || |||||||||| ||| ||||||||||| |||||||| |||||||||||||||||| | ||||||||| |    
T  26661675 gtgtgagttatatgtcccacatcgggtaaaagagtaaaggtt-gaacaccttataagtgagaggacccataaactcattgccttaaggttttgggtaaga 26661577  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactc 231  Q
    ||| |  |||| |||| |||||| ||| |||| | |||| || |||| ||||| ||| ||||    
T  26661576 gtgtggtgtctctctcgcttgtgtggttgttcaagcctcgatatggacggtccccctaactc 26661515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 44290611 - 44290460
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||||| ||| | |||||||||||||||||| |||||| ||||||||||| | ||||||||| |    
T  44290611 gtgtgagttatatgtcccacatcggataaaatagtaaaggtt-gaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 44290513  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||  |  ||||||||  |||||  ||| |||||| |||| ||||||| |||||    
T  44290512 gtatggtgtctttcttgcttgtacggttgttctagcctcgatgtggacggtcc 44290460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 3550725 - 3550814
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| ||| |||| || |||||||||| ||| |||||||||||||||||||  |||||| ||||||||||||||||    
T  3550725 gtgtgagttatatgtcccacatcagataaaatagtaaaggtt-gaacaccttataagtaagaggactcataaacccattgccttaaagttt 3550814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 5320118 - 5320029
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||| ||| |||||||||||||||||| ||| ||| ||||||||||| |||||||| |||||||||| ||||||| ||||    
T  5320118 gtgtgagttatatgttccacatcggatagaaaagtaaaagtt-gaacaccttataagtgagaggacccataaactcatagccttaaggttt 5320029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 17294582 - 17294671
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| || ||||||||||||||||| |||||| ||||||||||| ||||    
T  17294582 gtgtgagttatatgtcccacatcggataaaagagtaaagg-ttgaacactttataagtaagaggacccataaacccattgccttaaggttt 17294671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 24600467 - 24600378
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |  ||||||||||||| ||  |||||||||||| ||||| ||||    
T  24600467 gtgtgagttatatgtcccatatcggatagaaaagtaaagg-ttgaacatattataagtaagagaactcataaactcattgtcttaaggttt 24600378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 41142377 - 41142466
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| ||||||||||||| |||||| |||||| ||||||||||| ||||    
T  41142377 gtgtgagttatatgtcccacatcggataaaacagtaaagg-ttgaacaccttataagtaaaaggacccataaacccattgccttaaggttt 41142466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 41156996 - 41157085
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||| |||||||||||||| |||||| || |||||||||| ||| |||||||||||||||||||| ||||||||||||| |||| ||||    
T  41156996 gtgtgaattatatgtcccataacggataaaagagtaaaggtt-gaacaccttataagtaagaggacccataaactcattgctttaaggttt 41157085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 22077243 - 22077112
Alignment:
Q  91 atcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcgacgtctttctctctt 189  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||| ||| | ||||| ||| |||| |||||||  ||| |||    
T  22077243 atcggatagaaaagtaaaggtt-gaataccttataagtaagaggacccataaactcattgccctaaggttttggataagagtgtgacgtctccctcactt 22077145  T
Q  190 gtggggtagttctaacctcaatgtggatggtcc 222  Q
     || ||| |||| | |||| ||||||| |||||    
T  22077144 atgcggttgttcaagcctcgatgtggacggtcc 22077112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 66230 - 66151
Alignment:
Q  82 atgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||||  || ||||||| ||||    
T  66230 atgtctcacatcggatagaaaagtaaaggtttgaacaccttataagtaagaggacccataaacctatggccttaaggttt 66151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 48588641 - 48588491
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||| ||||||| | |||||||| || |||||||||| ||| ||||||||||||||| ||||  |||| |||||||||||| | ||||||||| |    
T  48588641 gtgtgagttctatgtccgacatcggataaaatagtaaaggtt-gaacaccttataagtaagaagacccgtaaattcattgccttaaggttttgggtaaga 48588543  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtc 221  Q
    |||||  |||| |||  |||||| ||| |||||| |||| ||||||| ||||    
T  48588542 gtgcggtgtctctcttacttgtgcggttgttctagcctcgatgtggacggtc 48588491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 32594869 - 32594780
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| | ||| |||| || |||||||||| ||| |||||||||||||||||||| |||||||||||| ||||| ||||    
T  32594869 gtgtgagttatatgtcctacatcagataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaactcattgtcttaaggttt 32594780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 220
Target Start/End: Original strand, 34364512 - 34364661
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || |||||||| || |||||||| ||||| |||||||||||||||||| |  ||||| ||| ||||||| | ||||||||| |    
T  34364512 gtgtgagttatatgtctcacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggatccgtaaacccatagccttaaggttttgggtaaga 34364610  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggt 220  Q
    ||| || |||| |||| ||| || ||| | |||| |||| |||||||||||    
T  34364611 gtgtgatgtctctctcgcttatgcggttgctctagcctcgatgtggatggt 34364661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 220
Target Start/End: Original strand, 34364930 - 34365079
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || |||||||| || | |||||||| ||| |||||||||||||||||||| |||||| ||| ||||||| | ||||||||| |    
T  34364930 gtgtgagttatatgtcacacatcggataaaataataaaggtt-gaacaccttataagtaagaggacccataaacccatagccttaaggttttgggtaaga 34365028  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggt 220  Q
    ||| |  |||| |||| ||| ||  || | ||||||||| |||||||||||    
T  34365029 gtgtggtgtctctctcgcttatgcagttgctctaacctcgatgtggatggt 34365079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 41184578 - 41184489
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||| || |||||||| || |||||||||| ||| || ||||||||||||||||| |||||| ||||||||||| ||||    
T  41184578 gtgtgagttatatgtctcacatcggataaaatagtaaaggtt-gaacactttataagtaagaggacccataaacccattgccttaaggttt 41184489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 3537300 - 3537228
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||| ||||||    
T  3537300 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggacccataaac 3537228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 31767314 - 31767163
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||| ||||||||| ||| |||||||| || |||||||||| ||| |||||||||||||||||||| || |||  | |||||||| | ||||||||| |    
T  31767314 gtgtgggttatatgttccacatcggataaaacagtaaaggtt-gaacaccttataagtaagaggacccattaacctaatgccttaaggttttgggtaaga 31767216  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| ||||||| |||  |||||| ||| ||||||  ||| ||||||| |||||    
T  31767215 gtgtgacgtctatcttgcttgtgtggttgttctagactcgatgtggacggtcc 31767163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 225
Target Start/End: Original strand, 40082412 - 40082565
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||| | |||||||| || |||||||| ||||| |||||||||||||||||| | ||||| |||||||||||| | ||||||||| |    
T  40082412 gtgtgagttatatgtcctacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggatc-ataaattcattgccttaaggttttgggtaaga 40082509  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcc 225  Q
    ||| |   ||| |||  |||||| | | |||||| |||| |||||||| |||||||    
T  40082510 gtgtggtatctctcttgcttgtgcgtttgttctagcctcgatgtggatagtcctcc 40082565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 154
Target Start/End: Original strand, 41157380 - 41157462
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcctt 154  Q
    ||||||||||||||||||| ||| |||| || |||||| ||| ||| |||||||||||||||||||| |||||| |||||||||    
T  41157380 gtgtgagttatatgtcccacatcagataaaagagtaaaagtt-gaacaccttataagtaagaggacccataaacccattgcctt 41157462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 225
Target Start/End: Complemental strand, 3875479 - 3875330
Alignment:
Q  76 agttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcg 174  Q
    ||||||||||| || |||||||| ||||||||||||| | | |||||||||||||||||||  |||||| ||||||||||| | ||| ||||| | || |    
T  3875479 agttatatgtcacacatcggataaaaaagtaaaggtt-gtacaccttataagtaagaggactcataaacccattgccttaaggttttaggtaagaatgtg 3875381  T
Q  175 acgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcc 225  Q
      |||| |||| || ||| ||| |||||| |||| ||||||| ||||||||    
T  3875380 gagtctctctcactagtgtggttgttctagcctcgatgtggacggtcctcc 3875330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 5575110 - 5575252
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacag 170  Q
    ||||| ||||||||||||  |||||||||| |||||||| ||||| |||||||||||||||||||| |||||  ||| || |||| | ||||| ||| ||    
T  5575110 tgtgaattatatgtcccacgtcggatagaagagtaaagg-ttgaacaccttataagtaagaggacctataaatccatagctttaaggttttggataagag 5575208  T
Q  171 tgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    || | ||||  |||||||| || |||||||||| |||| |||||||    
T  5575209 tgtggcgtc--tctctcttatgaggtagttctagcctcgatgtgga 5575252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 30630791 - 30630702
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||| ||||||||| || |||||||| |||| ||||||||||| | | ||||||||||||| ||| |||||| ||||||||||||||||    
T  30630791 gtgtgatttatatgtctcacatcggataaaaaattaaaggtttgaca-ctttataagtaagagaacccataaacacattgccttaaagttt 30630702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 39066353 - 39066264
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||| | ||| |||||||||||||||||||| ||||| ||||||||| ||||| |||| ||||| |||||| ||||| ||||    
T  39066353 gtgtgagttatatattccacatcggatagaaaagtaaagg-ttgaacaccttataactaagatgacccataaaatcattgtcttaaggttt 39066264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 50052176 - 50052087
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| | |||||||||||||||||| ||||||  |||  ||||||||||    
T  50052176 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacatcttataagtaagaggacccataaacctattttcttaaagttt 50052087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 21378194 - 21378122
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    |||| |||||||||||||| ||||||||||| |||||||| ||||| | |||||||||||||||||| ||||||    
T  21378194 gtgtcagttatatgtcccagatcggatagaacagtaaagg-ttgaatatcttataagtaagaggacccataaac 21378122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 29798204 - 29798288
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    ||||||||||||||||| | || ||||| || |||||||||| ||| |||||||||||||||||||  |||||| |||||||||||    
T  29798204 gtgtgagttatatgtcctacattggataaaatagtaaaggtt-gaacaccttataagtaagaggactcataaacccattgccttaa 29798288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 216
Target Start/End: Original strand, 22793283 - 22793429
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactca-ttgccttaaag-tttgggtaac 168  Q
    ||||||||||||||||||| |||| ||||||||||| ||| |||||||| |||||||| |||||| | |||||| || ||||||||  | |||| ||||     
T  22793283 gtgtgagttatatgtcccacatcgtatagaaaagtagagg-ttgaaaactttataagtgagaggatccataaacccatttgccttacggttttgagtaag 22793381  T
Q  169 agtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    |||| ||||||| |||  |||||| ||| |||||  ||||||| ||||    
T  22793382 agtgtgacgtctctcttacttgtgtggttgttctggcctcaatatgga 22793429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 37556116 - 37556205
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaa-agtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| ||| |||||||| ||||| | |||||||||||||||||| |||||| ||| ||||||| ||||    
T  37556116 gtgtgagttatatgtcccacatcggataaaaatagtaaagg-ttgaacatcttataagtaagaggacc-ataaacccatagccttaaggttt 37556205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 45084387 - 45084457
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataa 142  Q
    ||||||||||||| ||||| |||||||| || |||||||| ||||| |||||||||||||||||||| ||||    
T  45084387 gtgtgagttatatctcccacatcggataaaacagtaaagg-ttgaacaccttataagtaagaggacccataa 45084457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 4956218 - 4956311
Alignment:
Q  93 cggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcgacgtctttctct 186  Q
    |||||||||||||||||||| ||| | |||||||||||||||| | |||||||||||||  ||||| ||| ||||| |||| ||||||| |||||    
T  4956218 cggatagaaaagtaaaggtt-gaacatcttataagtaagaggatccataaactcattgctctaaagttttaggtaaaagtgtgacgtctatctct 4956311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 22077981 - 22077900
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcct 153  Q
    |||||||||||||||   | ||||||||||||| |||||||| ||| | |||||||||||||||||| |||||||||| ||||    
T  22077981 gtgtgagttatatgttttaaatcggatagaaaaataaaggtt-gaacatcttataagtaagaggacccataaactcatagcct 22077900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 26662051 - 26661962
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||| ||||||||| |||| || |||||||| ||||| ||||||||||| ||| |||| ||||||  |||||||||| ||||    
T  26662051 gtgtgagttatatatcccatatcagataaaagagtaaagg-ttgaacaccttataagtgagaagacccataaaccgattgccttaaggttt 26661962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 222
Target Start/End: Original strand, 14318875 - 14319023
Alignment:
Q  74 tgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtg 172  Q
    |||||||||||| |||  ||||||| || |||||||||| ||| ||||||||||||||| |||| |||||   |||||||||| | ||||||||| ||||    
T  14318875 tgagttatatgttccacgtcggataaaatagtaaaggtt-gaacaccttataagtaagaagacccataaatctattgccttaaggttttgggtaagagtg 14318973  T
Q  173 cgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
     |  |||| |||   ||||| ||| |||||| |||||||||||| |||||    
T  14318974 tggtgtctctcttatttgtgcggttgttctagcctcaatgtggacggtcc 14319023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 34649443 - 34649594
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||   || ||| ||||||  | |||||||| | ||||||||| |    
T  34649443 gtgtgagttatatgtcccacatcggataaaagagtaaagg-ttgaacaccttataagtgcaagaacccataaacctaatgccttaaggttttgggtaaga 34649541  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| | ||||| |||  || ||| ||| |||||| |||| ||||||| |||||    
T  34649542 gtgaggcgtctctcttgctagtgtggttgttctagcctcgatgtggacggtcc 34649594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 1188741 - 1188627
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||| |||||||||||||||||||  ||| ||||| |  |||||||| ||| |||  ||||||||||||| |||| | ||||||||| |    
T  1188741 gtgtgagttatatgttccatatcggatagaaaagtggagg-ttgaatattttataagtgagaagactcataaactcattgctttaaggttttgggtaaaa 1188643  T
Q  170 gtgcgacgtctttctc 185  Q
    ||| | ||||| ||||    
T  1188642 gtgtggcgtctctctc 1188627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 9955912 - 9956057
Alignment:
Q  71 gtgtgagttatatgtcccatatcggat-agaaaagtaaaggtttgaaaaccttataagtaagagga-ccaataaactcattgccttaaag-tttgggtaa 167  Q
    ||||||||||||||||||| ||| ||| | ||||||||||| ||||| || ||||||||||||||| ||| |||||  |||||||||| | |||||||||    
T  9955912 gtgtgagttatatgtcccacatcagataaaaaaagtaaagg-ttgaacacattataagtaagaggacccattaaaccaattgccttaaggttttgggtaa 9956010  T
Q  168 cagtgcgacgtctttctctcttgtggggtagttctaacctcaatgtg 214  Q
     |||| || |||| |||  |||||| ||| | |||| |||| |||||    
T  9956011 gagtgtgatgtctctcttgcttgtgcggttgctctagcctcgatgtg 9956057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 41759488 - 41759577
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||| || |||||||| || |||||| | ||||| ||||||||||||||| || | |||||  ||||||||||| ||||    
T  41759488 gtgtgagttatatgtcacacatcggataaaatagtaaaag-ttgaacaccttataagtaagatgatccataaatccattgccttaaggttt 41759577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 37850753 - 37850681
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    ||||||||||||||||||| |||| ||| || |||| ||| ||||| |||||||||||||||| ||| ||||||    
T  37850753 gtgtgagttatatgtcccacatcgcataaaacagtagagg-ttgaacaccttataagtaagagaacccataaac 37850681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 11977285 - 11977436
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||||| || || |||||| | ||||| |||||||||||||||| ||  ||||||  | |||||||| | ||||||||| |    
T  11977285 gtgtgagttatatgtcccacatcgggtaaaacagtaaatg-ttgaacaccttataagtaagagcactcataaacctaatgccttaaggttttgggtaaga 11977383  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| || |||| |||  |  ||| ||| |||||| |||| ||||||| |||||    
T  11977384 gtgtgatgtctctcttgcaagtgcggttgttctagcctcgatgtggacggtcc 11977436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 37555735 - 37555800
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggacc 137  Q
    |||||||||||| |||||| |||||||| || ||| |||| ||||| || |||||||||||||||||    
T  37555735 gtgtgagttataagtcccacatcggataaaatagtgaagg-ttgaatacattataagtaagaggacc 37555800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 38804508 - 38804419
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||| |||||| |||| ||| || |||||||| ||||| || ||||||||||||||| | |||||| |||  |||||| ||||    
T  38804508 gtgtgagttatacgtcccacatcgaataaaagagtaaagg-ttgaacacattataagtaagaggatccataaacccataaccttaaggttt 38804419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 5528902 - 5528830
Alignment:
Q  76 agttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcatt 149  Q
    ||||||||||| || |||||||| || |||||||| ||||| | ||||||| |||||||||  |||||||||||    
T  5528902 agttatatgtctcacatcggataaaagagtaaagg-ttgaacatcttataaataagaggactcataaactcatt 5528830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 45839635 - 45839707
Alignment:
Q  74 tgagttatatgtcccatatcggatagaaaagtaaaggttt----gaaaaccttataagtaagaggaccaataaa 143  Q
    |||||||||||||||| ||||||||||||| ||||||||     ||| ||||||||||||||| |||| |||||    
T  45839635 tgagttatatgtcccacatcggatagaaaa-taaaggttgaatcgaacaccttataagtaagaagacccataaa 45839707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 7517585 - 7517736
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| | ||||||||| |    
T  7517585 gtgtgagttatatgtcccacatcggataaaagagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 7517683  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||| |||||| ||| |||||| |||| |||||| ||||||    
T  7517684 gtgtggtgtctgtctcacttgtgtggttgttctagcctcgatgtgggtggtcc 7517736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 1085769 - 1085608
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||||| ||| || ||||||||||||||||| |||||| ||||||||||| | ||||||||| |    
T  1085769 gtgtgagttatatgtcccacatcggataaaatagtaaaggtt-gaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 1085671  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
    ||| | ||||| |||  |||||| ||| |||||| |||| ||||||| ||||| |||| ||||    
T  1085670 gtgtggcgtctctcttacttgtgtggttgttctagcctcgatgtggacggtccccctggctcc 1085608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 30244275 - 30244426
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||  |||||| ||||||||||| | ||||||||| |    
T  30244275 gtgtgagttatatgtcccacatcggataaaagagtaaagg-ttgaagaccttataagtaagaggactcataaacccattgccttaaggttttgggtaaga 30244373  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||| |||||| ||| |||| | |||| |||||||||||||    
T  30244374 gtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggatggtcc 30244426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 37533163 - 37533013
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| || ||||| || |||||||||| ||| |||||||||||||||||||| |||||||||||||||||| | ||||||||| |    
T  37533163 gtgtgagttatatgtcccacattggataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaa-a 37533066  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| | | ||||||||||| ||||||| |||||    
T  37533065 gtgtggtgtctctcttgcttgtgcgcttgttctaacctcgatgtggacggtcc 37533013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 45434641 - 45434784
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||| | |||||||| | ||||||||| |    
T  45434641 gtgtaagttatatgtcccacatcggataaaaaagtaaagg-ttgaacaccttataagtaagaggacccataaacttactgccttaaggttttgggtaaga 45434739  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtg 214  Q
    ||| || |||| |||  ||||||| || |||||| |||| |||||    
T  45434740 gtgtgatgtctctcttacttgtggagttgttctagcctcgatgtg 45434784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 16569201 - 16569290
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||| || ||||||||||| |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| ||||    
T  16569201 gtgtgagttatatgtctcacatcggatagaacagtaaaggtt-gaataccttataagtaagaggacccataaacccattgccttaaggttt 16569290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 16596461 - 16596372
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||| || ||||||||||| |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| ||||    
T  16596461 gtgtgagttatatgtctcacatcggatagaacagtaaaggtt-gaataccttataagtaagaggacccataaacccattgccttaaggttt 16596372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 30245082 - 30245229
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||| ||| |||||||| || |||||||||| ||| ||||||||||||||| |||| |||||||||||||||||| | ||||||||| |    
T  30245082 gtgtgagttatatgttccacatcggataaaagagtaaaggtt-gaacaccttataagtaagacgacccataaactcattgccttaaggttttgggtaaga 30245180  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |     | ||||||||||| ||| |||| | |||| |||||||||||||    
T  30245181 gtgtg----gtgtctctcttgtgtggttgttcaagcctcgatgtggatggtcc 30245229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 8128594 - 8128505
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| ||||||||||| |||||| |||  |||||| ||||    
T  8128594 gtgtgagttatatgtcccatatcggatagaaaaataaagg-ttgaacaccttatatgtaagaggacccataaacccataaccttaaggttt 8128505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 22566815 - 22566726
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||| |||||||||| |||||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| ||||    
T  22566815 gtgtgagtaatatgtcccacatcggataaaagagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttt 22566726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 22567191 - 22567041
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||| |||||||| | |||||||| || |||||||||| ||| |||||||||||||||||||| |||||||||||||||||| | ||| ||||| |    
T  22567191 gtgtgagtaatatgtcc-acatcggataaaagagtaaaggtt-gaacaccttataagtaagaggacccataaactcattgccttaaggtttttggtaaga 22567094  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||||||| ||||   |||| |||||||||||||    
T  22567093 gtgtggtgtctctcttgcttgtggggttgttcgggcctcgatgtggatggtcc 22567041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 28301696 - 28301613
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcctta 155  Q
    |||||||||||||||| || |||||||||||||||||| | | ||| |||||||||||||||||||| |||||| ||||||||||    
T  28301696 gtgtgagttatatgtctcacatcggatagaaaagtaaaagct-gaacaccttataagtaagaggacccataaacccattgcctta 28301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 161
Target Start/End: Original strand, 24177443 - 24177529
Alignment:
Q  74 tgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||| |||||||| || |||||||| | ||| |||||||||||||| ||||| |||||| ||||||||||||||||    
T  24177443 tgagttatatgtcccacatcggataaaagagtaaaggct-gaacaccttataagtaagcggacccataaacccattgccttaaagttt 24177529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 7554030 - 7554119
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||| | |||||| ||| ||||||| ||||    
T  7554030 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggatccataaacccatagccttaaggttt 7554119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 20599319 - 20599408
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||||||||||||| |||||||||||  | || || |||||| |||||||||  |||||||||||||||||| ||||    
T  20599319 gtgtgagttatatgtcccatatcggataaaaaagtaaagg-ataaacactttataaataagaggacatataaactcattgccttaacgttt 20599408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 23529 - 23441
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||| ||| |||||||| || |||||||||| ||| |||||||||||||||||||| ||||||  |||||||||| ||||    
T  23529 tgtgagttatatgttccacatcggatacaatagtaaaggtt-gaacaccttataagtaagaggacccataaacctattgccttaaggttt 23441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 11845198 - 11845285
Alignment:
Q  73 gtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||| ||| |||||||| || |||||||||| ||| |||||||||||||||||||| |||||  ||||||||||| ||||    
T  11845198 gtgagttatatgttccacatcggataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaatccattgccttaaggttt 11845285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 41854643 - 41854800
Alignment:
Q  74 tgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt-gggtaacagtg 172  Q
    |||||||||||||||| ||| | || || |||||||||| ||| |||||||||| |||| |||| |||||   | |||||||| |||| |||||| ||||    
T  41854643 tgagttatatgtcccacatcag-taaaagagtaaaggtt-gaacaccttataagcaagatgacctataaatataatgccttaaggttttgggtaagagtg 41854740  T
Q  173 cgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
     |||||||||||  |||||| ||| |||||| ||||||||| || ||||| |||||||||    
T  41854741 tgacgtctttcttacttgtgcggttgttctagcctcaatgtagacggtccccctgactcc 41854800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 6054565 - 6054654
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||| ||||||||||| || |||||||| || |||||| ||| ||| |||||||||||||||||||| |||||| ||||||||||| ||||    
T  6054565 gtgttagttatatgtctcacatcggataaaatagtaaatgtt-gaacaccttataagtaagaggacccataaacacattgccttaaggttt 6054654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 29157570 - 29157659
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| | |||||| || |||||||| ||||| ||||||||||||||| |||| |||||  ||||||||||| ||||    
T  29157570 gtgtgagttatatgtcccacaccggataaaatagtaaagg-ttgaacaccttataagtaagacgacccataaatccattgccttaaggttt 29157659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 34218186 - 34218033
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacag 170  Q
    ||||||||||||||| || |||||||| ||||||||| | ||||| ||||||||||| |||||||  |||||| ||||| ||||| | ||||||||| ||    
T  34218186 tgtgagttatatgtctcacatcggataaaaaagtaaatg-ttgaacaccttataagtgagaggactcataaacccattgtcttaaggttttgggtaagag 34218088  T
Q  171 tgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcc 225  Q
    || |  |||| |||| |||||  ||| |||| | |||| ||||||| ||||||||    
T  34218087 tgtggtgtctctctcgcttgtatggttgttcaagcctcgatgtggacggtcctcc 34218033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 36939886 - 36939797
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||| ||| || |||||| ||| ||| |||||||||||||||||||| |||||  ||||||||||| ||||    
T  36939886 gtgtgagttatatgtcccaaatcgtataaaatagtaaaagtt-gaacaccttataagtaagaggacccataaatccattgccttaaggttt 36939797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 45433246 - 45433407
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    ||||||||||||||  ||| |||||||| || |||||||| ||||| |||||||||||||||| ||  ||||||  |||||||||| | ||||||||| |    
T  45433246 gtgtgagttatatgatccacatcggataaaagagtaaagg-ttgaacaccttataagtaagagaactcataaacctattgccttaagattttgggtaaga 45433344  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
    ||| |  |||| |||  |||||||||| |||||| |||| ||||||  ||||| |||| ||||    
T  45433345 gtgtggtgtctctcttgcttgtggggttgttctagcctcgatgtggtcggtccccctggctcc 45433407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 215
Target Start/End: Complemental strand, 40094927 - 40094783
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || |||| ||| || ||||||||||  || |||||||||||||||||||| |||||| ||| | ||||| | ||||||||| |    
T  40094927 gtgtgagttatatgtctcacatcgaataaaagagtaaaggttc-aacaccttataagtaagaggacccataaacccatcgtcttaaggttttgggtaaga 40094829  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgg 215  Q
    ||| | ||||| |||  |||||| ||| |||||| |||| ||||||    
T  40094828 gtgtggcgtctctcttgcttgtgaggttgttctagcctcgatgtgg 40094783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 41910747 - 41910663
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| ||||||||| | |||||||| |||||| ||||| |||||    
T  41910747 gtgtgagttatatgtcccacatcggataaaagagtaaagg-ttgaataccttataactgagaggacccataaacccattggcttaa 41910663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 118454 - 118339
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||| |||||||||||||| ||| |||||||||||||||| ||||| |||| ||||||||||||| | |||||| |||| || ||| | ||||||||| |    
T  118454 gtgtaagttatatgtcccacatcagatagaaaagtaaagg-ttgaacacctaataagtaagaggatccataaacccattaccgtaaggttttgggtaaga 118356  T
Q  170 gtgcgacgtctttctct 186  Q
    ||| | ||||| |||||    
T  118355 gtgtggcgtctatctct 118339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 43241500 - 43241589
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||| ||| |||||||| |||| |||||| ||||| ||||||||||||| |||||  ||||||| |||| ||||| ||||    
T  43241500 gtgtgagttatatgttccacatcggataaaaaaataaagg-ttgaacaccttataagtaaaaggactcataaacttattgacttaaggttt 43241589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 1085391 - 1085312
Alignment:
Q  81 tatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||| || |||||| ||| ||| | || ||||||||||| ||| |||||||||||||||||| ||||    
T  1085391 tatgtcccatatcggataaaatagtaaaagtt-gaacaactcataagtaagagaacccataaactcattgccttaaggttt 1085312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 30032572 - 30032723
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||| ||| || ||| |||  ||||| |||||||||||||||| | | ||||||  || ||||||| | ||||||||| |    
T  30032572 gtgtgagttatatgtcccacatcgaataaaagagt-aagtgttgaacaccttataagtaagagtatccataaacctatagccttaaggttttgggtaaga 30032670  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| ||| ||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  30032671 gtgtgacatctctcttgcttgtgcggttgttctatcctcgatgtggacggtcc 30032723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 37533517 - 37533366
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||| | | || | ||| || |||||||||| ||| |||||||||||||||||||| |||||  ||||||||||| | ||||||||| |    
T  37533517 gtgtgagttatatgttctacattgaataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaaga 37533419  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| | |  |||||| ||| |||||| |||| ||||||| |||||    
T  37533418 gtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtcc 37533366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 161
Target Start/End: Original strand, 19122740 - 19122825
Alignment:
Q  74 tgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||| | |||||||| || |||||||||| ||| |||||||||||||||||||  |||||  ||||||||||| ||||    
T  19122740 tgagttatatgtcc-acatcggataaaatagtaaaggtt-gaacaccttataagtaagaggactcataaatccattgccttaaggttt 19122825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 30245499 - 30245561
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagagg 134  Q
    ||||||||||||||||||| ||| |||| || |||||||| ||||| |||||||||||||||||    
T  30245499 gtgtgagttatatgtcccacatcagataaaagagtaaagg-ttgaacaccttataagtaagagg 30245561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 30255344 - 30255406
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagagg 134  Q
    ||||| ||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||    
T  30255344 gtgtgcgttatatgtcccacatcggataaaagagtaaagg-ttgaacaccttataagtaagagg 30255406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 14681515 - 14681604
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||| |||||||||||||| ||| |||| || |||||||| ||||| ||||| ||||||||||| || |||||| ||||| ||||| ||||    
T  14681515 gtgtaagttatatgtcccacatcagataaaatagtaaagg-ttgaacaccttgtaagtaagagggcccataaacccattgtcttaaggttt 14681604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 30244706 - 30244771
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggacc 137  Q
    ||||||||||||||||||| || ||||| || |||||||| ||||| ||||||||| ||||||||||    
T  30244706 gtgtgagttatatgtcccacattggataaaagagtaaagg-ttgaacaccttataaataagaggacc 30244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 30253537 - 30253644
Alignment:
Q  112 ttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcgacgtctttctctcttgtggggtagttctaacctcaa 210  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||| | ||||||||| |||| |     | ||||||||||| ||| |||| | |||| |    
T  30253537 ttgaagaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtg----gtgtctctcttgtgtggttgttcaagcctcga 30253632  T
Q  211 tgtggatggtcc 222  Q
    ||||||||||||    
T  30253633 tgtggatggtcc 30253644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 40230444 - 40230355
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||| |||||||||||||| |||| ||| ||||||||| ||| ||| | |||||||||||||||||| |||||| ||| | ||||| ||||    
T  40230444 gtgtaagttatatgtcccacatcgaataaaaaagtaaaagtt-gaacatcttataagtaagaggacccataaacccatagtcttaaggttt 40230355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 47129100 - 47129189
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||| || |||||||| || |||||||| |||||   |||||||||||||||||| |||||| ||| || |||| ||||    
T  47129100 gtgtgagttatatgtctcacatcggataaaatagtaaagg-ttgaacctcttataagtaagaggacccataaacccatcgctttaaggttt 47129189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 36109070 - 36109007
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagagga 135  Q
    ||||||||||||| || || |||||||| || |||||||| ||||| ||||||||||||||||||    
T  36109070 gtgtgagttatatttctcacatcggataaaagagtaaagg-ttgaacaccttataagtaagagga 36109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 36534930 - 36534865
Alignment:
Q  78 ttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    ||||||||||||  ||||||| || |||| ||||| ||| |||||||||||||||||||| ||||||    
T  36534930 ttatatgtcccacctcggataaaacagtagaggtt-gaacaccttataagtaagaggacccataaac 36534865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 36622965 - 36623054
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || ||||||||||  || |  ||||||||| ||||| | |||||  ||||||||||| ||||    
T  36622965 gtgtgagttatatgtcccacatcggataaaatagtaaaggtta-aacattttataagtaggaggatccataaatccattgccttaaggttt 36623054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 45754721 - 45754809
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| | |||||||| || |||||| ||| ||| ||||||||||||||| |||  |||||| ||| ||||||| ||||    
T  45754721 gtgtgagttatatgtcc-acatcggataaaatagtaaatgtt-gaacaccttataagtaagatgactcataaacccatagccttaaggttt 45754809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 4124240 - 4124152
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||| ||| |||||| | ||||| ||||||| |  |||||||| | | |||||||| |||||||||||||||||||||| |||| ||||    
T  4124240 tgtgaattacatgtcctacatcggttagaaaatttgaggtttgaca-ctttataagtgagaggaccaataaactcattgcattaaggttt 4124152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 24838855 - 24838724
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaag-aggaccaataaactcattgccttaaag-tttgggtaac 168  Q
    |||| ||||||||||| || |||| ||| || |||||||| ||||| |||||||||||||| |||| | |||||| | ||| ||||| | |||||||||     
T  24838855 gtgtaagttatatgtctcacatcgaataaaagagtaaagg-ttgaacaccttataagtaagaaggatccataaacccgttgtcttaaggttttgggtaag 24838757  T
Q  169 agtgcgacgtctttctctcttgtggggtagttc 201  Q
    |||| ||||||| |||  |||||| ||| ||||    
T  24838756 agtgtgacgtctctcttgcttgtgtggttgttc 24838724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 10074516 - 10074365
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||| | |||||| |||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| | ||||||||| |    
T  10074516 gtgtgagttagaggtcccacatcggatagaaaagtaaaggtt-gaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaaga 10074418  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||| || ||| ||| |||||| |||| |||||||| ||||    
T  10074417 gtgtggtgtctctctcactagtgtggttgttctagcctcgatgtggatagtcc 10074365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 3409264 - 3409407
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||| |||| || |||||||||| ||| |||||||||||||||||||| |||||||||||||||||| | ||||||||| |    
T  3409264 gtgtgagttatatgtcccacatcagataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaaga 3409362  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtg 214  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| |||||    
T  3409363 gtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtg 3409407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 29518508 - 29518659
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||| |||||| |||| |||||| | ||||||||| |    
T  29518508 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaaga 29518606  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  29518607 gtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 29518659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 29518925 - 29519076
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||| |||||| |||| |||||| | ||||||||| |    
T  29518925 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaaga 29519023  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  29519024 gtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 29519076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 32741184 - 32741335
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||| |||||| |||| |||||| | ||||||||| |    
T  32741184 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaaga 32741282  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  32741283 gtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 32741335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 220
Target Start/End: Complemental strand, 2579645 - 2579496
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||| | ||||||||||||  || | |||||||||||||||| || |||||||||||||||||| | ||||||||| |    
T  2579645 gtgtgagttatatgtcccacatcggacaaaaaagtaaaggtcggata-ccttataagtaagagggcccataaactcattgccttaaggttttgggtaaaa 2579547  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggt 220  Q
    ||  |  |||| |||  |||||| ||| ||||||||||| |||||||||||    
T  2579546 gtatggtgtctctcttgcttgtgtggttgttctaacctcgatgtggatggt 2579496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 2377759 - 2377910
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||||| || || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| | ||||||||| |    
T  2377759 gtgtgagttatatgtcccacatcggttaaaagagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 2377857  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  ||||||||  |||| | |||  ||||| |||| ||||||| |||||    
T  2377858 gtgtggtgtctttcttgcttgagtggtttttctagcctcgatgtggaaggtcc 2377910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 10074142 - 10074055
Alignment:
Q  73 gtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||| ||||| |||||||||||||||||| ||| ||| |||||||||||||||||||| |||||| ||||||||||| ||||    
T  10074142 gtgagttatatatcccacatcggatagaaaagtaaacgtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttt 10074055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 32460733 - 32460614
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||| ||| || |||||||||| ||| |||||||||||||||||||  |||||| ||||||||||| | ||||||||| |    
T  32460733 gtgtgagttatatgtcccacatcgtataaaatagtaaaggtt-gaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaaga 32460635  T
Q  170 gtgcgacgtctttctctcttg 190  Q
    ||| ||| |||||||| ||||    
T  32460634 gtgtgacatctttctcacttg 32460614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 2378131 - 2378220
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||| |||||| |||| |||||| ||||    
T  2378131 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggacccataaacccattaccttaaggttt 2378220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 216
Target Start/End: Original strand, 3058231 - 3058376
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||| |||||||||||||| |||||||| || |||||||| ||||| |||||||||||| ||||| | |||||| ||||||||||| | ||||||||| |    
T  3058231 gtgttagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtatgaggatccataaacccattgccttaaggttttgggtaaga 3058329  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    ||| |  |||| |||  ||||| |||| ||||||||||| |||||||    
T  3058330 gtgtggtgtctctcttgcttgtagggtggttctaacctcgatgtgga 3058376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 14748491 - 14748402
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||||| ||| ||||||||| |||||||||| ||||||||||||| |||| ||||    
T  14748491 gtgtgagttatatgtcccacatcggataaaatagtaaaggtt-gaacaccttataaataagaggacccataaactcattgcgttaaggttt 14748402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 9062501 - 9062402
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagtttgggtaacagt 171  Q
    |||||||||||||||||| |||||||| || |||||||||| ||| | |||||||||||||||||  |||||||||||| |||||  ||||||||| |||    
T  9062501 tgtgagttatatgtcccacatcggataaaatagtaaaggtt-gaacatcttataagtaagaggactcataaactcattgtcttaagttttgggtaaaagt 9062403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 10911570 - 10911660
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaa-gtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| | ||| |||| |||| ||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||    
T  10911570 gtgtgagttatatgtcctacatcagataaaaaaagtaaaggtt-gaacaccttataagtaagaggactcataaactcattgccttaaagttt 10911660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 222
Target Start/End: Original strand, 16454913 - 16455063
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacag 170  Q
    |||||||||| ||||||| ||| |||| || |||||||||| ||| ||||||||||||| |||||| ||||||  |||||||||| | ||||||||| ||    
T  16454913 tgtgagttatgtgtcccacatcagataaaagagtaaaggtt-gaacaccttataagtaataggacccataaacctattgccttaaggttttgggtaagag 16455011  T
Q  171 tgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    || | ||||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  16455012 tgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 16455063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 10073767 - 10073617
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    |||| |||||||||||||| ||||||  |||||||||||||| ||| |||||||||||||||||| | |||||||||||| ||||| | ||||||||| |    
T  10073767 gtgttagttatatgtcccacatcgga--gaaaagtaaaggtt-gaacaccttataagtaagaggatccataaactcattggcttaagattttgggtaaga 10073671  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcct 223  Q
    ||| |  |||| |||| || ||| ||| |||||| | || ||||||| ||||||    
T  10073670 gtgtggtgtctctctcactagtgtggttgttctagcatcgatgtggacggtcct 10073617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 35210209 - 35210298
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||| || |||||||| || |||||||||| ||| |||||||||||||||||||| |||||  ||||||||||| ||||    
T  35210209 gtgtgagttatatgtctcacatcggataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaaaccattgccttaaggttt 35210298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 2580025 - 2579874
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| || ||||||||||||||||| |||||| ||  ||||||| | ||||||||| |    
T  2580025 gtgtgagttatatgtcccacatcggataaaagagtaaagg-ttgaacacattataagtaagaggacccataaacccacagccttaaggttttgggtaaga 2579927  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
     || |  |||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  2579926 atgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggaaggtcc 2579874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 16454580 - 16454731
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    ||||||||||| ||||||| ||| |||| || | |||| ||| ||| |||||||||||||||||||| |||||| ||||||||||| | ||||| ||| |    
T  16454580 gtgtgagttatgtgtcccacatcagataaaagaataaaagtt-gaacaccttataagtaagaggacccataaacccattgccttaagattttggataaga 16454678  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| | ||||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  16454679 gtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 16454731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 26544054 - 26544197
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| || ||||||||||||||||| |||||| ||  ||||||| | |||| |||| |    
T  26544054 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacacgttataagtaagaggacccataaacccaccgccttaaggttttgagtaaga 26544152  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtg 214  Q
    ||| || |||| |||  |||||| | | |||||| ||||||||||    
T  26544153 gtgtgatgtctctcttgcttgtgcgattgttctagcctcaatgtg 26544197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 222
Target Start/End: Original strand, 1127366 - 1127516
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacag 170  Q
    |||||||||||| ||||| ||||| || || |||||||||| ||| |||||||||||||||||||  |||||| |||| |||||| | ||||||||| ||    
T  1127366 tgtgagttatatatcccacatcgggtaaaatagtaaaggtt-gaacaccttataagtaagaggactcataaacccattaccttaaggttttgggtaagag 1127464  T
Q  171 tgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    || | ||||| |||  ||| || ||| | ||||||||| |||||| ||||||    
T  1127465 tgtggcgtctctcttacttatgtggttgctctaacctcgatgtgggtggtcc 1127516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 3415463 - 3415552
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||  ||| || |||||||||| ||| ||| |||||||||||||||| |||||| ||||||||||| ||||    
T  3415463 gtgtgagttatatgtcccacatcacataaaatagtaaaggtt-gaacaccatataagtaagaggacccataaacccattgccttaaggttt 3415552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 6999949 - 6999860
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| | |||||||| ||||||||| | ||||| |||||||| ||||||||| | ||||||||| |||||||| ||||    
T  6999949 gtgtgagttatatgtcctacatcggataaaaaagtaaaag-ttgaacaccttatatgtaagaggatccataaactcactgccttaaggttt 6999860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 16107683 - 16107772
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||  || |||||||| |||||||||||||  || |||||||||||||||||||  |||||| ||||||||||| ||||    
T  16107683 gtgtgagttatatgtgtcacatcggataaaaaagtaaaggtta-aacaccttataagtaagaggactcataaacccattgccttaaggttt 16107772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 16108068 - 16108152
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    ||||||||||||||| ||| ||| |||| || |||||| ||| ||| |||||||||||||||||||| |||||| |||||||||||    
T  16108068 gtgtgagttatatgttccacatcagataaaagagtaaatgtt-gaacaccttataagtaagaggacccataaacccattgccttaa 16108152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 2578595 - 2578445
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| | |||||| || |||||||||| ||| || ||||||||||||||||| |||||| ||| ||||||| | ||||||||| |    
T  2578595 gtgtgagttatatgtcccaca-cggataaaagagtaaaggtt-gaacactttataagtaagaggacccataaacccatagccttaaggttttgggtaaga 2578498  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| | |  |||||| ||| |||||| |||| ||||||| |||||    
T  2578497 gtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtcc 2578445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 593862 - 593773
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||| ||||||||| |||||||| || |||||||||| ||| |||||||||||||||||||  ||||||  | |||||||| ||||    
T  593862 gtgtgagttgtatgtcccacatcggataaaagagtaaaggtt-gaacaccttataagtaagaggactcataaaccgactgccttaaggttt 593773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 1950338 - 1950201
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||| ||||||||||| | |||||   | |||||||| | |||| |||| |    
T  1950338 gtgtgagttatatgtcccacatcggataaaagagtaaagg-ttgaacaccttacaagtaagaggagccataaatctaatgccttaaggttttgagtaaga 1950240  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctc 208  Q
    ||| ||||||| |||  |||||| ||| |||||| ||||    
T  1950239 gtgtgacgtctctcttacttgtgcggttgttctagcctc 1950201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 2578987 - 2578837
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||| |||||||||||  |||||||| ||||||||| ||| ||| ||||||||| |||||||| | ||||||||||| |||||| | ||||||||| |    
T  2578987 gtgtgatttatatgtccctcatcggata-aaaagtaaatgtt-gaataccttataaataagaggatccataaactcattaccttaaggttttgggtaaga 2578890  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| | |  |||||| ||| ||||| ||||| ||||||| |||||    
T  2578889 gtgtggtgtctcttttgcttgtgtggttgttctgacctcgatgtggacggtcc 2578837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 3409665 - 3409816
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcc-ttaaagtttgggtaaca 169  Q
    ||||||||||||||| ||| ||| |||| || |||||| ||| ||| | |||||||||||||||||| |||||| ||||||| |||   ||||||||| |    
T  3409665 gtgtgagttatatgtaccacatcagataaaatagtaaaagtt-gaacatcttataagtaagaggacccataaacccattgcctttattttttgggtaaga 3409763  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  3409764 gtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 3409816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 5832179 - 5832108
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaa 143  Q
    |||| |||||||||||||| || ||||| || |||||||||| ||| |||||||||||||||||||| |||||    
T  5832179 gtgtaagttatatgtcccacattggataaaagagtaaaggtt-gaacaccttataagtaagaggacccataaa 5832108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 17135222 - 17135144
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattg 150  Q
    |||||||||||||||| || |||||||||| ||||||| |||| || |||||||||| |||||||   ||||||||||||    
T  17135222 gtgtgagttatatgtctcacatcggatagagaagtaaatgttt-aataccttataagcaagaggattcataaactcattg 17135144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 1846753 - 1846842
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||| || |||||| || |||||||| || |||||||||| ||| |||||||||||||||| ||| |||||  ||||||||||| ||||    
T  1846753 gtgtgaattctatgtctcacatcggataaaatagtaaaggtt-gaacaccttataagtaagagcacccataaatccattgccttaaggttt 1846842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 161
Target Start/End: Original strand, 2843560 - 2843649
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagagga-ccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||  || |||||||| || | |||| ||| ||| |||||||||||||||||| || |||||||||||||||||| ||||    
T  2843560 tgtgagttatatgtttcacatcggataaaataataaaagtt-gaacaccttataagtaagaggaccccataaactcattgccttaaggttt 2843649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 5958755 - 5958667
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||   | |||||||| || |||||||||| ||| ||||||||| |||||| ||  |||||||||||| ||||||||||    
T  5958755 tgtgagttatatgtgttacatcggataaaacagtaaaggtt-gaacaccttataaataagagaactcataaactcattgtcttaaagttt 5958667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 6071137 - 6071221
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    ||||||||||||||||||| || | ||||||||||  ||| ||||| || |||||||| ||| || | ||||||||||||||||||    
T  6071137 gtgtgagttatatgtcccacattgaatagaaaagtggagg-ttgaacactttataagtgagatgatccataaactcattgccttaa 6071221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 12092629 - 12092546
Alignment:
Q  77 gttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||| |||||||| |||||||||||||||  ||||| ||  || |||||||| |||||| | |||||||||||||||||| ||||    
T  12092629 gttagatgtcccacatcggatagaaaagtggaggtt-gagcactttataagtgagaggatccataaactcattgccttaaggttt 12092546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 36629242 - 36629393
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||||||||||||| |||  || |||||||||||||||||||| |||||||||||||||||| | ||||||||| |    
T  36629242 gtgtgagttatatgtcccacatcggatagaaaagtaaaagtta-aacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaaga 36629340  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  36629341 gtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 36629393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 49076599 - 49076504
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagtttgggtaa 167  Q
    ||||||||||||||| |||||||||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  49076599 gtgtgagttatatgtaccatatcggataaaacagtaaaggtt-gaacaccttataagtaagaggacctataaacccattgtcttaaagtttgggtaa 49076504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 3244602 - 3244513
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||| || |||||||||||||||||||||| ||| | |||||||||||||||||| |||||||||||| ||||||||||    
T  3244602 gtgtgagttatatgtctcacatcggatagaaaagtaaaggtt-gaacatcttataagtaagaggacccataaactcattgtcttaaagttt 3244513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 41370362 - 41370451
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||| ||| |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  41370362 gtgtgagttatatgtcccaaatcggataaaatagtaaatgtt-gaaaaccttataagtaagaggacccataaacccattgccttaaagttt 41370451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 16888967 - 16888884
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcctta 155  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| |||||||||||| ||||    
T  16888967 gtgtgagttatatgtcccacatcggatagaaaagtaaagg-ttgaataccttataagtaagagaacctataaactcattgtctta 16888884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 39793011 - 39792858
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||| |||||||||||||| | ||||| |||||||||| ||||||| |  ||||||||||||||||| | ||||||||| |    
T  39793011 gtgtgagttatatgtcccacatcagatagaaaagtaaatg-ttgaacaccttataagaaagaggaaccgtaaactcattgccttaaggttttgggtaaga 39792913  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctc 224  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||| |||||||    
T  39792912 gtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcctc 39792858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 2740705 - 2740794
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||| ||  ||||||| ||||    
T  2740705 gtgtgagttatatgtcccacatcggatagaacagtaaagg-ttgaacaccttataagtaagaggacctataaacccagagccttaaggttt 2740794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 32941274 - 32941129
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||  | |||||| |||| |||||||||| ||| ||||||||| ||||||| |  |||||||||||||||||| | ||||||||| |    
T  32941274 gtgtgagttatatgtcttacatcggaaagaacagtaaaggtt-gaacaccttataaataagagggctcataaactcattgccttaaggttttgggtaaga 32941176  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    ||| ||||||| |||  |||||| ||| |||||| |||| |||||||    
T  32941175 gtgtgacgtctctcttgcttgtgcggttgttctagcctcgatgtgga 32941129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 52884892 - 52884981
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||| | |||||| ||||||||||| ||||    
T  52884892 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggatccataaacccattgccttaaggttt 52884981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 55933275 - 55933186
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| | |||||||| || ||||| |||| ||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  55933275 gtgtgagttatatgtcctacatcggataaaatagtaagggtt-gaacaccttataagtaagaggacccataaacccattgccttaaagttt 55933186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 16889687 - 16889536
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || |||||||||||||||||||| ||||| ||||||||||||||||||   ||||||  | |||||||||| ||||||||| |    
T  16889687 gtgtgagttatatgtctcaaatcggatagaaaagtaaagg-ttgaataccttataagtaagaggattcataaacctactgccttaaagttttgggtaaga 16889589  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||  |  |||| |||  |||||| | | ||||||||||| ||||||| |||||    
T  16889588 gtatggtgtctctcttccttgtgtgattgttctaacctcgatgtggacggtcc 16889536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 3340812 - 3340962
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||  ||| |||  || |||||||||| ||  |||||||||||||||||||| |||||| || |||||||| | ||||||||| |    
T  3340812 gtgtgagttatatgtcccgcatcagatgaaagagtaaaggtt-gagcaccttataagtaagaggacccataaacccactgccttaaggttttgggtaaga 3340910  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtc 221  Q
    ||| |  ||||||||  |||||||||| |||||| |||| ||||||| ||||    
T  3340911 gtgtggtgtctttcttgcttgtggggttgttctagcctcgatgtggacggtc 3340962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 25483341 - 25483491
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || |||||||| || |||||||| ||||| | |||||||||||||||| | |||||| ||||||||||| | ||||||||| |    
T  25483341 gtgtgagttatatgtctcacatcggataaaatagtaaagg-ttgaacatcttataagtaagaggatccataaacccattgccttaaggttttgggtaaga 25483439  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtc 221  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||| ||||    
T  25483440 gtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtc 25483491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 54108928 - 54109018
Alignment:
Q  81 tatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagtttgggtaacagtg 172  Q
    ||||||||| |||||||| || |||||||||| ||| |||||||||||||||||||| |||||| |||||||||||  ||||||||| ||||    
T  54108928 tatgtcccacatcggataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaagttttgggtaagagtg 54109018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 2741076 - 2741165
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| ||| ||||||| |||||||| ||||| |||||||||||||||||||| ||||   ||||||||||| ||||    
T  2741076 gtgtgagttatatgtcccacatcagatagaatagtaaagg-ttgaataccttataagtaagaggacccataactccattgccttaaggttt 2741165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 4955468 - 4955379
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||| ||||||||||| || ||| |||||| ||| |||||||||||||||||||  |||||| ||||||||||| ||||    
T  4955468 gtgtgagttatatgtctcatatcggataaaatagttaaggtt-gaacaccttataagtaagaggactcataaacccattgccttaaggttt 4955379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 34646800 - 34646711
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||| ||| ||| ||||||||| |||||||||  |||||||||||||||||| ||||    
T  34646800 gtgtgagttatatgtcccacatcggataaaacagtaaatgtt-gaacaccttataactaagaggactcataaactcattgccttaaggttt 34646711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 51768210 - 51768061
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacag 170  Q
    |||||||||||||||| |||||| ||| || |||||| ||| ||| ||||||||| |||||||||  |||||||||||| ||||| | ||||||||| ||    
T  51768210 tgtgagttatatgtcctatatcgaatataagagtaaatgtt-gaacaccttataaataagaggactcataaactcattgtcttaaggttttgggtaaaag 51768112  T
Q  171 tgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtc 221  Q
    | ||| |||| |||  ||| |||| | ||||||||||| ||||||| ||||    
T  51768111 tacgatgtctctcttacttatgggattgttctaacctcgatgtggacggtc 51768061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 52884700 - 52884789
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| ||||||||||||||| || | |||||| ||||||||||| ||||    
T  52884700 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagatgatcgataaacccattgccttaaggttt 52884789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 760194 - 760278
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    ||||||||||||||||||| |||| |||||||| | |||||| || ||| |||||||| |||||||| ||||||||||||||||||    
T  760194 gtgtgagttatatgtcccacatcgaatagaaaaatgaaggtt-gagaactttataagtgagaggacccataaactcattgccttaa 760278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 41707615 - 41707515
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagtttgggtaacag 170  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| ||| ||||||||| || ||| |||||||||||| ||||| |||| ||||| ||    
T  41707615 gtgtgagttatatgtcccacatcggataaaagagtaaagg-ttgaacaccatataagtaaaagaacccataaactcattgtcttaaggttttggtaagag 41707517  T
Q  171 tg 172  Q
    ||    
T  41707516 tg 41707515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 50630904 - 50630817
Alignment:
Q  73 gtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||| | |||||||| || |||||||||| ||| || ||||||||||||||||| |||||| ||||||||||| ||||    
T  50630904 gtgagttatatgtcctacatcggataaaatagtaaaggtt-gaacacattataagtaagaggacccataaacccattgccttaaggttt 50630817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 222
Target Start/End: Complemental strand, 1731797 - 1731647
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacag 170  Q
    |||||||||||||||||| ||| |||| || |||||||| ||||| | ||||||| |||||||||| ||||||  |||||||||| | ||||||||| ||    
T  1731797 tgtgagttatatgtcccacatcagataaaacagtaaagg-ttgaacatcttataaataagaggacccataaaccaattgccttaaggttttgggtaagag 1731699  T
Q  171 tgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    || |  || | |||  |||||| ||| |||||| |||||||||||| |||||    
T  1731698 tgtggtgtttctcttgcttgtgtggttgttctagcctcaatgtggacggtcc 1731647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 54017746 - 54017596
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||||||  || |||| || |||||||||| ||| | |||||||||||||||||| |||||| ||||||||||| | ||| ||||| |    
T  54017746 gtgtgagttatatgtcccacgtcagataaaatagtaaaggtt-gaacatcttataagtaagaggacccataaacccattgccttaaggttttaggtaaga 54017648  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtc 221  Q
    ||| || |||| |||  ||| || ||| |||||| |||| ||||||| ||||    
T  54017647 gtgtgatgtctctcttgcttatgtggttgttctagcctcgatgtggacggtc 54017596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 22183415 - 22183254
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||| ||||| |||||||| || |||||| ||| ||| |  |||||||||| |||||| |||||| ||||||||||| | ||||| ||| |    
T  22183415 gtgtgagttatatatcccacatcggataaaagagtaaatgtt-gaacaatttataagtaaaaggacccataaacccattgccttaaggttttggataaga 22183317  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
    ||| | ||||| |||| |||||  ||| |||||| |||| ||||||| ||||| || ||||||    
T  22183316 gtgtggcgtctctctcacttgtacggttgttctagcctcgatgtggacggtcccccagactcc 22183254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 49880165 - 49880254
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| || | ||| || |||||||||| ||| |||||||||||||||||||| |||||| || |||||||| ||||    
T  49880165 gtgtgagttatatgtcccacattgaataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaacccactgccttaaggttt 49880254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 54741329 - 54741264
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggacc 137  Q
    |||||| ||||||||| || |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  54741329 gtgtgaattatatgtctcacatcggatagaaaagtaaagg-ttgaacaccttataagtaagaggacc 54741264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 222
Target Start/End: Complemental strand, 22028515 - 22028369
Alignment:
Q  78 ttatatgtcccatatcggatagaaaag--taaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcg 174  Q
    |||||||||| | |||||||| ||||   |||||||| ||| ||||||| |||||||||||| |||||||||||| ||||| | ||||||||| |||| |    
T  22028515 ttatatgtcctacatcggataaaaaaaaataaaggtt-gaacaccttattagtaagaggacccataaactcattgtcttaatgttttgggtaagagtgtg 22028417  T
Q  175 acgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
      |||| |||  |||||| ||| |||||| |||||||||||| |||||    
T  22028416 gtgtctctcttgcttgtgaggttgttctagcctcaatgtggacggtcc 22028369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 39404023 - 39404174
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||| | || | ||| || |||||||||| ||| || ||||||||||||||||  |||||||||| || |||| | ||||||||| |    
T  39404023 gtgtgagttatatgtcctacattgaataaaagagtaaaggtt-gaacactttataagtaagaggactcataaactcatagcattaaggttttgggtaaga 39404121  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| | ||||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  39404122 gtgtggcgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 39404174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 222
Target Start/End: Original strand, 44620362 - 44620509
Alignment:
Q  75 gagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgc 173  Q
    ||||||||||| ||| |||||||| || |||||||| ||||| ||||||||| ||||||  || |||||| ||||||||||| | ||||||||| ||||     
T  44620362 gagttatatgttccacatcggataaaacagtaaagg-ttgaacaccttataaataagagagcccataaacccattgccttaaggttttgggtaagagtgt 44620460  T
Q  174 gacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    || || | |||  |||||| ||| ||||||||||  ||||||| |||||    
T  44620461 gatgtttctcttgcttgtgtggttgttctaaccttgatgtggacggtcc 44620509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 45496820 - 45496899
Alignment:
Q  81 tatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||| |||||||| ||  ||||||||| ||| |||||||||||||||||||| |||||||||||| ||||| ||||    
T  45496820 tatgtcccacatcggataaaatcgtaaaggtt-gaacaccttataagtaagaggacctataaactcattgtcttaaggttt 45496899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 10245925 - 10245991
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggacca 138  Q
    |||||||||||||| |||| |||||||| || |||||||| ||||| |||||||||||||||||||||    
T  10245925 gtgtgagttatatgccccacatcggataaaagagtaaagg-ttgaacaccttataagtaagaggacca 10245991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 43827492 - 43827595
Alignment:
Q  119 ccttataagtaagaggaccaataaactcattgccttaaagtttgggtaacagtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatg 218  Q
    |||||||| |||||||||| ||||| |||||||||||| |||||| ||| |||| |  |||| |||  |||||| ||| ||||||||||| ||||||| |    
T  43827492 ccttataaataagaggacccataaattcattgccttaaggtttggataagagtgtggtgtctctcttacttgtgcggttgttctaacctcgatgtggacg 43827591  T
Q  219 gtcc 222  Q
    ||||    
T  43827592 gtcc 43827595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 22028112 - 22028023
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||| |||||||||||| |||||||| || |  ||||||| ||| |||||||||||||||||||| ||||||  |||||||||| ||||    
T  22028112 gtgtgacttatatgtcccacatcggataaaatacgaaaggtt-gaacaccttataagtaagaggacccataaacatattgccttaaggttt 22028023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 31691202 - 31691272
Alignment:
Q  117 aaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcgacgtctttctct 186  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||| | ||||| |||||    
T  31691202 aaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggcgtctatctct 31691272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 36572024 - 36572113
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||| ||| || |||||| ||| ||| ||||||||||||||| |||| |||||  ||||||||||| ||||    
T  36572024 gtgtgagttatatgtcccacatcgaataaaagagtaaatgtt-gaacaccttataagtaagaagacccataaatccattgccttaaggttt 36572113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 39404403 - 39404492
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| ||| |||| || |||||||| | ||| |||||||||||||||||||| ||||||  || ||||||| ||||    
T  39404403 gtgtgagttatatgtcccacatcagataaaagagtaaagg-tggaacaccttataagtaagaggacccataaacctatagccttaaggttt 39404492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 49302909 - 49303000
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttat--aagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||  ||| ||||||||||| ||||| | |||||  ||||||||||||| |||||| ||||||||||| ||||    
T  49302909 gtgtgagttatatgtcccacatcaaataaaaaagtaaagg-ttgaacatcttataaaagtaagaggacccataaacccattgccttaaggttt 49303000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 215
Target Start/End: Original strand, 50002431 - 50002575
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || |||||||| || |||||||| ||||| || || |||||||||||||| |||||  ||||| ||||| | ||||||||| |    
T  50002431 gtgtgagttatatgtctcacatcggataaaagagtaaagg-ttgaacactttttaagtaagaggacccataaatccattgtcttaaggttttgggtaaga 50002529  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgg 215  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||    
T  50002530 gtgtggtgtctctcttacttgtgcggttgttctagcctcgatgtgg 50002575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 54343147 - 54343087
Alignment:
Q  76 agttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggacc 137  Q
    |||||||||||||| |||||||| || |||||||| ||||| ||||||||||||||||||||    
T  54343147 agttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggacc 54343087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 20826223 - 20826306
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    |||||||||||||||||| |||||||| || |||||| | ||||| || ||||||||||||| ||| |||||| ||| |||||||    
T  20826223 tgtgagttatatgtcccacatcggataaaatagtaaaag-ttgaacacgttataagtaagagaacccataaacccatagccttaa 20826306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 36608812 - 36608661
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||| | |||||||| || |||||| | ||||| |||| ||||||||||||| | |||||  ||||| ||||| | ||||||||| |    
T  36608812 gtgtgagttatatgtccaacatcggataaaagagtaaaag-ttgaacacctcataagtaagaggatccataaatccattgtcttaaggttttgggtaaga 36608714  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||| || ||| ||| |||||| |||| ||||||| |||||    
T  36608713 gtgtggtgtctctctcactagtgtggttgttctagcctcgatgtggacggtcc 36608661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 54108551 - 54108686
Alignment:
Q  81 tatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaat-aaactcattgccttaaag-tttgggtaacagtgcgacgt 178  Q
    |||||||||||| ||||| || |||||||| ||||| ||||||||||||| |||||| || ||| |||||||||||| | ||||| ||| |||| |  ||    
T  54108551 tatgtcccatataggataaaatagtaaagg-ttgaacaccttataagtaaaaggacccataaaattcattgccttaaggttttggctaagagtgtggtgt 54108649  T
Q  179 ctttctctcttgtggggtagttctaacctcaatgtgg 215  Q
    || |||  |||||| ||| |||||| |||||||||||    
T  54108650 ctatcttgcttgtgtggttgttctagcctcaatgtgg 54108686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 3341133 - 3341246
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    ||||||||||||||||||| || ||||| || |||||||| || || || ||||||||||||||||| ||||  ||||||  |||| | ||||||||| |    
T  3341133 gtgtgagttatatgtcccacattggataaaagagtaaagg-ttaaacactttataagtaagaggacccataacatcattgttttaagattttgggtaaga 3341231  T
Q  170 gtgcgacgtctttct 184  Q
    ||| || ||||||||    
T  3341232 gtgtgatgtctttct 3341246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 18932880 - 18932811
Alignment:
Q  91 atcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||| || |||||||||| ||| ||||||||| |||||||||| |||||| ||||||||||| ||||    
T  18932880 atcggataaaatagtaaaggtt-gaataccttataaataagaggacccataaacccattgccttaaggttt 18932811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 44621011 - 44621096
Alignment:
Q  75 gagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||| |||| |||| |||||||| || |||||||||| ||| ||||||||||||||||| |  |||||||||||| ||||| ||||    
T  44621011 gagttgtatgacccacatcggataaaacagtaaaggtt-gaacaccttataagtaagagggcacataaactcattgtcttaaggttt 44621096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 44620665 - 44620737
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    ||||||||||||||||||| |||||||  || |||| ||| ||||| || ||||||||||||||||| ||||||    
T  44620665 gtgtgagttatatgtcccacatcggatgaaatagtagagg-ttgaacactttataagtaagaggacccataaac 44620737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 20825842 - 20825913
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    |||||||||||||| ||| |||||||| || |||||||| ||||| ||||||||| |||||| ||| ||||||    
T  20825842 tgtgagttatatgttccacatcggataaaagagtaaagg-ttgaacaccttataaataagagcacccataaac 20825913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 214
Target Start/End: Complemental strand, 34004734 - 34004593
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || ||  |||| |||| |||||||| ||| | |||||||||||||||||| ||||||||||| |||||| | ||| | ||| |    
T  34004734 gtgtgagttatatgtcacacatatgata-aaaactaaaggtt-gaacaacttataagtaagaggacccataaactcatt-ccttaaggttttcgataaga 34004638  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtg 214  Q
    ||| | ||||| |||| |||||| ||| |||||| |||| |||||    
T  34004637 gtgtgccgtctctctcccttgtgcggttgttctagcctcgatgtg 34004593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 54936215 - 54936290
Alignment:
Q  85 tcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||| ||| |||| || |||||||||| ||| ||||| |||||||||||||| |||||| ||||||||||| ||||    
T  54936215 tcccacatcagataaaatagtaaaggtt-gaacaccttgtaagtaagaggacccataaacccattgccttaaggttt 54936290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 44620304 - 44620362
Alignment:
Q  74 tgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagag 133  Q
    |||||||||||||||| || ||||| || |||||||| ||||| ||||||||||||||||    
T  44620304 tgagttatatgtcccacatgggataaaatagtaaagg-ttgaacaccttataagtaagag 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 28034234 - 28034323
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||| |||||||||||  |||||||||||||||  ||| ||||| || |||||||| |||| ||| ||||||| ||||| |||| ||||    
T  28034234 gtgtgaattatatgtcccgcatcggatagaaaagtggagg-ttgaacactttataagtgagagaacccataaacttattgctttaaggttt 28034323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 49076981 - 49076837
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||| |||||| || || || |||||||| ||||| ||||||| |||||||| ||| |||||| |||  |||||| | ||||||| | |    
T  49076981 gtgtgagttatatgttccatattggctaaaatagtaaagg-ttgaacaccttat-agtaagagaacccataaacccataaccttaaggttttgggttaga 49076884  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    ||| |  ||||||||  |||||| ||| |||||| |||| |||||||    
T  49076883 gtgtggtgtctttcttgcttgtgcggttgttctagcctcgatgtgga 49076837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 50459726 - 50459803
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcatt 149  Q
    ||||||||||||||| ||| ||||| || || |||||||| ||||| | |||||||||||||||||  |||||| ||||    
T  50459726 gtgtgagttatatgttccacatcggttaaaagagtaaagg-ttgaacatcttataagtaagaggactcataaacccatt 50459803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 54017845 - 54017788
Alignment:
Q  79 tatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggacc 137  Q
    ||||| ||||| |||||||| || |||||||||| ||| ||||||||||||||||||||    
T  54017845 tatatatcccacatcggataaaacagtaaaggtt-gaacaccttataagtaagaggacc 54017788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 3700370 - 3700434
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggac 136  Q
    ||||||||||||||||| | |||||||| || |||||| | ||||| ||||||||||||| |||||    
T  3700370 gtgtgagttatatgtcctacatcggataaaagagtaaatg-ttgaacaccttataagtaaaaggac 3700434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 4390252 - 4390189
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagagga 135  Q
    |||||||||| || ||||| ||| |||| || |||||||||| ||| ||||||||||||||||||    
T  4390252 gtgtgagttacatatcccacatcagataaaagagtaaaggtt-gaacaccttataagtaagagga 4390189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 6975606 - 6975543
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggac 136  Q
    ||||||||||||||| || ||| |||| || |||||||| ||||| | |||||||||||||||||    
T  6975606 tgtgagttatatgtctcacatccgataaaatagtaaagg-ttgaatatcttataagtaagaggac 6975543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 42514654 - 42514805
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    ||||||||||||||||| | ||| |||||||||||||||| ||||| |||||||||||||||||||| |||||| ||| ||||||| | ||||||||| |    
T  42514654 gtgtgagttatatgtcctacatcagatagaaaagtaaagg-ttgaacaccttataagtaagaggacccataaacccatcgccttaagattttgggtaaga 42514752  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| | ||||| |||  |||||||||| |||||| |||| ||||||| |||||    
T  42514753 gtgtggcgtctctcttacttgtggggttgttctagcctcgatgtggacggtcc 42514805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 203
Target Start/End: Complemental strand, 28254390 - 28254260
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||| |||||||||||| |||||||||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||| | ||||||||| |    
T  28254390 gtgtgacttatatgtcccacatcggatagaaaagtaaaggtt-gaacatcttataagtaagaggacccataaactcattgccttaaggttttgggtaaga 28254292  T
Q  170 gtgcgacgtctttctctcttgtggggtagttcta 203  Q
    ||| |  || | ||||||||||||||| ||||||    
T  28254291 gtgtg--gtgtctctctcttgtggggttgttcta 28254260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 36006032 - 36005888
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||| ||||||| ||||| ||| ||| |||||||||||||||||||| |||||||||||||||||| | ||||||||| |    
T  36006032 gtgtgagttatatgtcccacatcgaatagaaa-gtaaaagtt-gaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaaaa 36005935  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    ||| | ||||| |||  |||||||||| |||||| |||| |||||||    
T  36005934 gtgtggcgtctctcttgcttgtggggttgttctagcctcgatgtgga 36005888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 40679781 - 40679632
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaacag 170  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||| ||| |||||| ||| ||||||| | ||||||||| ||    
T  40679781 tgtgagttatatgtcccatatcggatagaaaagt-aagggttgaacaccttataagtaagagaacccataaacccatcgccttaagattttgggtaagag 40679683  T
Q  171 tgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtc 221  Q
    || | ||||| |||  |||||||||| ||||||  ||| ||||||| ||||    
T  40679682 tgtggcgtctctcttacttgtggggttgttctagtctcgatgtggacggtc 40679632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 41283628 - 41283539
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||||||||||||| || |||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  41283628 gtgtgagttatatgtcccatatcggataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaactcattgccttaaggttt 41283539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 28531467 - 28531366
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| | ||||||||| |    
T  28531467 gtgtgagttatatgtcccacatcggatagaaaagcaaagg-ttgaacaccttataagtaagaggtcccataaactcattgccttaagattttgggtaaga 28531369  T
Q  170 gtg 172  Q
    |||    
T  28531368 gtg 28531366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 35580876 - 35580716
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || | |||| | ||||| ||||||||||| |||||||| |||||| ||||||||||| | ||||||||| |    
T  35580876 gtgtgagttatatgtcccacatcggataaaacaataaatg-ttgaacaccttataagtgagaggacc-ataaacccattgccttaaggttttgggtaaga 35580779  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
    ||||| ||||| |||   ||||||||| |||||| |||| ||||||| ||||| |||||||||    
T  35580778 gtgcggcgtctctcttgtttgtggggttgttctagcctcgatgtggacggtccccctgactcc 35580716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 36178758 - 36178613
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| | ||||||||| |    
T  36178758 gtgtgagttatatgtcccacatcggataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 36178660  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| |||||||    
T  36178659 gtgtggtgtctctcttgcttgtgtggttgttctagcctctatgtgga 36178613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 962603 - 962753
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||| |||||| ||||| ||||| | ||||||||| |    
T  962603 gtgtgagttatatgtcccacatcggatagaaaagtaaagg-ttgaacaccttataagtgagaggacccataaacccattgtcttaaggttttgggtaaga 962701  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtc 221  Q
    ||| |  |||  |||  |||||| ||| |||||| |||| ||||||| ||||    
T  962702 gtgtgttgtcactcttgcttgtgtggttgttctagcctcgatgtggacggtc 962753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 71 - 225
Target Start/End: Original strand, 15880268 - 15880422
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||| ||| |||||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| | ||||||||| |    
T  15880268 gtgtgagttatatgttccacatcggataaaagagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 15880366  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcc 225  Q
    ||| | ||||| |||  |||||| ||| ||| || |||| ||||||| | ||||||    
T  15880367 gtgtggcgtctctcttgcttgtgcggttgttttagcctcgatgtggacgttcctcc 15880422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 6421390 - 6421541
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||||| ||| |||||||||||||||||||  |||||||||||||||| | | ||||||||| |    
T  6421390 gtgtgagttatatgtcccacatcggataaaagagtaaaggtt-gaacaccttataagtaagaggactcataaactcattgccttgaggttttgggtaaga 6421488  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| ||| ||||||  ||| ||||||| |||||    
T  6421489 gtgtggtgtctctcttgcttgtgcggttgttctagtctcgatgtggacggtcc 6421541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 37105929 - 37106080
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    ||||||||||||||||||| |||| ||| || |||||||||| ||| |||||||||||||| ||||| |||||||||||||||||| | ||||||||| |    
T  37105929 gtgtgagttatatgtcccacatcgaataaaatagtaaaggtt-gaacaccttataagtaaggggacccataaactcattgccttaagattttgggtaaga 37106027  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||  ||| |||||| |||| ||||||| |||||    
T  37106028 gtgtggtgtctctcttgcttgtacggttgttctagcctcgatgtggacggtcc 37106080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 225
Target Start/End: Original strand, 37106193 - 37106347
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||| |||||| |||| |||||| | ||||||||| |    
T  37106193 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggacccataaacccatttccttaaggttttgggtaaga 37106291  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcc 225  Q
    ||| |  || | |||  |||||| | | |||||| |||| ||||||| ||||||||    
T  37106292 gtgtggtgtttctcttgcttgtgcgattgttctagcctcgatgtggacggtcctcc 37106347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 5542778 - 5542689
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||||||||| ||| || |||||||||| ||| |||||||||||||||||||| ||||||  |||||||||| ||||    
T  5542778 gtgtgagttatatgtcccatatcgaataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaacctattgccttaaggttt 5542689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 14745820 - 14745731
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| || ||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| ||||    
T  14745820 gtgtgagttatatgtcccacattggataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttt 14745731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 31899579 - 31899496
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcctta 155  Q
    ||||||||||||||| ||| |||||||| || |||||| ||| ||| |||||||||||||||||||| |||||||||||||||||    
T  31899579 gtgtgagttatatgttccacatcggataaaatagtaaatgtt-gaacaccttataagtaagaggacccataaactcattgcctta 31899496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 40733522 - 40733673
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||| |||| ||||||||| | ||||| |||||||||||||||||||| ||||||  |   |||||||| ||||||||| |    
T  40733522 gtgtgagttatatgtcccacatcagataaaaaagtaaatg-ttgaacaccttataagtaagaggacccataaacctacaaccttaaagttttgggtaaga 40733620  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||| |||||| |||||||| |  ||| |||||||||||||    
T  40733621 gtgtggtgtctctctcgcttgtgtggtagttcaagtctcgatgtggatggtcc 40733673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 16542454 - 16542538
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    |||||||||||| |||||| |||||||| || |||||||||| ||| ||||||||| |||||||||  ||||||||||||||||||    
T  16542454 gtgtgagttataagtcccacatcggataaaatagtaaaggtt-gaacaccttataaataagaggacttataaactcattgccttaa 16542538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 7598614 - 7598684
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataa 142  Q
    ||||||||||||||||||| ||| |||| ||||||||||| ||||| |||||||||||||||||||| ||||    
T  7598614 gtgtgagttatatgtcccacatcagataaaaaagtaaagg-ttgaacaccttataagtaagaggacccataa 7598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 221
Target Start/End: Complemental strand, 40163520 - 40163375
Alignment:
Q  77 gttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag--tttgggtaacagtgcg 174  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| |||| || |||  | || ||| |||  ||||||||| |||| |    
T  40163520 gttatatgtcccacatcggatagaaaagtaaagg-ttgaacaccttataagtaagatgacccattaacctagtgtctttaaggttttgggtaaaagtgtg 40163422  T
Q  175 acgtctttctctcttgtggggtagttctaacctcaatgtggatggtc 221  Q
      |||| |||  |||||| ||| ||||||||||| |||| |||||||    
T  40163421 gtgtctctcttgcttgtgtggttgttctaacctcgatgtagatggtc 40163375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 5543151 - 5543050
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    ||||||||||||||||||| ||| |||| || |||||||| ||||| |||||||||||||||||| | ||||||  |||||||||| | ||||||||| |    
T  5543151 gtgtgagttatatgtcccacatccgataaaatagtaaagg-ttgaacaccttataagtaagaggatccataaacctattgccttaagattttgggtaaga 5543053  T
Q  170 gtg 172  Q
    |||    
T  5543052 gtg 5543050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 6712981 - 6713133
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag--tttgggtaac 168  Q
    |||||||||||||||| || |||||||| || |||||| ||| ||| |||||||||||||||||||| ||||||  ||||| |||| |  |||||||||     
T  6712981 gtgtgagttatatgtctcacatcggataaaacagtaaatgtt-gaacaccttataagtaagaggacccataaacctattgctttaaggtttttgggtaag 6713079  T
Q  169 agtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    |||| || |||| |||  ||| |||| | |||||| |||| ||||||| |||||    
T  6713080 agtgtgatgtctctcttgcttatgggattgttctagcctcgatgtggacggtcc 6713133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 38796371 - 38796299
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    ||||||||||||||||||| |||||||| || |||||| | ||||| |||||||||||||||||||| ||||||    
T  38796371 gtgtgagttatatgtcccacatcggataaaacagtaaatg-ttgaacaccttataagtaagaggacctataaac 38796299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 28254254 - 28254176
Alignment:
Q  82 atgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||| || |||||||||||||||||||||| ||| || ||||||||||||||||  |||||| | ||||||||||||||    
T  28254254 atgtctcacatcggatagaaaagtaaaggtt-gaacactttataagtaagaggactcataaacactttgccttaaagttt 28254176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 74 - 161
Target Start/End: Complemental strand, 37895211 - 37895125
Alignment:
Q  74 tgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||| ||||||||||||| |||| | |||||||||||| |||||| || ||  |||||| ||||||||||| ||||    
T  37895211 tgagttatatgtcccacatcggatagaaaaataaaag-ttgaaaaccttaaaagtaaaagaacacataaacccattgccttaaggttt 37895125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 7598233 - 7598322
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||| |||||||| | | |||| ||||||||||||||| || || ||||||||| |||||||||| |||||||||| ||||||| ||||    
T  7598233 gtgtgaattatatgttctacatcgaatagaaaagtaaagg-ttcaacaccttataaataagaggacccataaactcatagccttaaggttt 7598322  T

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Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 12529181 - 12529092
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| | |||  ||| || ||||||| || ||| ||| |||||||||||||||  |||||||||||||||||||||||    
T  12529181 gtgtgagttatatgtcctacatcaaataaaacagtaaagatt-gaacaccgtataagtaagaggactcataaactcattgccttaaagttt 12529092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 38796773 - 38796684
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| ||| |||| || | |||||||| ||| |||||||||||||||||||| ||||||  | |||||||| ||||    
T  38796773 gtgtgagttatatgtcccacatctgataaaacaataaaggtt-gaacaccttataagtaagaggacccataaacctaatgccttaaggttt 38796684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 1769897 - 1769973
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcat 148  Q
    |||||||||||||||| || |||||||| || |||||| ||| ||| |||||||||||||||||||  ||||||||||    
T  1769897 gtgtgagttatatgtcacacatcggataaaagagtaaaagtt-gaacaccttataagtaagaggactcataaactcat 1769973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 31468899 - 31468814
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| | ||||    |||||||||| |||||||||||||||||| ||||    
T  31468899 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaatatctta----taagaggacccataaactcattgccttaaggttt 31468814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 15511646 - 15511547
Alignment:
Q  73 gtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaacagt 171  Q
    |||||||||||||| || | |||||| || |||||||||| ||| || ||||||||||||||||| |||||| ||||| ||||| | ||||||||| |||    
T  15511646 gtgagttatatgtcacacaacggataaaagagtaaaggtt-gaacacgttataagtaagaggacccataaacccattgtcttaagattttgggtaagagt 15511548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 30313189 - 30313303
Alignment:
Q  77 gttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaacagtgcga 175  Q
    |||||||||| || |||||||||||||||  ||||| ||| || |||||||| |||||||| | |||||||||||||||| | ||||||||| |||| |     
T  30313189 gttatatgtctcacatcggatagaaaagtggaggtt-gaacac-ttataagtgagaggacccaaaaactcattgccttaagattttgggtaagagtgtgg 30313286  T
Q  176 cgtctttctctcttgtg 192  Q
    ||||| |||| ||||||    
T  30313287 cgtctctctcacttgtg 30313303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 37894844 - 37894761
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    |||||||||||||||||| || | |||||||||||||||  | |||||||||||||||||| |||  |||||  |||||||||||    
T  37894844 tgtgagttatatgtcccacattgaatagaaaagtaaagg-ctaaaaaccttataagtaagaagactcataaatccattgccttaa 37894761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 30323469 - 30323558
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||| ||||||||||||| ||| ||||||||| |  ||||| ||| || ||| |||| |||||||| |||||||||||||||||| ||||    
T  30323469 gtgtgtgttatatgtcccaaatcagatagaaaattggaggtt-gaacactttagaagtgagaggacctataaactcattgccttaaggttt 30323558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 33561604 - 33561515
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||| ||| ||| |||||||||||  |||||  || || |||||||| |||||||| |||||||||||| ||||| ||||    
T  33561604 gtgtgagttatatgttccacatcagatagaaaagtggaggtta-aacactttataagtgagaggacccataaactcattgtcttaaggttt 33561515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 33731653 - 33731742
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||| || || |||||||| || |||||||||| ||  |||||||||||||||||| | ||||||  |||||||||| ||||    
T  33731653 gtgtgagttatatatctcacatcggataaaagagtaaaggtt-gagcaccttataagtaagaggatccataaacctattgccttaaggttt 33731742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 36178422 - 36178333
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||||  ||||||| || |||||||| | ||| |||||||||||||| ||||  |||||| ||||| ||||| ||||    
T  36178422 gtgtgagttatatgtcccacttcggataaaatagtaaagg-tggaacaccttataagtaaggggactcataaacccattgtcttaaggttt 36178333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 14745446 - 14745358
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||| |||| ||| || ||||| |||| ||| | ||| |||||| ||||||| |||||| ||||||||||| ||||    
T  14745446 tgtgagttatatgtcccacatcgaataaaatagtaatggtt-gaacatcttgtaagtatgaggacccataaacccattgccttaaggttt 14745358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 29676908 - 29677064
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagag-----gaccaataaactcattgccttaaag-tttggg 164  Q
    ||||||||||||||||||| |||||||| || ||||||||||| || |||||||| || ||||     |||| |||||| ||||||||||| | |||  |    
T  29676908 gtgtgagttatatgtcccacatcggataaaagagtaaaggttt-aacaccttataggtgagaggagaagacccataaacccattgccttaaggctttaag 29677006  T
Q  165 taacagtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |||| |  |||| |||   ||||||||| |||| |||||| |||||||||||||    
T  29677007 taagagtgtggtgtctctcttaattgtggggttgttccaacctcgatgtggatggtcc 29677064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 36178311 - 36178223
Alignment:
Q  84 gtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaacagtg 172  Q
    |||||| |||||||| || |||||||||| ||| |||||||||||||| | ||| |||||| ||||||||||| | ||||||||| ||||    
T  36178311 gtcccacatcggataaaatagtaaaggtt-gaacaccttataagtaagggaacccataaacccattgccttaagattttgggtaagagtg 36178223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 37632750 - 37632678
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    ||||||||||||||||| | |||||||| || |||||||||||| | |  ||||||||||||||||| ||||||    
T  37632750 gtgtgagttatatgtcctacatcggataaaatagtaaaggtttg-acattttataagtaagaggacccataaac 37632678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 6422126 - 6422204
Alignment:
Q  82 atgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||| ||| |||| ||||||||||| ||||| || |||||| |||||||||| |||||| ||| ||||||| ||||    
T  6422126 atgtcccacatcagataaaaaagtaaagg-ttgaacacattataattaagaggacccataaacccatagccttaaggttt 6422204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 161
Target Start/End: Original strand, 9231257 - 9231343
Alignment:
Q  74 tgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||| |||||| |||||||||||||||| ||||| |  |||||| |||||||| | || ||| ||  ||||||||||||    
T  9231257 tgagttatatgtctcatatcagatagaaaagtaaagg-ttgaacatattataaataagaggatccatcaacccaccgccttaaagttt 9231343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 40733888 - 40733950
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagagg 134  Q
    ||||||||||||||||||| |||| ||| || ||||||| ||| || |||||||||||||||||    
T  40733888 gtgtgagttatatgtcccacatcgaataaaagagtaaagattt-aacaccttataagtaagagg 40733950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 29874176 - 29874087
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||| ||||||||||||| ||| |||||||||||  ||| ||||| || |||||| |  ||||||| |||||| ||||||||||| ||||    
T  29874176 gtgtgtgttatatgtcccacatcagatagaaaagtggagg-ttgaacactttataattgggaggacccataaacccattgccttaaggttt 29874087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 112
Target Start/End: Complemental strand, 36785716 - 36785675
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtt 112  Q
    ||||||||||||||||||| |||||||| || ||||||||||    
T  36785716 gtgtgagttatatgtcccacatcggataaaatagtaaaggtt 36785675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 3673122 - 3673234
Alignment:
Q  121 ttataagtaagaggaccaataaactcattgccttaa-agtttgggtaacagtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatgg 219  Q
    ||||||||||||||| | ||||||||||||| |||| | ||||| ||| |||| || |||| |||  || ||| ||| |||||| |||| ||||||| ||    
T  3673122 ttataagtaagaggatccataaactcattgctttaagattttggctaagagtgtgatgtctctcttactagtgtggttgttctagcctcgatgtggacgg 3673221  T
Q  220 tcctcctgactcc 232  Q
    ||| |||| ||||    
T  3673222 tccccctggctcc 3673234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 29676543 - 29676622
Alignment:
Q  74 tgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcctt 154  Q
    ||||||||||||| || || ||||| || ||||||| || ||| || |||||||| |||| ||| ||||||||||||||||    
T  29676543 tgagttatatgtctcacattggataaaagagtaaagatt-gaacacattataagtgagagaacccataaactcattgcctt 29676622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 29873684 - 29873569
Alignment:
Q  77 gttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcga 175  Q
    |||| |||||||| ||| |||||||||||  ||||| ||| |  ||||||||  ||||||  |||||||||||||||||| | |||| |||| |||| ||    
T  29873684 gttacatgtcccacatcagatagaaaagtggaggtt-gaacattttataagtgggaggactcataaactcattgccttaaggttttgagtaagagtgtga 29873586  T
Q  176 cgtctttctctcttgtg 192  Q
    ||||| |||| ||||||    
T  29873585 cgtctctctcacttgtg 29873569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 179
Target Start/End: Complemental strand, 33953923 - 33953816
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcctt-aaagtttgggtaacag 170  Q
    ||||||||||| |||||| ||| |||||||||||  ||| ||||| ||  ||||||| |||||||| ||||||   ||||||| ||| ||||||||| ||    
T  33953923 tgtgagttataagtcccacatcagatagaaaagtggagg-ttgaacactatataagtgagaggacccataaacctgttgccttaaaattttgggtaagag 33953825  T
Q  171 tgcgacgtc 179  Q
    || ||||||    
T  33953824 tgtgacgtc 33953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 42515031 - 42515078
Alignment:
Q  81 tatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagta 129  Q
    ||||||||| |||||||||||||||||||| || || ||||||||||||    
T  42515031 tatgtcccacatcggatagaaaagtaaagg-ttaaacaccttataagta 42515078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 40518587 - 40518740
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||| ||||||||| |||||||||| |||||| || || ||||| | ||||||||| |    
T  40518587 gtgtgagttatatgtcccacatcagatagaaaagtaaagg-ttgaacaccttataaataagaggacccataaacccaatgacttaaggttttgggtaaga 40518685  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctc 224  Q
    ||| ||||||  |||  |||||| ||| |||||| |||||||||||| |||||||    
T  40518686 gtgtgacgtcactcttgcttgtgtggttgttctagcctcaatgtggacggtcctc 40518740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 3669692 - 3669843
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||| |||| || |||||||||| ||| |||||||||||||||||||  |||||||||||||||||| | ||||||||| |    
T  3669692 gtgtgagttatatgtcccacatcagataaaatagtaaaggtt-gaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaaga 3669790  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| |||||||||||||    
T  3669791 gtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggatggtcc 3669843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 203
Target Start/End: Original strand, 147456 - 147588
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| ||||||||| |||||||||| ||||||  |||||||||||| ||||||||| |    
T  147456 gtgtgagttatatgtcccacatcggataaaagagtaaagg-ttgaacaccttataaataagaggacccataaacctattgccttaaagttttgggtaaga 147554  T
Q  170 gtgcgacgtctttctctcttgtggggtagttcta 203  Q
    ||| | ||||| |||  |||||| ||||||||||    
T  147555 gtgtggcgtctctcttgcttgtgcggtagttcta 147588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 34835216 - 34835303
Alignment:
Q  73 gtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| ||| |||| || |||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  34835216 gtgagttatatgtcccacatccgataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaactcattgccttaaagttt 34835303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 71 - 225
Target Start/End: Complemental strand, 3038443 - 3038289
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| || |||||||||| |||||| |||||| ||||||||||| | ||||||||| |    
T  3038443 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacactttataagtaaaaggacccataaacccattgccttaaggttttgggtaaga 3038345  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcc 225  Q
    ||| | | ||| |||  |||||| ||| |||||| |||| ||||||| ||||||||    
T  3038344 gtgtggcatctctcttgcttgtgtggttgttctagcctcgatgtggacggtcctcc 3038289  T

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Target: chr8; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 9608750 - 9608839
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||| |||  |||||| ||||    
T  9608750 gtgtgagttatatgtcccatatcggatagaaaagtaaagg-ttgaacaccttataagtaagatgacccataaacccatcaccttaaggttt 9608839  T

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Target: chr8; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 25561969 - 25561817
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt--gggtaac 168  Q
    ||||||||||||||||||| |||||||| || |||||| ||| ||| |||||||||||||||||||| |||||||||||| ||||| ||||  ||||||     
T  25561969 gtgtgagttatatgtcccacatcggataaaagagtaaacgtt-gaacaccttataagtaagaggacccataaactcattgtcttaaggttttggggtaag 25561871  T
Q  169 agtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    |||| ||| ||| |||  |||||| ||| | |||| |||| ||||||| |||||    
T  25561870 agtgtgacatctctcttgcttgtgtggttgctctagcctcgatgtggaaggtcc 25561817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 41972163 - 41972252
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| | |||||| |||||| ||||||| ||||||||    
T  41972163 gtgtgagttatatgtcccacatcggatagaaaagtaaagg-ttgaacaccttataagtgataggacccataaacccattgccataaagttt 41972252  T

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Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 221
Target Start/End: Complemental strand, 70425 - 70277
Alignment:
Q  73 gtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagt 171  Q
    ||||||||||||||||| |||||||| || |||||| ||| ||| | |||||||||||||||||| |||||| || |||||||| | ||| ||||| |||    
T  70425 gtgagttatatgtcccacatcggataaaagagtaaatgtt-gaacatcttataagtaagaggacccataaacccactgccttaaggttttaggtaagagt 70327  T
Q  172 gcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtc 221  Q
    | ||||||| |||  |||||| ||| ||||||||||||||| ||| ||||    
T  70326 gtgacgtctatcttgcttgtgtggttgttctaacctcaatgcggacggtc 70277  T

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Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 45122063 - 45121962
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    ||||||||||||||||||| |||| ||| || |||||||||| ||| || ||||||||||||||||  |||||||||||||||||| | |||||||||||    
T  45122063 gtgtgagttatatgtcccacatcgcataaaatagtaaaggtt-gaacactttataagtaagaggactcataaactcattgccttaagattttgggtaaca 45121965  T
Q  170 gtg 172  Q
    |||    
T  45121964 gtg 45121962  T

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Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 9309360 - 9309444
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    ||||||||||||||||||| |||||||| || |||||| ||| ||| ||||||||||||||||||||  |||||||||||||||||    
T  9309360 gtgtgagttatatgtcccacatcggataaaagagtaaatgtt-gaacaccttataagtaagaggacccttaaactcattgccttaa 9309444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 8918917 - 8918766
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt-gggtaaca 169  Q
    |||||||||| |||||||| ||| ||||| | |||||||||| ||| || ||||||||||||||||| ||||||  |||| ||||| |||| |||||| |    
T  8918917 gtgtgagttacatgtcccacatcagatagcagagtaaaggtt-gaacactttataagtaagaggacccataaacctattgacttaaggttttgggtaaga 8918819  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |||||||||||  | |||| ||| ||| ||||||| ||||||| |||||    
T  8918818 gtgtgacgtctttcttgcgtgtgtggttgttttaacctcgatgtggacggtcc 8918766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 218
Target Start/End: Original strand, 34834881 - 34835028
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| || ||||| || ||||||||||  || ||||||||||||||| |||  |||||||||||||||||| | ||||||||| |    
T  34834881 gtgtgagttatatgtcccacattggataaaatagtaaaggtta-aacaccttataagtaagatgactcataaactcattgccttaaggttttgggtaaga 34834979  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatg 218  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| |||||||||    
T  34834980 gtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggatg 34835028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 214
Target Start/End: Complemental strand, 45122210 - 45122067
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || |||||||| || |||||||||| ||| |||||||||||||||| ||| |||||||||||  ||||| | ||||||||| |    
T  45122210 gtgtgagttatatgtctcacatcggataaaatagtaaaggtt-gaacaccttataagtaagagaacccataaactcattttcttaaggttttgggtaaga 45122112  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtg 214  Q
    ||| |  |||| |||  |||||||||| |||||| |||| |||||    
T  45122111 gtgtggtgtctctcttacttgtggggttgttctagcctcgatgtg 45122067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 43398224 - 43398132
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaa---gaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||| |||   ||||||| ||||| |||||||||||||||||    
T  43398224 gtgtgagttatatatctcatatcggatagaaaagtaaagg-ttgaacaccttataaataagaggaggacccataaattcattgccttaaagttt 43398132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 1014024 - 1013935
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||| ||| |||||||| || |||||| ||| ||| ||| ||||||||||||||||||||||| |||||||||| |||||    
T  1014024 gtgtgagttatatgttccacatcggataaaatagtaaaagtt-gaacaccctataagtaagaggaccaataaacccattgccttagagttt 1013935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 216
Target Start/End: Original strand, 3670065 - 3670210
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || ||||||||||| || |||||||||||| ||||||| ||||||  ||| |||||| | ||||||||| |    
T  3670065 gtgtgagttatatgtcccacatcggataaaatagtaaaggttt-aacaccttataagtatgaggacccataaacctatttccttaaggttttgggtaaga 3670163  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| |||||||    
T  3670164 gtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgga 3670210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 220
Target Start/End: Original strand, 30359276 - 30359425
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || |||||||| || |||||| | ||||| |||||||||| ||||||||| |||||| ||| ||||||| | ||||||||| |    
T  30359276 gtgtgagttatatgtctcacatcggataaaagagtaaatg-ttgaacaccttataagcaagaggacccataaacccatagccttaaggttttgggtaaga 30359374  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggt 220  Q
    ||| |  |||| ||| |||||||  || ||| || ||||||||||||||||    
T  30359375 gtgtggtgtctctctttcttgtgatgttgttttagcctcaatgtggatggt 30359425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 34835481 - 34835569
Alignment:
Q  73 gtgagttatatgtcccatatcg-gatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||  ||  |||| || ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  34835481 gtgagttatatgtcccacgtcccgataaaatagtaaaggttt-aacaccttataagtaagaggacccataaactcattgccttaaagttt 34835569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 34835747 - 34835835
Alignment:
Q  73 gtgagttatatgtcccatatcg-gatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||  ||  |||| || ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  34835747 gtgagttatatgtcccacgtcccgataaaatagtaaaggttt-aacaccttataagtaagaggacccataaactcattgccttaaagttt 34835835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 5420663 - 5420745
Alignment:
Q  78 ttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||| ||||||||||| |||||||| ||||| | |||||||||||||||||  |||||| ||||||||||| ||||    
T  5420663 ttatatgtcccacatcggatagaatagtaaagg-ttgaacatcttataagtaagaggactcataaacccattgccttaaggttt 5420745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 33113517 - 33113419
Alignment:
Q  74 tgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaacagtg 172  Q
    |||||||||||||| | |||||||| || |||||||||| |||   |||||||||||||||||| |||||||||||||||||| | ||||||||| ||||    
T  33113517 tgagttatatgtcctacatcggataaaatagtaaaggtt-gaacgtcttataagtaagaggacccataaactcattgccttaagattttgggtaagagtg 33113419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 220
Target Start/End: Complemental strand, 1014398 - 1014249
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||  | ||| |||| || |||||||||| ||| ||||||||||||||||||||  ||||||| || |||||||| ||||||||| |    
T  1014398 gtgtgagttatatgtcatacatcagataaaatagtaaaggtt-gaacaccttataagtaagaggacccgtaaactcgttaccttaaagttttgggtaaga 1014300  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggt 220  Q
    ||| |  |||| ||   |||||| ||| |||||| |||| |||||||||||    
T  1014299 gtgtggtgtctctcctgcttgtgcggttgttctagcctcgatgtggatggt 1014249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 227
Target Start/End: Original strand, 45122649 - 45122785
Alignment:
Q  91 atcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcgacgtctttctctctt 189  Q
    |||||||| || |||||||||| ||| |||||||||||||||||||| |||||||||||| ||||| | ||||||||  |||| | ||||| |||  |||    
T  45122649 atcggataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtatgagtgtggcgtctctcttgctt 45122747  T
Q  190 gtggggtagttctaacctcaatgtggatggtcctcctg 227  Q
    ||| ||| |||| | |||| ||||||| ||||| ||||    
T  45122748 gtgtggttgttcaagcctcgatgtggaaggtccccctg 45122785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 9482755 - 9482676
Alignment:
Q  73 gtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcct 153  Q
    ||||||||||||| ||| || ||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  9482755 gtgagttatatgttccacatgggataaaagagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgcct 9482676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 41416322 - 41416252
Alignment:
Q  73 gtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    ||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||| | ||||||    
T  41416322 gtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggatccataaac 41416252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 18372852 - 18372787
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggacc 137  Q
    |||||||||||||||| || |||||||| || |||||||| ||||| ||||||||||||||||||||    
T  18372852 gtgtgagttatatgtcacacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggacc 18372787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 40579659 - 40579570
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||| ||||||||  ||||| ||||| || |||||||||| ||| |||||||||||||||||||| ||||||| ||||| |||| ||||    
T  40579659 gtgtgaattatatgtttcatattggataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaacttattgctttaaggttt 40579570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 4154819 - 4154739
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcc 152  Q
    ||||||||||||||||||| ||| |||||||||||  ||| ||||| || |||||||| | |||||| ||||||||||||||    
T  4154819 gtgtgagttatatgtcccacatctgatagaaaagtggagg-ttgaacactttataagtgaaaggacccataaactcattgcc 4154739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 6877016 - 6876932
Alignment:
Q  71 gtgtgagttatat-gtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcctta 155  Q
    ||||||||||||| |||||| |||||||| ||||||||||| ||||| ||||||||| ||||| |||| ||| |||||||| ||||    
T  6877016 gtgtgagttatatagtcccacatcggataaaaaagtaaagg-ttgaacaccttataaataagatgacccatacactcattgtctta 6876932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 18373084 - 18373004
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcc 152  Q
    |||||| ||||||||||||  ||||||| || |||||||||| ||| ||||||||| |||||||||  ||||||||||||||    
T  18373084 gtgtgatttatatgtcccacttcggataaaatagtaaaggtt-gaacaccttataaataagaggactcataaactcattgcc 18373004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 216
Target Start/End: Original strand, 30441086 - 30441235
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaacc----ttataagtaagaggaccaataaactcattgccttaaag-tttgggt 165  Q
    ||||||||||||||||||| ||||| || || |||||||| ||||| |||    |||||||||||||| || |||||| ||||||||||| | |||||||    
T  30441086 gtgtgagttatatgtcccacatcggctaaaatagtaaagg-ttgaacaccttaattataagtaagagggcccataaacccattgccttaaggttttgggt 30441184  T
Q  166 aacagtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    || |||| |  |||| |||  |||||| ||| |||||| |||| |||||||    
T  30441185 aagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgga 30441235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 1514065 - 1514003
Alignment:
Q  74 tgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggacc 137  Q
    |||||||||| ||||| |||||||| || |||||||||| ||| ||||||||||||||||||||    
T  1514065 tgagttatatatcccacatcggataaaagagtaaaggtt-gaacaccttataagtaagaggacc 1514003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 18372142 - 18372004
Alignment:
Q  76 agttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcg 174  Q
    |||||||||| ||| |||  ||| || |||||||||| ||| |||||||||||||||||| | ||||||||||||| |||| | ||||||||| |||| |    
T  18372142 agttatatgtaccacatccaataaaatagtaaaggtt-gaacaccttataagtaagaggatccataaactcattgctttaaggttttgggtaagagtgtg 18372044  T
Q  175 acgtctttctctcttgtggggtagttctaacctcaatgtg 214  Q
      || | |||| |||||| ||| | |||| ||||||||||    
T  18372043 gtgtttctctcgcttgtgcggttgctctagcctcaatgtg 18372004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 40518074 - 40518227
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaa--gtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaa 167  Q
    ||||||||||||||| ||| || ||||| ||||  ||||||||| ||| |||||||||||||  ||||| |||||| || |||||||| | |||||||||    
T  40518074 gtgtgagttatatgttccacattggataaaaaaaagtaaaggtt-gaacaccttataagtaaatggacccataaacccaatgccttaaggttttgggtaa 40518172  T
Q  168 cagtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
     |||| | ||||| |||  |||||| ||| |||||| |||  ||||||| |||||    
T  40518173 gagtgtggcgtctctcttgcttgtgtggttgttctagccttgatgtggacggtcc 40518227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 9483320 - 9483251
Alignment:
Q  91 atcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||| ||||| ||||    
T  9483320 atcggataaaagagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgtcttaaggttt 9483251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 18372409 - 18372344
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggacc 137  Q
    |||||||||||||||| || |||||||| || |||||||| ||||| ||||||||||||||| ||||    
T  18372409 gtgtgagttatatgtctcacatcggataaaatagtaaagg-ttgaacaccttataagtaagaagacc 18372344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 232
Target Start/End: Complemental strand, 20870718 - 20870565
Alignment:
Q  79 tatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaacagtgcgacg 177  Q
    ||||||| ||| ||| |||| || |||||||||| ||| | |||||||||||||||||| |||||| || |||||||| | ||||| ||| |||| |  |    
T  20870718 tatatgttccacatcagataaaatagtaaaggtt-gaacatcttataagtaagaggacccataaacccactgccttaagattttggataagagtgtggtg 20870620  T
Q  178 tctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
    ||| |||  |||||| ||| ||||||||||  || |||| |||||||||| ||||    
T  20870619 tctctcttgcttgtgtggttgttctaaccttgatatggacggtcctcctggctcc 20870565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 37544643 - 37544498
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||| ||| || |||||||| || |||||||| ||||| || ||||||| ||||||||| |||||  |||| | |||| | ||||||||| |    
T  37544643 gtgtgagttataagtcgcacatcggataaaatagtaaagg-ttgaacacattataagaaagaggacccataaatccattactttaaggttttgggtaaga 37544545  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    ||| |  ||||||||  |||||| ||| |||||| |||| |||||||    
T  37544544 gtgtggtgtctttcttacttgtgcggttgttctagcctcgatgtgga 37544498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 9620829 - 9620745
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    |||||||||||||||| || | | |||||||||||| | ||| ||  || |||||||| |||||||| ||||||||||||||||||    
T  9620829 gtgtgagttatatgtctcacaacagatagaaaagtagaagtt-gatcactttataagtgagaggacccataaactcattgccttaa 9620745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 25561792 - 25561736
Alignment:
Q  76 agttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagag 133  Q
    |||||||||||||| |||||||| || |||||||| ||||| ||||||||||||||||    
T  25561792 agttatatgtcccacatcggataaaagagtaaagg-ttgaacaccttataagtaagag 25561736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 232
Target Start/End: Original strand, 32305503 - 32305643
Alignment:
Q  92 tcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaacagtgcgacgtctttctctcttg 190  Q
    ||||||| || |||||||||| ||| ||||||||||||||| |||| |||||| |||| |||||| | ||||| ||| |||| | ||||||| |  |||     
T  32305503 tcggataaaatagtaaaggtt-gaacaccttataagtaagaagacctataaacccattaccttaagattttggataagagtgtggcgtctttattactta 32305601  T
Q  191 tggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
    ||  || ||||||||||  ||||||| ||||| |||||||||    
T  32305602 tgcagttgttctaaccttgatgtggacggtccccctgactcc 32305643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 4154432 - 4154350
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    |||||||||||||||| | ||| |||||||||||  ||| ||||| || |||||||| ||| |||| ||||||||||||||||||    
T  4154432 tgtgagttatatgtcctacatcagatagaaaagtggagg-ttgaacactttataagtgaga-gacccataaactcattgccttaa 4154350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 5915928 - 5916023
Alignment:
Q  128 taagaggaccaataaactcattgccttaaag-tttgggtaacagtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||| |  |||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  5915928 taagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 5916023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 9609114 - 9609179
Alignment:
Q  95 gatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||| ||| | ||||||||||||| |||| |||||| ||| ||||||| ||||    
T  9609114 gatagaaaagtaaaggtt-gaacatcttataagtaagatgacccataaacccatcgccttaatgttt 9609179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 18380170 - 18380081
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||| ||||| |||| ||| || |||||||| ||||| |||||||||||||| || || |||||| || | |||||| ||||    
T  18380170 gtgtgagttatatatcccacatcgaataaaatagtaaagg-ttgaacaccttataagtaagggggcctataaacccactaccttaaggttt 18380081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 30359614 - 30359715
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    |||||||||||||||| || ||| |||| || |||||| ||| ||| |||||||||||||||||||  |||||| |||  |||||| | ||||||||| |    
T  30359614 gtgtgagttatatgtctcacatcagataaaagagtaaaagtt-gaacaccttataagtaagaggactcataaacccataaccttaagattttgggtaaga 30359712  T
Q  170 gtg 172  Q
    |||    
T  30359713 gtg 30359715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 6651555 - 6651660
Alignment:
Q  128 taagaggaccaataaactcattgccttaaagttt-gggtaacagtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcct 226  Q
    |||||| ||| ||||| |||||||||||| |||| |||||| |||| |  |||| |||  |||||| | | ||||||||||| ||||||||||||| |||    
T  6651555 taagagaacccataaattcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcgattgttctaacctcgatgtggatggtccccct 6651654  T
Q  227 gactcc 232  Q
     |||||    
T  6651655 aactcc 6651660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 112
Target Start/End: Original strand, 6731909 - 6731950
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtt 112  Q
    ||||||||||||||||||| |||||||| || ||||||||||    
T  6731909 gtgtgagttatatgtcccacatcggataaaatagtaaaggtt 6731950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 18372755 - 18372676
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcc 152  Q
    |||||| |||||||| |||| ||||||| || |||||||||| ||| || ||||||||||||||||  |||||| |||||||    
T  18372755 gtgtgatttatatgttccatttcggataaaatagtaaaggtt-gaacac-ttataagtaagaggactcataaacccattgcc 18372676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 112
Target Start/End: Original strand, 45123011 - 45123052
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtt 112  Q
    ||||||||||||||||||| |||||||| || ||||||||||    
T  45123011 gtgtgagttatatgtcccacatcggataaaatagtaaaggtt 45123052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 18603273 - 18603112
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||| |||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| | ||||||||| |    
T  18603273 gtgtgagttatatgtcccacatcagataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 18603175  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
    ||| | | ||| |||  |||||| |||||||||| |||| ||||||| ||| |||||| ||||    
T  18603174 gtgtggcatctctcttgcttgtgtggtagttctagcctcgatgtggacggttctcctggctcc 18603112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 215
Target Start/End: Original strand, 26074617 - 26074761
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||| |||||||||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| | ||||||||| |    
T  26074617 gtgtgagttatatgttccatatcggataaaagagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 26074715  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgg 215  Q
    ||| |  |||| |||| || ||| ||| | ||||||||| ||||||    
T  26074716 gtgtggtgtctctctcactagtgtggttgctctaacctcgatgtgg 26074761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 32487399 - 32487549
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| ||| |||||||||||||||| |||||| ||||||||||| | ||||||||| |    
T  32487399 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacacc-tataagtaagaggacccataaacccattgccttaaggttttgggtaaga 32487496  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| ||||| | |||  ||| || ||| |||||| |||| |||||||||||||    
T  32487497 gtgtgacgtatctcttgcttatgtggttgttctagcctcgatgtggatggtcc 32487549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 36568720 - 36568571
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||| ||| ||||  ||||| ||||||||||| | ||| ||||| |    
T  36568720 gtgtgagttatatgtcccacatcggatagaaaagtaaaag-ttgaacaccttataagtgagatgacccgtaaacccattgccttaaggtttttggtaaga 36568622  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| | ||||  ||||||||||| ||| |||||| |||| ||||||| |||||    
T  36568621 gtgtggcgtc--tctctcttgtgtggttgttctatcctcgatgtggaaggtcc 36568571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 1028670 - 1028519
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||| || ||||||||||||||||| ||||||  ||  |||||| | ||| ||||| |    
T  1028670 gtgtgagttatatgtcccacatcggatagaaaagtaaagg-atgaacactttataagtaagaggacccataaacctataaccttaaggtttttggtaaga 1028572  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| | ||||| |||| |||||| ||| |||||| |||| ||||||| |||||    
T  1028571 gtgtggcgtctctctcacttgtgcggttgttctagcctcgatgtggacggtcc 1028519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 36492370 - 36492219
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||||| ||| ||||||||||||||||||||||||||| |||| |||| | | ||||| ||| |    
T  36492370 gtgtgagttatatgtcccacatcggataaaagagtaaaggtt-gaacaccttataagtaagaggaccaataaacacattacctttaggttttggataaga 36492272  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  36492271 gtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcc 36492219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 218
Target Start/End: Original strand, 38427553 - 38427699
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||| | ||||||||| |||||||| || ||  ||||| ||||| | |||| |||| |    
T  38427553 gtgtgagttatatgtcccacattggatagaaaagtaaagg-ttgaacatcttataagt-agaggacccattaatccattgtcttaaggttttgtgtaaga 38427650  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatg 218  Q
    ||| ||||||| |||| |||||| ||| ||||||||||| |||||||||    
T  38427651 gtgtgacgtctctctcacttgtgcggttgttctaacctcgatgtggatg 38427699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 40296468 - 40296317
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || || ||||||| ||| |||||||||||||||||||| |||||| ||||||||| | | ||||||||| |    
T  40296468 gtgtgagttatatgtcccacatcggataaaatagaaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttgaggttttgggtaaga 40296370  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  40296369 gtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 40296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 299494 - 299583
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| ||||||||||||||| |||| |||||||||| ||||||| ||||    
T  299494 gtgtgagttatatgtcccacatcggataaaacagtaaagg-ttgaacaccttataagtaagatgacccataaactcatagccttaaggttt 299583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 6224201 - 6224290
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||||  ||||||| || |||||||||| ||| |||||||||||||||||||| |||||||||| ||||||| ||||    
T  6224201 gtgtgagttatatgtcccacttcggataaaagagtaaaggtt-gaacaccttataagtaagaggacccataaactcatcgccttaaggttt 6224290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 220
Target Start/End: Complemental strand, 26591063 - 26590914
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||| ||| |||| |||||||| || |||||||||||||| ||| |||||||||||||||||| | ||||| ||| |||||||| | |||| |||| |    
T  26591063 gtgtgatttaaatgttccatatcgaatcgaaaagtaaaggtt-gaacaccttataagtaagaggatccataaattcaatgccttaaggttttgagtaaga 26590965  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggt 220  Q
    ||| | ||||| |||| || ||| ||| ||||||||||| |||||||||||    
T  26590964 gtgtggcgtctctctcactagtgtggttgttctaacctcgatgtggatggt 26590914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 79 - 232
Target Start/End: Complemental strand, 3295489 - 3295337
Alignment:
Q  79 tatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagtttgggtaacagtgcgacgt 178  Q
    ||||||| ||| |||||||| || |||||||||| ||| |||||||||||||||||||| ||||||  |||||||||| |||| ||||| |||| |  ||    
T  3295489 tatatgttccacatcggataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaaccaattgccttaaggttttggtaagagtgtgttgt 3295391  T
Q  179 ctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
    || |||  |||||| ||| |||||| |||| ||||||| ||||| ||| |||||    
T  3295390 ctctcttgcttgtgtggttgttctagcctcgatgtggacggtccccctcactcc 3295337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 9498806 - 9498706
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaacag 170  Q
    ||||||||||||||| || ||| ||||||| |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| | ||||||||| ||    
T  9498806 tgtgagttatatgtctcacatcagatagaatagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaagattttgggtaagag 9498708  T
Q  171 tg 172  Q
    ||    
T  9498707 tg 9498706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 216
Target Start/End: Complemental strand, 34753173 - 34753033
Alignment:
Q  76 agttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcg 174  Q
    |||||||||||||| || ||||||||||||||| ||| ||| ||||||||||||||| |||| ||||||  |||||||||| | ||||||||| |||| |    
T  34753173 agttatatgtcccacattggatagaaaagtaaaagtt-gaacaccttataagtaagaagacccataaaccgattgccttaaggttttgggtaagagtgtg 34753075  T
Q  175 acgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
     ||||| |||  |||||| ||| |||||| |||| |||||||    
T  34753074 gcgtctctcttgcttgtgcggttgttctagcctcgatgtgga 34753033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 72 - 161
Target Start/End: Original strand, 41170640 - 41170728
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||||| |||||||| || |||||||||| ||| | |||||||||||||||||| |||||| ||||||||||| ||||    
T  41170640 tgtgagttatatgtcccacatcggataaaatagtaaaggtt-gaacatcttataagtaagaggacccataaacccattgccttaaggttt 41170728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 6500456 - 6500606
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||| | |||||||| || |||||||||| ||| ||||||||||||||||||||  ||||| ||||||||||| | ||||||||| |    
T  6500456 gtgtgagttatatgtcc-acatcggataaaatagtaaaggtt-gaacaccttataagtaagaggacctttaaacccattgccttaaggttttgggtaaga 6500553  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  6500554 gtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 6500606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 222
Target Start/End: Complemental strand, 11417128 - 11416979
Alignment:
Q  73 gtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagt 171  Q
    ||||||||||||| ||| |||||||| || |||||||||| ||| |||||||||||||||||| | |||||| ||||||||||| | |||| |||| |||    
T  11417128 gtgagttatatgttccacatcggataaaatagtaaaggtt-gaacaccttataagtaagaggatccataaacccattgccttaaggttttgtgtaagagt 11417030  T
Q  172 gcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    | ||  ||| |||  |||||||| | |||||| | || |||||||||||||    
T  11417029 gtgatctctctcttgcttgtgggattgttctagcttcgatgtggatggtcc 11416979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 13415913 - 13415776
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| |  |||||||||| ||| |||||||||||||||||||| ||||||  ||| |||||| | ||||||||| |    
T  13415913 gtgtgagttatatgtcccacatcggataaattagtaaaggtt-gaacaccttataagtaagaggacccataaacctattaccttaaggttttgggtaaga 13415815  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctc 208  Q
    ||| | ||||| |||  |||||| ||| |||||| ||||    
T  13415814 gtgtggcgtctctcttgcttgtgcggttgttctagcctc 13415776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 26075315 - 26075226
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||| ||||||||| || |||||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| ||||    
T  26075315 gtgtgatttatatgtctcacatcggataaaagagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttt 26075226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 216
Target Start/End: Original strand, 35150012 - 35150156
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || ||| |||| ||||| ||||||||||||||| |||| |||||  ||||| ||||| | ||||||||| |    
T  35150012 gtgtgagttatatgtcccacatcggataaaagagtcaagg-ttgaacaccttataagtaaga-gacccataaatccattgtcttaaggttttgggtaaaa 35150109  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    ||| |  |||| |||| || ||| ||| |||||||||||||||||||    
T  35150110 gtgtggtgtctctctcactagtgtggttgttctaacctcaatgtgga 35150156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 41632787 - 41632888
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    |||| ||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||| |||||| || ||| |||| | ||||||||| |    
T  41632787 gtgtaagttatatgtctcacatcggatagaaaagtaaagg-ttgaacaccttataagtaagaggacccataaacccaatgctttaagattttgggtaaga 41632885  T
Q  170 gtg 172  Q
    |||    
T  41632886 gtg 41632888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 215
Target Start/End: Complemental strand, 26074299 - 26074155
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || |||||||| ||||||||||| ||||| |||| ||| ||||||||||| || ||| ||||||||||| | ||||||||| |    
T  26074299 gtgtgagttatatgtcacacatcggataaaaaagtaaagg-ttgaacacctcatatgtaagaggacccatgaacccattgccttaaggttttgggtaaga 26074201  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgg 215  Q
    ||| |  |||| |||| || ||| ||| | ||||||||| ||||||    
T  26074200 gtgtggtgtctctctcactagtgtggttgctctaacctcgatgtgg 26074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 27502189 - 27502038
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    ||||||||||||||||||| || ||||| || ||||||||||  || |||||||||||||||||||| ||||||  |||||||||| | ||| ||||| |    
T  27502189 gtgtgagttatatgtcccacattggataaaatagtaaaggtta-aacaccttataagtaagaggacccataaacctattgccttaagatttttggtaaaa 27502091  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||| |||||    
T  27502090 gtgtggtgtctctcttgcttgtgtggttgttctatcctcgatgtggacggtcc 27502038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 216
Target Start/End: Original strand, 624201 - 624346
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| || | ||| || |||||||| ||||| || |||||||||||| |||| |||||| ||| ||||| | | ||||||||| |    
T  624201 gtgtgagttatatgtcccacattgtataaaatagtaaagg-ttgaacacgttataagtaagatgacccataaacccatagccttgaggttttgggtaaga 624299  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgga 216  Q
    ||| |  |||| |||| |||||||||| |||||| |||| |||||||    
T  624300 gtgtggtgtctctctcacttgtggggttgttctagcctcgatgtgga 624346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 6500828 - 6500916
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| | |||||||| || |||||||||| ||| ||||||||| ||| |||||| |||||||||||||||||| ||||    
T  6500828 gtgtgagttatatgtcc-acatcggataaaatagtaaaggtt-gaacaccttataaataaaaggacccataaactcattgccttaaggttt 6500916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 26074323 - 26074395
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    ||||||||||||||||||| ||| ||||||||| |||| | ||||| |||||||||||||||||||| ||||||    
T  26074323 gtgtgagttatatgtcccacatcagatagaaaactaaa-gattgaacaccttataagtaagaggacccataaac 26074395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 15370104 - 15370255
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||| ||| || |||||||| ||||| | |||||||||||||||||| |||||  ||  ||||||| | ||||||||| |    
T  15370104 gtgtgagttatatgtcccacatcgaataaaatagtaaagg-ttgaacatcttataagtaagaggacccataaatccacagccttaaggttttgggtaaga 15370202  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||||| | |||||| |||| ||||||| |||||    
T  15370203 gtgtggtgtctctcttgcttgtgggattgttctagcctcgatgtggacggtcc 15370255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 25327940 - 25328091
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||| | |||||||| || |||||| ||| ||| |||||||||||||||||||| ||||||  | |||||||| | ||||||||| |    
T  25327940 gtgtgagttatatgtcctacatcggataaaacagtaaaagtt-gaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggtaaga 25328038  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |  ||| ||| |||||| |||||||||||| |||||    
T  25328039 gtgtggtgtctctcttgcaagtgtggttgttctagcctcaatgtggacggtcc 25328091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 3295160 - 3295086
Alignment:
Q  79 tatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcctt 154  Q
    ||||||||||| |||||||| || |||||||||| ||| ||||||||||||||| |||| |||||| |||||||||    
T  3295160 tatatgtcccacatcggataaaatagtaaaggtt-gaacaccttataagtaagaagacccataaacccattgcctt 3295086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 225
Target Start/End: Original strand, 15370447 - 15370561
Alignment:
Q  112 ttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcgacgtctttctctcttgtggggtagttctaacctcaa 210  Q
    ||||| |||||||||||||||||||| |||||| ||| ||||||| | |||| |||| |||| | ||||| |||   ||||||||| |||||| |||| |    
T  15370447 ttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgcgtaagagtgtggcgtctctcttgtttgtggggttgttctagcctcga 15370546  T
Q  211 tgtggatggtcctcc 225  Q
    |||||| ||||||||    
T  15370547 tgtggacggtcctcc 15370561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 33747783 - 33747860
Alignment:
Q  78 ttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    |||||||||||| |||||||| || ||||||||||  || || ||||||||||||||| | ||||||||||||||||||    
T  33747783 ttatatgtcccacatcggataaaatagtaaaggtta-aatactttataagtaagaggatccataaactcattgccttaa 33747860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 42508617 - 42508706
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||| |||||| ||||| |||||||||||||||||||| || || | || ||||||||||||||  |||||| ||||||||||| ||||    
T  42508617 gtgtgaattatatatcccacatcggatagaaaagtaaagg-ttaaacatctaataagtaagaggactcataaacccattgccttaaggttt 42508706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 623823 - 623974
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || |||||||| || |||||||| ||||| || ||| |||||||  || | ||||||| || ||||||| | |||| |||| |    
T  623823 gtgtgagttatatgtctcacatcggatataatagtaaagg-ttgaacactttacaagtaagttgagccataaacttatagccttaaggttttgagtaaga 623921  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||| |||||||||| |||||| ||||||||| || |||||    
T  623922 gtgtggtgtctctctcacttgtggggttgttctagcctcaatgtagacggtcc 623974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 154
Target Start/End: Original strand, 31509628 - 31509710
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcctt 154  Q
    |||||||||||||||| || |||||||||||||||  ||| ||||  || |||||||| |||||||  ||||||||||||||||    
T  31509628 gtgtgagttatatgtctcacatcggatagaaaagtggagg-ttgagcactttataagtgagaggactcataaactcattgcctt 31509710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 2411012 - 2411101
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| | || ||||||| ||||||| | ||||| | ||| |||||||||| ||| ||||||| |||||||||| ||||    
T  2411012 gtgtgagttatatgtcctacattggatagagaagtaaaag-ttgaacatcttgtaagtaagagaacccataaacttattgccttaaggttt 2411101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 24489357 - 24489275
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    ||||||||||||||||||| ||| |||||||||| ||||| || || ||||||| |||||||  ||| |||||| |||||||||||    
T  24489357 gtgtgagttatatgtcccacatcagatagaaaagaaaagg-ttaaacaccttattagtaaga--acccataaacccattgccttaa 24489275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 26074935 - 26074846
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| ||  |||||||| ||||||| ||||||  |||| ||||| ||||    
T  26074935 gtgtgagttatatgtcccacatcggataaaagagtaaagg-ttgaacacaatataagtaggaggacccataaacctattgtcttaaggttt 26074846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 29549408 - 29549319
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||| ||||||| |||| || ||||||||  |||| ||| ||||||||||| |||| |||||| |||| |||||| ||||    
T  29549408 gtgtgagttatatgttccatatcagataaaatagtaaagg-atgaacaccatataagtaagaagacccataaacacattaccttaaggttt 29549319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 300964 - 301025
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagag 133  Q
    ||||| ||||||||||||| ||| |||| || |||||||| ||||| ||||||||||||||||    
T  300964 gtgtgggttatatgtcccacatcagataaaacagtaaagg-ttgaataccttataagtaagag 301025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 42405749 - 42405660
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| | |||||||| || |||||||| ||||| |||||| |||||| |||||  ||||||  | |||||||| ||||    
T  42405749 gtgtgagttatatgtccaacatcggataaaatagtaaagg-ttgaacaccttacaagtaaaaggactcataaacctaatgccttaaggttt 42405660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 112
Target Start/End: Complemental strand, 12662805 - 12662764
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtt 112  Q
    ||||||||||||||||||| |||||||| || ||||||||||    
T  12662805 gtgtgagttatatgtcccacatcggataaaatagtaaaggtt 12662764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 15772859 - 15773020
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||||||||||||||| || |||||| ||| ||| |||||||||||||||||||| ||||||||||||| |||| | ||||| ||| |    
T  15772859 gtgtgagttatatgtcccatatcggataaaagagtaaatgtt-gaacaccttataagtaagaggacccataaactcattgctttaaggttttggataaga 15772957  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
    ||| |  |||| |||  |||||| ||| ||||||||||| ||||||| ||||||  |||||||    
T  15772958 gtgtggtgtctctcttgcttgtgtggttgttctaacctcgatgtggacggtccttttgactcc 15773020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 222
Target Start/End: Complemental strand, 33803404 - 33803254
Alignment:
Q  72 tgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagt-ttgggtaacag 170  Q
    |||||||||||||||||| |||||||| || |||||||| ||||| ||| |||||||||||||||| |||||| |||||| |||| || |||||||| ||    
T  33803404 tgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccatataagtaagaggacccataaacccattgcattaaggtattgggtaagag 33803306  T
Q  171 tgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    || | |||||  |||||||||| ||| |||||| |||| ||||||| |||||    
T  33803305 tgtggcgtctccctctcttgtgtggttgttctagcctcgatgtggacggtcc 33803254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 71 - 225
Target Start/End: Complemental strand, 43346944 - 43346790
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||| |||| || |||||||||| ||| |||||||||||||||| ||| |||||||||||||||||| | ||||||||| |    
T  43346944 gtgtgagttatatgtcccacatcagataaaatagtaaaggtt-gaacaccttataagtaagagaacccataaactcattgccttaaggttttgggtaaga 43346846  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcc 225  Q
    ||| |  |||| |||  |||||| ||| |||||| |||| ||||||| ||||||||    
T  43346845 gtgtggtgtctctcttgcttgtgcggttgttctagcctctatgtggacggtcctcc 43346790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 42342541 - 42342380
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt-gggtaaca 169  Q
    ||||||||||||||||||| ||| |||| || ||||||||||  || |||||||||||||||||||| |||||  ||||| ||||| |||| |||||| |    
T  42342541 gtgtgagttatatgtcccacatccgataaaagagtaaaggttc-aacaccttataagtaagaggacccataaatccattgtcttaaggttttgggtaaga 42342443  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
    ||| ||||||| |||  |||||| ||| |||||| |||||||||||| ||||| |||| ||||    
T  42342442 gtgtgacgtctctcttgcttgtgcggttgttctagcctcaatgtggacggtccccctggctcc 42342380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 25739578 - 25739427
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||| ||| ||| | | |||||||||||||||| ||||||||||||| || | | ||||||||| |    
T  25739578 gtgtgagttatatgtcccacatcggataaaatagtaaaagtt-gaacatcatataagtaagaggacccataaactcattgcttttaggttttgggtaaga 25739480  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| ||||||| |||  |||||| |||||||||| |||| ||||||| |||||    
T  25739479 gtgtgacgtctctctagcttgtgcggtagttctagcctcgatgtggacggtcc 25739427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 21832496 - 21832407
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||  |||||||||| ||||||| ||||    
T  21832496 gtgtgagttatatgtcccacattggatagaaaagtaaagg-ttgaacaccttataagtaagaggactcataaactcatagccttaaggttt 21832407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 75 - 218
Target Start/End: Complemental strand, 39935104 - 39934961
Alignment:
Q  75 gagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgc 173  Q
    ||||||||||||| | |||||||| || |||||||||| ||| |||||||||||||||||| | |||||| ||||||||||||| |||| |||| ||||     
T  39935104 gagttatatgtcctacatcggataaaagagtaaaggtt-gaacaccttataagtaagaggatccataaacccattgccttaaagttttgagtaagagtgt 39935006  T
Q  174 gacgtctttctctcttgtggggtagttctaacctcaatgtggatg 218  Q
    || |||| |||  |||||| ||| |||||| |||| |||||||||    
T  39935005 gatgtctctcttgcttgtgtggttgttctagcctcgatgtggatg 39934961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 12114715 - 12114626
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||| |||||||| ||||| |||||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||| ||||| ||||    
T  12114715 gtgtaagttatatatcccacatcggatagaaaagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgtcttaaggttt 12114626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 22304574 - 22304663
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||| ||||||||||| |||||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| ||||    
T  22304574 gtgtgagctatatgtcccacatcggataaaatagtaaaggtt-gaataccttataagtaagaggacccataaacacattgccttaaggttt 22304663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 32463054 - 32462964
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| ||||||||||| |||||| | ||||| ||||||||||||||| |||  |||||| ||||||||||| ||||    
T  32463054 gtgtgagttatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaacccattgccttaaggttt 32462964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 35946527 - 35946616
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||| |||||| | ||||||||| ||||    
T  35946527 gtgtgagttatatgtcccacatcggataaaacagtaaagg-ttgaacaccttataagtaagaggacccataaacccgttgccttaaggttt 35946616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 15773197 - 15773360
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||| ||| || |||||| ||| ||| | |||||||||||||||||  |||| ||||||||||||||| ||||||||| |    
T  15773197 gtgtgagttatatgtcccacatcgaataaaagagtaaaagtt-gaacatcttataagtaagaggactcataagctcattgccttaaagttttgggtaaga 15773295  T
Q  170 gtgcgacg--tctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
    ||| || |  |||| ||  |||||| ||| ||||||||||| ||||||| | ||||||| |||||    
T  15773296 gtgtgatgtctcttgcttgcttgtgtggttgttctaacctcgatgtggacgatcctcctaactcc 15773360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 1634468 - 1634364
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||||||||||||| |||| | || || || ||||||||||||||||| |||||| ||||| ||||| | ||||||||| |    
T  1634468 gtgtgagttatatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaacccattggcttaaggttttgggtaaga 1634369  T
Q  170 gtgcg 174  Q
    |||||    
T  1634368 gtgcg 1634364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 25755399 - 25755550
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagtt-tgggtaaca 169  Q
    |||||||||||||||| || ||| |||| || |||||||| ||||| |||||||||||||||||||  |||||  ||||| | ||||||| ||||||| |    
T  25755399 gtgtgagttatatgtctcacatcagataaaagagtaaagg-ttgaataccttataagtaagaggactcataaatccattgtcctaaagttgtgggtaaaa 25755497  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| | ||||| |||  |||||| ||| |||||| |||| |||||||||||||    
T  25755498 gtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggatggtcc 25755550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 37990792 - 37990641
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||| ||| |||||||| || |||||| ||| ||| |||||||||||||||||||  |||||||||||||||||| | ||||||||| |    
T  37990792 gtgtgagttatatgttccacatcggataaaatagtaaatgtt-gaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaaga 37990694  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  |||||| | | |||||| |||| ||||||| |||||    
T  37990693 gtgtggtgtctctcttgcttgtgtgattgttctagcctcgatgtggacggtcc 37990641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 37991130 - 37990979
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||| || || ||||| || |||||||||| ||| |||||||||||||||||||| |||||||||| ||||||| | ||||||||| |    
T  37991130 gtgtgagttatatgtctcacattggataaaatagtaaaggtt-gaacaccttataagtaagaggacctataaactcatcgccttaaggttttgggtaaga 37991032  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  |||| |||  ||| || ||| |||||| |||| ||||||| |||||    
T  37991031 gtgtggtgtctctcttgcttatgtggttgttctagcctcgatgtggacggtcc 37990979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 49336840 - 49336693
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagtt-tgggtaaca 169  Q
    |||||||||| ||||| || |||||||||||||||||||| ||||  |||||||||||||||||||| |||||| ||| | ||||||||| ||||||| |    
T  49336840 gtgtgagttacatgtctcacatcggatagaaaagtaaagg-ttgaccaccttataagtaagaggacccataaacccatagtcttaaagttctgggtaaga 49336742  T
Q  170 gtgcgacgtctttc-tctcttgtggggtagttctaacctcaatgtggat 217  Q
    ||| |  |||| || | | ||||| ||| |||||| |||||||||||||    
T  49336741 gtgtggtgtctctctttttttgtgcggttgttctatcctcaatgtggat 49336693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 41359904 - 41359774
Alignment:
Q  85 tcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcgacgtctttc 183  Q
    ||||| |||||||| || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| | ||||||||| | || | ||||| ||    
T  41359904 tcccacatcggatacaatagtaaaggtt-gaataccttataagtaagaggacccataaacccattgccttaaggttttgggtaagaatgtggcgtctctc 41359806  T
Q  184 tctcttgtggggtagttctaacctcaatgtgg 215  Q
    || |||||| ||| |||||| |||| ||||||    
T  41359805 tcgcttgtgtggttgttctagcctcgatgtgg 41359774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 45901718 - 45901808
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || |  ||| | ||||| |||||||||||||||||||  |||||||||| ||||||||||||    
T  45901718 gtgtgagttatatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaagaggacgcataaactcatggccttaaagttt 45901808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 52634681 - 52634789
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||| || |||||||| |||||  |||||||||||||| |||| |||||| ||||||||||| | ||||||||| |    
T  52634681 gtgtgagttatatgtcccacatcggataaaacagtaaagg-ttgaacgccttataagtaaga-gacccataaacccattgccttaaggttttgggtaaga 52634778  T
Q  170 gtgcgacgtct 180  Q
    ||| |||||||    
T  52634779 gtgtgacgtct 52634789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 29644734 - 29644583
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| |||||||  || |||||||||| ||| |||||||||||||||| ||| |||||| ||||| ||||| | ||||||||| |    
T  29644734 gtgtgagttatatgtcccacatcggattaaagagtaaaggtt-gaacaccttataagtaagagaacccataaacccattgtcttaaggttttgggtaaga 29644636  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| | ||||| |||  ||| || ||| ||| || | || |||||||||||||    
T  29644635 gtgtggcgtctctcttgcttatgcggttgttttagcttcgatgtggatggtcc 29644583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 29645055 - 29644904
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||| |||||||||||||| |||||||| || ||||||||||  || |||||||||||||||||||| |||||| ||||| ||||| | ||||||||| |    
T  29645055 gtgtaagttatatgtcccacatcggataaaagagtaaaggtta-aacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaaga 29644957  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| | ||||| |||  ||| || ||| ||| || |||| ||||||| |||||    
T  29644956 gtgtggcgtctctcttgcttatgcggttgttttagcctcgatgtggacggtcc 29644904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 79 - 222
Target Start/End: Original strand, 32589716 - 32589859
Alignment:
Q  79 tatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcgacg 177  Q
    ||||||||||| ||  |||| || | |||||||| ||| |||||||||||||||||||| |||||| ||||||||||| | ||||||||| ||||||| |    
T  32589716 tatatgtcccacataagataaaataataaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatg 32589814  T
Q  178 tctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |||  |||||| ||| ||||||  ||| ||||||| |||||    
T  32589815 tctctcttgcttgtgtggttgttctaggctcgatgtggacggtcc 32589859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 33175817 - 33175725
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggacc---aataaactcattgccttaaagttt 161  Q
    |||||||||||||||| || ||| |||||||||||||||| ||||| |||||||||||||||| |||   ||||||||||| ||||||| ||||    
T  33175817 gtgtgagttatatgtctcacatcagatagaaaagtaaagg-ttgaacaccttataagtaagagaacccataataaactcatagccttaaggttt 33175725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 42342196 - 42342089
Alignment:
Q  119 ccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaacagtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggat 217  Q
    ||||||||||||||||||  |||||||||||||||||| | ||||||||| |||| | ||||| |||  |||||| ||| |||||| |||| |||||||     
T  42342196 ccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggac 42342097  T
Q  218 ggtcctcc 225  Q
    ||||||||    
T  42342096 ggtcctcc 42342089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 4823660 - 4823761
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa-agtttgggtaaca 169  Q
    |||||||||||| ||| || |||||||| || |||||| |||  || |||||||||||| ||||||| |||||||||||||||||| | ||||||||| |    
T  4823660 gtgtgagttataagtctcacatcggataaaatagtaaaagtta-aacaccttataagtaggaggacccataaactcattgccttaagattttgggtaaga 4823758  T
Q  170 gtg 172  Q
    |||    
T  4823759 gtg 4823761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 7767464 - 7767383
Alignment:
Q  74 tgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    |||||||||||||||| |||||||||||||||||||| ||| | || |||||| |||||||||  |||||| ||||| |||||    
T  7767464 tgagttatatgtcccacatcggatagaaaagtaaagg-ttggacactttataactaagaggactcataaacccattgtcttaa 7767383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 39389075 - 39389164
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| | |||||||| || |||||||| ||||| |||||| || |||||||||| |||||| ||||| ||||| ||||    
T  39389075 gtgtgagttatatgtcctacatcggataaaatagtaaagg-ttgaacaccttaaaactaagaggacccataaacccattgtcttaaggttt 39389164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 9240154 - 9240238
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    ||||||||||||||| ||| |||||||||| ||||||| |  |||| |||||||||||||||||||| |||||  |||| ||||||    
T  9240154 gtgtgagttatatgttccacatcggatagagaagtaaaag-ctgaacaccttataagtaagaggacccataaatccattaccttaa 9240238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 50612605 - 50612541
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggac 136  Q
    ||||||||||||||||||| |||||||| || |||||| | ||||| |||||||||||||||||||    
T  50612605 gtgtgagttatatgtcccacatcggataaaatagtaaa-gattgaacaccttataagtaagaggac 50612541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 54017969 - 54017905
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggac 136  Q
    ||||||||||||||||| | |||||||| || |||||||| ||||| |||||||||||||||||||    
T  54017969 gtgtgagttatatgtcctacatcggataaaagagtaaagg-ttgaacaccttataagtaagaggac 54017905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 42584970 - 42584903
Alignment:
Q  76 agttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    |||||||||||||| ||||||||||| |||||| | ||||| |||||||||||||||||| | ||||||    
T  42584970 agttatatgtcccacatcggatagaagagtaaa-gattgaacaccttataagtaagaggatccataaac 42584903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 151
Target Start/End: Original strand, 51886566 - 51886645
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgc 151  Q
    |||||||||||||||| || |||| ||| || |||||||||| ||| | | |||||||||||||||| |||||||||||||    
T  51886566 gtgtgagttatatgtctcacatcgaataaaatagtaaaggtt-gaacatcatataagtaagaggacccataaactcattgc 51886645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 53118127 - 53118064
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagagga 135  Q
    ||||||||||||||| |||||||||||| || |||||||| ||||| ||||||||||| ||||||    
T  53118127 gtgtgagttatatgttccatatcggataaaagagtaaagg-ttgaacaccttataagtgagagga 53118064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 45395806 - 45395656
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||| |||||||| ||||| |||| ||| || ||||||||||  || || ||||||||||||||| | |||||| ||||| ||||| | ||||||||| |    
T  45395806 gtgtaagttatatatcccacatcgaataaaagagtaaaggtta-aacacgttataagtaagaggatccataaacccattgtcttaatgttttgggtaaga 45395708  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtc 221  Q
    ||| |  |||| |||| |||||||||| | |||| |||| ||||||| ||||    
T  45395707 gtgtggtgtctctctcacttgtggggttgctctagcctcgatgtggagggtc 45395656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 8327909 - 8327998
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||||||| || ||||||||  |||| | |||||||||||||| ||| ||||||  | |||||||| ||||    
T  8327909 gtgtgagttatatgtcccacatcggataaaagagtaaagg-atgaatatcttataagtaagagaacccataaacgtaatgccttaaggttt 8327998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 31190022 - 31190087
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggacc 137  Q
    |||||||| |||||||||| |||||||| || |||||||||| ||| ||||||||||| ||||||||    
T  31190022 gtgtgagtgatatgtcccacatcggataaaagagtaaaggtt-gaacaccttataagttagaggacc 31190087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 39336382 - 39336293
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| ||||||||||||  |  ||| ||||| || |||||||| |||||| | ||||||||||||| |||| ||||    
T  39336382 gtgtgagttatatgtcccacatcggatagaaagttggagg-ttgaacactttataagtgagaggatccataaactcattgctttaaggttt 39336293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 54018351 - 54018190
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||||||||||||||   |||||||| || ||||||| || ||| |||||||||||||||||||| ||||||  |  ||||||| | ||||||||| |    
T  54018351 gtgtgagttatatgtcctgcatcggataaaagagtaaagatt-gaacaccttataagtaagaggacccataaacctaacgccttaaggttttgggtaaga 54018253  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcctcctgactcc 232  Q
    ||| |  |||| ||   |||||| ||| |||||| |||| ||||||  ||||| |||||||||    
T  54018252 gtgtggtgtctctcatgcttgtgtggttgttctagcctcgatgtgggcggtccccctgactcc 54018190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 3135224 - 3135137
Alignment:
Q  73 gtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| |||||||| || |||||| | ||||| ||||||||||||| || ||| |||||| || |||| ||| ||||    
T  3135224 gtgagttatatgtcccacatcggataaaatagtaaatg-ttgaacaccttataagtaaaagaacccataaacccactgccataaggttt 3135137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 37726509 - 37726572
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagagga 135  Q
    |||||||||||||||| || |||||||| || |||||| | ||||| ||||||||||||||||||    
T  37726509 gtgtgagttatatgtctcacatcggataaaatagtaaatg-ttgaataccttataagtaagagga 37726572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 52634991 - 52635046
Alignment:
Q  118 accttataagtaagaggaccaataaactcattgccttaa-agtttgggtaacagtg 172  Q
    ||||||||| |||||||||| |||||||||||||||||| | ||||||||| ||||    
T  52634991 accttataaataagaggacccataaactcattgccttaagattttgggtaagagtg 52635046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 12747905 - 12747871
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagt 105  Q
    ||||||||||||||||||| |||||||||||||||    
T  12747905 gtgtgagttatatgtcccacatcggatagaaaagt 12747871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 32462712 - 32462622
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| |||| ||  || |||||| | ||||| ||||||||||||||| || | ||||||  ||||| |||| ||||    
T  32462712 gtgtgagttatatgtcccacatcgaatgaaagagtaaaaggttgaacaccttataagtaagatgatccataaacctattgctttaaggttt 32462622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 33362449 - 33362362
Alignment:
Q  71 gtgtgagttatatg---tcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    ||||||||||||||   || ||| ||||||| || | |||||||| ||| |||||||||||||||||||| |||||| |||| ||||||    
T  33362449 gtgtgagttatatgatatctcatgtcggataaaataataaaggtt-gaataccttataagtaagaggacccataaacccatttccttaa 33362362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 36986101 - 36986040
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagag 133  Q
    ||||||||||||||||||| |||| |||||||||| |||| |||| ||| |||||||| ||||    
T  36986101 gtgtgagttatatgtcccacatcgaatagaaaagtgaagg-ttgagaactttataagtgagag 36986040  T

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Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 37011540 - 37011479
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagag 133  Q
    ||||||||||||||||||| |||| |||||||||| |||| |||| ||| |||||||| ||||    
T  37011540 gtgtgagttatatgtcccacatcgaatagaaaagtgaagg-ttgagaactttataagtgagag 37011479  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 112
Target Start/End: Original strand, 22304251 - 22304292
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtt 112  Q
    ||||||||||||||||||| |||||||| || ||||||||||    
T  22304251 gtgtgagttatatgtcccacatcggataaaatagtaaaggtt 22304292  T

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Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 39914257 - 39914329
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    |||||||||||||||| || ||| |||| || |||| ||| ||||| ||||||||| |||||||||| ||||||    
T  39914257 gtgtgagttatatgtctcacatcagataaaacagtagagg-ttgaacaccttataaataagaggacccataaac 39914329  T

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Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 3384417 - 3384330
Alignment:
Q  73 gtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||| ||  |||| || |||| |||||  || || ||||||| ||||||||| ||||||| | |||||||||||||    
T  3384417 gtgagttatatgtcccacatatgataaaacagtataggtta-aacactttataaggaagaggacccataaacttaatgccttaaagttt 3384330  T

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Target: scaffold0078 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 5362 - 5446
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    ||||||||||||||| ||| ||||||||||| |||||||||| ||| |||||||||||||||||||| |||||| |||||||||||    
T  5362 gtgtgagttatatgttccacatcggatagaacagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaa 5446  T

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Target: scaffold0078; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 4987 - 5070
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcctta 155  Q
    |||||| ||||||||| || |||||| |||| ||||||||||| || | ||||||||||| | |||| |||||||||||||||||    
T  4987 gtgtgaattatatgtctcacatcggagagaacagtaaaggttt-aatatcttataagtaaaaagacccataaactcattgcctta 5070  T

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Target: scaffold0702 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 667 - 516
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    ||||||||||||||||||| ||||| || || |||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| | ||||||||| |    
T  667 gtgtgagttatatgtcccacatcggttaaaagagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 569  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
    ||| |  ||||||||  |||| | |||  ||||| |||| ||||||| |||||    
T  568 gtgtggtgtctttcttgcttgagtggtttttctagcctcgatgtggaaggtcc 516  T

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Target: scaffold0702; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 138
Target Start/End: Complemental strand, 295 - 229
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggacca 138  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||||    
T  295 gtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggacca 229  T

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Target: scaffold0734 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 5782 - 5866
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 156  Q
    |||||||||||||||| || |||||||| || |||||||||| ||| |||||||||||||||||||| |||||| |||||||||||    
T  5782 gtgtgagttatatgtcgcacatcggataaaatagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaa 5866  T

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Target: scaffold0734; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 215
Target Start/End: Original strand, 5401 - 5546
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag--tttgggtaac 168  Q
    ||||||||||||||||| | |||||||| || |||||||| ||||| ||||||||||||||||| || ||||||  |||| |||||||  |||||||||     
T  5401 gtgtgagttatatgtcctacatcggataaaatagtaaagg-ttgaacaccttataagtaagagggcccataaacatattgtcttaaagtttttgggtaag 5499  T
Q  169 agtgcgacgtctttctctcttgtggggtagttctaacctcaatgtgg 215  Q
    |||| |  |||| |||  |||||||||| |||| | |||| ||||||    
T  5500 agtgtggtgtctctcttgcttgtggggttgttcaagcctcgatgtgg 5546  T

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Target: scaffold0391 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 1259 - 1170
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    ||||||||||||||||||| || ||||| || |||||||| ||||| |||||||||| || |||||  |||||| ||||||||||| ||||    
T  1259 gtgtgagttatatgtcccacattggataaaagagtaaagg-ttgaacaccttataagaaaaaggactcataaacccattgccttaaggttt 1170  T

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Target: scaffold0391; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 112
Target Start/End: Complemental strand, 3138 - 3097
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtt 112  Q
    ||||||||||||||||||| |||||||| || ||||||||||    
T  3138 gtgtgagttatatgtcccacatcggataaaagagtaaaggtt 3097  T

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Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 17609 - 17520
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaagttt 161  Q
    |||||||||||||||| || ||| |||| || |||||||||| ||| ||||| |||||||||||||| |||||| ||| ||||||| ||||    
T  17609 gtgtgagttatatgtcacacatcagataaaatagtaaaggtt-gaacaccttgtaagtaagaggacccataaacccatagccttaaggttt 17520  T

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Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 47365 - 47516
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaaag-tttgggtaaca 169  Q
    |||||| ||| ||||| || ||| |||| || ||||||| |||||| |||||||||||||||| | | |||||| ||||||||||||| ||||||||| |    
T  47365 gtgtgaattaaatgtctcacatccgataaaatagtaaag-tttgaacaccttataagtaagagaatccataaacccattgccttaaagttttgggtaaaa 47463  T
Q  170 gtgcgacgtctttctctcttgtggggtagttctaacctcaatgtggatggtcc 222  Q
     || |  |||| |||  |||| | ||| ||||||||||| ||||||| |||||    
T  47464 atgtggtgtctctcttgcttgcgcggttgttctaacctcgatgtggacggtcc 47516  T

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Target: scaffold0504 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 10264 - 10192
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaac 144  Q
    |||||||||||||||| || |||||||| ||  ||||| ||| ||| |||||||||||||||||||| ||||||    
T  10264 gtgtgagttatatgtctcacatcggataaaatggtaaaagtt-gaacaccttataagtaagaggacccataaac 10192  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 39843 - 39877
Alignment:
Q  71 gtgtgagttatatgtcccatatcggatagaaaagt 105  Q
    ||||||||||||||||||| |||||||||||||||    
T  39843 gtgtgagttatatgtcccacatcggatagaaaagt 39877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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