View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14349_low_17 (Length: 516)

Name: NF14349_low_17
Description: NF14349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14349_low_17
NF14349_low_17
[»] chr5 (37 HSPs)
chr5 (20-509)||(22863571-22864054)
chr5 (218-322)||(29096296-29096403)
chr5 (213-322)||(19058992-19059104)
chr5 (216-311)||(26302493-26302590)
chr5 (213-322)||(40339088-40339199)
chr5 (214-263)||(18872517-18872566)
chr5 (213-323)||(8015830-8015943)
chr5 (213-264)||(22599984-22600035)
chr5 (212-322)||(27219551-27219664)
chr5 (212-263)||(33800887-33800938)
chr5 (212-263)||(42801491-42801542)
chr5 (209-263)||(9176836-9176890)
chr5 (213-263)||(29050795-29050845)
chr5 (213-322)||(32158402-32158514)
chr5 (213-263)||(36888143-36888193)
chr5 (226-331)||(42455373-42455481)
chr5 (213-329)||(2029109-2029228)
chr5 (212-260)||(29329017-29329065)
chr5 (281-329)||(42070454-42070502)
chr5 (214-261)||(7645154-7645201)
chr5 (212-259)||(18477997-18478044)
chr5 (213-323)||(20945878-20945991)
chr5 (212-263)||(21959429-21959480)
chr5 (217-260)||(29841347-29841390)
chr5 (213-263)||(10508575-10508625)
chr5 (228-314)||(13754016-13754105)
chr5 (219-261)||(27440350-27440392)
chr5 (213-263)||(29106088-29106138)
chr5 (213-263)||(29266063-29266113)
chr5 (213-263)||(42595736-42595786)
chr5 (213-263)||(43404377-43404427)
chr5 (213-322)||(1244715-1244827)
chr5 (245-326)||(9408934-9409018)
chr5 (213-258)||(21017661-21017706)
chr5 (211-263)||(2411344-2411396)
chr5 (227-263)||(6561907-6561943)
chr5 (212-263)||(33729771-33729823)
[»] chr8 (41 HSPs)
chr8 (213-326)||(4798525-4798641)
chr8 (212-322)||(10970260-10970373)
chr8 (213-330)||(6064372-6064492)
chr8 (213-321)||(15042354-15042465)
chr8 (213-322)||(17987437-17987549)
chr8 (213-322)||(23857311-23857424)
chr8 (216-322)||(24074504-24074613)
chr8 (212-263)||(24608533-24608584)
chr8 (212-263)||(28465612-28465663)
chr8 (212-263)||(39484420-39484471)
chr8 (213-263)||(9524952-9525002)
chr8 (213-331)||(34073218-34073339)
chr8 (228-316)||(40329598-40329690)
chr8 (213-329)||(43468686-43468805)
chr8 (213-263)||(17980277-17980327)
chr8 (213-263)||(27558920-27558970)
chr8 (213-326)||(31373315-31373431)
chr8 (217-263)||(43847701-43847747)
chr8 (213-258)||(14010827-14010872)
chr8 (269-322)||(26900473-26900526)
chr8 (213-258)||(29108657-29108702)
chr8 (213-258)||(41225720-41225765)
chr8 (213-322)||(7649524-7649635)
chr8 (218-318)||(37219505-37219608)
chr8 (213-261)||(40249932-40249980)
chr8 (212-263)||(2376512-2376563)
chr8 (212-263)||(25119202-25119253)
chr8 (228-263)||(27822080-27822115)
chr8 (213-263)||(3379696-3379746)
chr8 (213-263)||(5184937-5184987)
chr8 (213-263)||(8682376-8682426)
chr8 (215-326)||(10292348-10292463)
chr8 (213-263)||(13762562-13762612)
chr8 (217-263)||(25689438-25689484)
chr8 (213-263)||(27868701-27868751)
chr8 (213-263)||(29514205-29514255)
chr8 (213-329)||(1032942-1033060)
chr8 (213-257)||(9737416-9737460)
chr8 (245-326)||(14683904-14683987)
chr8 (213-257)||(25689503-25689547)
chr8 (216-331)||(44070347-44070465)
[»] chr2 (37 HSPs)
chr2 (213-322)||(580771-580883)
chr2 (212-326)||(31564089-31564200)
chr2 (205-325)||(17239888-17240011)
chr2 (226-322)||(32891289-32891388)
chr2 (216-321)||(36665428-36665536)
chr2 (213-326)||(2114419-2114535)
chr2 (214-322)||(20122463-20122574)
chr2 (214-322)||(17115532-17115643)
chr2 (211-263)||(25050290-25050342)
chr2 (213-320)||(30474185-30474295)
chr2 (226-322)||(44721692-44721791)
chr2 (272-331)||(18255678-18255737)
chr2 (212-326)||(22297436-22297553)
chr2 (213-322)||(8234780-8234892)
chr2 (213-322)||(3179319-3179431)
chr2 (213-326)||(7086248-7086364)
chr2 (216-261)||(10207643-10207688)
chr2 (212-263)||(15690084-15690135)
chr2 (213-263)||(10262734-10262784)
chr2 (212-322)||(15392199-15392312)
chr2 (213-322)||(17154644-17154756)
chr2 (217-263)||(41699101-41699147)
chr2 (215-322)||(11133072-11133183)
chr2 (215-326)||(29664599-29664714)
chr2 (216-260)||(36481067-36481111)
chr2 (212-263)||(22538533-22538584)
chr2 (216-263)||(26807134-26807181)
chr2 (213-263)||(16973903-16973953)
chr2 (213-263)||(36520830-36520880)
chr2 (216-322)||(44422105-44422214)
chr2 (213-258)||(1836583-1836628)
chr2 (214-263)||(18364425-18364474)
chr2 (210-263)||(27495530-27495583)
chr2 (214-263)||(32988346-32988395)
chr2 (210-263)||(37245370-37245423)
chr2 (212-256)||(20128564-20128608)
chr2 (212-260)||(34620512-34620560)
[»] chr1 (43 HSPs)
chr1 (213-329)||(42831942-42832061)
chr1 (213-329)||(29331145-29331264)
chr1 (226-322)||(15368813-15368912)
chr1 (213-329)||(18923866-18923985)
chr1 (213-326)||(34560322-34560437)
chr1 (209-326)||(21884566-21884686)
chr1 (214-322)||(48110525-48110636)
chr1 (216-263)||(8261725-8261772)
chr1 (212-320)||(24661976-24662087)
chr1 (212-263)||(38019998-38020049)
chr1 (213-322)||(37490885-37490997)
chr1 (213-322)||(39433353-39433465)
chr1 (213-326)||(27745152-27745268)
chr1 (217-326)||(43555858-43555970)
chr1 (212-322)||(3532962-3533074)
chr1 (213-321)||(15774301-15774412)
chr1 (213-319)||(4354096-4354205)
chr1 (216-263)||(4429532-4429579)
chr1 (212-263)||(20357454-20357505)
chr1 (212-263)||(20562450-20562501)
chr1 (213-263)||(5172652-5172702)
chr1 (213-263)||(9408664-9408714)
chr1 (213-263)||(23930594-23930644)
chr1 (213-322)||(46116162-46116274)
chr1 (210-331)||(49606676-49606801)
chr1 (213-317)||(23463979-23464086)
chr1 (212-261)||(33059544-33059593)
chr1 (211-263)||(6225665-6225716)
chr1 (213-257)||(12073133-12073177)
chr1 (216-322)||(12553191-12553303)
chr1 (218-322)||(19793526-19793633)
chr1 (215-258)||(29442022-29442065)
chr1 (245-329)||(32711125-32711211)
chr1 (212-263)||(40814816-40814867)
chr1 (213-260)||(49010753-49010800)
chr1 (208-263)||(49251445-49251500)
chr1 (213-263)||(538379-538429)
chr1 (213-262)||(11067434-11067483)
chr1 (213-262)||(30649088-30649137)
chr1 (214-263)||(43837451-43837500)
chr1 (289-329)||(4429463-4429503)
chr1 (278-326)||(9527489-9527537)
chr1 (213-261)||(12866118-12866166)
[»] chr4 (44 HSPs)
chr4 (213-322)||(20753113-20753225)
chr4 (213-322)||(33944351-33944463)
chr4 (211-322)||(5430352-5430467)
chr4 (216-321)||(32885686-32885794)
chr4 (226-326)||(10098133-10098236)
chr4 (211-326)||(3465576-3465694)
chr4 (212-326)||(9285643-9285760)
chr4 (213-319)||(45350271-45350380)
chr4 (213-319)||(45359750-45359859)
chr4 (213-318)||(47017938-47018046)
chr4 (213-294)||(46734985-46735069)
chr4 (206-263)||(50657868-50657925)
chr4 (212-319)||(24234065-24234175)
chr4 (212-263)||(21476131-21476182)
chr4 (212-325)||(34773668-34773784)
chr4 (216-321)||(12856182-12856290)
chr4 (213-329)||(31601801-31601920)
chr4 (213-262)||(50783485-50783534)
chr4 (213-268)||(53291437-53291493)
chr4 (212-263)||(548937-548988)
chr4 (219-326)||(52608552-52608661)
chr4 (212-323)||(55656095-55656209)
chr4 (212-263)||(56546499-56546550)
chr4 (213-263)||(9172421-9172471)
chr4 (213-322)||(31578014-31578124)
chr4 (245-331)||(35451100-35451189)
chr4 (217-262)||(35031382-35031427)
chr4 (212-321)||(43606089-43606201)
chr4 (226-326)||(51077875-51077979)
chr4 (214-263)||(52560760-52560809)
chr4 (214-263)||(55266485-55266534)
chr4 (216-333)||(56314759-56314879)
chr4 (213-261)||(4722516-4722564)
chr4 (217-257)||(26203843-26203883)
chr4 (212-263)||(20266856-20266907)
chr4 (213-260)||(52743223-52743270)
chr4 (213-263)||(9924851-9924901)
chr4 (210-260)||(13211405-13211455)
chr4 (214-263)||(534815-534864)
chr4 (226-263)||(6053988-6054025)
chr4 (215-263)||(9692958-9693007)
chr4 (214-263)||(27921892-27921941)
chr4 (216-260)||(3544485-3544529)
chr4 (227-263)||(47416477-47416513)
[»] chr3 (43 HSPs)
chr3 (213-322)||(33206752-33206864)
chr3 (226-321)||(36727452-36727549)
chr3 (212-322)||(49639022-49639135)
chr3 (213-322)||(13616062-13616174)
chr3 (213-322)||(43566784-43566896)
chr3 (214-326)||(49146080-49146195)
chr3 (213-326)||(54983689-54983809)
chr3 (235-329)||(31698550-31698647)
chr3 (213-322)||(42832050-42832156)
chr3 (213-331)||(35483264-35483385)
chr3 (224-318)||(47062059-47062155)
chr3 (213-321)||(14417863-14417974)
chr3 (229-326)||(53467960-53468059)
chr3 (212-263)||(2564915-2564966)
chr3 (212-263)||(16278001-16278052)
chr3 (218-321)||(32876105-32876211)
chr3 (218-261)||(51399950-51399993)
chr3 (213-263)||(17440015-17440065)
chr3 (213-263)||(24751310-24751360)
chr3 (213-263)||(42271063-42271113)
chr3 (213-262)||(8958358-8958407)
chr3 (213-326)||(13874818-13874933)
chr3 (272-329)||(14271908-14271965)
chr3 (217-262)||(34503214-34503259)
chr3 (217-322)||(40786279-40786387)
chr3 (212-331)||(41121865-41121991)
chr3 (216-321)||(48173284-48173392)
chr3 (210-261)||(26366267-26366319)
chr3 (213-321)||(32508783-32508894)
chr3 (228-319)||(23820639-23820733)
chr3 (214-260)||(32665277-32665323)
chr3 (213-263)||(50724363-50724412)
chr3 (213-263)||(50788436-50788485)
chr3 (212-261)||(8475409-8475458)
chr3 (214-263)||(13540014-13540063)
chr3 (218-263)||(19117458-19117503)
chr3 (213-262)||(19540336-19540385)
chr3 (226-263)||(20244142-20244179)
chr3 (212-261)||(21420241-21420290)
chr3 (226-263)||(35849329-35849366)
chr3 (213-258)||(50720417-50720462)
chr3 (213-258)||(50792386-50792431)
chr3 (214-263)||(53870830-53870879)
[»] chr7 (47 HSPs)
chr7 (247-327)||(39969026-39969109)
chr7 (213-295)||(36315989-36316074)
chr7 (212-326)||(45198082-45198199)
chr7 (212-326)||(22741197-22741316)
chr7 (209-326)||(22965942-22966062)
chr7 (218-322)||(4590599-4590701)
chr7 (213-322)||(22706016-22706128)
chr7 (213-263)||(25818281-25818331)
chr7 (213-263)||(29778976-29779026)
chr7 (213-322)||(34948101-34948213)
chr7 (213-326)||(42887149-42887265)
chr7 (219-295)||(27047730-27047809)
chr7 (213-263)||(8195910-8195960)
chr7 (213-263)||(30644164-30644214)
chr7 (213-263)||(38778729-38778779)
chr7 (213-263)||(44437875-44437925)
chr7 (213-263)||(49012393-49012443)
chr7 (226-263)||(924342-924379)
chr7 (233-326)||(4042252-4042348)
chr7 (213-318)||(7262990-7263098)
chr7 (229-314)||(8724391-8724479)
chr7 (218-263)||(22047520-22047565)
chr7 (213-262)||(28694237-28694286)
chr7 (212-322)||(27907884-27907994)
chr7 (213-261)||(34962024-34962072)
chr7 (277-329)||(44843753-44843805)
chr7 (216-263)||(2261534-2261581)
chr7 (212-263)||(46337918-46337969)
chr7 (217-260)||(47552212-47552255)
chr7 (213-259)||(4818015-4818061)
chr7 (213-263)||(17900929-17900979)
chr7 (213-263)||(21086099-21086149)
chr7 (213-263)||(23685604-23685654)
chr7 (213-263)||(29710150-29710200)
chr7 (213-263)||(30741559-30741609)
chr7 (210-260)||(30748018-30748068)
chr7 (213-263)||(32387175-32387225)
chr7 (219-261)||(46716334-46716376)
chr7 (214-263)||(5787457-5787506)
chr7 (215-263)||(14818415-14818464)
chr7 (215-263)||(15265413-15265462)
chr7 (215-322)||(21285341-21285452)
chr7 (213-257)||(21925470-21925514)
chr7 (219-263)||(24479584-24479628)
chr7 (213-327)||(25711113-25711231)
chr7 (215-263)||(37917389-37917437)
chr7 (213-261)||(43970905-43970953)
[»] chr6 (27 HSPs)
chr6 (213-322)||(12089092-12089204)
chr6 (217-326)||(12127893-12128005)
chr6 (212-331)||(7563555-7563677)
chr6 (213-326)||(10377108-10377224)
chr6 (213-326)||(22389734-22389850)
chr6 (214-331)||(35190759-35190879)
chr6 (213-322)||(9491723-9491835)
chr6 (213-326)||(22501013-22501130)
chr6 (212-260)||(19642600-19642648)
chr6 (248-326)||(6530188-6530269)
chr6 (213-263)||(6025436-6025486)
chr6 (213-263)||(11982757-11982807)
chr6 (217-263)||(16269767-16269813)
chr6 (213-326)||(30566053-30566169)
chr6 (212-261)||(32057028-32057077)
chr6 (213-321)||(34365730-34365841)
chr6 (213-329)||(21507183-21507301)
chr6 (219-322)||(25020516-25020622)
chr6 (216-263)||(5288395-5288442)
chr6 (213-263)||(19417817-19417867)
chr6 (213-263)||(34396078-34396128)
chr6 (212-257)||(8233080-8233125)
chr6 (213-262)||(16801784-16801833)
chr6 (214-263)||(34792894-34792942)
chr6 (213-261)||(18244064-18244112)
chr6 (212-260)||(24623516-24623564)
chr6 (219-263)||(31741513-31741557)
[»] scaffold0039 (1 HSPs)
scaffold0039 (213-263)||(101826-101876)
[»] scaffold1086 (1 HSPs)
scaffold1086 (213-326)||(2483-2599)
[»] scaffold0008 (1 HSPs)
scaffold0008 (218-262)||(43747-43791)
[»] scaffold0191 (1 HSPs)
scaffold0191 (220-263)||(16849-16892)
[»] scaffold0006 (1 HSPs)
scaffold0006 (212-263)||(159008-159059)
[»] scaffold0021 (1 HSPs)
scaffold0021 (211-264)||(111746-111799)
[»] scaffold0002 (1 HSPs)
scaffold0002 (277-321)||(451364-451408)


Alignment Details
Target: chr5 (Bit Score: 280; Significance: 1e-156; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 20 - 509
Target Start/End: Original strand, 22863571 - 22864054
Alignment:
Q  20 tttatgtgtttaagaatgaataagataaggtagtgaaagaagaggagataagttttgtaggggacggaataggtttatttgatgttaaggtggttttgta 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863571 tttatgtgtttaagaatgaataagataaggtagtgaaagaagaggagataagttttgtaggggacggaataggtttatttgatgttaaggtggttttgta 22863670  T
Q  120 tgtgactttgtgttgggtttatttctatttatacatggaatttttaaggnnnnnnnnnnnnncaaacaggaaagggtaaaatatgtatgatgagtcccgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||             |||| ||||||||||||||||||||||||||||||  |    
T  22863671 tgtgactttgtgttgggtttatttctatttatacatggaatttttaaggaaaaaagaaaaaacaaataggaaagggtaaaatatgtatgatgagtcctct 22863770  T
Q  220 gagcacagctcagttggtaggatagtgcattattatatgc-agggtcggatcaaacctcggacaccacatttattcattttgtaagatgaattctagcca 318  Q
    |||||||| ||||||||||||| | ||||||||||||||| || ||||||||||| |    ||| | || |||||||| || |||| | |||| ||||||    
T  22863771 gagcacagttcagttggtaggacaatgcattattatatgcaagagtcggatcaaatcctaaacatctcacttattcatcttataaggttaattttagcca 22863870  T
Q  319 ctagactatctaattnnnnnnnttaaaatatgcatgatgaaaattgaaataaggaccgaaaaagagagtttttgtgagaaagagaagtaggggtttgagc 418  Q
    ||||||||||| |           |||| ||| || |||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  22863871 ctagactatctga------aaaaaaaaaaatgtataatgaaaattgaaataaggactgaaaaagagtg-ttttgtgagaaagagaagtaggggtttgagc 22863963  T
Q  419 ggacatcccaatgagaagtgaagtgtgtgaaaatatggaacacacctagaacaccctaacaggggacccatatggattgcacttgcctttg 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||    
T  22863964 ggacatcccaatgagaagtgaagtgtgtgaaaatatggaacacacctagaacaccctcataggggacccatatggattgcacttgtctttg 22864054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 29096403 - 29096296
Alignment:
Q  218 gtgagcacagctcagttggtaggatagtgcattattatatgc-agggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattcta 314  Q
    ||||||| |||||||||||||||| | ||||||||||||||| |||| ||||  || |||| |||||||| || |||||||  || |||| |||||||||    
T  29096403 gtgagcatagctcagttggtaggacaatgcattattatatgcaagggccggagttcgaaccccggacaccccacttattcaccttataaggtgaattcta 29096304  T
Q  315 gccactag 322  Q
    ||||||||    
T  29096303 gccactag 29096296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 19059104 - 19058992
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | |||||||| |||||||||| |   || || ||||  ||||||| || |||||||  || |||| ||||    
T  19059104 gtcccgtgagcatagctcagttggtaggacaatgcattatcatatgcaggggccggggttcgaaccctggacaccccacttattcaccttataaggtgaa 19059005  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  19059004 ttctagccactag 19058992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 311
Target Start/End: Complemental strand, 26302590 - 26302493
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaatt 311  Q
    ||||||||| ||||| |||||||||| | ||||||||||||| ||||| ||||  || ||||||||||||| || |||||||| || |||| ||||||    
T  26302590 ccgtgagcatagctcggttggtaggacaatgcattattatatacagggccggagttcgaacctcggacaccccacttattcatcttataaggtgaatt 26302493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 40339199 - 40339088
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| ||||||||| |||||| | ||||||||||||||||||| |   || || ||||| |||||||  |||||||||  || |||| ||||    
T  40339199 gtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggggccggggttcgaacct-ggacacccaatttattcaccttataaggtgaa 40339101  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  40339100 ttctagccactag 40339088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 18872517 - 18872566
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  18872517 tcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggg 18872566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 323
Target Start/End: Original strand, 8015830 - 8015943
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| | |||||| ||||||||| |||||||||| |||||||| |   || || |||| |||||||| || |||||||  || |||| ||||    
T  8015830 gtcccgtgagcatatctcagtcggtaggataatgcattattacatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaa 8015929  T
Q  310 ttctagccactaga 323  Q
    ||||| ||||||||    
T  8015930 ttctacccactaga 8015943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 22600035 - 22599984
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggt 264  Q
    |||||||||||| | |||||||||||||| | ||||||||||||||||||||    
T  22600035 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcagggt 22599984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 27219664 - 27219551
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    ||||||||||||| |||| ||||||||||| | |||||||||||||||| || |   || ||||||| || ||||| || |||||||  |  |||| |||    
T  27219664 agtcccgtgagcatagcttagttggtaggacaatgcattattatatgcatgggccggggttcaaaccccgtacaccccacttattcacctaataaggtga 27219565  T
Q  309 attctagccactag 322  Q
    ||||||||||||||    
T  27219564 attctagccactag 27219551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 33800887 - 33800938
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| | |||||||||||||| | |||||||||||||||||||    
T  33800887 agtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggg 33800938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 42801542 - 42801491
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||| || ||||||||||||| |||| |||||||||||||||||||    
T  42801542 agtcccgtgatcatagctcagttggtatgataatgcattattatatgcaggg 42801491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 9176890 - 9176836
Alignment:
Q  209 atgagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||||||| | ||||||||| |||| | |||||||||||||||||||    
T  9176890 atgagtcccgtgagcataactcagttggaaggacaatgcattattatatgcaggg 9176836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 29050795 - 29050845
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||| ||||| |||||||||||||||| | |||||||||||||||||||    
T  29050795 gtcccgcgagcatagctcagttggtaggacaatgcattattatatgcaggg 29050845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 32158514 - 32158402
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||  |||||| ||||||||| | ||||||||||||||||||| |   || || |||| || ||||| || |||||||  || |||| ||||    
T  32158514 gtcccgtgagcttagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttattcaccttataaggtgaa 32158415  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  32158414 ttctagccactag 32158402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 36888193 - 36888143
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| | |||||||||||||| | |||||||||||||||||||    
T  36888193 gtcccgtgagcatatctcagttggtaggacaatgcattattatatgcaggg 36888143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 331
Target Start/End: Complemental strand, 42455481 - 42455373
Alignment:
Q  226 agctcagttggtaggatagtgcattattatatgcagggtc-gga--tcaaacctcggacaccacatttattcattttgtaagatgaattctagccactag 322  Q
    |||||||||||||||| | ||||||||||||||||||| | |||  || |||| |||||||  || |||||||  || |||| |||||||||||||||||    
T  42455481 agctcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacactccacttattcaccttataaggtgaattctagccactag 42455382  T
Q  323 actatctaa 331  Q
     ||| ||||    
T  42455381 gctacctaa 42455373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 329
Target Start/End: Complemental strand, 2029228 - 2029109
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| | || ||||||||||| | || |||||||||||||||| ||||   || |||| || ||||| || |||||||  || |||| ||||    
T  2029228 gtcccgtgagcataacttagttggtaggacaatgtattattatatgcaggggtcgggattcgaaccccgaacaccccacttattcaccttataaggtgaa 2029129  T
Q  310 ttctagccactagactatct 329  Q
    ||||||||||||| ||||||    
T  2029128 ttctagccactaggctatct 2029109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 29329017 - 29329065
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    ||||||||||||| ||||||||||||| |||| |||||||| |||||||    
T  29329017 agtcccgtgagcatagctcagttggtaagataatgcattatcatatgca 29329065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 42070502 - 42070454
Alignment:
Q  281 caccacatttattcattttgtaagatgaattctagccactagactatct 329  Q
    |||| |||||||||| ||| |||| ||||||||||||||||||||||||    
T  42070502 cacctcatttattcactttataaggtgaattctagccactagactatct 42070454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 7645201 - 7645154
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    ||||||||||| |||| ||||||||||| | |||||||||||||||||    
T  7645201 tcccgtgagcatagcttagttggtaggacaatgcattattatatgcag 7645154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 18477997 - 18478044
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgc 259  Q
    |||| |||||||| |||||||||||||||| | |||||||||||||||    
T  18477997 agtctcgtgagcatagctcagttggtaggacaatgcattattatatgc 18478044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 323
Target Start/End: Complemental strand, 20945991 - 20945878
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| | |||| ||||||||| | ||||||||||||||||||| |   || || ||   |||||||| || |||||||  || |||| ||||    
T  20945991 gtcccgtgagcataactcaattggtaggacaatgcattattatatgcaggggccggggttcgaaatccggacaccccacttattcaccttataaggtgaa 20945892  T
Q  310 ttctagccactaga 323  Q
    ||||||||||||||    
T  20945891 ttctagccactaga 20945878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 21959480 - 21959429
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| ||||||||| |||| ||| ||||||||| |||||||||    
T  21959480 agtcccgtgagcatagctcagttagtagaataatgcattattttatgcaggg 21959429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 29841347 - 29841390
Alignment:
Q  217 cgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    |||||||| |||||||||||||||| | ||||||||||||||||    
T  29841347 cgtgagcatagctcagttggtaggacaatgcattattatatgca 29841390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 10508575 - 10508625
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||| || |||||||||||||||| | || ||||||||||||||||    
T  10508575 gtcccgtgaacatagctcagttggtaggacaatgtattattatatgcaggg 10508625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 13754016 - 13754105
Alignment:
Q  228 ctcagttggtaggatagtgcattattatatgcaggg-tcg--gatcaaacctcggacaccacatttattcattttgtaagatgaattcta 314  Q
    |||||||||||||| | | ||||||||||||||||| |||  | || ||| ||||||||| ||||||||||| || |||| |||||||||    
T  13754016 ctcagttggtaggacaatacattattatatgcaggggtcgatgttcgaacgtcggacaccccatttattcatcttataaggtgaattcta 13754105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 27440392 - 27440350
Alignment:
Q  219 tgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    |||||| |||||||||||||||| | |||||||||||||||||    
T  27440392 tgagcatagctcagttggtaggacaatgcattattatatgcag 27440350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 29106138 - 29106088
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||| ||||||| |||||| ||||||||| | |||||||||||||||||||    
T  29106138 gtcctgtgagcatagctcaattggtaggacaatgcattattatatgcaggg 29106088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 29266063 - 29266113
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||| ||| ||||| | |||||||||||||||||||    
T  29266063 gtcccgtgagcatagctcaattgataggacaatgcattattatatgcaggg 29266113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 42595736 - 42595786
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||| ||||||||| | | |||||||||||||||||    
T  42595736 gtcccgtgagcatagctcaattggtaggacaatacattattatatgcaggg 42595786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 43404377 - 43404427
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||| |||||| |||||||||||||||| | ||||||||| |||||||||    
T  43404377 gtcccttgagcatagctcagttggtaggacaatgcattattgtatgcaggg 43404427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 1244827 - 1244715
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tc--ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||| ||||||| ||| |||||||||||| |  |||||||||||||||||| ||  || || |||| | |||||| || |||||||  || |||| ||||    
T  1244827 gtcctgtgagcatagcacagttggtaggacaaagcattattatatgcaggggtcagggttcgaaccccagacaccccacttattcaccttataaggtgaa 1244728  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  1244727 ttctagccactag 1244715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 9409018 - 9408934
Alignment:
Q  245 tgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattctagccactagacta 326  Q
    |||||| |||||||||||| |||||  || |||| |||||||| ||||||||||  || |||||||||||||| |||||| ||||    
T  9409018 tgcattgttatatgcaggggtcggagttcgaaccccggacacctcatttattcaacttataagatgaattctaaccactaaacta 9408934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 21017706 - 21017661
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatg 258  Q
    ||||||||| || |||||||||||||||| | ||||||||||||||    
T  21017706 gtcccgtgaacatagctcagttggtaggacaatgcattattatatg 21017661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 2411396 - 2411344
Alignment:
Q  211 gagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||| || |||| |||||||||||||||| | || ||||||||||||||||    
T  2411396 gagtcctgtaagcatagctcagttggtaggacaatgtattattatatgcaggg 2411344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 6561907 - 6561943
Alignment:
Q  227 gctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  6561907 gctcagttggtaggataatgcattattttatgcaggg 6561943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 33729771 - 33729823
Alignment:
Q  212 agtcccgtgagcac-agctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||||  | |||||||||||||| | |||||||||||||||||||    
T  33729771 agtcccgtgagcattaactcagttggtaggacaatgcattattatatgcaggg 33729823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 4798641 - 4798525
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||| | |||||||||||||||||| ||||||||||||||||||| |   || || |||| |||||||| || |||||||  ||||||| ||||    
T  4798641 gtcccgtgagtatagctcagttggtaggataatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttgtaaggtgaa 4798542  T
Q  310 ttctagccactagacta 326  Q
    |||||||||||||||||    
T  4798541 ttctagccactagacta 4798525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 10970260 - 10970373
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||||||||||| |   || ||||||| || ||||| || |||||||  || ||||||||    
T  10970260 agtcctgtgagcatagctcagttggtaggataatgcattattatatgcaggggctggggttcaaaccccgaacaccccacttattcaccttataagatga 10970359  T
Q  309 attctagccactag 322  Q
    ||||||||||||||    
T  10970360 attctagccactag 10970373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 330
Target Start/End: Original strand, 6064372 - 6064492
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||  |||||| ||||| ||| | ||||||||||||||||||| ||||   || ||||||||||||  || |||||||  || |||| ||||    
T  6064372 gtcccgtgagcttagctcaattggttggacaatgcattattatatgcaggggtcggggttcgaacctcggacacttcacttattcagcttataaggtgaa 6064471  T
Q  310 ttctagccactagactatcta 330  Q
    |||||||||||||||||||||    
T  6064472 ttctagccactagactatcta 6064492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 15042465 - 15042354
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||| |   || || |||| |||||||| || |||||||  || |||| ||||    
T  15042465 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaa 15042366  T
Q  310 ttctagccacta 321  Q
    ||||| ||||||    
T  15042365 ttctaaccacta 15042354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 17987549 - 17987437
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||| ||| ||||  || |||| |||||||| || |||||||  || |||| ||||    
T  17987549 gtcccgtgaacatagctcagttggtaggataatgcattattatatgcaggggccggagttcgaaccccggacaccccaattattcaccttataaggtgaa 17987450  T
Q  310 ttctagccactag 322  Q
    || ||||||||||    
T  17987449 ttatagccactag 17987437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 23857424 - 23857311
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg----tcggatcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||||||      || || |||||||||||||  | |||||||| || || | |||    
T  23857424 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcagggggccggggttcgaacctcggacacccgacttattcatcttatacggtga 23857325  T
Q  309 attctagccactag 322  Q
    ||||||||||||||    
T  23857324 attctagccactag 23857311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 24074504 - 24074613
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtcgga---tcaaacctcggacaccacatttattcattttgtaagatgaattc 312  Q
    |||||| ||||||||||||||||||| | |||||||||||||| ||||   ||   || ||||||||||||| || |||||||  || |||| |||||||    
T  24074504 ccgtgatcacagctcagttggtaggacaatgcattattatatgtaggggttgaagttcgaacctcggacacctcacttattcaccttataaggtgaattc 24074603  T
Q  313 tagccactag 322  Q
    ||||||||||    
T  24074604 tagccactag 24074613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 24608584 - 24608533
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  24608584 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggg 24608533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 28465612 - 28465663
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  28465612 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggg 28465663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 39484471 - 39484420
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  39484471 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggg 39484420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 9524952 - 9525002
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  9524952 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggg 9525002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 331
Target Start/End: Complemental strand, 34073339 - 34073218
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tc--ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||  || ||||||||||||||| |||||||||||||| |||| ||  || || |||| |||||||| || |||||||  || |||| ||||    
T  34073339 gtcccgtgagcgtagttcagttggtaggataatgcattattatatgtaggggtcaaggttcgaaccccggacaccccacttattcaccttataaggtgaa 34073240  T
Q  310 ttctagccactagactatctaa 331  Q
    |||||||||| |||||| ||||    
T  34073239 ttctagccacgagactacctaa 34073218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 40329690 - 40329598
Alignment:
Q  228 ctcagttggtaggatagtgcattattatatgca-gggtcgga---tcaaacctcggacaccacatttattcattttgtaagatgaattctagc 316  Q
    |||||||||||||||| |||||||||||||||| ||||||||   || || ||||||||||  | ||||||| ||| ||||||||||||||||    
T  40329690 ctcagttggtaggataatgcattattatatgcatgggtcggaggttcgaatctcggacaccctacttattcactttataagatgaattctagc 40329598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 329
Target Start/End: Complemental strand, 43468805 - 43468686
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtc--ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | |||||| ||||||| | |||||  || || |||  |||||||| || |||||||  || |||| ||||    
T  43468805 gtcccgtgagcatagctcagttggtaggacaatgcattgttatatgtaggggtcggggttcgaactccggacaccccacttattcaccttataaggtgaa 43468706  T
Q  310 ttctagccactagactatct 329  Q
    ||||||||||||| ||||||    
T  43468705 ttctagccactaggctatct 43468686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 17980277 - 17980327
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||||||||||||| |  ||||||||||||||||||    
T  17980277 gtcccgtgagcatagctcagttggtaggacaaagcattattatatgcaggg 17980327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 27558970 - 27558920
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  27558970 gtcccgtgagcgtagctcatttggtaggataatgcattattatatgcaggg 27558920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 31373315 - 31373431
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | | |||||||||||| |||| |   || || || | |||||| | ||| ||||||  || |||| ||||    
T  31373315 gtcccgtgagcatagctcagttggtaggacattacattattatatgtaggggcagaggttcgaatcccggacatcccatatattcaccttataaggtgaa 31373414  T
Q  310 ttctagccactagacta 326  Q
    |||||||||||||||||    
T  31373415 ttctagccactagacta 31373431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 43847701 - 43847747
Alignment:
Q  217 cgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||| |||||||||||||||| | |||||||||||||||||||    
T  43847701 cgtgagcatagctcagttggtaggacaatgcattattatatgcaggg 43847747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 14010872 - 14010827
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatg 258  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||    
T  14010872 gtcccgtgagcatagctcagttggtaagacagtgcattattatatg 14010827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 26900473 - 26900526
Alignment:
Q  269 tcaaacctcggacaccacatttattcattttgtaagatgaattctagccactag 322  Q
    |||||||||||||||| ||||||||||| ||  ||| |||||||||||||||||    
T  26900473 tcaaacctcggacaccccatttattcatcttaaaaggtgaattctagccactag 26900526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 29108657 - 29108702
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatg 258  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||    
T  29108657 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 29108702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 41225765 - 41225720
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatg 258  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||    
T  41225765 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 41225720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 7649524 - 7649635
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg--tcggatcaaacctcggacaccacatttattcattttgtaagatgaat 310  Q
    |||||||||||| |||||| ||||||||| | |||||||||||||| ||||    || || ||||||| ||||| || |||||||  ||  ||| |||||    
T  7649524 gtcccgtgagcatagctcacttggtaggacaatgcattattatatgtagggctggggttcgaacctcgaacaccccacttattcaccttacaaggtgaat 7649623  T
Q  311 tctagccactag 322  Q
    ||||||||||||    
T  7649624 tctagccactag 7649635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 37219505 - 37219608
Alignment:
Q  218 gtgagcacagctcagttggtaggatagtgcattattatatgcagg-gtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattcta 314  Q
    ||||||| | |||||||||||||| | |  ||||||||||||||| || ||   ||||||| |||||||| ||||||||||  || ||||||||||||||    
T  37219505 gtgagcataactcagttggtaggacaatatattattatatgcaggtgttggggttcaaaccccggacaccccatttattcaccttataagatgaattcta 37219604  T
Q  315 gcca 318  Q
    ||||    
T  37219605 gcca 37219608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 40249980 - 40249932
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    |||||||||||| | |||||||||||||| | |||||||||||||||||    
T  40249980 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcag 40249932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 2376512 - 2376563
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| || ||| ||||||||| | |||||||||||||||||||    
T  2376512 agtcccgtgagcatagttcaattggtaggacaatgcattattatatgcaggg 2376563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 25119202 - 25119253
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| || ||| ||||||||| | |||||||||||||||||||    
T  25119202 agtcccgtgagcatagttcaattggtaggacaatgcattattatatgcaggg 25119253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 27822080 - 27822115
Alignment:
Q  228 ctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||||||| |||||||||||||||||||    
T  27822080 ctcagttggtaggataatgcattattatatgcaggg 27822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 3379746 - 3379696
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| | |||||||| ||||||| |||||| ||||||||||||    
T  3379746 gtcccgtgagcataactcagttgataggataatgcattgttatatgcaggg 3379696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 5184987 - 5184937
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||| ||||||| |||||||||||||||| | || ||||||||||||||||    
T  5184987 gtcctgtgagcatagctcagttggtaggacaatggattattatatgcaggg 5184937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 8682376 - 8682426
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||||||||||||| | | | |||||||||||||||    
T  8682376 gtcccgtgagcatagctcagttggtaggacaattctttattatatgcaggg 8682426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 326
Target Start/End: Original strand, 10292348 - 10292463
Alignment:
Q  215 cccgtgagcacagctcagttggtagg-atagtgcattattatatgcagggtcgga---tcaaacctcggacaccacatttattcattttgtaagatgaa- 309  Q
    |||||||||| ||||||||||| ||| | | ||||||||||||||||||| | ||   || ||||||||||||| || ||||||| |||  ||| ||||     
T  10292348 cccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctgagattcgaacctcggacaccccacttattcactttaaaag-tgaat 10292446  T
Q  310 ttctagccactagacta 326  Q
    |||||||||||||||||    
T  10292447 ttctagccactagacta 10292463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 13762612 - 13762562
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||| ||||||| || ||||||||||||| | |||||||||||||||||||    
T  13762612 gtcctgtgagcatagttcagttggtaggacaatgcattattatatgcaggg 13762562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 25689484 - 25689438
Alignment:
Q  217 cgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||| |||||||||||||||| | |||||||||||||| ||||    
T  25689484 cgtgagcatagctcagttggtaggacactgcattattatatgtaggg 25689438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 27868701 - 27868751
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||| |||||| |||||||||||||| ||| | |||||||||||||||||    
T  27868701 gtcccatgagcatagctcagttggtagaataatacattattatatgcaggg 27868751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 29514205 - 29514255
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||| ||||||| |||||||||||||||| | ||| |||||||||||||||    
T  29514205 gtcctgtgagcatagctcagttggtaggacaatgctttattatatgcaggg 29514255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 329
Target Start/End: Complemental strand, 1033060 - 1032942
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    ||||||||||   |||||||||||| ||| | ||||||||||||||||||| |||||  || |||| || ||||| || |||||||  || |||||||||    
T  1033060 gtcccgtgagtctagctcagttggtgggacaatgcattattatatgcaggggtcggagttcgaacc-cgaacaccccacttattcaccttataagatgaa 1032962  T
Q  310 ttctagccactagactatct 329  Q
    ||||| |||| |||| ||||    
T  1032961 ttctaaccaccagacaatct 1032942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 9737460 - 9737416
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatat 257  Q
    |||||||||||| |||||||||||||||| | | |||||||||||    
T  9737460 gtcccgtgagcatagctcagttggtaggacaatacattattatat 9737416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 245 - 326
Target Start/End: Original strand, 14683904 - 14683987
Alignment:
Q  245 tgcattattatatgcagggtc--ggatcaaacctcggacaccacatttattcattttgtaagatgaattctagccactagacta 326  Q
    |||||||||||||||||||||  || || |||| |||||| | || |||||||  || |||| |||||||||| ||||||||||    
T  14683904 tgcattattatatgcagggtcggggttcgaaccccggacatcccacttattcaccttataaggtgaattctagtcactagacta 14683987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 25689547 - 25689503
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatat 257  Q
    |||||||||||| |||||||||||| ||| | |||||||||||||    
T  25689547 gtcccgtgagcatagctcagttggttggacaatgcattattatat 25689503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 331
Target Start/End: Complemental strand, 44070465 - 44070347
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaattc 312  Q
    ||||||||  ||||||||| |||||| | | |||||||||||| |||| |   || || |||||||||||||  | |||||||  || |||| |||||||    
T  44070465 ccgtgagcgtagctcagttagtaggacaatacattattatatgtaggggccgcggttcgaacctcggacaccctacttattcaccttataaggtgaattc 44070366  T
Q  313 tagccactagactatctaa 331  Q
    ||||||||| |||| ||||    
T  44070365 tagccactaaactacctaa 44070347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 580883 - 580771
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||| |   || || |||| |||||||| || |||||||  || |||||||||    
T  580883 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataagatgaa 580784  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  580783 ttctagccactag 580771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 212 - 326
Target Start/End: Original strand, 31564089 - 31564200
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtcggatcaaacctcggacaccacatttattcattttgtaagatgaatt 311  Q
    ||||||||||||| | |||||||||||||| | ||||||||||||||||||   || || |||| |||| ||| || |||||||  || |||||||||||    
T  31564089 agtcccgtgagcataactcagttggtaggacaatgcattattatatgcagg---ggttcgaaccccggaaaccccacttattcaccttataagatgaatt 31564185  T
Q  312 ctagccactagacta 326  Q
    |||||||||||||||    
T  31564186 ctagccactagacta 31564200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 325
Target Start/End: Original strand, 17239888 - 17240011
Alignment:
Q  205 tatgatgagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgt 301  Q
    |||||| |||||| |||||| |||||||||||||| | | ||||||||||||||||||| ||||   || ||||||||||||| || |||||||| || |    
T  17239888 tatgataagtcccatgagcatagctcagttggtagaacaatgcattattatatgcaggggtcgggattcgaacctcggacaccccacttattcatcttat 17239987  T
Q  302 aagatgaattctagccactagact 325  Q
    ||| ||||||||| |||| |||||    
T  17239988 aaggtgaattctaaccaccagact 17240011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 32891289 - 32891388
Alignment:
Q  226 agctcagttggtaggatagtgcattattatatgcaggg-tcggat--caaacctcggacaccacatttattcattttgtaagatgaattctagccactag 322  Q
    |||||||||||||||| | ||||||||||||||||||| |||| |  | |||| |||||||| || |||||||| || ||||||||||||||||||||||    
T  32891289 agctcagttggtaggacaatgcattattatatgcaggggtcggttttcgaaccccggacaccccacttattcatcttataagatgaattctagccactag 32891388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 36665428 - 36665536
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaattc 312  Q
    ||||||| | ||||||||| |||||| | ||||||||||||||||||| |   || || ||||||||||||| || ||||||||||| |||| |||||||    
T  36665428 ccgtgagtatagctcagtttgtaggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcattttataaggtgaattc 36665527  T
Q  313 tagccacta 321  Q
    || ||||||    
T  36665528 tatccacta 36665536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 2114535 - 2114419
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||| | | |||||||||||||| |||| ||||   || |||| |||||||| ||||||||||  || |||| ||||    
T  2114535 gtcccgtgagcatagctcagttggtagaacaatgcattattatatgtaggggtcggggttcgaaccccggacacctcatttattcaccttataaggtgaa 2114436  T
Q  310 ttctagccactagacta 326  Q
    ||||||||||| |||||    
T  2114435 ttctagccactggacta 2114419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 322
Target Start/End: Complemental strand, 20122574 - 20122463
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaat 310  Q
    ||||||||||| |||||||||||||||| | |||||||||||||| |||| |   || || |||| |||||||  || |||||||| || |||| |||||    
T  20122574 tcccgtgagcatagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacacgccacttattcatcttataaggtgaat 20122475  T
Q  311 tctagccactag 322  Q
    ||||||||||||    
T  20122474 tctagccactag 20122463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 322
Target Start/End: Complemental strand, 17115643 - 17115532
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgc-agggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaat 310  Q
    ||||||||||| |||||||||||||||| | || |||||||||||| | |||||||  || |||| |||||| | |||||||||| ||| |||| |||||    
T  17115643 tcccgtgagcatagctcagttggtaggacactgtattattatatgcaaaggtcggagttcgaaccccggacatcccatttattcactttataaggtgaat 17115544  T
Q  311 tctagccactag 322  Q
    |||||| |||||    
T  17115543 tctagcaactag 17115532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 25050342 - 25050290
Alignment:
Q  211 gagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  25050342 gagtccagtgagcatagctcagttggtaggataatgcattattatatgcaggg 25050290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 213 - 320
Target Start/End: Complemental strand, 30474295 - 30474185
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||| |   || || |||| | |||||| || |||||||  || |||| ||||    
T  30474295 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataaggtgaa 30474196  T
Q  310 ttctagccact 320  Q
    |||||||||||    
T  30474195 ttctagccact 30474185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 44721791 - 44721692
Alignment:
Q  226 agctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattctagccactag 322  Q
    |||||||||||||| | | ||||||||||||||||||| ||||   || ||||||||||||| ||||||||||  || |||| |||||||||||||||||    
T  44721791 agctcagttggtagaacaatgcattattatatgcaggggtcggggttcgaacctcggacaccccatttattcaccttataaggtgaattctagccactag 44721692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 331
Target Start/End: Original strand, 18255678 - 18255737
Alignment:
Q  272 aacctcggacaccacatttattcattttgtaagatgaattctagccactagactatctaa 331  Q
    ||||||||||||| || |||||||  || |||||||||||||||||||||||||||||||    
T  18255678 aacctcggacaccccacttattcacattataagatgaattctagccactagactatctaa 18255737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 326
Target Start/End: Complemental strand, 22297553 - 22297436
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    |||| |||||||| |||||||||||||||| | ||||||||||||||||||| |   || || |||| |||||||| ||||||||||  || |||  | |    
T  22297553 agtctcgtgagcatagctcagttggtaggacaatgcattattatatgcaggggcaggggttcgaaccccggacaccccatttattcaccttataatgtta 22297454  T
Q  309 attctagccactagacta 326  Q
    ||||||||||||| ||||    
T  22297453 attctagccactaaacta 22297436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 8234892 - 8234780
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | | |||||||||||| |||| |   || || |||| |||||||| || |||||||  || |||| ||||    
T  8234892 gtcccgtgagcatagctcagttggtaggacaatacattattatatgtaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaa 8234793  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  8234792 ttctagccactag 8234780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 3179319 - 3179431
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcg--gatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| | |||||||||||| | | ||||||||||||||||||| |||  | || |||||| |||||| || |||||||  || |||| ||||    
T  3179319 gtcccgtgagcataactcagttggtagaacaatgcattattatatgcaggggtcgaggttcgaacctcagacaccccacttattcaccttataaggtgaa 3179418  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  3179419 ttctagccactag 3179431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 7086248 - 7086364
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc--gga-tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||  | ||||||||||||||||||| |  ||| || |||| || ||||| || |||||||  || |||| ||||    
T  7086248 gtcccgtgagcatagctcagttggtagggcaatgcattattatatgcaggggccgggattcgaaccccgaacaccccaattattcaccttataaggtgaa 7086347  T
Q  310 ttctagccactagacta 326  Q
    ||||| |||||||||||    
T  7086348 ttctaaccactagacta 7086364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 10207643 - 10207688
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||    
T  10207643 ccgtgagcatagctcagttggtaggataatgcattattatatgcag 10207688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 15690135 - 15690084
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| |||||||||||||||| | |||||| ||||||||||||    
T  15690135 agtcccgtgagcatagctcagttggtaggacaatgcattgttatatgcaggg 15690084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 10262734 - 10262784
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| | |||||||||||||| | |||||||||||||||||||    
T  10262734 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggg 10262784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 15392312 - 15392199
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagg-gtc--ggatcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    ||||||||||||| | |||||||||||||| | |||||||||||||| ||| | |  || || ||||||||||||| || ||||||| ||| |||| ||     
T  15392312 agtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggagacgaggttcgaacctcggacacctcacttattcactttataaggtgt 15392213  T
Q  309 attctagccactag 322  Q
    ||| ||||||||||    
T  15392212 attttagccactag 15392199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 17154644 - 17154756
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| | ||| |||||||||| | ||||||||||||||||||| |   || || |||| |||||||| || |||||||  || |||| |||     
T  17154644 gtcccgtgagcataactcggttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgag 17154743  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  17154744 ttctagccactag 17154756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 41699101 - 41699147
Alignment:
Q  217 cgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||| | |||||||||||||||| |||||||||||||||||||    
T  41699101 cgtgagcataactcagttggtaggatattgcattattatatgcaggg 41699147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 322
Target Start/End: Original strand, 11133072 - 11133183
Alignment:
Q  215 cccgtgagcacagctcagttggtagg-atagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaat 310  Q
    |||||||||| ||||||||||||||| | | |||||| |||||||||||| ||||   || |||| |||||||| || |||||||  || |||| |||||    
T  11133072 cccgtgagcatagctcagttggtagggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaat 11133171  T
Q  311 tctagccactag 322  Q
    ||||||||||||    
T  11133172 tctagccactag 11133183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 326
Target Start/End: Original strand, 29664599 - 29664714
Alignment:
Q  215 cccgtgagcacagctcagttggtagg-atagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaat 310  Q
    |||||||||| |||||| |||| ||| | | |||||| |||||||||||| ||||   ||||| | |||||||| || |||||||| || |||| |||||    
T  29664599 cccgtgagcatagctcaattggcagggacaatgcattgttatatgcaggggtcggggttcaaatcccggacaccccacttattcatcttataaggtgaat 29664698  T
Q  311 tctagccactagacta 326  Q
    ||||||||||||||||    
T  29664699 tctagccactagacta 29664714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 36481067 - 36481111
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||    
T  36481067 ccgtgagcatagctcagttggtaggacaatgcattattatatgca 36481111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 22538533 - 22538584
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||  | |||||||||||||| | |||||||||||||||||||    
T  22538533 agtcccgtgagcctaactcagttggtaggacaatgcattattatatgcaggg 22538584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 26807181 - 26807134
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||| | |||||||||||||| | |||||||||||||||||||    
T  26807181 ccgtgagcataactcagttggtaggacaatgcattattatatgcaggg 26807134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 16973903 - 16973953
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| ||||||||| |||||| | || ||||||||||||||||    
T  16973903 gtcccgtgagcatagctcagtttgtaggacaatggattattatatgcaggg 16973953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 36520880 - 36520830
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||  |||||||||||||||| | |||||||||||||| ||||    
T  36520880 gtcccgtgagcgtagctcagttggtaggacaatgcattattatatgtaggg 36520830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 44422105 - 44422214
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattc 312  Q
    |||||||||  ||| | ||||||||| | ||||||||||||||||||| |||||  || |||| |||||||| || ||||||| ||| |||| | |||||    
T  44422105 ccgtgagcatggcttatttggtaggacaatgcattattatatgcagggatcggagttcgaaccccggacaccccacttattcactttataaggtaaattc 44422204  T
Q  313 tagccactag 322  Q
    || |||||||    
T  44422205 taaccactag 44422214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 1836583 - 1836628
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatg 258  Q
    |||||||||||  |||||||||||||||| | ||||||||||||||    
T  1836583 gtcccgtgagcctagctcagttggtaggacaatgcattattatatg 1836628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 18364474 - 18364425
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||| |||| ||||||||| | | |||||||||||||||||||    
T  18364474 tcccgtgagcatagctgagttggtagaacaatgcattattatatgcaggg 18364425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 27495530 - 27495583
Alignment:
Q  210 tgagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||| |||| |  ||||||||||||| | |||||||||||||||||||    
T  27495530 tgagtcccgtaagcataattcagttggtaggacaatgcattattatatgcaggg 27495583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 32988346 - 32988395
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||| ||||||||||||| || | |||||||||||| ||||||    
T  32988346 tcccgtgagcatagctcagttggtaagacaatgcattattatacgcaggg 32988395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 37245370 - 37245423
Alignment:
Q  210 tgagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||| ||| || |||||| ||||||||| |||||||||||||||| ||||    
T  37245370 tgagtcccatgatcatagctcaattggtaggacagtgcattattatatgtaggg 37245423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 20128564 - 20128608
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattata 256  Q
    ||||||||||||| | ||||||||||| || ||||||||||||||    
T  20128564 agtcccgtgagcataactcagttggtaagacagtgcattattata 20128608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 34620512 - 34620560
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    |||| |||||||| ||||| |||||||||| | ||||||||||||||||    
T  34620512 agtctcgtgagcatagctcggttggtaggacaatgcattattatatgca 34620560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 329
Target Start/End: Original strand, 42831942 - 42832061
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||| |   || ||||||| |||||||| || |||||||  || |||| ||||    
T  42831942 gtcccgtgagcatagctcagttggtaggacattgcattattatatgcaggggctggggttcaaaccccggacaccccacttattcaccttataaggtgaa 42832041  T
Q  310 ttctagccactagactatct 329  Q
    |||||| |||||| ||||||    
T  42832042 ttctagtcactaggctatct 42832061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 213 - 329
Target Start/End: Complemental strand, 29331264 - 29331145
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc--gga-tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||| ||||||||||| | |||||||||||||||||||||  ||| || |||||||||||||  ||||||| |  || |||| ||||    
T  29331264 gtcccgtgagcatagcttagttggtaggacaatgcattattatatgcagggtccgggattcgaacctcggacaccctatttatttacattataaggtgaa 29331165  T
Q  310 ttctagccactagactatct 329  Q
    |||||||||||| |||||||    
T  29331164 ttctagccactaaactatct 29331145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 15368813 - 15368912
Alignment:
Q  226 agctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaattctagccactag 322  Q
    |||||||||||||||| | ||||||||||||||||||| |   || || |||| |||||||| || ||||||||||| |||| |||||||||||||||||    
T  15368813 agctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcattttataaggtgaattctagccactag 15368912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 213 - 329
Target Start/End: Complemental strand, 18923985 - 18923866
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggt---cggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||||    || || ||||||||||||| ||  ||||||  || |||| ||||    
T  18923985 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcagggttcagggttcgaacctcggacaccccacgtattcaccttataaggtgaa 18923886  T
Q  310 ttctagccactagactatct 329  Q
    ||||||||| || |||||||    
T  18923885 ttctagccattaaactatct 18923866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 34560437 - 34560322
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtc-ggatcaaacctcggacaccacatttattcattttgtaagatgaat 310  Q
    ||||||||||   |||||||||||||||||| |||||||||||||| | ||||| || || ||||||||||||| || |||||||  || |||| |||||    
T  34560437 gtcccgtgagtttagctcagttggtaggataatgcattattatatgtatgggtcaggttcgaacctcggacaccccacttattcaccttataaggtgaat 34560338  T
Q  311 tctagccactagacta 326  Q
    ||||| ||||||||||    
T  34560337 tctagtcactagacta 34560322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 326
Target Start/End: Original strand, 21884566 - 21884686
Alignment:
Q  209 atgagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaaga 305  Q
    |||||||||||||||| |||||| ||||||||| | ||||||||||||||||||| |   || || |||| | |||||| || |||||||  || ||||     
T  21884566 atgagtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataagg 21884665  T
Q  306 tgaattctagccactagacta 326  Q
    ||||||||| |||||||||||    
T  21884666 tgaattctaaccactagacta 21884686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 322
Target Start/End: Original strand, 48110525 - 48110636
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaat 310  Q
    ||||||||||  |||||||||||||| | | ||||||||||||||||||| | |||  || ||||||||||||| || |||||||| || |||| ||||     
T  48110525 tcccgtgagcgtagctcagttggtagaacaatgcattattatatgcaggggttggagttcgaacctcggacacctcacttattcatcttataaggtgaaa 48110624  T
Q  311 tctagccactag 322  Q
    ||||||||||||    
T  48110625 tctagccactag 48110636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 8261772 - 8261725
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  8261772 ccgtgagcatagctcagttggtaggataatgcattattatatgcaggg 8261725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 320
Target Start/End: Original strand, 24661976 - 24662087
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tc-ggat-caaacctcggacaccacatttattcattttgtaagatga 308  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||||||| || |||| | |||| | |||||| ||||||||||  || |||| |||    
T  24661976 agtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggtcaggattcgaaccccagacaccccatttattcaacttataaggtga 24662075  T
Q  309 attctagccact 320  Q
    ||||||||||||    
T  24662076 attctagccact 24662087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 38020049 - 38019998
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  38020049 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggg 38019998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 37490885 - 37490997
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| | |||||||||||||| | ||||||||||||||||||| |   ||  | |||| |||||||| |  |||||||| || |||| ||||    
T  37490885 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggccggggtacgaaccacggacaccccgcttattcatcttataaggtgaa 37490984  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  37490985 ttctagccactag 37490997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 39433353 - 39433465
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtcgga---tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    ||||| |||||| || |||||||||| || | ||||||||||||||||||| | ||   || ||||||||||||| || |||||||  || |||| ||||    
T  39433353 gtcccatgagcatagttcagttggtatgaaaatgcattattatatgcaggggccgatgttcgaacctcggacaccccacttattcaccttataaggtgaa 39433452  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  39433453 ttctagccactag 39433465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 27745152 - 27745268
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tc--ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||| ||||||||| | ||||||||||||||||||| ||  || || |||| |||||||| ||||||||||  || |||  |||     
T  27745152 gtcccgtgagcatagctcatttggtaggaaaatgcattattatatgcagggatcggggttcgaaccccggacaccccatttattcaccttataaagtgag 27745251  T
Q  310 ttctagccactagacta 326  Q
    |||||||||||| ||||    
T  27745252 ttctagccactaaacta 27745268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 326
Target Start/End: Complemental strand, 43555970 - 43555858
Alignment:
Q  217 cgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tc--ggatcaaacctcggacaccacatttattcattttgtaagatgaattct 313  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||| ||  || |||||||  ||||||| || ||||| |  || |||| || |||||    
T  43555970 cgtgagcatagctcagttggtaggacaatgcattattatatgcagggatcggggttcaaacccaggacaccccacttatttaccttataaggtggattct 43555871  T
Q  314 agccactagacta 326  Q
    |||||||||||||    
T  43555870 agccactagacta 43555858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 3533074 - 3532962
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtc-ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    ||||||||||||| ||||||||| |||||| | |||||||||||||| | ||||| || || |||| |||||||| || |||||||  || |||| ||||    
T  3533074 agtcccgtgagcatagctcagttagtaggacaatgcattattatatgtaggggtcgggttccaaccccggacaccccacttattcaccttataaggtgaa 3532975  T
Q  310 ttctagccactag 322  Q
    ||||||| |||||    
T  3532974 ttctagctactag 3532962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 15774412 - 15774301
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| | |||||||||||||| | |||||||||||||| |||| ||||   || |||| |||||||| || |||||||  || |||| ||||    
T  15774412 gtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaa 15774313  T
Q  310 ttctagccacta 321  Q
    ||||||||||||    
T  15774312 ttctagccacta 15774301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 4354205 - 4354096
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||| ||||||| |||||||||||||||| | ||||||||||||||||||| |   || || ||| ||||||||| || |||||||  || |||  ||||    
T  4354205 gtcctgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaacttcggacaccccacttattcaccttataaagtgaa 4354106  T
Q  310 ttctagccac 319  Q
    ||||||||||    
T  4354105 ttctagccac 4354096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 4429579 - 4429532
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||    
T  4429579 ccgtgagcatagctcagttggtaggacaatgcattattatatgcaggg 4429532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 20357454 - 20357505
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| | |||||||||||||| | |||||||||||||||||||    
T  20357454 agtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggg 20357505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 20562501 - 20562450
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| | |||||||||||||| | |||||||||||||||||||    
T  20562501 agtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggg 20562450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 5172702 - 5172652
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||||||| ||||| | |||||||||||||||||||    
T  5172702 gtcccgtgagcatagctcagttgataggacaatgcattattatatgcaggg 5172652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 9408714 - 9408664
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||||||||||||| | |||||||||| ||||||||    
T  9408714 gtcccgtgagcatagctcagttggtaggacaatgcattattaaatgcaggg 9408664  T

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Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 23930644 - 23930594
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| || ||||||||||||| | |||||||||||||||||||    
T  23930644 gtcccgtgagcatagttcagttggtaggacaatgcattattatatgcaggg 23930594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 46116274 - 46116162
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||| ||||||||||| | |||||||| |||||||||| |   || || |||| |||||||| || |||||||  || |||| ||||    
T  46116274 gtcccgtgagcatagcttagttggtaggacaatgcattatcatatgcaggggctggggttcgaaccccggacaccccaattattcaccttataaggtgaa 46116175  T
Q  310 ttctagccactag 322  Q
    ||||| |||||||    
T  46116174 ttctaaccactag 46116162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 49606801 - 49606676
Alignment:
Q  210 tgagtcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtcgga--tcaaacctcggacaccacatttattcattttgtaa-ga 305  Q
    |||||||||| |||| |||||||||| ||||| | |||||||||||||| | ||| ||||  || ||| ||||||||| || |||||||  || ||| |     
T  49606801 tgagtcccgtaagcatagctcagttgttaggacaatgcattattatatgtaggggccggagttcgaacttcggacaccccacttattcagcttataaggg 49606702  T
Q  306 tgaattctagccactagactatctaa 331  Q
    |||||| |||||||||||||||||||    
T  49606701 tgaattttagccactagactatctaa 49606676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 23464086 - 23463979
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    ||||| |||||| || ||||||||||||| | ||||||||||||||||||| |   || || |||| |||||||| || || |||| ||| |||| ||||    
T  23464086 gtcccatgagcatagttcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttgttcactttataaggtgaa 23463987  T
Q  310 ttctagcc 317  Q
    ||||||||    
T  23463986 ttctagcc 23463979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 33059593 - 33059544
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    ||||| |||| || |||||||||||||||||| |||||||||||||||||    
T  33059593 agtcctgtgaacatagctcagttggtaggataatgcattattatatgcag 33059544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 6225716 - 6225665
Alignment:
Q  211 gagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||||| ||||    
T  6225716 gagtcccgtgagcacagctcagttggta-gataatgcattgttatatgtaggg 6225665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 12073177 - 12073133
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatat 257  Q
    |||||||||||| | |||||||||||||||| |||||||||||||    
T  12073177 gtcccgtgagcataactcagttggtaggataatgcattattatat 12073133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 12553191 - 12553303
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc----ggatcaaacctcggacaccacatttattcattttg--taagatgaa 309  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||| |    || || |||| |||||||| || ||||||| ||||   ||| ||||    
T  12553191 ccgtgagcacagctcagttggtaggaacatgcattgttatatgcaggggccgggggttcgaaccccggacaccccacttattcactttgaaaaaggtgaa 12553290  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  12553291 ttctagccactag 12553303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 19793526 - 19793633
Alignment:
Q  218 gtgagcacagctcagttggtaggatagtgcattattatatgca-gggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattcta 314  Q
    ||||||| | |||||||||||||| | |||||||||||||||| ||| ||||  || |||| |||||||| || |||||||  || |||| |||||||||    
T  19793526 gtgagcataactcagttggtaggacaatgcattattatatgcaggggccggaattcgaaccccggacaccccacttattcaccttataaggtgaattcta 19793625  T
Q  315 gccactag 322  Q
     |||||||    
T  19793626 accactag 19793633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 29442065 - 29442022
Alignment:
Q  215 cccgtgagcacagctcagttggtaggatagtgcattattatatg 258  Q
    |||||||||| |||||||||||||||| | ||||||||||||||    
T  29442065 cccgtgagcatagctcagttggtaggacaatgcattattatatg 29442022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 329
Target Start/End: Complemental strand, 32711211 - 32711125
Alignment:
Q  245 tgcattattatatgcagggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattctagccactagactatct 329  Q
    ||||||||||||||||||| |||   || |||| | |||||| || |||||||  || |||| ||||||||||||||||||||||||    
T  32711211 tgcattattatatgcagggccggggttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactagactatct 32711125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 40814867 - 40814816
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| ||||||||| ||| || | |||||||||||||||||||    
T  40814867 agtcccgtgagcatagctcagttagtaagacaatgcattattatatgcaggg 40814816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 49010800 - 49010753
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    |||||||||||| |||||||||||||||| | || |||||||||||||    
T  49010800 gtcccgtgagcatagctcagttggtaggacaatgtattattatatgca 49010753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 49251500 - 49251445
Alignment:
Q  208 gatgagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||| |||| ||||||| | |||||||||||||| | |||||||||||||||||||    
T  49251500 gatgtgtcctgtgagcataactcagttggtaggacaatgcattattatatgcaggg 49251445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 538429 - 538379
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| || ||||||||||| | | |||||||||||||||||||    
T  538429 gtcccgtgagcatagttcagttggtagaacaatgcattattatatgcaggg 538379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 11067434 - 11067483
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagg 262  Q
    |||||||||||| | || ||||||||||| |||||||||| |||||||||    
T  11067434 gtcccgtgagcataacttagttggtaggacagtgcattataatatgcagg 11067483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 30649088 - 30649137
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagg 262  Q
    |||||||||||| |||||||||| ||||| |  |||||||||||||||||    
T  30649088 gtcccgtgagcaaagctcagttgataggacaacgcattattatatgcagg 30649137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 43837500 - 43837451
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||| |||||||||||||||| | |||||| || |||||||||    
T  43837500 tcccgtgagcatagctcagttggtaggaaaatgcattcttctatgcaggg 43837451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 4429503 - 4429463
Alignment:
Q  289 ttattcattttgtaagatgaattctagccactagactatct 329  Q
    |||||||| || |||| ||||||||||||||||||||||||    
T  4429503 ttattcatcttataaggtgaattctagccactagactatct 4429463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 9527489 - 9527537
Alignment:
Q  278 ggacaccacatttattcattttgtaagatgaattctagccactagacta 326  Q
    ||||||| || |||||||| || |||| |||||||||||||||||||||    
T  9527489 ggacaccccacttattcatcttataaggtgaattctagccactagacta 9527537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 12866118 - 12866166
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    |||| ||||||| |||||  ||||||||||| |||||||||||||||||    
T  12866118 gtcctgtgagcatagctcgattggtaggataatgcattattatatgcag 12866166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 20753225 - 20753113
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | |||||||||||||| |||| |   || || |||| ||||||||||| |||||||  || |||| ||||    
T  20753225 gtcccgtgagcatagctcagttggtaggaaaatgcattattatatgtaggggccggggttcgaaccccggacaccacacttattcaccttataaggtgaa 20753126  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  20753125 ttctagccactag 20753113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 33944463 - 33944351
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| | |||||||||||||||| ||||||||||||||||||| |   || || ||||||| | ||  || ||||||||||| |||| ||||    
T  33944463 gtcccgtgagcataactcagttggtaggataatgcattattatatgcaggggccggggttcgaacctcgaatactccacttattcattttataaggtgaa 33944364  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  33944363 ttctagccactag 33944351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 211 - 322
Target Start/End: Complemental strand, 5430467 - 5430352
Alignment:
Q  211 gagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccaca-tttattcattttgtaagat 306  Q
    |||||||||||||| |||||||||||||||| | || |||||||||||||||| |   || || |||| |||||||| || ||||||||  || ||||||    
T  5430467 gagtcccgtgagcatagctcagttggtaggacaatgtattattatatgcagggaccagggttcgaaccccggacaccccactttattcaccttataagat 5430368  T
Q  307 gaattctagccactag 322  Q
    ||||||||||||||||    
T  5430367 gaattctagccactag 5430352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 32885686 - 32885794
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattc 312  Q
    ||||||||| |||||||||||||||| | |||||||||||||||| ||||||||  || ||||||||||||| || |||||||  || |||| |||||||    
T  32885686 ccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcggagttcgaacctcggacaccccacttattcaccttataaggtgaattc 32885785  T
Q  313 tagccacta 321  Q
    || ||||||    
T  32885786 tatccacta 32885794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 326
Target Start/End: Original strand, 10098133 - 10098236
Alignment:
Q  226 agctcagttggtaggatagtgcattattatatgcagggtc--ggat-caaacctcggacaccacatttattcattttgtaagatgaattctagccactag 322  Q
    ||||||| |||||||| | ||||||||||||||||||| |  |||| | |||| |||||||| || |||||||| || ||||||||||||||||||||||    
T  10098133 agctcagctggtaggacaatgcattattatatgcaggggccgggattcgaaccccggacaccccacttattcatcttataagatgaattctagccactag 10098232  T
Q  323 acta 326  Q
    ||||    
T  10098233 acta 10098236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 211 - 326
Target Start/End: Original strand, 3465576 - 3465694
Alignment:
Q  211 gagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc-gga--tcaaacctcggacaccacatttattcattttgtaagatg 307  Q
    ||||||||| |||| | |||||||||||||| | ||||||||||||||||||| | |||  || |||| |||||||| || |||||||  || |||| ||    
T  3465576 gagtcccgtaagcataactcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcaccttataaggtg 3465675  T
Q  308 aattctagccactagacta 326  Q
    |||||||||||||||||||    
T  3465676 aattctagccactagacta 3465694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 212 - 326
Target Start/End: Complemental strand, 9285760 - 9285643
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    ||||||||||||| |||||| ||||||||| | |||||||||||||||||||||   || || |||| | |||||| || ||||| |  || |||| |||    
T  9285760 agtcccgtgagcatagctcaattggtaggacaatgcattattatatgcagggtctggggttcgaaccccagacaccccacttattaaccttataaggtga 9285661  T
Q  309 attctagccactagacta 326  Q
    ||||||||||||||||||    
T  9285660 attctagccactagacta 9285643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 319
Target Start/End: Original strand, 45350271 - 45350380
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag-ggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||||| |||||||  || |||| |||||||| || |||||||  || ||| |||||    
T  45350271 gtcccgtcagcatagctcagttggtaggacagtgcattattatatgcagaggtcggagttcgaaccccggacaccccacttattcaccttataaaatgaa 45350370  T
Q  310 ttctagccac 319  Q
    ||||| ||||    
T  45350371 ttctaaccac 45350380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 319
Target Start/End: Original strand, 45359750 - 45359859
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag-ggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||||| |||||||  || |||| |||||||| || |||||||  || ||| |||||    
T  45359750 gtcccgtcagcatagctcagttggtaggacagtgcattattatatgcagaggtcggagttcgaaccccggacaccccacttattcaccttataaaatgaa 45359849  T
Q  310 ttctagccac 319  Q
    ||||| ||||    
T  45359850 ttctaaccac 45359859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 47018046 - 47017938
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||| |   || || |||| |||||||| || |||||||  || |||| ||||    
T  47018046 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaa 47017947  T
Q  310 ttctagcca 318  Q
    |||||||||    
T  47017946 ttctagcca 47017938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 46735069 - 46734985
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tc--ggatcaaacctcggacaccacatttattc 294  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||| ||  || |||||||||||||||| || ||||||    
T  46735069 gtcccgtgagcatagctcagttggtaggacactgcattattatatgcagggatcggggttcaaacctcggacaccccacttattc 46734985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 50657868 - 50657925
Alignment:
Q  206 atgatgagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||| ||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  50657868 atgataagtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggg 50657925  T

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Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 212 - 319
Target Start/End: Complemental strand, 24234175 - 24234065
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    ||||||||||||| |||||||||||||||  | ||||||||||||||||||| |   || |  |||| |||||||| || |||||||| || |||| |||    
T  24234175 agtcccgtgagcatagctcagttggtaggtcaatgcattattatatgcaggggccggggtttgaaccccggacaccccacttattcatcttataaggtga 24234076  T
Q  309 attctagccac 319  Q
    |||||||||||    
T  24234075 attctagccac 24234065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 21476182 - 21476131
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  21476182 agtcccgtgagcatagctcagttgataggatattgcattattatatgcaggg 21476131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 212 - 325
Target Start/End: Complemental strand, 34773784 - 34773668
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    |||| |||||||| || ||||||| ||||| | ||||||||||||||||||| |   || || |||| |||||||| || ||||||| ||| |||| |||    
T  34773784 agtctcgtgagcatagttcagttgataggacaatgcattattatatgcaggggctgaggttcgaaccccggacaccccacttattcactttataaggtga 34773685  T
Q  309 attctagccactagact 325  Q
    |||||||||||| ||||    
T  34773684 attctagccactggact 34773668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 12856182 - 12856290
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattc 312  Q
    ||||||||| |||||||||||||||||| |||| ||||||||| | ||||||||  || |||| |||||||| || |||||||  || |||| |||||||    
T  12856182 ccgtgagcatagctcagttggtaggataatgcactattatatgaaggggtcggagttcgaaccccggacaccccacttattcaccttataaggtgaattc 12856281  T
Q  313 tagccacta 321  Q
    || ||||||    
T  12856282 taaccacta 12856290  T

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Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 329
Target Start/End: Original strand, 31601801 - 31601920
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtcgga---tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||| | |||||||||||||| | | || |||||||||||||||| | ||   || |||| |||||||| || |||||||  || |||||||||    
T  31601801 gtcccgtgagtatagctcagttggtagaacaatgtattattatatgcaggggccgagattcgaaccccggacaccccacttattcaccttataagatgaa 31601900  T
Q  310 ttctagccactagactatct 329  Q
    ||||||||| | ||||||||    
T  31601901 ttctagccatttgactatct 31601920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 50783534 - 50783485
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagg 262  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  50783534 gtcccgtgagcatagctcagttggtaggacattgcattattatatgcagg 50783485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 53291437 - 53291493
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtcgga 268  Q
    |||||||||||| | |||||||||||||||| |||||||||||||||| ||||||||    
T  53291437 gtcccgtgagcataactcagttggtaggataatgcattattatatgcatgggtcgga 53291493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 548988 - 548937
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| ||| |||||||||||| | |||||||||||||||||||    
T  548988 agtcccgtgagcatagcccagttggtaggacaatgcattattatatgcaggg 548937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 326
Target Start/End: Complemental strand, 52608661 - 52608552
Alignment:
Q  219 tgagcacagctcagttggtaggatagtgcattattatatgca-gggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattctag 315  Q
    |||||| |||||||||||||||| | |||||||||||||||| || |||||  || |||| |||||||| || |||||||| ||  |||| |||||||||    
T  52608661 tgagcatagctcagttggtaggacaatgcattattatatgcatggatcggagttcgaaccccggacacc-cacttattcatcttacaagacgaattctag 52608563  T
Q  316 ccactagacta 326  Q
    ||| |||||||    
T  52608562 ccattagacta 52608552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 323
Target Start/End: Complemental strand, 55656209 - 55656095
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtcgga--tcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    ||||||||||||| | |||||||||| ||| | | |||||||||||||| ||| ||||  ||||| | ||||||||  | |||||||  || ||||||||    
T  55656209 agtcccgtgagcataactcagttggttggacaatacattattatatgcaggggccggagttcaaatcccggacaccctacttattcaccttataagatga 55656110  T
Q  309 attctagccactaga 323  Q
    |||||||||||||||    
T  55656109 attctagccactaga 55656095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 56546550 - 56546499
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| |||||| ||||||||| | |||||||||||||||||||    
T  56546550 agtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggg 56546499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 9172471 - 9172421
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| | |||||||||||||| | |||||||||||||||||||    
T  9172471 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggg 9172421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 31578014 - 31578124
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtcgga-tcaaacctcggacaccacatttattcattttgtaagatgaatt 311  Q
    ||||||||| || |||| ||||||||||| | ||||||||||||||| || | ||| || || | |||||||| || |||||||  || |||| ||||||    
T  31578014 gtcccgtgaacatagctgagttggtaggacaatgcattattatatgcgggttgggattcgaaacccggacaccccacttattcacattataaggtgaatt 31578113  T
Q  312 ctagccactag 322  Q
    |||||||||||    
T  31578114 ctagccactag 31578124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 331
Target Start/End: Complemental strand, 35451189 - 35451100
Alignment:
Q  245 tgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattctagccactagactatctaa 331  Q
    ||||||||||||||||||| |||||  || |||  |||||||| || |||||||  || |||||||||||||||||||||||||| ||||    
T  35451189 tgcattattatatgcaggggtcggagttcgaactacggacacctcacttattcaccttataagatgaattctagccactagactacctaa 35451100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 35031382 - 35031427
Alignment:
Q  217 cgtgagcacagctcagttggtaggatagtgcattattatatgcagg 262  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||    
T  35031382 cgtgagcatagctcagttggtaggacaatgcattattatatgcagg 35031427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 43606201 - 43606089
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tc--ggatcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    |||||||||| || |||||||||| ||||| | ||||||||||||||||||| ||  || | ||| | | |||||| ||||||| ||| || ||||||||    
T  43606201 agtcccgtgaacatagctcagttgataggacaatgcattattatatgcagggatcggggtttaaatcccagacaccccatttatccatcttataagatga 43606102  T
Q  309 attctagccacta 321  Q
    |||||| ||||||    
T  43606101 attctaaccacta 43606089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 326
Target Start/End: Original strand, 51077875 - 51077979
Alignment:
Q  226 agctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaaga-tgaattctagccacta 321  Q
    |||||||||||||||| | ||||||||||||||||||| |||||  || || |||| ||||| || |||||||  || ||||  ||||||||||||||||    
T  51077875 agctcagttggtaggacaatgcattattatatgcaggggtcggagttcgaatctcgaacaccccacttattcaccttataagggtgaattctagccacta 51077974  T
Q  322 gacta 326  Q
    |||||    
T  51077975 gacta 51077979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 52560760 - 52560809
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||| |||||| ||||||||| | |||||||||||||||||||    
T  52560760 tcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggg 52560809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 55266534 - 55266485
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||| |||||||||||||| | | |||||||||||||||||||    
T  55266534 tcccgtgagcatagctcagttggtagaacaatgcattattatatgcaggg 55266485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 333
Target Start/End: Original strand, 56314759 - 56314879
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tc--ggatcaaacctcggacaccacatttattcattttgtaagatgaattc 312  Q
    |||||| || || ||| ||||||||| | ||||||||||||||||||| ||  || || |||| ||||||||||| |||||||  ||  ||| |||||||    
T  56314759 ccgtgatcatagttcaattggtaggacaatgcattattatatgcaggggtcagggttcgaaccacggacaccacacttattcacattaaaaggtgaattc 56314858  T
Q  313 tagccactagactatctaatt 333  Q
    |||||||||| ||| ||||||    
T  56314859 tagccactaggctacctaatt 56314879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 4722564 - 4722516
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    ||||||||| || |||||||||||||||| | |||||||||||||||||    
T  4722564 gtcccgtgaacatagctcagttggtaggacaatgcattattatatgcag 4722516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 26203883 - 26203843
Alignment:
Q  217 cgtgagcacagctcagttggtaggatagtgcattattatat 257  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  26203883 cgtgagcatagctcagttggtaggacagtgcattattatat 26203843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 20266856 - 20266907
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||  |||||| ||||||||| | |||||||||||||||||||    
T  20266856 agtcccgtgagcttagctcatttggtaggacaatgcattattatatgcaggg 20266907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 52743223 - 52743270
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    |||||||||||| ||||| |||||||||| | ||||||||||||||||    
T  52743223 gtcccgtgagcatagctcggttggtaggacaatgcattattatatgca 52743270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 9924851 - 9924901
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| || ||||||||||||| |  ||||||||||||||||||    
T  9924851 gtcccgtgagcatagttcagttggtaggacaacgcattattatatgcaggg 9924901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 260
Target Start/End: Complemental strand, 13211455 - 13211405
Alignment:
Q  210 tgagtcccgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    ||||||||||||| | || ||||||||||||| | ||||||||||||||||    
T  13211455 tgagtcccgtgagtatagttcagttggtaggacaatgcattattatatgca 13211405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 534864 - 534815
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||| |||||| ||||||||| | ||||| |||||||||||||    
T  534864 tcccgtgagcatagctcaattggtaggacaatgcatcattatatgcaggg 534815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 6053988 - 6054025
Alignment:
Q  226 agctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||||||| | |||||||||||||||||||    
T  6053988 agctcagttggtaggacaatgcattattatatgcaggg 6054025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 9692958 - 9693007
Alignment:
Q  215 cccgtgagcacagctcagttggtagg-atagtgcattattatatgcaggg 263  Q
    |||||||||| ||||||||||| ||| ||| |||||||||||||||||||    
T  9692958 cccgtgagcatagctcagttggcagggataatgcattattatatgcaggg 9693007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 27921892 - 27921941
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||| |||||||||||||||    |||||||||||||||||||    
T  27921892 tcccgtgagcatagctcagttggtagggacatgcattattatatgcaggg 27921941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 3544529 - 3544485
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    |||||| || |||||||||||||||| | ||||||||||||||||    
T  3544529 ccgtgaacatagctcagttggtaggacaatgcattattatatgca 3544485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 47416477 - 47416513
Alignment:
Q  227 gctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||||||| || ||||||||||||||||    
T  47416477 gctcagttggtaggataatggattattatatgcaggg 47416513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 33206752 - 33206864
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||| |   || || |||| |||||||| || |||||||  || |||| ||||    
T  33206752 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattcaccttataaggtgaa 33206851  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  33206852 ttctagccactag 33206864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 321
Target Start/End: Complemental strand, 36727549 - 36727452
Alignment:
Q  226 agctcagttggtaggatagtgcattattatatgcagggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattctagccacta 321  Q
    |||||||||||||||| | |||||||||||||||| ||||||   || ||||||||||||| || |||||||| || |||| ||||||||||||||||    
T  36727549 agctcagttggtaggacaatgcattattatatgcaaggtcggggttcgaacctcggacaccccacttattcatcttataaggtgaattctagccacta 36727452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 49639022 - 49639135
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||| |||| |   || || |||| || ||||| || |||||||  ||||||| |||    
T  49639022 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccgaacaccccacttattcaccttgtaaggtga 49639121  T
Q  309 attctagccactag 322  Q
    ||||||||||||||    
T  49639122 attctagccactag 49639135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 13616174 - 13616062
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    ||||||||| || | ||| |||||||||| | |||||||||||||| |||| |||||  || ||||||||||||| || |||||||| || |||| ||||    
T  13616174 gtcccgtgaacataactcggttggtaggacaatgcattattatatgtaggggtcggagttcgaacctcggacaccccacttattcatcttataaggtgaa 13616075  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  13616074 ttctagccactag 13616062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 43566896 - 43566784
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    ||||||||| || |||||||||||||||| | ||||||||||||||||||| ||||   || |||||| |||||| || |||||||  || |||| ||||    
T  43566896 gtcccgtgaacatagctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcagacaccccacttattcaccttataaggtgaa 43566797  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  43566796 ttctagccactag 43566784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 326
Target Start/End: Original strand, 49146080 - 49146195
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaat 310  Q
    ||||||||||  | |||||||||||||| | ||||||||||||||||||| ||||   || |||| |||||||| || ||||||| ||| |||| |||||    
T  49146080 tcccgtgagcttaactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttataaggtgaat 49146179  T
Q  311 tctagccactagacta 326  Q
    ||||||||||| ||||    
T  49146180 tctagccactaaacta 49146195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 54983809 - 54983689
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattatt----atatgca-gggtc--ggatcaaacctcggacaccacatttattcattttgtaaga 305  Q
    |||||||||||| |||||||||||||||||| |||||||||    ||||||| |||||  || || |||| |||||||| ||||||||||  || ||||     
T  54983809 gtcccgtgagcatagctcagttggtaggataatgcattattatatatatgcaggggtcggggttcgaaccccggacaccccatttattcaccttataagg 54983710  T
Q  306 tgaattctagccactagacta 326  Q
    |||||||||||||||| ||||    
T  54983709 tgaattctagccactaaacta 54983689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 31698550 - 31698647
Alignment:
Q  235 ggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaattctagccactagactatct 329  Q
    ||||||||| ||||||||||||||||||  |   || || ||||||| ||||| || |||||||| || |||| ||||||||||||||||||||||||    
T  31698550 ggtaggataatgcattattatatgcaggagccggggttcgaacctcgaacaccccacttattcatcttataaggtgaattctagccactagactatct 31698647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 42832156 - 42832050
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtcggatcaaacctcggacaccacatttattcattttgtaagatgaattc 312  Q
    ||||||||| || ||| |||||||||||||| ||||||||||||||| ||   || || |||| |||||||  ||||||||||  || |||| |||||||    
T  42832156 gtcccgtgatcatagcccagttggtaggataatgcattattatatgccgg---ggttcgaaccccggacactccatttattcaccttataaggtgaattc 42832060  T
Q  313 tagccactag 322  Q
    ||||||||||    
T  42832059 tagccactag 42832050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 331
Target Start/End: Original strand, 35483264 - 35483385
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtc--ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| ||||||||| |||||| | |||||||||||||||| |||||  || || || | |||||||| || |||||||  || |||| | ||    
T  35483264 gtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattcaccttataaggtaaa 35483363  T
Q  310 ttctagccactagactatctaa 331  Q
    ||||||||||||||||| ||||    
T  35483364 ttctagccactagactacctaa 35483385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 47062155 - 47062059
Alignment:
Q  224 acagctcagttggtaggatagtgcattattatatgcagggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattctagcca 318  Q
    |||||||||||||||||| | ||||||||||||||  ||||||||  || |||| |||||||| |||||||| | ||| |||| ||| |||||||||    
T  47062155 acagctcagttggtaggacaatgcattattatatgatgggtcggagttcgaaccccggacaccccatttattaactttataaggtgagttctagcca 47062059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 14417863 - 14417974
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc-gga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    ||||| |||||| |||||| ||||||||| | ||||||||||||||||||| | |||  || |||| |||||||| || |||||||  || |||| ||||    
T  14417863 gtcccatgagcatagctcaattggtaggacaatgcattattatatgcaggggctggagttcgaaccccggacaccccacttattcaccttataaggtgaa 14417962  T
Q  310 ttctagccacta 321  Q
    ||||||||||||    
T  14417963 ttctagccacta 14417974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 53467960 - 53468059
Alignment:
Q  229 tcagttggtaggatagtgcattattatatgcagggtc--ggatcaaacctcggacaccacatttattcattttgtaagatgaattctagccactagacta 326  Q
    ||||||||||||| | ||||||||||||||||||| |  || || ||||||||||||| || |||||||  || ||||  || |||||||||||||||||    
T  53467960 tcagttggtaggacaatgcattattatatgcaggggcggggttcgaacctcggacaccccacttattcaccttataaggagatttctagccactagacta 53468059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 2564915 - 2564966
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| | |||||||||||| | |||||||||||||||||||||    
T  2564915 agtcccgtgagcataactcagttggtagaacagtgcattattatatgcaggg 2564966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 16278052 - 16278001
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||| ||||||||||||||||   |||||||||||||||||||    
T  16278052 agtcccgtgagcatagctcagttggtaggaccatgcattattatatgcaggg 16278001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 218 - 321
Target Start/End: Complemental strand, 32876211 - 32876105
Alignment:
Q  218 gtgagcacagctcagttggtaggatagtgcattattatatgca-gggtcg--gatcaaacctcggacaccacatttattcattttgtaagatgaattcta 314  Q
    ||||||| | |||||||||||||| | |||||||||||||||| ||||||  | |||||||||||||| |  |||||||||  || |||| |||||||||    
T  32876211 gtgagcatatctcagttggtaggacaatgcattattatatgcaggggtcgaagttcaaacctcggacatcctatttattcacattataaggtgaattcta 32876112  T
Q  315 gccacta 321  Q
     ||||||    
T  32876111 accacta 32876105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 51399950 - 51399993
Alignment:
Q  218 gtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  51399950 gtgagcatagctcagttggtaggatattgcattattatatgcag 51399993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 17440065 - 17440015
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| ||||| |||||||||| | |||||||||||||||||||    
T  17440065 gtcccgtgagcatagctcggttggtaggacaatgcattattatatgcaggg 17440015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 24751360 - 24751310
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| ||||||||| |||||| | |||||||||||||||||||    
T  24751360 gtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggg 24751310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 42271113 - 42271063
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||||||||||||| | |||||| ||||||||||||    
T  42271113 gtcccgtgagcatagctcagttggtaggacaatgcattgttatatgcaggg 42271063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 8958358 - 8958407
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagg 262  Q
    |||| ||||||| |||||||||||||||||| ||||||| ||||||||||    
T  8958358 gtcctgtgagcatagctcagttggtaggataatgcattactatatgcagg 8958407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 13874933 - 13874818
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    ||||||||| || |||||||||||| ||| | ||||||||||||||||||| ||||   ||||| | | |||| | ||||||||||  || |||| ||||    
T  13874933 gtcccgtgaacatagctcagttggt-ggacaatgcattattatatgcaggggtcggggttcaaatcccagacatcccatttattcaccttataaggtgaa 13874835  T
Q  310 ttctagccactagacta 326  Q
    |||||||||||||||||    
T  13874834 ttctagccactagacta 13874818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 14271965 - 14271908
Alignment:
Q  272 aacctcggacaccacatttattcattttgtaagatgaattctagccactagactatct 329  Q
    |||| |||||||| ||||||||||| || |||| ||||||||||||| ||||||||||    
T  14271965 aaccccggacacctcatttattcatcttataaggtgaattctagccattagactatct 14271908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 34503214 - 34503259
Alignment:
Q  217 cgtgagcacagctcagttggtaggatagtgcattattatatgcagg 262  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||    
T  34503214 cgtgagcatagctcagttggtaggacaatgcattattatatgcagg 34503259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 322
Target Start/End: Original strand, 40786279 - 40786387
Alignment:
Q  217 cgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtc--ggatcaaacctcggacaccacatttattcattttgtaagatgaattct 313  Q
    |||||||| |||||||||||||||| | |||||||||||||||| |||||  || || |||||| ||| || || ||||||  ||| |||| ||||||||    
T  40786279 cgtgagcatagctcagttggtaggacaatgcattattatatgcatgggtcggggttcgaacctcagacgccccacttattctctttataaggtgaattct 40786378  T
Q  314 agccactag 322  Q
    | |||||||    
T  40786379 aaccactag 40786387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 331
Target Start/End: Original strand, 41121865 - 41121991
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag-ggtc--ggatcaaacctcggacaccaca-tttattcattttgtaag--- 304  Q
    |||| |||||||| | |||||||||||||| | ||||||||||||||||| ||||  || ||||||| |||||||| || ||||||||  || ||||       
T  41121865 agtctcgtgagcataactcagttggtaggacaatgcattattatatgcagaggtcggggttcaaaccccggacaccccactttattcaccttataaggta 41121964  T
Q  305 atgaattctagccactagactatctaa 331  Q
    || ||||||||||||||| ||||||||    
T  41121965 atcaattctagccactaggctatctaa 41121991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 48173284 - 48173392
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattc 312  Q
    ||||||||| ||||||||||||| || | |||||||||||||| | |||| |||  || |||| |||||||| || |||||||  || |||| |||||||    
T  48173284 ccgtgagcatagctcagttggtaagacaatgcattattatatgtatgggttggagttcgaaccccggacacctcacttattcaccttataaggtgaattc 48173383  T
Q  313 tagccacta 321  Q
    |||||||||    
T  48173384 tagccacta 48173392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 26366319 - 26366267
Alignment:
Q  210 tgagtcccgtgagcacagctcagtt-ggtaggatagtgcattattatatgcag 261  Q
    |||||||| |||||| ||||||||| ||||||||| |||||||||||||||||    
T  26366319 tgagtcccatgagcatagctcagtttggtaggataatgcattattatatgcag 26366267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 32508894 - 32508783
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||  | |||||||| ||||||| ||||||||||||||||||| ||||   || |||| || ||||| || |||||||  || |||| ||||    
T  32508894 gtcccgtgagcctaactcagttgataggataatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcaccttataaggtgaa 32508795  T
Q  310 ttctagccacta 321  Q
    ||||||||||||    
T  32508794 ttctagccacta 32508783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 319
Target Start/End: Original strand, 23820639 - 23820733
Alignment:
Q  228 ctcagttggtaggatagtgcattattatatgcagggtc-gga--tcaaacctcggacaccacatttattcattttgtaagatgaattctagccac 319  Q
    |||||||||||||| | ||||||||||||||||||| | |||  || |||| | |||||| || |||||||| || |||| ||||||||||||||    
T  23820639 ctcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccagacaccccacttattcatcttataaggtgaattctagccac 23820733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 260
Target Start/End: Original strand, 32665277 - 32665323
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    |||||| |||| ||||||||| |||||||| ||||||||||||||||    
T  32665277 tcccgttagcatagctcagttagtaggataatgcattattatatgca 32665323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 50724363 - 50724412
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||||||||| ||| | |||||||||||||||||||    
T  50724363 gtcccgtgagcatagctcagttggt-ggacaatgcattattatatgcaggg 50724412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 50788485 - 50788436
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||||||||| ||| | |||||||||||||||||||    
T  50788485 gtcccgtgagcatagctcagttggt-ggacaatgcattattatatgcaggg 50788436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 8475409 - 8475458
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    |||| |||||||| |||||||||||||||| | |||||||| ||||||||    
T  8475409 agtctcgtgagcatagctcagttggtaggacaatgcattatgatatgcag 8475458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 13540063 - 13540014
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||| | |||||||||||||||| | |||||||||||||| ||||    
T  13540063 tcccgtgagtatagctcagttggtaggacaatgcattattatatgtaggg 13540014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 19117458 - 19117503
Alignment:
Q  218 gtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||| |||||||||||||||| | | |||||||||||||||||    
T  19117458 gtgagcatagctcagttggtaggacaatacattattatatgcaggg 19117503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 19540336 - 19540385
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagg 262  Q
    ||||| |||||| |||||||||||||||| | | ||||||||||||||||    
T  19540336 gtcccatgagcatagctcagttggtaggacaatacattattatatgcagg 19540385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 20244142 - 20244179
Alignment:
Q  226 agctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||||||| | |||||||||||||||||||    
T  20244142 agctcagttggtaggacaatgcattattatatgcaggg 20244179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 21420290 - 21420241
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    |||||||||||   |||||||||||||||| | |||||||||||||||||    
T  21420290 agtcccgtgagtttagctcagttggtaggacaatgcattattatatgcag 21420241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 35849366 - 35849329
Alignment:
Q  226 agctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||||||| | |||||||||||||||||||    
T  35849366 agctcagttggtaggacaatgcattattatatgcaggg 35849329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 50720417 - 50720462
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatg 258  Q
    |||||||||||| || ||||||||||||| | ||||||||||||||    
T  50720417 gtcccgtgagcatagttcagttggtaggacaatgcattattatatg 50720462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 50792431 - 50792386
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatg 258  Q
    |||||||||||| || ||||||||||||| | ||||||||||||||    
T  50792431 gtcccgtgagcatagttcagttggtaggacaatgcattattatatg 50792386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 53870830 - 53870879
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||| ||||| ||||||| |||| |||||||| ||||||||||    
T  53870830 tcccgtgagcatagctcggttggtaagataatgcattatgatatgcaggg 53870879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 247 - 327
Target Start/End: Complemental strand, 39969109 - 39969026
Alignment:
Q  247 cattattatatgcagggtcgga---tcaaacctcggacaccacatttattcattttgtaagatgaattctagccactagactat 327  Q
    ||||||||||||||||| | ||   |||||||||||||||| || |||||||| || |||||||||||||||||||||||||||    
T  39969109 cattattatatgcaggggctgaaattcaaacctcggacacctcacttattcatcttataagatgaattctagccactagactat 39969026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 36316074 - 36315989
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattca 295  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||| |   || || ||||||||||||| || |||||||    
T  36316074 gtcccgtgagcatagctcagttggtaggataatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattca 36315989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 212 - 326
Target Start/End: Complemental strand, 45198199 - 45198082
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtcgga---tcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    ||||||||||||| | |||||||||||||||| ||||||||||||||||| |   ||   || |||| |||||||| ||||||||||  || |||| |||    
T  45198199 agtcccgtgagcataactcagttggtaggataatgcattattatatgcagtgattgagattcgaaccccggacaccccatttattcaccttataaggtga 45198100  T
Q  309 attctagccactagacta 326  Q
    |||||||||| |||||||    
T  45198099 attctagccattagacta 45198082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 326
Target Start/End: Original strand, 22741197 - 22741316
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag-ggtc----ggatcaaacctcggacaccacatttattcattttgtaagat 306  Q
    ||||||||||||| ||||| |||||||||| | |||||||||||||||||  |||    || || || |||||||||| || |||||||| || |||| |    
T  22741197 agtcccgtgagcatagctcggttggtaggacaatgcattattatatgcagtagtcagggggttcgaatctcggacaccccacttattcatcttataaggt 22741296  T
Q  307 gaattctagccactagacta 326  Q
    ||||||||||||||||||||    
T  22741297 gaattctagccactagacta 22741316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 326
Target Start/End: Complemental strand, 22966062 - 22965942
Alignment:
Q  209 atgagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaaga 305  Q
    |||||||||||||||| |||||| ||||||||| | ||||||||||||||||||| |   || || |||| | |||||| || |||||||  || ||||     
T  22966062 atgagtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataagg 22965963  T
Q  306 tgaattctagccactagacta 326  Q
    ||||||||| |||||||||||    
T  22965962 tgaattctaaccactagacta 22965942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 4590701 - 4590599
Alignment:
Q  218 gtgagcacagctcagttggtaggatagtgcattattatatgcagggtcggatcaaacctcggacaccacatttattcattttgtaagatgaa--ttctag 315  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||||    || || | ||||||||||| |||||||| || |||| ||||  ||||||    
T  4590701 gtgagcatagctcagttggtaggacaatgcattattatatgcagggt----tcgaatcccggacaccacacttattcatcttataaggtgaattttctag 4590606  T
Q  316 ccactag 322  Q
    |||||||    
T  4590605 ccactag 4590599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 22706128 - 22706016
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    ||||||||| || |||||||||||||||| | || |||||||||||||||| |   || ||||||  |||||||| || |||||||  || |||||||||    
T  22706128 gtcccgtgaacatagctcagttggtaggacaatgtattattatatgcaggggctgaggttcaaactccggacaccccacttattcaccttataagatgaa 22706029  T
Q  310 ttctagccactag 322  Q
    ||||||| |||||    
T  22706028 ttctagctactag 22706016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 25818281 - 25818331
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  25818281 gtcccgtgagcataactcagttggtaggataatgcattattatatgcaggg 25818331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 29778976 - 29779026
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  29778976 gtcccgtgagcatagctcaattggtaggataatgcattattatatgcaggg 29779026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 34948101 - 34948213
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | |||||||| |||||||| | |   || || |||| |||||||| || |||||||  || |||| ||||    
T  34948101 gtcccgtgagcatagctcagttggtaggacaatgcattatcatatgcagtggccgaggttcgaaccccggacaccccacttattcaccttataaggtgaa 34948200  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  34948201 ttctagccactag 34948213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 42887149 - 42887265
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| ||||||||||||| || | | ||||||||||||||||| |   || || |||| |||||||| || ||||| |  || |||| ||||    
T  42887149 gtcccgtgagcatagctcagttggtacgacaattcattattatatgcaggggctgaggttcgaaccccggacaccccacttatttaccttataaggtgaa 42887248  T
Q  310 ttctagccactagacta 326  Q
    |||||||||||||||||    
T  42887249 ttctagccactagacta 42887265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 27047809 - 27047730
Alignment:
Q  219 tgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattca 295  Q
    |||||| |||||||||||||||| | ||||||||||||||||||| |   || || ||||||||||||| ||||||||||    
T  27047809 tgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccatttattca 27047730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 8195910 - 8195960
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||||||||||||| | ||||||||||||| |||||    
T  8195910 gtcccgtgagcatagctcagttggtaggacaatgcattattatatccaggg 8195960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 30644164 - 30644214
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||| | |||||||||||||||| | |||||||||||||||||||    
T  30644164 gtcccgtgagtatagctcagttggtaggacaatgcattattatatgcaggg 30644214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 38778779 - 38778729
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| | |||||||||||||| | |||||||||||||||||||    
T  38778779 gtcccgtgagcatatctcagttggtaggacaatgcattattatatgcaggg 38778729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 44437925 - 44437875
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| ||||||||| |||||| | |||||||||||||||||||    
T  44437925 gtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggg 44437875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 49012393 - 49012443
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| |||||||||||||||| | |||||||||||||| ||||    
T  49012393 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgaaggg 49012443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 924379 - 924342
Alignment:
Q  226 agctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  924379 agctcagttggtaggatagtgcattattatatgtaggg 924342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 4042348 - 4042252
Alignment:
Q  233 ttggtaggatagtgcattattatatgcaggg-tcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattctagccactagacta 326  Q
    ||||| ||||| ||||||||||||||||||| |||||  || ||| |||||||||  | ||||||||||| |||| |||||||||| | ||||||||    
T  4042348 ttggtgggataatgcattattatatgcaggggtcggagttcgaacttcggacacccaacttattcattttataaggtgaattctagtcgctagacta 4042252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 7263098 - 7262990
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag-ggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||| | |||||||||||||||| | |||||||||||||| || ||| |||  || |||| || |||||  |||||||||| || |||| ||||    
T  7263098 gtcccgtgagtatagctcagttggtaggacaatgcattattatatgtagaggttggagttcgaaccccgaacaccctatttattcatcttataaggtgaa 7262999  T
Q  310 ttctagcca 318  Q
    |||||||||    
T  7262998 ttctagcca 7262990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 229 - 314
Target Start/End: Original strand, 8724391 - 8724479
Alignment:
Q  229 tcagttggtaggatagtgcattattatatgcag-ggtcgg--atcaaacctcggacaccacatttattcattttgtaagatgaattcta 314  Q
    ||||||||||||||| | ||||||||||||||| ||||||  ||| ||||||||||||| || |||||||  || |||| |||||||||    
T  8724391 tcagttggtaggataatacattattatatgcagaggtcgggaatcgaacctcggacaccccacttattcaccttataaggtgaattcta 8724479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 22047520 - 22047565
Alignment:
Q  218 gtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||    
T  22047520 gtgagcatagctcagttggtaggacaatgcattattatatgcaggg 22047565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 28694286 - 28694237
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagg 262  Q
    ||||| |||||| |||||||||| ||||| ||||||||||||||||||||    
T  28694286 gtcccatgagcatagctcagttgataggacagtgcattattatatgcagg 28694237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 27907994 - 27907884
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc--ggatca-aacctcggacaccacatttattcattttgtaagatga 308  Q
    ||||||||||||||   ||||||||||||| | ||||||||||||||||||| |  || | | || |||||||||| || |||||||| || |||| |||    
T  27907994 agtcccgtgagcac---tcagttggtaggacaatgcattattatatgcaggggccggggtaagaatctcggacaccccacttattcatcttataaggtga 27907898  T
Q  309 attctagccactag 322  Q
    ||| ||||||||||    
T  27907897 attttagccactag 27907884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 34962072 - 34962024
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    |||| ||||||| |||||||||||||||| | |||||||||||||||||    
T  34962072 gtcctgtgagcatagctcagttggtaggacaatgcattattatatgcag 34962024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 44843753 - 44843805
Alignment:
Q  277 cggacaccacatttattcattttgtaagatgaattctagccactagactatct 329  Q
    |||||||| ||||||||||| || |||| ||||||||| ||||||||||||||    
T  44843753 cggacaccccatttattcatcttataaggtgaattctaaccactagactatct 44843805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 2261581 - 2261534
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||| |||||| ||||||||| | |||||||||||||||||||    
T  2261581 ccgtgagcatagctcaattggtaggacaatgcattattatatgcaggg 2261534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 46337969 - 46337918
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||| || || ||||||||||||| | |||||||||||||||||||    
T  46337969 agtcccgtgaacatagttcagttggtaggacaatgcattattatatgcaggg 46337918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 47552212 - 47552255
Alignment:
Q  217 cgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    |||||||| |||||||||||||||| | ||||||||||||||||    
T  47552212 cgtgagcatagctcagttggtaggacaatgcattattatatgca 47552255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 4818015 - 4818061
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgc 259  Q
    ||||||||||||  ||||||||||||||| | |||||||||||||||    
T  4818015 gtcccgtgagcatcgctcagttggtaggacaatgcattattatatgc 4818061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 17900979 - 17900929
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||| |||||| |||| ||||||||||| | |||||||||||||||||||    
T  17900979 gtcccatgagcatagcttagttggtaggacaatgcattattatatgcaggg 17900929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 21086099 - 21086149
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||| ||| || |||||||||||||||| | |||||||||||||||||||    
T  21086099 gtcccatgaacatagctcagttggtaggacaatgcattattatatgcaggg 21086149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 23685654 - 23685604
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||| |||||| |||||||||| ||||| | |||||||||||||||||||    
T  23685654 gtcccatgagcatagctcagttgataggacaatgcattattatatgcaggg 23685604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 29710200 - 29710150
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||| | |||||||||||||||| | |||||||||||||| ||||    
T  29710200 gtcccgtgagtatagctcagttggtaggacaatgcattattatatgtaggg 29710150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 30741559 - 30741609
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| | |||||||||||||||| || ||| ||||||||||||    
T  30741559 gtcccgtgagcataactcagttggtaggataatgtattgttatatgcaggg 30741609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 260
Target Start/End: Complemental strand, 30748068 - 30748018
Alignment:
Q  210 tgagtcccgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    |||||||||| |||| |||||| |||||| |||| ||||||||||||||||    
T  30748068 tgagtcccgtaagcatagctcaattggtatgatactgcattattatatgca 30748018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 32387225 - 32387175
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| | |||||||||||||||| | |||||||||||| ||||    
T  32387225 gtcccgtgagcataactcagttggtaggataatacattattatatgtaggg 32387175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 46716334 - 46716376
Alignment:
Q  219 tgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    |||||| |||||||||||||||| | |||||||||||||||||    
T  46716334 tgagcatagctcagttggtaggacaatgcattattatatgcag 46716376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 5787457 - 5787506
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||| | |||||| ||||||||| | |||||||||||||||||||    
T  5787457 tcccgtgagtatagctcaattggtaggacaatgcattattatatgcaggg 5787506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 14818464 - 14818415
Alignment:
Q  215 cccgtgagcacagctcagttggtagg-atagtgcattattatatgcaggg 263  Q
    |||||||||| ||||||||||| ||| | |||||||||||||||||||||    
T  14818464 cccgtgagcatagctcagttggcagggacagtgcattattatatgcaggg 14818415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 15265462 - 15265413
Alignment:
Q  215 cccgtgagcacagctcagttggtagg-atagtgcattattatatgcaggg 263  Q
    |||||||||| ||||||||||| ||| | |||||||||||||||||||||    
T  15265462 cccgtgagcatagctcagttggcagggacagtgcattattatatgcaggg 15265413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 322
Target Start/End: Complemental strand, 21285452 - 21285341
Alignment:
Q  215 cccgtgagcacagctcagttggtagg-atagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaat 310  Q
    |||||||||| ||||||||||| ||| | | |||||| |||||||||||| |   || || |||| |||||||| || |||||||  || |||| |||||    
T  21285452 cccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaat 21285353  T
Q  311 tctagccactag 322  Q
    ||||||||||||    
T  21285352 tctagccactag 21285341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 21925470 - 21925514
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatat 257  Q
    |||||||||||| |||||| ||||||||| | |||||||||||||    
T  21925470 gtcccgtgagcatagctcaattggtaggacaatgcattattatat 21925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 24479584 - 24479628
Alignment:
Q  219 tgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||| |||||| ||||||||| |||||||||||||||| ||||    
T  24479584 tgagcatagctcaattggtaggacagtgcattattatatggaggg 24479628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 327
Target Start/End: Complemental strand, 25711231 - 25711113
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgt-aagatga 308  Q
    |||||||||| | | |||||||| ||||||| |||||||||||||| |||| |   || || ||||||||||||| || ||||||| ||| | ||  |||    
T  25711231 gtcccgtgagtataactcagttgataggataatgcattattatatgtaggggccggggttcgaacctcggacaccccacttattcactttataaatgtga 25711132  T
Q  309 attctagccactagactat 327  Q
    |||||| ||||||| ||||    
T  25711131 attctatccactaggctat 25711113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 37917389 - 37917437
Alignment:
Q  215 cccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||| ||||||||||||||||   ||||| |||||||||||||    
T  37917389 cccgtgagcatagctcagttggtaggaacatgcataattatatgcaggg 37917437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 43970953 - 43970905
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    |||||||||||| | |||||||||||| | | |||||||||||||||||    
T  43970953 gtcccgtgagcataactcagttggtagaacaatgcattattatatgcag 43970905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 5e-17; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 12089092 - 12089204
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc-gga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||| | |||  || |||| |||||||| || |||||||  || |||| ||||    
T  12089092 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcaccttataaggtgaa 12089191  T
Q  310 ttctagccactag 322  Q
    |||||||||||||    
T  12089192 ttctagccactag 12089204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 217 - 326
Target Start/End: Complemental strand, 12128005 - 12127893
Alignment:
Q  217 cgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaattct 313  Q
    |||||||| |||||||||||||||| | |||||||||||||||| ||||||||  || |||| |||||||  || |||||||  || |||| ||||||||    
T  12128005 cgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcggaattcgaaccccggacacgccacttattcaccttataaggtgaattct 12127906  T
Q  314 agccactagacta 326  Q
    |||||||||||||    
T  12127905 agccactagacta 12127893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 212 - 331
Target Start/End: Complemental strand, 7563677 - 7563555
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtc--ggatcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    ||||||||||||| |||||||||||||||| | |||||||||| ||||| |||||  || ||||||| |||||||| || |||||||  || |||| |||    
T  7563677 agtcccgtgagcatagctcagttggtaggacaatgcattattacatgcaggggtcagggttcaaaccccggacaccccacttattcaccttataaggtga 7563578  T
Q  309 attctagccactagactatctaa 331  Q
    ||| ||||||||| |||| ||||    
T  7563577 attttagccactaaactacctaa 7563555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 10377224 - 10377108
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||| | |||||||||||||||| | ||||||||||||||||| | |   || || |||| || ||||| || |||||||  || |||||||||    
T  10377224 gtcccgtgagtatagctcagttggtaggacaatgcattattatatgcagaggccggggttcgaaccccgaacaccccacttattcacgttataagatgaa 10377125  T
Q  310 ttctagccactagacta 326  Q
    |||||||||||||||||    
T  10377124 ttctagccactagacta 10377108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 22389850 - 22389734
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtc--ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||| |||||  || || || | |||||||| || |||||||  || |||| ||||    
T  22389850 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcagggttcgaatcccggacaccccacttattcaccttataaggtgaa 22389751  T
Q  310 ttctagccactagacta 326  Q
    |||||||| ||||||||    
T  22389750 ttctagccgctagacta 22389734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 35190759 - 35190879
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaat 310  Q
    |||| |||||| |||||||||||||| | | |||||||||||||||| ||||||||  || |||| || ||||| || |||||||  || |||| |||||    
T  35190759 tcccatgagcatagctcagttggtagaacaatgcattattatatgcaggggtcggagttcgaaccccgaacaccccacttattcaccttataaggtgaat 35190858  T
Q  311 tctagccactagactatctaa 331  Q
    |||||||||||||||| ||||    
T  35190859 tctagccactagactacctaa 35190879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 9491835 - 9491723
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| | |||||||||||||| | |||||||||||||| |||| |   || || |||| |||||||| || |||||||  || |||||||||    
T  9491835 gtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacaccccacttattcaccttataagatgaa 9491736  T
Q  310 ttctagccactag 322  Q
    ||||| |||||||    
T  9491735 ttctaaccactag 9491723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 22501013 - 22501130
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtc--gga-tcaaacctcggacaccacatttattcattttgtaagatga 308  Q
    ||||| |||||| |||||||||||||||| | |||||||||||||||| |||||  ||| || ||||  | ||||| || |||||||  ||||||| |||    
T  22501013 gtcccatgagcatagctcagttggtaggacaatgcattattatatgcaggggtccgggattcgaaccaagaacaccccacttattcaccttgtaaggtga 22501112  T
Q  309 attctagccactagacta 326  Q
    ||||||||||||||||||    
T  22501113 attctagccactagacta 22501130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 19642648 - 19642600
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  19642648 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgca 19642600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 6530269 - 6530188
Alignment:
Q  248 attattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaattctagccactagacta 326  Q
    |||||||||||||||| |   || |||||||||||||||| || |||||||  || |||| |||||||||||||||||||||    
T  6530269 attattatatgcaggggccggggttcaaacctcggacaccccacttattcaccttataaggtgaattctagccactagacta 6530188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 6025486 - 6025436
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||| |||| | |||||||||||||||| |||||||||||||||||||    
T  6025486 gtcccgtaagcataactcagttggtaggataatgcattattatatgcaggg 6025436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 11982757 - 11982807
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||| ||||| |||||||||||||| ||| |||||||||||||||||||    
T  11982757 gtcccgggagcatagctcagttggtagaataatgcattattatatgcaggg 11982807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 16269813 - 16269767
Alignment:
Q  217 cgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||| ||||| |||||||||| |||||||||||||||||||||    
T  16269813 cgtgagcatagctcggttggtaggacagtgcattattatatgcaggg 16269767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 30566053 - 30566169
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag-ggtcg--gatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| | |||||||||||||| | ||||||||||||||||| ||| |  | |  |||| |||||||| || |||||||  || |||| ||||    
T  30566053 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcaccttataaggtgaa 30566152  T
Q  310 ttctagccactagacta 326  Q
    ||| |||||||||||||    
T  30566153 ttccagccactagacta 30566169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 32057028 - 32057077
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    ||||||||||||| |||||||||| ||||| | |||||||||||||||||    
T  32057028 agtcccgtgagcatagctcagttgataggacaatgcattattatatgcag 32057077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 34365730 - 34365841
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggtc---ggatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| || ||||||||||||| | ||||||||||| ||||||| |   || || ||||||| ||||  || |||||||| || |||  ||||    
T  34365730 gtcccgtgagcatagttcagttggtaggacaatgcattattatgtgcaggggccggggttcgaacctcgaacactccacttattcatcttataaagtgaa 34365829  T
Q  310 ttctagccacta 321  Q
    ||||||||||||    
T  34365830 ttctagccacta 34365841  T

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Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 329
Target Start/End: Complemental strand, 21507301 - 21507183
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgca-gggtcgga--tcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| |||| ||||||||||| | || ||||||||||||| ||||||||  |  |||  |||||||| || ||||||| ||| |||| ||||    
T  21507301 gtcccgtgagcatagcttagttggtaggacaatgtattattatatgcaggggtcggagtttgaactccggacaccccacttattcactttataag-tgaa 21507203  T
Q  310 ttctagccactagactatct 329  Q
    |||||||||||  |||||||    
T  21507202 ttctagccactgaactatct 21507183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 25020622 - 25020516
Alignment:
Q  219 tgagcacagctcagttggtaggatagtgcattattatatgcaggg---tcggatcaaacctcggacaccacatttattcattttgtaagatgaattctag 315  Q
    |||||| ||||||| ||||||||   |||||||||||||||||||   | || || |||| |||||||| || |||||||  || |||| ||||||||||    
T  25020622 tgagcatagctcagctggtaggacgatgcattattatatgcaggggcctgggttcgaaccccggacaccccacttattcaccttataaggtgaattctag 25020523  T
Q  316 ccactag 322  Q
    |||||||    
T  25020522 ccactag 25020516  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 5288442 - 5288395
Alignment:
Q  216 ccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||| | |||||||||||||| | |||||||||||||||||||    
T  5288442 ccgtgagcataactcagttggtaggacaatgcattattatatgcaggg 5288395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 19417817 - 19417867
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||| |||| ||||| |||||||||||| || ||||||||||||||||    
T  19417817 gtcccgtaagcatagctctgttggtaggataatgtattattatatgcaggg 19417867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 34396078 - 34396128
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| || |||||||||| || | |||||||||||||||||||    
T  34396078 gtcccgtgagcatagttcagttggtacgacaatgcattattatatgcaggg 34396128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 8233080 - 8233125
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatat 257  Q
    ||||||||||||| |||||||||||||||| | | |||||||||||    
T  8233080 agtcccgtgagcatagctcagttggtaggacaatacattattatat 8233125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 16801784 - 16801833
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagg 262  Q
    |||||||||||| |||||||||||||||| |   ||||||||||||||||    
T  16801784 gtcccgtgagcatagctcagttggtaggacaaaacattattatatgcagg 16801833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 34792942 - 34792894
Alignment:
Q  214 tcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||||||||| |||||||||||| ||| | |||||||||||||||||||    
T  34792942 tcccgtgagcatagctcagttggt-ggacaatgcattattatatgcaggg 34792894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 18244112 - 18244064
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag 261  Q
    ||||| ||| || |||||||||||||||| | |||||||||||||||||    
T  18244112 gtcccatgaacatagctcagttggtaggacaatgcattattatatgcag 18244064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 24623516 - 24623564
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgca 260  Q
    |||||| ||| || |||||||||||||||| | ||||||||||||||||    
T  24623516 agtcccatgaacatagctcagttggtaggacaatgcattattatatgca 24623564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 31741557 - 31741513
Alignment:
Q  219 tgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||| |||||||||||||||| | |||||||||||||| ||||    
T  31741557 tgagcatagctcagttggtaggacaatgcattattatatgtaggg 31741513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 101826 - 101876
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  101826 gtcccgtgagcatagctcagctggtaggataatgcattattatatgcaggg 101876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 2483 - 2599
Alignment:
Q  213 gtcccgtgagcacagctcagttggtaggatagtgcattattatatgcag-ggtcg--gatcaaacctcggacaccacatttattcattttgtaagatgaa 309  Q
    |||||||||||| | |||||||||||||| | ||||||||||||||||| ||| |  | |  |||| |||||||| || |||||||  || |||| ||||    
T  2483 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcaccttataaggtgaa 2582  T
Q  310 ttctagccactagacta 326  Q
    ||| |||||||||||||    
T  2583 ttccagccactagacta 2599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 43791 - 43747
Alignment:
Q  218 gtgagcacagctcagttggtaggatagtgcattattatatgcagg 262  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||    
T  43791 gtgagcatagctcagttggtaggacaatgcattattatatgcagg 43747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 16849 - 16892
Alignment:
Q  220 gagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    ||||| |||||||||||||||| | |||||||||||||||||||    
T  16849 gagcatagctcagttggtaggacaatgcattattatatgcaggg 16892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 159008 - 159059
Alignment:
Q  212 agtcccgtgagcacagctcagttggtaggatagtgcattattatatgcaggg 263  Q
    |||||| |||||| | |||||||||||||| | |||||||||||||||||||    
T  159008 agtcccatgagcataactcagttggtaggacaatgcattattatatgcaggg 159059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 111799 - 111746
Alignment:
Q  211 gagtcccgtgagcacagctcagttggtaggatagtgcattattatatgcagggt 264  Q
    |||||| |||||||||||||| ||||||| | | | ||||||||||||||||||    
T  111799 gagtcctgtgagcacagctcacttggtagaacaatacattattatatgcagggt 111746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 451408 - 451364
Alignment:
Q  277 cggacaccacatttattcattttgtaagatgaattctagccacta 321  Q
    |||||||| || |||||||| || |||||||||||||||||||||    
T  451408 cggacaccccacttattcatcttataagatgaattctagccacta 451364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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