View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14349_low_31 (Length: 457)

Name: NF14349_low_31
Description: NF14349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14349_low_31
NF14349_low_31
[»] chr2 (22 HSPs)
chr2 (11-337)||(28438566-28438892)
chr2 (337-438)||(5032007-5032108)
chr2 (338-438)||(34134658-34134758)
chr2 (335-438)||(23352792-23352894)
chr2 (338-435)||(25086408-25086504)
chr2 (334-404)||(44050132-44050202)
chr2 (343-408)||(44254715-44254779)
chr2 (343-407)||(9634329-9634392)
chr2 (344-438)||(2842771-2842868)
chr2 (335-422)||(3012737-3012823)
chr2 (341-404)||(14890979-14891042)
chr2 (343-438)||(22525889-22525983)
chr2 (337-406)||(1907650-1907719)
chr2 (338-404)||(14255420-14255486)
chr2 (336-414)||(35334628-35334706)
chr2 (342-404)||(44977391-44977453)
chr2 (42-103)||(13518652-13518713)
chr2 (337-438)||(34119539-34119639)
chr2 (390-438)||(5054692-5054740)
chr2 (390-438)||(6895978-6896026)
chr2 (335-407)||(13765515-13765586)
chr2 (390-438)||(15269945-15269993)
[»] chr6 (15 HSPs)
chr6 (335-437)||(34570479-34570581)
chr6 (21-161)||(11005066-11005205)
chr6 (24-141)||(24322427-24322544)
chr6 (335-435)||(6531065-6531164)
chr6 (338-438)||(13143270-13143369)
chr6 (337-404)||(33656888-33656955)
chr6 (336-438)||(32459402-32459503)
chr6 (338-403)||(3832582-3832646)
chr6 (337-404)||(25127717-25127784)
chr6 (343-405)||(31749482-31749543)
chr6 (336-438)||(31883189-31883290)
chr6 (336-438)||(35213447-35213548)
chr6 (17-146)||(26271054-26271183)
chr6 (344-408)||(30621853-30621917)
chr6 (343-407)||(32046813-32046876)
[»] chr5 (15 HSPs)
chr5 (336-438)||(18695402-18695504)
chr5 (338-438)||(6940037-6940137)
chr5 (336-438)||(9939317-9939419)
chr5 (17-140)||(19963974-19964097)
chr5 (17-137)||(27248057-27248177)
chr5 (336-438)||(41175592-41175693)
chr5 (338-438)||(8675321-8675420)
chr5 (12-140)||(15434918-15435046)
chr5 (338-438)||(36321684-36321784)
chr5 (343-438)||(15952938-15953032)
chr5 (343-437)||(38704090-38704183)
chr5 (369-438)||(10865402-10865471)
chr5 (335-438)||(10649519-10649621)
chr5 (335-406)||(21353259-21353330)
chr5 (335-407)||(189588-189659)
[»] chr4 (31 HSPs)
chr4 (335-438)||(3078792-3078895)
chr4 (338-438)||(42815488-42815588)
chr4 (10-141)||(17263254-17263384)
chr4 (344-438)||(37514025-37514119)
chr4 (17-133)||(44810502-44810618)
chr4 (337-438)||(50831642-50831742)
chr4 (335-407)||(32696673-32696745)
chr4 (335-438)||(12138937-12139039)
chr4 (343-438)||(46405867-46405961)
chr4 (336-438)||(1815887-1815988)
chr4 (337-435)||(22819736-22819833)
chr4 (334-404)||(35936083-35936153)
chr4 (342-436)||(42491160-42491253)
chr4 (38-139)||(12880060-12880161)
chr4 (338-438)||(13086106-13086205)
chr4 (335-407)||(17683456-17683527)
chr4 (17-105)||(28571771-28571859)
chr4 (93-137)||(48747466-48747510)
chr4 (346-405)||(24990231-24990290)
chr4 (337-407)||(2999227-2999296)
chr4 (347-437)||(13104279-13104368)
chr4 (336-405)||(47744398-47744468)
chr4 (342-411)||(1140720-1140789)
chr4 (19-140)||(18464168-18464289)
chr4 (335-404)||(27371258-27371327)
chr4 (340-405)||(34995437-34995502)
chr4 (336-408)||(54669470-54669541)
chr4 (345-405)||(23662211-23662271)
chr4 (342-406)||(25221616-25221680)
chr4 (335-399)||(33423461-33423525)
chr4 (346-438)||(52895312-52895404)
[»] chr8 (11 HSPs)
chr8 (11-139)||(10647298-10647427)
chr8 (338-438)||(10644689-10644789)
chr8 (336-435)||(36885374-36885472)
chr8 (335-405)||(6445296-6445366)
chr8 (342-406)||(5740677-5740741)
chr8 (338-438)||(30439394-30439493)
chr8 (17-80)||(14625879-14625942)
chr8 (338-405)||(26000657-26000724)
chr8 (336-438)||(24795332-24795434)
chr8 (343-408)||(4658147-4658211)
chr8 (343-408)||(36568075-36568139)
[»] chr3 (20 HSPs)
chr3 (335-438)||(29573240-29573343)
chr3 (17-147)||(32197680-32197809)
chr3 (342-431)||(45754729-45754819)
chr3 (338-438)||(27718673-27718773)
chr3 (68-140)||(10942367-10942439)
chr3 (334-438)||(51465798-51465901)
chr3 (336-438)||(6999254-6999355)
chr3 (336-404)||(9311158-9311226)
chr3 (342-430)||(29373735-29373823)
chr3 (335-403)||(46965985-46966053)
chr3 (342-405)||(12762581-12762644)
chr3 (335-438)||(41281606-41281708)
chr3 (338-404)||(46965806-46965872)
chr3 (338-438)||(36412207-36412307)
chr3 (336-404)||(8709493-8709561)
chr3 (336-404)||(9061380-9061448)
chr3 (338-438)||(24095294-24095393)
chr3 (390-438)||(26672482-26672530)
chr3 (18-90)||(27820497-27820569)
chr3 (338-438)||(49761391-49761490)
[»] chr7 (11 HSPs)
chr7 (348-438)||(46829563-46829653)
chr7 (338-438)||(1471178-1471278)
chr7 (336-438)||(33775023-33775125)
chr7 (342-438)||(10700078-10700172)
chr7 (21-126)||(9788744-9788849)
chr7 (337-438)||(7817720-7817820)
chr7 (13-81)||(24234920-24234988)
chr7 (342-405)||(6109862-6109925)
chr7 (330-405)||(11352854-11352928)
chr7 (337-435)||(41458683-41458780)
chr7 (337-438)||(28036828-28036928)
[»] chr1 (24 HSPs)
chr1 (338-438)||(46281520-46281620)
chr1 (338-438)||(35136928-35137027)
chr1 (338-439)||(8200158-8200258)
chr1 (338-438)||(47721493-47721592)
chr1 (338-438)||(47728485-47728584)
chr1 (338-438)||(48220032-48220131)
chr1 (337-404)||(11597754-11597821)
chr1 (14-133)||(25784284-25784403)
chr1 (93-142)||(36976830-36976880)
chr1 (334-408)||(51436654-51436728)
chr1 (344-437)||(43769703-43769796)
chr1 (337-438)||(50328028-50328128)
chr1 (338-438)||(48326052-48326150)
chr1 (342-406)||(51571238-51571302)
chr1 (336-435)||(36577298-36577396)
chr1 (335-438)||(40316829-40316931)
chr1 (342-408)||(41507086-41507151)
chr1 (343-405)||(43367794-43367856)
chr1 (335-404)||(29154896-29154964)
chr1 (343-403)||(2211085-2211144)
chr1 (338-438)||(13489746-13489845)
chr1 (343-407)||(33358051-33358114)
chr1 (338-438)||(52362566-52362665)
chr1 (343-407)||(52714794-52714857)
[»] scaffold0532 (1 HSPs)
scaffold0532 (335-438)||(11048-11150)


Alignment Details
Target: chr2 (Bit Score: 295; Significance: 1e-165; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 11 - 337
Target Start/End: Complemental strand, 28438892 - 28438566
Alignment:
Q  11 agcaaaggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatat 110  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  28438892 agcaaagatatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatac 28438793  T
Q  111 gagagagtaagtccccgccttaataactatccgaccatttacggaatcctataggattgacgaccttgtacccgtataacctttagaatgattgaggagt 210  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28438792 gagagagtaagtccctgccttaataactatccgaccatttacgaaatcctataggattgacgaccttgtacccgtatgacctttagaatgattgaggagt 28438693  T
Q  211 acttgaaatatggaaggacgctaaattccatcaaaataaccacttaaacgagacttctcatttaaccttgtcatgtacaaccaatttggagaaaagatat 310  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28438692 acttgacatatggaaggacgctaaattccatcagaataaccacttaaacgagacttctcatttaaccttgtcatgtacaaccaatttggagaaaagctat 28438593  T
Q  311 ataaacaaggtgatgcctatagacaaa 337  Q
    |||||||||||||||||||||||||||    
T  28438592 ataaacaaggtgatgcctatagacaaa 28438566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 337 - 438
Target Start/End: Complemental strand, 5032108 - 5032007
Alignment:
Q  337 agaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatag 436  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5032108 agagatgtgttatttgaacaaccttttgatagacaacttatttgacaaccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagtaatag 5032009  T
Q  437 ag 438  Q
    ||    
T  5032008 ag 5032007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 34134658 - 34134758
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||||||||||||||||||| | |||||||||||||||||| |||| |||||||||||||||| || |||| |||||  ||| || ||||||||||||||    
T  34134658 gaggtgtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaaggaagagtaggttttgacacgaaaatcaaagcaataga 34134757  T
Q  438 g 438  Q
    |    
T  34134758 g 34134758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 438
Target Start/End: Original strand, 23352792 - 23352894
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaat 434  Q
    ||||||| ||||||||||||||| | |||| | |||||||||| ||||| |||| ||||||||||||||||||| || || |||| || | |||||||||    
T  23352792 aaagaggagtgttatttgaacaaccatttggttgacaacttatgggacaaccat-aatttacaaagaaaaagtatgtatttgcacgaaaaccaaagcaat 23352890  T
Q  435 agag 438  Q
    ||||    
T  23352891 agag 23352894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 25086504 - 25086408
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    |||||||||||||||||||| | |||||| ||||||||||| |||| ||||||| ||| |||| ||||||| || || | ||||| || |||||||||    
T  25086504 gaggtgtgttatttgaacaa-catttgattgacaacttatttgacaaccataaaattataaagtaaaagtatgtattggaacaaaaataaaagcaata 25086408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 404
Target Start/End: Complemental strand, 44050202 - 44050132
Alignment:
Q  334 caaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    |||||||||||||||||||||||| | ||||   |||||||| |  |||| ||||||||||||||||||||    
T  44050202 caaagaggtgtgttatttgaacaaccatttgtgcgacaacttttgagacaaccataaatttacaaagaaaa 44050132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 44254779 - 44254715
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagta 408  Q
    ||||||||||||||| | |||||| |||||||||| ||| | |||| |||||||||||||||||||    
T  44254779 gtgttatttgaacaaccatttgattgacaacttatgggataaccat-aatttacaaagaaaaagta 44254715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 9634329 - 9634392
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagt 407  Q
    ||||||||||||||||| |||| | |||||||| ||| ||| |||| ||||||||||||||||||    
T  9634329 gtgttatttgaacaatcatttggttgacaactttttgaacaaccat-aatttacaaagaaaaagt 9634392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 438
Target Start/End: Original strand, 2842771 - 2842868
Alignment:
Q  344 tgttatttgaacaatcttttgatagacaacttattggacagccataaatt---tacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    ||||||||||| || | ||||||||||||||||||  ||| |||||||||   || |||||||| ||| ||||| ||||||| ||||  |||||||||    
T  2842771 tgttatttgaataaccatttgatagacaacttatttaacaaccataaatttaataaaaagaaaatgtaggttttggcacaaaaatcattgcaatagag 2842868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 422
Target Start/End: Original strand, 3012737 - 3012823
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaa 422  Q
    ||||||| ||||||||||||||| | |||| | |||||||||| ||||| |||| |||||  |||||||||||| || || |||||||    
T  3012737 aaagaggagtgttatttgaacaaccatttggttgacaacttatgggacaaccat-aatttttaaagaaaaagtaggtatttgcacaaa 3012823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 404
Target Start/End: Original strand, 14890979 - 14891042
Alignment:
Q  341 gtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    ||||||||||||||||| | ||||||  ||||||||| | ||| ||||| ||||||||||||||    
T  14890979 gtgtgttatttgaacaaccatttgattaacaacttatggaacaaccatagatttacaaagaaaa 14891042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 22525889 - 22525983
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    ||||||||||||||| | |||||| || ||||| |  |||| |||||| ||||||||||||||||| |  || |||| || |||||||||||||||    
T  22525889 gtgttatttgaacaaccatttgattgataacttttgagacaaccataa-tttacaaagaaaaagtaggcatttgcacgaaaatcaaagcaatagag 22525983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 406
Target Start/End: Original strand, 1907650 - 1907719
Alignment:
Q  337 agaggtgtgttatttgaacaatctttt-gatagacaacttattggacagccataaatttacaaagaaaaag 406  Q
    |||| |||||||||||||||||| ||| ||| |||||||| |  |||| ||||||||||||||||||||||    
T  1907650 agagttgtgttatttgaacaatcatttagat-gacaacttgtatgacaaccataaatttacaaagaaaaag 1907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 404
Target Start/End: Complemental strand, 14255486 - 14255420
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    |||||||||||||||||||| | |||    |||||||| | ||||| ||||||||||||||||||||    
T  14255486 gaggtgtgttatttgaacaaccatttatgcgacaacttttgggacaaccataaatttacaaagaaaa 14255420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 414
Target Start/End: Complemental strand, 35334706 - 35334628
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagtttt 414  Q
    ||||||| ||||||||||| |||| ||||||  ||| || |||| ||| ||||||||||| |||||||| ||| |||||    
T  35334706 aagaggtatgttatttgaataatcatttgattaacatctcattgaacaaccataaatttataaagaaaacgtaggtttt 35334628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 404
Target Start/End: Original strand, 44977391 - 44977453
Alignment:
Q  342 tgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    |||||||||||||||| | |||||  || |||||||  |||| ||||||||||||||||||||    
T  44977391 tgtgttatttgaacaaccatttgaacgaaaacttatgagacaaccataaatttacaaagaaaa 44977453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 13518652 - 13518713
Alignment:
Q  42 ataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaat 103  Q
    |||||||||| ||||| |||| ||||| ||||||||||| | |||||||| |||| ||||||    
T  13518652 ataggtaaaagtggttcctttagatgataatttaggaatttctactatgtttatgtttcaat 13518713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 438
Target Start/End: Original strand, 34119539 - 34119639
Alignment:
Q  337 agaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatag 436  Q
    ||||| |||| |||||||||| | |||| | ||||||||||  ||||  ||||| |||||||||||||||||||| ||  ||| || |||||| ||||||    
T  34119539 agaggagtgtaatttgaacaaccatttggttgacaacttatgagacactcataa-tttacaaagaaaaagtaagtattcacacgaaaatcaaaacaatag 34119637  T
Q  437 ag 438  Q
    ||    
T  34119638 ag 34119639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 5054740 - 5054692
Alignment:
Q  390 aatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    ||||||||||||||||||| || || |||| || |||||||||||||||    
T  5054740 aatttacaaagaaaaagtaggtatttgcacgaaaatcaaagcaatagag 5054692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 6896026 - 6895978
Alignment:
Q  390 aatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    |||||||||||||||||||||| || ||||| | |||||| ||||||||    
T  6896026 aatttacaaagaaaaagtaagtatttgcacagaaatcaaaacaatagag 6895978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 13765586 - 13765515
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagt 407  Q
    ||||||| ||||||||||||||| | |||| | |||||||| | ||||| |||| |||||||||| |||||||    
T  13765586 aaagaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccat-aatttacaaataaaaagt 13765515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 15269993 - 15269945
Alignment:
Q  390 aatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    ||||||||||||||||||| || || |||| || |||||||||||||||    
T  15269993 aatttacaaagaaaaagtaggtatttgcacgaaaatcaaagcaatagag 15269945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 34570479 - 34570581
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaat 434  Q
    |||||||||||||||||||| || |||||||||||||| ||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  34570479 aaagaggtgtgttatttgaataaccttttgatagacaatttatttgacaaccataaatttataaagaaaaaataagttttagcacaaatatcaaagcaat 34570578  T
Q  435 aga 437  Q
    |||    
T  34570579 aga 34570581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 11005066 - 11005205
Alignment:
Q  21 tgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatatgagagagtaa 120  Q
    |||||||||||||| |||||||||||||||| ||||| |||| ||||||| ||||||||||| || ||||  |||  |||| |||| || ||||| ||||    
T  11005066 tgtggtgaaattctaagattcataggtaaaagtggttcctttagatgacactttaggaatatcta-tatgcttatatttcagttacctacgagagtgtaa 11005164  T
Q  121 gtccccgccttaataactatccgaccatttacggaatccta 161  Q
     ||||| |||| ||||||||| |||||| |||| |||||||    
T  11005165 ctccccaccttgataactatctgaccatgtacgaaatccta 11005205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 24322427 - 24322544
Alignment:
Q  24 ggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatatgagagagtaagtc 123  Q
    ||||||||| | || ||||||| ||||| |||||  ||| ||||||||||||||| ||| |||||||| |||| ||||||||||| ||| ||  ||||||    
T  24322427 ggtgaaattataagtttcatagataaaagtggttcatttagatgacaatttaggactatctactatgtttatgtttcaattacatgtgaaagtataagtc 24322526  T
Q  124 cccgccttaataactatc 141  Q
     || ||||||||||||||    
T  24322527 tccaccttaataactatc 24322544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 435
Target Start/End: Original strand, 6531065 - 6531164
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaat 434  Q
    ||||||| ||||||||||||||| | |||| | || |||| || ||||| |||||| ||||||||||||||||| || || |||| || |||||||||||    
T  6531065 aaagaggagtgttatttgaacaaccatttggttgataactaatgggacaaccataa-tttacaaagaaaaagtatgtatttgcacgaaaatcaaagcaat 6531163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 13143270 - 13143369
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||||||||| | |||| | |||||||| | ||||| |||||| ||||||||||||||||  || || |||| || ||||||||||||||    
T  13143270 gaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataa-tttacaaagaaaaagtttgtatttgcacgaaaatcaaagcaataga 13143368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 404
Target Start/End: Complemental strand, 33656955 - 33656888
Alignment:
Q  337 agaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    |||| |||||||||||||||| | |||||| ||||| ||||| |||| ||||||||||||||| ||||    
T  33656955 agagatgtgttatttgaacaaccatttgattgacaatttatttgacaaccataaatttacaaaaaaaa 33656888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 438
Target Start/End: Original strand, 32459402 - 32459503
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    |||||| |||||||||||||||   |||||| |||||||| | ||||| |||| ||||||||||||||||||  || || |||| || | ||||||||||    
T  32459402 aagaggagtgttatttgaacaacaatttgattgacaacttttaggacaaccat-aatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaata 32459500  T
Q  436 gag 438  Q
    |||    
T  32459501 gag 32459503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 3832646 - 3832582
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaa 403  Q
    |||| ||||||||||||||| | |||||| |||||||||| ||||| |||| ||||||||||||||    
T  3832646 gaggagtgttatttgaacaaccatttgattgacaacttatgggacaaccat-aatttacaaagaaa 3832582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 404
Target Start/End: Original strand, 25127717 - 25127784
Alignment:
Q  337 agaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    ||||||||||||||||||||| | ||||   ||||| || | ||||| ||||||||||||||||||||    
T  25127717 agaggtgtgttatttgaacaaccatttgtgcgacaaattctgggacaaccataaatttacaaagaaaa 25127784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Complemental strand, 31749543 - 31749482
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaa 405  Q
    ||||||||||||||||| |||||| |||||||||   |||| |||| ||||||||||||||||    
T  31749543 gtgttatttgaacaatcatttgattgacaacttaagagacaaccat-aatttacaaagaaaaa 31749482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 438
Target Start/End: Original strand, 31883189 - 31883290
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    ||||| ||| ||||||||||||   |||||| ||||| || | ||||| |||||| ||||||||||||||| | || ||  |||||| ||||||||||||    
T  31883189 aagagttgtattatttgaacaactatttgattgacaatttttgggacaaccataattttacaaagaaaaag-aggtcttgacacaaaaatcaaagcaata 31883287  T
Q  436 gag 438  Q
    |||    
T  31883288 gag 31883290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 438
Target Start/End: Original strand, 35213447 - 35213548
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    |||||| ||||||||||||||| | |||| | |||||||| | |||||  ||||| ||||||||||||||||  || || |||| || | ||||||||||    
T  35213447 aagaggagtgttatttgaacaaccatttggttgacaacttttgggacaatcataa-tttacaaagaaaaagttggtatttgcacgaaaaccaaagcaata 35213545  T
Q  436 gag 438  Q
    |||    
T  35213546 gag 35213548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 26271054 - 26271183
Alignment:
Q  17 ggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatatgagaga 116  Q
    |||||||||||||||||| |||||| || |||||| |||||  ||| ||| | |||| |||||| | || |||| ||||  ||||||||| | |||| ||    
T  26271054 ggtatgtggtgaaattctaagattcctaagtaaaagtggttcatttagattaaaattaaggaatttctattatgcctatatttcaattacctgtgaggga 26271153  T
Q  117 gtaagtccccgccttaataactatccgacc 146  Q
    |||| | ||| |||||  |||||| |||||    
T  26271154 gtaatttcccaccttatcaactattcgacc 26271183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 30621917 - 30621853
Alignment:
Q  344 tgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagta 408  Q
    |||||||||||||| | |||||| || ||||||| | | | ||||| ||||||||||||||||||    
T  30621917 tgttatttgaacaaccatttgattgataacttatggaataaccatatatttacaaagaaaaagta 30621853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 32046876 - 32046813
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagt 407  Q
    ||||||||||||||| | |||| | |||||||||| ||||| |||| |||||| |||||||||||    
T  32046876 gtgttatttgaacaaccatttggttgacaacttatgggacaaccat-aatttataaagaaaaagt 32046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 5e-32; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 336 - 438
Target Start/End: Complemental strand, 18695504 - 18695402
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||| |||||||||||||||| ||||||| |||||||||| || ||||||||||||    
T  18695504 aagaggtgtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggttttagcacgaaaatcaaagcaata 18695405  T
Q  436 gag 438  Q
    |||    
T  18695404 gag 18695402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 6940037 - 6940137
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||||||||||||||||||| | |||||||||||||||||| |||| |||||||||||||||| ||||||| ||||| |||| || ||||||||||||||    
T  6940037 gaggtgtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagcaataga 6940136  T
Q  438 g 438  Q
    |    
T  6940137 g 6940137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 336 - 438
Target Start/End: Original strand, 9939317 - 9939419
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    |||||||||||||||||||||| | |||||||||||| ||||| |||| |||||||||||||||| ||||||| ||||| |||| || ||||||||||||    
T  9939317 aagaggtgtgttatttgaacaaccatttgatagacaatttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagcaata 9939416  T
Q  436 gag 438  Q
    |||    
T  9939417 gag 9939419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 19964097 - 19963974
Alignment:
Q  17 ggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatatgagaga 116  Q
    |||||||||||||||||| |||||  ||||||||| | ||||| || ||||||||||||| ||| | || ||||  |||  ||||||||| | |||||||    
T  19964097 ggtatgtggtgaaattctaagatttctaggtaaaagttgtttccttagatgacaatttagaaatttctattatgcttataattcaattacctgtgagaga 19963998  T
Q  117 gtaagtccccgccttaataactat 140  Q
    ||||||| || |||||||||||||    
T  19963997 gtaagtctccaccttaataactat 19963974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 27248057 - 27248177
Alignment:
Q  17 ggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatatgagaga 116  Q
    |||||||||||||||| | |||||| ||||||||| ||||| ||||  ||  |||||||||||| | |||||||  |||| ||||||| ||| |||||||    
T  27248057 ggtatgtggtgaaattttaagattcttaggtaaaagtggttcctttatatatcaatttaggaatttatactatgcatatgtttcaattgcatgtgagaga 27248156  T
Q  117 gtaagtccccgccttaataac 137  Q
      ||||| ||| |||||||||    
T  27248157 caaagtctccgtcttaataac 27248177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 336 - 438
Target Start/End: Original strand, 41175592 - 41175693
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    |||||| ||||||||||||||| | |||| | ||||||||||  |||| |||||| ||||||||||||||||  || || |||| || ||||||||||||    
T  41175592 aagaggagtgttatttgaacaaccatttggttgacaacttatgtgacaaccataa-tttacaaagaaaaagtgggtatttgcacgaagatcaaagcaata 41175690  T
Q  436 gag 438  Q
    |||    
T  41175691 gag 41175693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 8675321 - 8675420
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||||||||| | |||| | |||||||| | ||||| |||||| ||||||||||||||||  || || |||| || ||||||||||||||    
T  8675321 gaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataa-tttacaaagaaaaagttggtatttgcacgaaaatcaaagcaataga 8675419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 15434918 - 15435046
Alignment:
Q  12 gcaaaggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatatg 111  Q
    |||| ||||||| || ||||||| ||||||||| | |||| || || |||| ||||| |||||||||||||  ||| ||  |||| ||||||||  ||||    
T  15434918 gcaagggtatgtcgtcaaattctaagattcatacgcaaaagtgattcctttagatgaaaatttaggaatatcaactctgcttatgtttcaattatctatg 15435017  T
Q  112 agagagtaagtccccgccttaataactat 140  Q
    |||| |||||| | || ||||||||||||    
T  15435018 agagtgtaagttctcgtcttaataactat 15435046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 36321684 - 36321784
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||||||||||||||||||| | ||||||  ||||||||||| | | ||||| |||||||||||||||  | || ||  |||||| || |||||||||||    
T  36321684 gaggtgtgttatttgaacaaccatttgattaacaacttattgaaaaaccatagatttacaaagaaaaatcatgtattgacacaaaaataaaagcaataga 36321783  T
Q  438 g 438  Q
    |    
T  36321784 g 36321784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 15952938 - 15953032
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    ||||||||||||||| | |||| | ||||||||||  |||| |||||| ||||||||||||||||  || || |||| || |||||||||||||||    
T  15952938 gtgttatttgaacaaccatttggttgacaacttatgtgacaaccataa-tttacaaagaaaaagtgggtatttgcacgaaaatcaaagcaatagag 15953032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 437
Target Start/End: Original strand, 38704090 - 38704183
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    ||||||||||||||| | ||||||  ||||||| | ||||| |||||| ||||||||||||||||  || || |||| || ||||||||||||||    
T  38704090 gtgttatttgaacaaccatttgattaacaacttttgggacaaccataa-tttacaaagaaaaagttggtatttgcacgaaaatcaaagcaataga 38704183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 438
Target Start/End: Complemental strand, 10865471 - 10865402
Alignment:
Q  369 acaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    |||||||||| |||| ||||| ||||||||||||||||||||| ||  ||| || ||||||| |||||||    
T  10865471 acaacttatttgacaaccatagatttacaaagaaaaagtaagtattgacacgaaaatcaaagtaatagag 10865402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 10649621 - 10649519
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaat 434  Q
    ||||||| ||||||||||||||| | |||| | |||||||| |  |||| |||| ||||||||||||||||||  || |  |||| || |||||||||||    
T  10649621 aaagaggagtgttatttgaacaaccatttggttgacaacttttgtgacaaccat-aatttacaaagaaaaagttggtatgtgcacgaaaatcaaagcaat 10649523  T
Q  435 agag 438  Q
    ||||    
T  10649522 agag 10649519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 406
Target Start/End: Complemental strand, 21353330 - 21353259
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaag 406  Q
    |||||| || ||||||| ||||| | |||||| |||||||| | ||||| |||||| |||||||||||||||    
T  21353330 aaagagttgagttatttaaacaaccatttgattgacaacttttgggacaaccataattttacaaagaaaaag 21353259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 189588 - 189659
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagt 407  Q
    ||||||| ||||||||||||||||| |||| | |||||||| | |||||  ||| |||||| |||||||||||    
T  189588 aaagaggagtgttatttgaacaatcatttggttgacaacttttgggacaatcat-aatttataaagaaaaagt 189659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 335 - 438
Target Start/End: Original strand, 3078792 - 3078895
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaat 434  Q
    |||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||| ||||||| ||||| |||| || |||||||||||    
T  3078792 aaagaggtgtcttatttgaacaatcatttgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagcaat 3078891  T
Q  435 agag 438  Q
    ||||    
T  3078892 agag 3078895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 42815588 - 42815488
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||||||||||||||||||| | |||||||||||||||||| |||| |||||||||||||||| ||||||| ||||| |||| || ||||||||||||||    
T  42815588 gaggtgtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggtttttgcacgaaaatcaaagcaataga 42815489  T
Q  438 g 438  Q
    |    
T  42815488 g 42815488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 17263384 - 17263254
Alignment:
Q  10 tagcaaaggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacata 109  Q
    |||||| |||||||| ||||||||| |||||| ||||||||| ||||| ||||  | |||||||||||||| | |||||||||||||  |||||||| |     
T  17263384 tagcaagggtatgtgatgaaattctaagattcctaggtaaaagtggtt-ctttaaacgacaatttaggaatttctactatgtctatgtatcaattacttg 17263286  T
Q  110 tgagagagtaagtccccgccttaataactatc 141  Q
    ||||||||||||||||| |  |||||||||||    
T  17263285 tgagagagtaagtccccacaataataactatc 17263254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 438
Target Start/End: Original strand, 37514025 - 37514119
Alignment:
Q  344 tgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    |||||||||||||| | ||||||||| || ||||| |||| |||||||||||||||||||||||| ||||| |||| || |||||||||||||||    
T  37514025 tgttatttgaacaaccatttgatagagaatttatttgacaaccataaatttacaaagaaaaagtaggttttggcacgaaaatcaaagcaatagag 37514119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 44810618 - 44810502
Alignment:
Q  17 ggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatatgagaga 116  Q
    |||||||||| ||||||| |||||||||||| ||| |||||||||| ||||| ||||||| ||||| |||||||  |||| ||||||||  ||||||||     
T  44810618 ggtatgtggtaaaattctaagattcataggtgaaagtggtttctttagatgaaaatttagaaatatctactatgcttatgtttcaattatctatgagagt 44810519  T
Q  117 gtaagtccccgccttaa 133  Q
    |||||||| || |||||    
T  44810518 gtaagtcctcgtcttaa 44810502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 438
Target Start/End: Original strand, 50831642 - 50831742
Alignment:
Q  337 agaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatag 436  Q
    |||| |||||||||||||||| | |||||| |||||||| | ||||| |||||| ||||||||||||||| | || ||  |||||| |||||||||||||    
T  50831642 agagttgtgttatttgaacaaccatttgattgacaacttttgggacaaccataattttacaaagaaaaag-aggtcttgacacaaaaatcaaagcaatag 50831740  T
Q  437 ag 438  Q
    ||    
T  50831741 ag 50831742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 32696673 - 32696745
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagt 407  Q
    ||||||||||||||||||||||| | |||| | ||||| |||||| ||| |||||||||||||||| ||||||    
T  32696673 aaagaggtgtgttatttgaacaaccatttggttgacaatttattgtacaaccataaatttacaaagtaaaagt 32696745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 12139039 - 12138937
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaat 434  Q
    |||||||  |||||||||||||| | |||||| || |||||||   ||| |||||| ||||||||||||||||| || || ||||||| ||||||| |||    
T  12139039 aaagaggaatgttatttgaacaaccatttgattgataacttatgtaacaaccataa-tttacaaagaaaaagtaggtatttgcacaaaaatcaaagtaat 12138941  T
Q  435 agag 438  Q
    ||||    
T  12138940 agag 12138937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 46405867 - 46405961
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    ||||||||||||||||| |||| | || || || ||||||| |||||| ||||||||||||||||  || || |||| || |||||||||||||||    
T  46405867 gtgttatttgaacaatcatttggttgataattttttggacaaccataa-tttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagag 46405961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 438
Target Start/End: Original strand, 1815887 - 1815988
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    |||||| ||||||||||||||| | | || | ||||||||||  ||||||||| ||||||||||||||||||   | || ||||||| |||||| |||||    
T  1815887 aagaggagtgttatttgaacaaccatctggttgacaacttatgtgacagccat-aatttacaaagaaaaagtggatatttgcacaaaaatcaaaacaata 1815985  T
Q  436 gag 438  Q
    |||    
T  1815986 gag 1815988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 435
Target Start/End: Complemental strand, 22819833 - 22819736
Alignment:
Q  337 agaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    ||||| ||||||||||||||| | |||| | |||||||| | ||||| |||||| ||||||||||||||||  || || |||| || ||||||||||||    
T  22819833 agaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataa-tttacaaagaaaaagttggtatttgcacgaaaatcaaagcaata 22819736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 404
Target Start/End: Complemental strand, 35936153 - 35936083
Alignment:
Q  334 caaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    |||||||||||||||||||||||||| ||||   |||||||| | ||||| ||||| ||| ||||||||||    
T  35936153 caaagaggtgtgttatttgaacaatcatttgtgtgacaacttttaggacaaccatacattcacaaagaaaa 35936083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 436
Target Start/End: Complemental strand, 42491253 - 42491160
Alignment:
Q  342 tgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatag 436  Q
    |||||||||||||||| | |||||| |||||||| | ||||| |||||| || |||||||||||| | || || ||||||| | |||||||||||    
T  42491253 tgtgttatttgaacaaccatttgattgacaacttttgggacaaccataatttcacaaagaaaaag-aggtattggcacaaaaaccaaagcaatag 42491160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 12880161 - 12880060
Alignment:
Q  38 attcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatatgagagagtaagtccccgccttaataac 137  Q
    |||||||||||||| | |||  ||| ||||||||||||| ||||| |||||||  |||  ||||||||| | |||||| |||  ||| ||||||||||||    
T  12880161 attcataggtaaaagttgttcatttagatgacaatttagaaatatctactatgcttatatttcaattacttgtgagagtgtagctcctcgccttaataac 12880062  T
Q  138 ta 139  Q
    ||    
T  12880061 ta 12880060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 13086205 - 13086106
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||||||||| | ||||||  | ||||| | ||||| |||||| ||||||||||||||||  || || |||| || ||||||||||||||    
T  13086205 gaggagtgttatttgaacaaccgtttgattaataacttttgggacaaccataa-tttacaaagaaaaagttggtatttgcacgaaaatcaaagcaataga 13086107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 17683527 - 17683456
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagt 407  Q
    ||||||| ||||||||||||||| | |||| | |||||||| | ||||| |||| ||||||||||||||||||    
T  17683527 aaagaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccat-aatttacaaagaaaaagt 17683456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 28571859 - 28571771
Alignment:
Q  17 ggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaatta 105  Q
    |||||||||||||||||| | |||  ||||||||| ||||| |||| ||||| ||||||||||| | ||  ||| ||||| ||||||||    
T  28571859 ggtatgtggtgaaattctaaaatttctaggtaaaagtggttcctttagatgataatttaggaatttctatcatgcctatgtttcaatta 28571771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 48747510 - 48747466
Alignment:
Q  93 tatggttcaattacatatgagagagtaagtccccgccttaataac 137  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||    
T  48747510 tatgtttcaattatctatgagagagtaagtccccgccttaataac 48747466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 405
Target Start/End: Complemental strand, 24990290 - 24990231
Alignment:
Q  346 ttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaa 405  Q
    ||||||||| |||| ||||   |||||||||| ||||| |||||||||||||||||||||    
T  24990290 ttatttgaataatcatttgtatgacaacttatgggacaaccataaatttacaaagaaaaa 24990231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 407
Target Start/End: Complemental strand, 2999296 - 2999227
Alignment:
Q  337 agaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagt 407  Q
    ||||| ||||||||||||||| | ||| || |||||||| | ||||| |||| ||||||||||||||||||    
T  2999296 agaggagtgttatttgaacaaccatttaattgacaacttttaggacaaccat-aatttacaaagaaaaagt 2999227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 437
Target Start/End: Original strand, 13104279 - 13104368
Alignment:
Q  347 tatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    ||||||||||| | |||||| |||||||||   |||| |||||| |||||||||||||||||  | || ||||||| | ||||||||||||    
T  13104279 tatttgaacaaccatttgattgacaacttacatgacaaccataa-tttacaaagaaaaagtagatatttgcacaaacaccaaagcaataga 13104368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 405
Target Start/End: Original strand, 47744398 - 47744468
Alignment:
Q  336 aagaggtgtgttatttgaacaa-tcttttgatagacaacttattggacagccataaatttacaaagaaaaa 405  Q
    ||||| |||||||||||||||| | ||||||| || ||||| | ||||| |||||| ||||||||||||||    
T  47744398 aagagttgtgttatttgaacaactattttgattgataacttttgggacaaccataattttacaaagaaaaa 47744468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 411
Target Start/End: Complemental strand, 1140789 - 1140720
Alignment:
Q  342 tgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagt 411  Q
    |||||||||||||||||  ||| ||   ||||||||  |||| ||||| |||||||||||||||||||||    
T  1140789 tgtgttatttgaacaattattttattcgcaacttatgtgacaaccatagatttacaaagaaaaagtaagt 1140720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 18464289 - 18464168
Alignment:
Q  19 tatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatatgagagagt 118  Q
    ||||| |||||||| | ||||| |||||||||| ||||| || | |||| |||||||| ||||| ||| ||   || | ||||||||| |||| ||| ||    
T  18464289 tatgttgtgaaattttaagattaataggtaaaattggttcctctagatgtcaatttagaaatatctacaatacttaagtttcaattacctatgggagtgt 18464190  T
Q  119 aagtccccgccttaataactat 140  Q
    |||||   ||||||||||||||    
T  18464189 aagtctttgccttaataactat 18464168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 404
Target Start/End: Complemental strand, 27371327 - 27371258
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    |||||||||||||||||||||||   |||  | || |||||||  |||| ||||||||||||||||||||    
T  27371327 aaagaggtgtgttatttgaacaacaatttatttgagaacttatgagacaaccataaatttacaaagaaaa 27371258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 405
Target Start/End: Complemental strand, 34995502 - 34995437
Alignment:
Q  340 ggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaa 405  Q
    |||||||||||||||||||| |||| | || |||||   ||||| ||||||||||| |||||||||    
T  34995502 ggtgtgttatttgaacaatcatttgtttgataactttagggacaaccataaatttataaagaaaaa 34995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 54669470 - 54669541
Alignment:
Q  336 aagaggtgtgttatttgaacaatct-tttgatagacaacttattggacagccataaatttacaaagaaaaagta 408  Q
    |||||| ||||||||||||||| |  |||||| ||||||||||| |||| |||||| |||||||||||||||||    
T  54669470 aagaggagtgttatttgaacaaccaatttgat-gacaacttatttgacaaccataa-tttacaaagaaaaagta 54669541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 405
Target Start/End: Original strand, 23662211 - 23662271
Alignment:
Q  345 gttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaa 405  Q
    ||||||||||||| | ||| || ||||| ||||| || | |||||||||||||||||||||    
T  23662211 gttatttgaacaaccatttaattgacaatttatttgataaccataaatttacaaagaaaaa 23662271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 25221616 - 25221680
Alignment:
Q  342 tgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaag 406  Q
    |||||||||||||||| | |||||||||||||||   ||||| |||||| |||| |||| |||||    
T  25221616 tgtgttatttgaacaaccatttgatagacaactttggggacaaccataattttataaaggaaaag 25221680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 33423525 - 33423461
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaa 399  Q
    |||||| ||||||||||| |||| | ||| || ||||||||||| || | |||||||||||||||    
T  33423525 aaagagatgtgttatttgcacaaccattttatggacaacttatttgataaccataaatttacaaa 33423461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 438
Target Start/End: Complemental strand, 52895404 - 52895312
Alignment:
Q  346 ttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    |||||||||||| | |||||| ||||||| ||| |||| ||||  |||||||||||||| |||  | ||  ||| || |||||||||||||||    
T  52895404 ttatttgaacaaccatttgattgacaactcatttgacaaccatggatttacaaagaaaatgtagatattgacacgaaaatcaaagcaatagag 52895312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 10647427 - 10647298
Alignment:
Q  11 agcaaaggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatat 110  Q
    ||||| ||||||||||||||||   ||||||||| |||||| |||||||||| ||||||||||||||||||| |||||||  | || ||||||||| |||    
T  10647427 agcaagggtatgtggtgaaatttgaagattcatatgtaaaagtggtttctttagatgacaatttaggaatatatactatgattctgtttcaattacctat 10647328  T
Q  111 gagagag-taagtccccgccttaataacta 139  Q
    ||||||| ||||||||| ||||||||||||    
T  10647327 gagagagttaagtccccaccttaataacta 10647298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 10644689 - 10644789
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||||||||||||||||||| | |||||||||||||||||| |||| |||||||||||||||| ||||||| ||||| |||| || || |||||||||||    
T  10644689 gaggtgtgttatttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaattaaagcaataga 10644788  T
Q  438 g 438  Q
    |    
T  10644789 g 10644789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 435
Target Start/End: Original strand, 36885374 - 36885472
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    |||||| ||||||||||||||| | |||| | |||||||||| ||||| |||| ||||||||||||||||||| || ||  ||| || ||||||||||||    
T  36885374 aagaggagtgttatttgaacaaccatttggtggacaacttatgggacaaccat-aatttacaaagaaaaagtaggtattgacacgaaaatcaaagcaata 36885472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 6445366 - 6445296
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaa 405  Q
    |||||| |||||||||||||| | | |||||| |||||||||| ||||| ||||||||||||||| |||||    
T  6445366 aaagagatgtgttatttgaacgaccatttgattgacaacttatgggacaaccataaatttacaaaaaaaaa 6445296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 5740677 - 5740741
Alignment:
Q  342 tgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaag 406  Q
    |||||||||||||||  | ||| ||||||||||| | ||||| |||||| |||||||||||||||    
T  5740677 tgtgttatttgaacagccattttatagacaacttttaggacaaccataattttacaaagaaaaag 5740741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 30439394 - 30439493
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||||||||| | |||| | || |||||||  |||| |||||| |||||||||||||| | ||| || |||| || ||||||||||||||    
T  30439394 gaggagtgttatttgaacaaccatttggttgataacttatgtgacaaccataa-tttacaaagaaaaaatgagtatttgcacgaaaatcaaagcaataga 30439492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 14625942 - 14625879
Alignment:
Q  17 ggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaat 80  Q
    |||||||||||||||||| |||||||||  ||||| ||||| |  | |||||||||||||||||    
T  14625942 ggtatgtggtgaaattctaagattcatatttaaaagtggttccgatagatgacaatttaggaat 14625879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 405
Target Start/End: Complemental strand, 26000724 - 26000657
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaa 405  Q
    |||||||||||||||||||||| |||| | |||| ||||| ||||| | ||| ||||||||| |||||    
T  26000724 gaggtgtgttatttgaacaatcatttggttgacatcttatgggacaactatatatttacaaaaaaaaa 26000657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 438
Target Start/End: Complemental strand, 24795434 - 24795332
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    ||||||| ||||||||||||||   |||| | ||||||||||  |||| ||||||||||| |||| | ||||| || ||| ||| ||  |||||||||||    
T  24795434 aagaggtatgttatttgaacaactatttgtttgacaacttatgagacaaccataaatttataaaggagaagtaggtattaacactaaagtcaaagcaata 24795335  T
Q  436 gag 438  Q
    |||    
T  24795334 gag 24795332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 4658147 - 4658211
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagta 408  Q
    ||||||||||||||| | ||| || |||||||| | ||||| |||| |||||||||||||||||||    
T  4658147 gtgttatttgaacaaccatttaattgacaacttttaggacaaccat-aatttacaaagaaaaagta 4658211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 36568139 - 36568075
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagta 408  Q
    ||||||||||||||| | |||||| |||||||||| ||||| |||| |||||||| | ||||||||    
T  36568139 gtgttatttgaacaaccatttgattgacaacttatgggacaaccat-aatttacacaaaaaaagta 36568075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 438
Target Start/End: Original strand, 29573240 - 29573343
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaat 434  Q
    |||||||| |||||||||||||| | |||||||||||| ||||| |||| |||||||||||||||| ||||||| ||||| |||| || |||||||||||    
T  29573240 aaagaggtatgttatttgaacaaccatttgatagacaatttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagcaat 29573339  T
Q  435 agag 438  Q
    ||||    
T  29573340 agag 29573343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 32197809 - 32197680
Alignment:
Q  17 ggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatatgagaga 116  Q
    |||||||||||||||||| || ||| || ||||   ||||| |||| ||| ||||||||||||| | ||||||||||||| || |||||| | |||||||    
T  32197809 ggtatgtggtgaaattctaaggttcctatgtaacg-tggttcctttagattacaatttaggaatttctactatgtctatgttttaattacctgtgagaga 32197711  T
Q  117 gtaagtccccgccttaataactatccgacca 147  Q
    |||||||||| ||||||||||||||||||||    
T  32197710 gtaagtccccaccttaataactatccgacca 32197680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 342 - 431
Target Start/End: Complemental strand, 45754819 - 45754729
Alignment:
Q  342 tgtgttatttgaacaatcttttgatagacaacttattggacagccataaa-tttacaaagaaaaagtaagttttagcacaaatatcaaagc 431  Q
    |||||||||||||||| | |||||| || |||||||| |||| ||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  45754819 tgtgttatttgaacaaccatttgattgataacttattagacaaccataaaatttacaaagaaaaagtaggttttagcacaaaaatcaaagc 45754729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 27718673 - 27718773
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||||||||||||||||||| | |||||||| |||| |||| |||| |||||||||||||||| ||||||| ||||| |||  || |||||| |||||||    
T  27718673 gaggtgtgttatttgaacaaccatttgatagccaacatatttgacaaccataaatttacaaaggaaaagtaggttttggcatgaaaatcaaaacaataga 27718772  T
Q  438 g 438  Q
    |    
T  27718773 g 27718773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 10942439 - 10942367
Alignment:
Q  68 acaatttaggaatatttactatgtctatggttcaattacatatgagagagtaagtccccgccttaataactat 140  Q
    |||||||||||||||| |||  || | || ||||||||| ||||||||||||||||||| |||||||||||||    
T  10942439 acaatttaggaatattaacttcgtttttgtttcaattacctatgagagagtaagtccccaccttaataactat 10942367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 438
Target Start/End: Original strand, 51465798 - 51465901
Alignment:
Q  334 caaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaa 433  Q
    |||||||| ||||||||||||||| | |||| | |||||||| | ||||| |||| ||||||||||||||||||  || || |||| || ||||||||||    
T  51465798 caaagaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccat-aatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaa 51465896  T
Q  434 tagag 438  Q
    |||||    
T  51465897 tagag 51465901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 336 - 438
Target Start/End: Complemental strand, 6999355 - 6999254
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    |||||| ||||||||||||||| | |||| | |||||||||| ||||| |||| ||||||||| |||||| || || || |||| || ||||||||||||    
T  6999355 aagaggagtgttatttgaacaaccatttggttgacaacttatgggacaaccat-aatttacaatgaaaaaatatgtatttgcacgaaaatcaaagcaata 6999257  T
Q  436 gag 438  Q
    |||    
T  6999256 gag 6999254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 9311226 - 9311158
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    ||||| |||||||||||||||||| |||| |  ||||||||| ||||| ||||| ||||| ||||||||    
T  9311226 aagagttgtgttatttgaacaatcatttgttgaacaacttatgggacaaccatatatttaaaaagaaaa 9311158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 430
Target Start/End: Original strand, 29373735 - 29373823
Alignment:
Q  342 tgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaag 430  Q
    |||||||||||||||| |  ||||| |||||||||||| ||| ||||| ||||| ||||||||| || || ||  |||||| |||||||    
T  29373735 tgtgttatttgaacaaccacttgattgacaacttattgaacaaccatatatttataaagaaaaaataggtattgacacaaaaatcaaag 29373823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 403
Target Start/End: Original strand, 46965985 - 46966053
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaa 403  Q
    ||||||||||||||||||||||| | ||||   |||||||| | |||||  ||||||||||||||||||    
T  46965985 aaagaggtgtgttatttgaacaaccatttgtgtgacaacttttcggacaatcataaatttacaaagaaa 46966053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 405
Target Start/End: Original strand, 12762581 - 12762644
Alignment:
Q  342 tgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaa 405  Q
    |||||||||||||||||| |||    ||||| |||| ||||| |||||||||||||||||||||    
T  12762581 tgtgttatttgaacaatcatttacatgacaatttatgggacaaccataaatttacaaagaaaaa 12762644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 438
Target Start/End: Original strand, 41281606 - 41281708
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaat 434  Q
    ||||||| ||||||||||||||||| |||| | |||||||||| | ||| | | ||||||||||| |||||||| |  || ||||||| | |||| ||||    
T  41281606 aaagaggagtgttatttgaacaatcatttggttgacaacttatggaacaacta-aaatttacaaaaaaaaagtaggcatttgcacaaaaaccaaaacaat 41281704  T
Q  435 agag 438  Q
    ||||    
T  41281705 agag 41281708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 404
Target Start/End: Original strand, 46965806 - 46965872
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    |||||||||||||| ||| ||| ||||   |||||||| | ||||| ||||||||||||||||||||    
T  46965806 gaggtgtgttatttaaacgatcatttgtgtgacaacttttaggacaaccataaatttacaaagaaaa 46965872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 36412307 - 36412207
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgata-gacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatag 436  Q
    |||| ||||||||||||||| | |||| |  |||||||||| ||||| |||||| |||||||||||| | || || || |||| || |||||||||||||    
T  36412307 gaggagtgttatttgaacaaccatttggtttgacaacttatgggacaaccataa-tttacaaagaaagaatatgtatttgcacgaaaatcaaagcaatag 36412209  T
Q  437 ag 438  Q
    ||    
T  36412208 ag 36412207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 8709561 - 8709493
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    |||||||||||||||| ||||||| | |||| |||||||| | ||||| |||||||  || ||||||||    
T  8709561 aagaggtgtgttatttcaacaatcatctgattgacaacttttgggacaaccataaaagtataaagaaaa 8709493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 9061448 - 9061380
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    |||||||||||||||| ||||||| | |||| |||||||| | ||||| |||||||  || ||||||||    
T  9061448 aagaggtgtgttatttcaacaatcatctgattgacaacttttgggacaaccataaaagtataaagaaaa 9061380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 24095294 - 24095393
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||||||||  | |||| | |||||||| |  |||| |||||| ||||||||||||||||| || || |||| || | ||||||||||||    
T  24095294 gaggagtgttatttgaacatccatttggttgacaacttttatgacaaccataa-tttacaaagaaaaagtaggtatttgcacgaaaaccaaagcaataga 24095392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 26672530 - 26672482
Alignment:
Q  390 aatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    |||||||||||||||||||||| || ||||| | |||||| ||||||||    
T  26672530 aatttacaaagaaaaagtaagtatttgcacagaaatcaaaacaatagag 26672482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 27820497 - 27820569
Alignment:
Q  18 gtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatg 90  Q
    |||| |||||||||||| |||||  ||||||||| |||||  ||| ||||||||||||| ||| | |||||||    
T  27820497 gtatctggtgaaattctaagatttttaggtaaaagtggttcttttagatgacaatttagaaatttctactatg 27820569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 49761490 - 49761391
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||||||||||| |||  | |||||||||   ||||  ||||| |||| |||||||||||| || || ||||||| | ||||||||||||    
T  49761490 gaggagtgttatttgaacaatcatttagttgacaacttacatgacaatcataa-tttataaagaaaaagtaggtatttgcacaaaaaccaaagcaataga 49761392  T

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Target: chr7 (Bit Score: 59; Significance: 8e-25; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 348 - 438
Target Start/End: Complemental strand, 46829653 - 46829563
Alignment:
Q  348 atttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    |||||||||| | |||||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||| || |||||||||||||||    
T  46829653 atttgaacaaccatttgatagacaacttatttgacaaccataaatttacaaagaaaaagtaggttttggcacgaaaatcaaagcaatagag 46829563  T

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Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 1471178 - 1471278
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    ||||||||||||||||||||   |||||||||||||||||| |||| |||||||||||||||||| |||||  |||| |||| || ||||||||||||||    
T  1471178 gaggtgtgttatttgaacaactatttgatagacaacttatttgacaaccataaatttacaaagaagaagtagattttggcacgaaaatcaaagcaataga 1471277  T
Q  438 g 438  Q
    |    
T  1471278 g 1471278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 438
Target Start/End: Complemental strand, 33775125 - 33775023
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    ||||| |||||||||||||||||| |||||| ||||||||||| |||| |||| |||||| |||  ||||||| || || | ||||| ||||| ||||||    
T  33775125 aagagatgtgttatttgaacaatcgtttgattgacaacttatttgacaaccatgaatttataaaagaaaagtaggtattggtacaaaaatcaatgcaata 33775026  T
Q  436 gag 438  Q
    |||    
T  33775025 gag 33775023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 438
Target Start/End: Original strand, 10700078 - 10700172
Alignment:
Q  342 tgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatagag 438  Q
    |||||||||||||||||| |||||| |||||||| | ||||| |||||| |||| |||||||||  |||| ||  |||||| |||||||||||||||    
T  10700078 tgtgttatttgaacaatcatttgattgacaacttttgggacaaccataattttataaagaaaaa--aagtcttgacacaaaaatcaaagcaatagag 10700172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 9788744 - 9788849
Alignment:
Q  21 tgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatatgagagagtaa 120  Q
    |||| ||||||| | ||| ||||| ||||||||| || |||| ||||| ||||||| ||| | |||||||  |||| ||||||||| |||||||||||||    
T  9788744 tgtgatgaaattttaagactcataagtaaaaatgtttcctttagatgataatttagaaatctctactatgattatgtttcaattacctatgagagagtaa 9788843  T
Q  121 gtcccc 126  Q
     |||||    
T  9788844 ctcccc 9788849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 438
Target Start/End: Complemental strand, 7817820 - 7817720
Alignment:
Q  337 agaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatag 436  Q
    ||||| ||||||||||||||| | |||| | ||||||||||  |||| |||| ||||||||||||||||||   | || |||| || |||||||||||||    
T  7817820 agaggagtgttatttgaacaaccatttggttgacaacttatgtgacaaccat-aatttacaaagaaaaagtggatatttgcacgaaaatcaaagcaatag 7817722  T
Q  437 ag 438  Q
    ||    
T  7817721 ag 7817720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 24234920 - 24234988
Alignment:
Q  13 caaaggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaata 81  Q
    |||||||||||||||||||| | |||||||||  ||||| ||||||||||  ||| |||| ||||||||    
T  24234920 caaaggtatgtggtgaaattttaagattcatatataaaagtggtttctttatatggcaatgtaggaata 24234988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 405
Target Start/End: Original strand, 6109862 - 6109925
Alignment:
Q  342 tgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaa 405  Q
    ||||| |||||||||||| |||  | ||||||||||||||||  |||| |||||||||||||||    
T  6109862 tgtgtgatttgaacaatcattttgttgacaacttattggacaatcatagatttacaaagaaaaa 6109925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 405
Target Start/End: Original strand, 11352854 - 11352928
Alignment:
Q  330 tagacaaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaa 405  Q
    |||| ||||||| ||||||||||||||| | |||| | |||||||| | ||||| |||| ||||||||||||||||    
T  11352854 tagaaaaagaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccat-aatttacaaagaaaaa 11352928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 435
Target Start/End: Complemental strand, 41458780 - 41458683
Alignment:
Q  337 agaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    ||||| ||||||||||||||| | |||| | |||||||||   |||| |||||| |||| |||||||||||| || || ||||||| |||||| |||||    
T  41458780 agaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataa-tttataaagaaaaagtaggtatttgcacaaaaatcaaaacaata 41458683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 438
Target Start/End: Complemental strand, 28036928 - 28036828
Alignment:
Q  337 agaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatag 436  Q
    ||||| |||||| |||||||| | |||| | |||||||| | ||||| |||||| ||||||||||||||||  || || |||| || | |||||||||||    
T  28036928 agaggagtgttaattgaacaaccatttggttgacaacttttgggacaaccataa-tttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatag 28036830  T
Q  437 ag 438  Q
    ||    
T  28036829 ag 28036828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 46281620 - 46281520
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||||||||||||||||||| | ||||||||||||| |||| |||| |||||||||||||||| ||||||| ||||| |||  || ||||||||||||||    
T  46281620 gaggtgtgttatttgaacaaccatttgatagacaacatatttgacaaccataaatttacaaaggaaaagtaggttttggcatgaaaatcaaagcaataga 46281521  T
Q  438 g 438  Q
    |    
T  46281520 g 46281520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 35137027 - 35136928
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||||||||||| |||| | ||||| || | ||||| |||||| ||||||||||||||||  || || ||||||| ||||||||||||||    
T  35137027 gaggagtgttatttgaacaatcatttggttgacaatttttaggacaaccataa-tttacaaagaaaaagtttgtatttgcacaaaaatcaaagcaataga 35136929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 8200258 - 8200158
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||||||||  |||||| | |||||||||| ||||| |||| ||||||||||||||||||| ||  | |||| || | ||||||||||||    
T  8200258 gaggagtgttatttgaacagccttttggttgacaacttatgggacaaccat-aatttacaaagaaaaagtacgtagttgcacgaaaaccaaagcaataga 8200160  T
Q  438 gg 439  Q
    ||    
T  8200159 gg 8200158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 47721592 - 47721493
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||| ||||| | |||  | |||||||||| ||||| |||||| |||||||||||||||||||| ||  ||| || ||||||||||||||    
T  47721592 gaggagtgttatttaaacaaccatttagtggacaacttatgggacaaccataa-tttacaaagaaaaagtaagtattgacacgaaaatcaaagcaataga 47721494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 47728584 - 47728485
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||| ||||| | |||  | |||||||||| ||||| |||||| |||||||||||||||||||| ||  ||| || ||||||||||||||    
T  47728584 gaggagtgttatttaaacaaccatttagtggacaacttatgggacaaccataa-tttacaaagaaaaagtaagtattgacacgaaaatcaaagcaataga 47728486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 48220032 - 48220131
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||||||||||| |||| | |||||||||| ||| |||||| ||| | ||||||||||||  || || ||||||| ||||||| ||||||    
T  48220032 gaggagtgttatttgaacaatcatttggttgacaacttatgggaaagccat-aatcttcaaagaaaaagttggtatttgcacaaaaatcaaagaaataga 48220130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 404
Target Start/End: Complemental strand, 11597821 - 11597754
Alignment:
Q  337 agaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    ||||||||||||||||||||  | |||| | |||||||||| ||||| ||||| ||||||||||||||    
T  11597821 agaggtgtgttatttgaacatccatttgcttgacaacttatgggacaaccatagatttacaaagaaaa 11597754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 25784403 - 25784284
Alignment:
Q  14 aaaggtatgtggtgaaattctgagattcataggtaaaaatggtttcttttgatgacaatttaggaatatttactatgtctatggttcaattacatatgag 113  Q
    |||||||||||||  ||||   ||||| ||| |||||| ||||| |||| ||||||||||||||||| | | |||||| |||| |||||||||  || ||    
T  25784403 aaaggtatgtggtagaatttaaagattgataagtaaaagtggttcctttagatgacaatttaggaatttcttctatgtttatgtttcaattaccgatcag 25784304  T
Q  114 agagtaagtccccgccttaa 133  Q
    || ||||||||  |||||||    
T  25784303 agtgtaagtccatgccttaa 25784284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 36976880 - 36976830
Alignment:
Q  93 tatggttcaattacatatgagagagtaagtccccgccttaa-taactatcc 142  Q
    |||| ||||||||||| |||||||||||||||||||||||| |||||||||    
T  36976880 tatgtttcaattacatgtgagagagtaagtccccgccttaactaactatcc 36976830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 408
Target Start/End: Original strand, 51436654 - 51436728
Alignment:
Q  334 caaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagta 408  Q
    |||||| || |||||||||||||||  |||| | ||||||||||  |||| ||||| ||||||||||||||||||    
T  51436654 caaagatgtatgttatttgaacaataatttggttgacaacttatatgacaaccatagatttacaaagaaaaagta 51436728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 437
Target Start/End: Complemental strand, 43769796 - 43769703
Alignment:
Q  344 tgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    ||||||||||| |||| |||| | ||||||||||  |||| |||| |||||| ||||||||||||||| ||  || ||| | ||||||||||||    
T  43769796 tgttatttgaataatcatttggttgacaacttatgagacaaccattaatttataaagaaaaagtaagtattttcagaaaaaccaaagcaataga 43769703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 438
Target Start/End: Original strand, 50328028 - 50328128
Alignment:
Q  337 agaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaatag 436  Q
    ||||| ||||||||||||||| | |||| | |||||||| | ||||| |||| ||||||||||||||||||  || || |||| || | |||||||||||    
T  50328028 agaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccat-aatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatag 50328126  T
Q  437 ag 438  Q
    ||    
T  50328127 ag 50328128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 48326150 - 48326052
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||||||||| | |||| | |||||||| ||||||| |||||| ||||||||||||||||  || || | || || ||||||||||||||    
T  48326150 gaggagtgttatttgaacaaccatttggttgacaactt-ttggacaaccataa-tttacaaagaaaaagttggtatttgtacgaaaatcaaagcaataga 48326053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 51571238 - 51571302
Alignment:
Q  342 tgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaag 406  Q
    |||||||||||||||| | |||||| ||||| || | ||||| |||||| |||||||||||||||    
T  51571238 tgtgttatttgaacaaccatttgattgacaatttttgggacaaccataattttacaaagaaaaag 51571302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 435
Target Start/End: Original strand, 36577298 - 36577396
Alignment:
Q  336 aagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaata 435  Q
    |||||| ||||||||||||||| | |||| | |||||||| | ||||| |||| |||||| |||||||||||  || || |||| || ||||||||||||    
T  36577298 aagaggagtgttatttgaacaaccatttggttgacaacttttaggacaaccat-aatttataaagaaaaagttggtatttgcacgaaaatcaaagcaata 36577396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 438
Target Start/End: Original strand, 40316829 - 40316931
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaat 434  Q
    ||||||| ||||||||||||||| | |||| | |||||||| | ||||| |||| |||||| |||||||||||  || || |||| || | |||||||||    
T  40316829 aaagaggagtgttatttgaacaaccatttggttgacaacttttaggacaaccat-aatttataaagaaaaagttggtatttgcacgaaaaccaaagcaat 40316927  T
Q  435 agag 438  Q
    ||||    
T  40316928 agag 40316931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 408
Target Start/End: Original strand, 41507086 - 41507151
Alignment:
Q  342 tgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagta 408  Q
    |||||||||||||||| | |||| | ||||||||||| |||| | || |||||||||||||||||||    
T  41507086 tgtgttatttgaacaaccatttggttgacaacttatttgacaactat-aatttacaaagaaaaagta 41507151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 43367794 - 43367856
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaa 405  Q
    ||||||||||||||||| ||||   |||||||| | | ||| |||||||||||||||||||||    
T  43367794 gtgttatttgaacaatcatttgtgtgacaacttttagaacaaccataaatttacaaagaaaaa 43367856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 404
Target Start/End: Complemental strand, 29154964 - 29154896
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaa 404  Q
    ||||||| ||||||||||||||| | |||| | |||||||||| ||||| | || |||||||||||||||    
T  29154964 aaagaggagtgttatttgaacaaccatttggttgacaacttatgggacaacgat-aatttacaaagaaaa 29154896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 403
Target Start/End: Original strand, 2211085 - 2211144
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaa 403  Q
    ||||||||||||||| | |||||| ||||||||||  ||||||||| | ||||||||||||    
T  2211085 gtgttatttgaacaaccgtttgattgacaacttatgagacagccat-agtttacaaagaaa 2211144  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 13489845 - 13489746
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| |||||||||||||||   |||| | |||||||| | ||||| |||||| ||||||||||||||||  || || |||| || | ||||||||||||    
T  13489845 gaggagtgttatttgaacaactatttggttgacaacttctgggacaaccataa-tttacaaagaaaaagttggtatttgcacgaaaaccaaagcaataga 13489747  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 33358051 - 33358114
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagt 407  Q
    ||||||||||||||| | |||| | ||||||||||  |||| |||| ||||||||||||||||||    
T  33358051 gtgttatttgaacaaccatttggttgacaacttatgtgacaaccat-aatttacaaagaaaaagt 33358114  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 52362665 - 52362566
Alignment:
Q  338 gaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaataga 437  Q
    |||| ||||||||||||||| | |||| | |||||||| | ||||| |||| |||||| |||||||||||  || || |||| || | ||||||||||||    
T  52362665 gaggagtgttatttgaacaaccatttggttgacaacttttaggacaaccat-aatttataaagaaaaagttggtatttgcacgaaaaccaaagcaataga 52362567  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 52714794 - 52714857
Alignment:
Q  343 gtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagt 407  Q
    ||||||||||||||| | |||||| |||||||| | ||||| | || ||||||||||||||||||    
T  52714794 gtgttatttgaacaaccatttgattgacaacttttgggacaacaat-aatttacaaagaaaaagt 52714857  T

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Target: scaffold0532 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 11150 - 11048
Alignment:
Q  335 aaagaggtgtgttatttgaacaatcttttgatagacaacttattggacagccataaatttacaaagaaaaagtaagttttagcacaaatatcaaagcaat 434  Q
    ||||||| ||||||||||||||| |||||| | ||||||||||  ||||  ||| ||||||||||||||||||  || || |||| || |||||| ||||    
T  11150 aaagaggagtgttatttgaacaaccttttggttgacaacttatgtgacaatcat-aatttacaaagaaaaagtgggtatttgcacgaaaatcaaaacaat 11052  T
Q  435 agag 438  Q
    ||||    
T  11051 agag 11048  T

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