View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14349_low_64 (Length: 353)
Name: NF14349_low_64
Description: NF14349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14349_low_64 |
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Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 17 - 343
Target Start/End: Complemental strand, 28819460 - 28819134
Alignment:
| Q |
17 |
aactatttgcagagagattattattttgcatttcacatgttcatgcatgcattatataaaaacaaattgtattacaacttgctaaaacttaccaaatatc |
116 |
Q |
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| T |
28819460 |
aactatttgcagagagattattattttgcatttcacatgttcatgcatgcattatataaaaacaaattgtattacaacttgctaaaacttaccaaatatc |
28819361 |
T |
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| Q |
117 |
tttcnnnnnnnaaacttttatggtggctaatttattttataaaatcaaaagagcatgcatttaataatctcttgttattaaaatatacagtgtaaaattt |
216 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
28819360 |
tttctttttttaaacttttatggtggctaatttattttataaaatcaaaagagcatgcatttaataatctcttgttattaaaatatacagtataaaattt |
28819261 |
T |
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| Q |
217 |
gatggcccttgtatgtggaatgttgagttgctttcattgatttatatctttcacttggataacttaatgtaagtaaaagacaaaacgccacaactttaaa |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28819260 |
gatggcccttgtatgtggaatgttgagttgctttcattgatttatatctttcacttggataacttaatgtaagtaaaagacaaaacgccacaactttaaa |
28819161 |
T |
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| Q |
317 |
aatggcctataatactgggtttctgtg |
343 |
Q |
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|||||||||||||||||||||| |||| |
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| T |
28819160 |
aatggcctataatactgggtttgtgtg |
28819134 |
T |
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