View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14349_low_73 (Length: 333)
Name: NF14349_low_73
Description: NF14349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14349_low_73 |
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Alignment Details
Target: chr3 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 27158777 - 27159106
Alignment:
| Q |
1 |
ataatttgtcgtattttgtatgtcaaatcaaatgtataaggtatatctctagcttggagaatttagacgtctcatatttgagccataattaattccttca |
100 |
Q |
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| T |
27158777 |
ataatttgtcgtattttgtatgtcaaatcaaatgtataaggtatatctctagcttggagaatttagacgtctcacatctgagccataattaattccttta |
27158876 |
T |
|
| Q |
101 |
ttaaccgttatggatgagtccatgtccatgtatttgatacaaagaatttgattctaaatttcaaagtaggtccatgcaatatatggttcaaaaacgatca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27158877 |
ttaaccgttatggatgagtccatgtccatgtatttgatacaaagaatttgattctaaatttcaaagtaggtccatgcaatatatggttcaaaaacgatca |
27158976 |
T |
|
| Q |
201 |
tattctggcccgcaaaaatctatgtatgcatgacttcatattgacgaaacaagaaattactaccttctaaaacatacacctagtatatgttgtgtatata |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
27158977 |
tattctggcccgcaaaaatctatgtatgcatgacttcatattgacgaaacaagaaattactaccttctaaaacatacacctag--tatgttgtgtatata |
27159074 |
T |
|
| Q |
301 |
aatatattttgaatagattatcgtcctttgct |
332 |
Q |
| |
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|||||||||||||||||||||| |||| |||| |
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| T |
27159075 |
aatatattttgaatagattatcatcctatgct |
27159106 |
T |
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