View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14350_high_1 (Length: 317)
Name: NF14350_high_1
Description: NF14350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14350_high_1 |
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Alignment Details
Target: chr3 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 20 - 304
Target Start/End: Original strand, 33727719 - 33728003
Alignment:
| Q |
20 |
atatatataccttcttttctctggtccattttccaaattgaaggagatgctcaagttgagcctttgaaagattttccataatccagtcaaggtaaccttt |
119 |
Q |
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| T |
33727719 |
atatatataccttcttttctctggtccattttccaaattgaaggagatgctcaagttgagcctttgaaatattttccatgatccagtaaaggtagctttt |
33727818 |
T |
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| Q |
120 |
gctacaaaagcattttgtacaaatcatttcatagaatgaatagaagcatctctgactctgactgaagaataagatagtaccacaatttttgtaaattaca |
219 |
Q |
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| T |
33727819 |
gctacaaaaccattttgtacaaatcatttcatagaatgaatagaagcatctctgactctgactgaagaataagatagtaccacaatttttgtaaattaca |
33727918 |
T |
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| Q |
220 |
agagataaaatatgttatactttggtccaatttaatgcagacaaatctcttaaaaatgatgagcaactgtaaagattctctctct |
304 |
Q |
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|||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33727919 |
agagataaaatatgttatacttcggtccaatttaattcatacaaatctcttaaaaatgatgagcaactgtaaagattctctctct |
33728003 |
T |
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