View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14350_low_3 (Length: 293)

Name: NF14350_low_3
Description: NF14350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14350_low_3
NF14350_low_3
[»] chr7 (47 HSPs)
chr7 (161-277)||(33152995-33153111)
chr7 (190-277)||(30082338-30082425)
chr7 (190-280)||(34808204-34808294)
chr7 (190-280)||(48879373-48879463)
chr7 (190-280)||(23106438-23106528)
chr7 (190-280)||(35181177-35181267)
chr7 (190-280)||(43107944-43108034)
chr7 (190-280)||(45598889-45598979)
chr7 (190-277)||(35084143-35084230)
chr7 (190-280)||(22111369-22111459)
chr7 (195-277)||(28608363-28608445)
chr7 (190-280)||(40583130-40583220)
chr7 (190-280)||(48937928-48938018)
chr7 (190-280)||(48942954-48943044)
chr7 (195-280)||(42617661-42617746)
chr7 (27-118)||(33152861-33152952)
chr7 (190-280)||(3157421-3157511)
chr7 (190-280)||(41889156-41889246)
chr7 (190-280)||(47383391-47383481)
chr7 (192-259)||(39348776-39348843)
chr7 (190-280)||(18206358-18206448)
chr7 (190-280)||(19933094-19933184)
chr7 (190-280)||(19964233-19964323)
chr7 (194-280)||(21654160-21654246)
chr7 (190-280)||(36576403-36576493)
chr7 (190-280)||(40560367-40560457)
chr7 (190-280)||(41815732-41815822)
chr7 (195-280)||(7989347-7989432)
chr7 (190-259)||(39337515-39337584)
chr7 (190-265)||(18800828-18800903)
chr7 (190-277)||(29236110-29236196)
chr7 (190-280)||(23731545-23731635)
chr7 (190-280)||(41890281-41890371)
chr7 (190-280)||(32491146-32491236)
chr7 (190-280)||(44600431-44600521)
chr7 (192-278)||(48339303-48339389)
chr7 (190-277)||(28843558-28843645)
chr7 (192-261)||(31769061-31769130)
chr7 (192-261)||(35888068-35888137)
chr7 (209-277)||(40593822-40593890)
chr7 (230-280)||(9818493-9818543)
chr7 (230-280)||(10720418-10720468)
chr7 (190-239)||(6882390-6882439)
chr7 (191-234)||(28941277-28941320)
chr7 (192-280)||(38260308-38260396)
chr7 (205-280)||(4910713-4910788)
chr7 (192-240)||(37767139-37767187)
[»] chr2 (34 HSPs)
chr2 (190-277)||(15068721-15068808)
chr2 (192-276)||(13822854-13822938)
chr2 (190-277)||(9294641-9294728)
chr2 (190-280)||(5091620-5091710)
chr2 (190-280)||(792436-792526)
chr2 (190-280)||(8784381-8784471)
chr2 (190-280)||(14565453-14565543)
chr2 (191-280)||(4033755-4033844)
chr2 (201-270)||(18834000-18834069)
chr2 (190-280)||(21539743-21539833)
chr2 (190-280)||(44803884-44803974)
chr2 (192-280)||(10478166-10478254)
chr2 (190-280)||(4091997-4092087)
chr2 (190-280)||(29514099-29514189)
chr2 (190-280)||(33635322-33635412)
chr2 (190-280)||(38549723-38549813)
chr2 (190-280)||(43075736-43075826)
chr2 (190-280)||(43451491-43451581)
chr2 (190-259)||(28424260-28424329)
chr2 (190-280)||(28492506-28492596)
chr2 (190-280)||(29514555-29514645)
chr2 (190-280)||(35832398-35832488)
chr2 (190-266)||(12872110-12872186)
chr2 (192-252)||(22162308-22162368)
chr2 (192-261)||(20380115-20380184)
chr2 (192-261)||(26998309-26998378)
chr2 (192-261)||(32010094-32010163)
chr2 (192-239)||(8032790-8032837)
chr2 (190-230)||(15858740-15858780)
chr2 (200-266)||(9709514-9709579)
chr2 (195-261)||(32273666-32273732)
chr2 (192-261)||(38070988-38071056)
chr2 (192-261)||(44442123-44442192)
chr2 (232-280)||(10979197-10979245)
[»] chr8 (40 HSPs)
chr8 (190-277)||(41426328-41426415)
chr8 (190-280)||(3099942-3100032)
chr8 (190-280)||(24612562-24612652)
chr8 (190-280)||(27621119-27621209)
chr8 (190-280)||(34713517-34713607)
chr8 (190-280)||(44052610-44052700)
chr8 (190-280)||(44411291-44411381)
chr8 (190-280)||(31133111-31133201)
chr8 (190-280)||(35260046-35260136)
chr8 (190-280)||(37598059-37598149)
chr8 (190-277)||(2238678-2238765)
chr8 (190-280)||(11992717-11992807)
chr8 (190-280)||(27752575-27752665)
chr8 (190-280)||(37567513-37567603)
chr8 (190-280)||(39187222-39187312)
chr8 (190-280)||(44358573-44358663)
chr8 (195-280)||(35344361-35344446)
chr8 (190-280)||(11044046-11044136)
chr8 (190-280)||(32678591-32678681)
chr8 (190-280)||(35346386-35346476)
chr8 (195-270)||(12108163-12108238)
chr8 (190-277)||(24510780-24510867)
chr8 (190-280)||(36538047-36538137)
chr8 (194-275)||(16643376-16643457)
chr8 (190-280)||(25321668-25321758)
chr8 (190-280)||(33851105-33851195)
chr8 (190-280)||(34899913-34900003)
chr8 (190-272)||(27819647-27819729)
chr8 (192-261)||(25195147-25195216)
chr8 (196-280)||(27740600-27740684)
chr8 (190-261)||(41791561-41791632)
chr8 (192-280)||(2628246-2628334)
chr8 (192-261)||(8673371-8673440)
chr8 (192-261)||(17336732-17336801)
chr8 (206-261)||(17314834-17314889)
chr8 (205-258)||(8709890-8709941)
chr8 (192-270)||(17713213-17713291)
chr8 (190-243)||(16635432-16635485)
chr8 (190-243)||(16635700-16635753)
chr8 (192-261)||(41362408-41362477)
[»] chr5 (30 HSPs)
chr5 (190-277)||(2002217-2002304)
chr5 (190-280)||(42365023-42365113)
chr5 (190-280)||(31690701-31690791)
chr5 (195-280)||(12638882-12638967)
chr5 (193-277)||(8143925-8144009)
chr5 (192-280)||(37066304-37066392)
chr5 (190-280)||(8146094-8146184)
chr5 (190-280)||(8541645-8541735)
chr5 (190-280)||(17825279-17825369)
chr5 (190-280)||(20914847-20914937)
chr5 (192-280)||(16286164-16286252)
chr5 (190-280)||(13146717-13146807)
chr5 (190-280)||(24432481-24432571)
chr5 (200-270)||(24439570-24439640)
chr5 (190-280)||(30086629-30086719)
chr5 (190-280)||(31316882-31316972)
chr5 (191-280)||(35462799-35462888)
chr5 (190-280)||(25962529-25962623)
chr5 (210-277)||(11858330-11858397)
chr5 (192-261)||(8959632-8959701)
chr5 (206-261)||(3463915-3463970)
chr5 (192-231)||(5369161-5369200)
chr5 (192-239)||(28907060-28907107)
chr5 (192-239)||(28943455-28943502)
chr5 (192-234)||(1144624-1144666)
chr5 (192-234)||(8506429-8506471)
chr5 (190-240)||(20452543-20452593)
chr5 (205-242)||(15006413-15006450)
chr5 (205-258)||(42273654-42273705)
chr5 (195-239)||(12912416-12912460)
[»] chr3 (52 HSPs)
chr3 (190-280)||(26641155-26641245)
chr3 (190-280)||(1335097-1335187)
chr3 (190-280)||(49068038-49068128)
chr3 (190-280)||(53020170-53020260)
chr3 (191-280)||(23513555-23513644)
chr3 (192-277)||(51309402-51309487)
chr3 (190-280)||(55400725-55400815)
chr3 (190-280)||(21654232-21654322)
chr3 (190-280)||(31126199-31126289)
chr3 (190-280)||(37324127-37324217)
chr3 (190-280)||(46580523-46580613)
chr3 (190-276)||(52172057-52172143)
chr3 (193-277)||(36189052-36189136)
chr3 (201-277)||(46303542-46303618)
chr3 (190-280)||(46296120-46296210)
chr3 (192-280)||(32322282-32322370)
chr3 (206-280)||(28793165-28793239)
chr3 (207-277)||(34105541-34105611)
chr3 (190-280)||(51255173-51255263)
chr3 (190-280)||(51426606-51426696)
chr3 (190-269)||(13541264-13541343)
chr3 (190-257)||(46820036-46820103)
chr3 (190-280)||(43575944-43576034)
chr3 (190-280)||(45781384-45781474)
chr3 (190-279)||(52252023-52252112)
chr3 (221-280)||(45347756-45347815)
chr3 (190-280)||(16739203-16739288)
chr3 (192-261)||(2994477-2994546)
chr3 (192-261)||(21214231-21214300)
chr3 (192-261)||(22456067-22456136)
chr3 (192-261)||(22479113-22479182)
chr3 (192-272)||(30454772-30454852)
chr3 (206-261)||(25242237-25242292)
chr3 (195-280)||(8097058-8097143)
chr3 (192-258)||(54725665-54725731)
chr3 (205-277)||(35963161-35963233)
chr3 (192-261)||(47444032-47444101)
chr3 (190-233)||(7615008-7615051)
chr3 (207-270)||(26725041-26725104)
chr3 (229-280)||(34022625-34022676)
chr3 (192-270)||(34194878-34194956)
chr3 (205-270)||(20847318-20847383)
chr3 (190-280)||(23209320-23209410)
chr3 (190-240)||(49068549-49068599)
chr3 (207-252)||(3972286-3972331)
chr3 (207-252)||(3997547-3997592)
chr3 (190-239)||(7886698-7886747)
chr3 (192-261)||(10014259-10014328)
chr3 (192-261)||(10114901-10114970)
chr3 (192-261)||(10252001-10252070)
chr3 (205-258)||(50651099-50651152)
chr3 (190-261)||(17587702-17587773)
[»] chr4 (39 HSPs)
chr4 (190-280)||(39970036-39970126)
chr4 (190-280)||(53677526-53677616)
chr4 (192-280)||(29180459-29180547)
chr4 (192-280)||(30776531-30776619)
chr4 (192-280)||(30777472-30777560)
chr4 (190-280)||(1620012-1620102)
chr4 (190-280)||(3043214-3043304)
chr4 (190-280)||(32012374-32012464)
chr4 (190-280)||(43980481-43980571)
chr4 (190-280)||(47807178-47807268)
chr4 (190-280)||(49902010-49902100)
chr4 (190-280)||(52713046-52713136)
chr4 (190-280)||(10591550-10591640)
chr4 (190-276)||(51495132-51495218)
chr4 (190-277)||(5222343-5222430)
chr4 (190-280)||(37788434-37788524)
chr4 (190-280)||(38187773-38187863)
chr4 (190-280)||(50768428-50768518)
chr4 (196-277)||(5234052-5234133)
chr4 (200-270)||(30012011-30012079)
chr4 (190-280)||(9798122-9798212)
chr4 (190-280)||(55937750-55937840)
chr4 (195-266)||(7652111-7652182)
chr4 (190-280)||(29899698-29899788)
chr4 (190-280)||(38940852-38940942)
chr4 (190-280)||(27750395-27750485)
chr4 (192-261)||(5064748-5064817)
chr4 (192-261)||(23978208-23978277)
chr4 (192-261)||(37911874-37911943)
chr4 (190-258)||(17799230-17799298)
chr4 (192-253)||(40411091-40411152)
chr4 (205-277)||(1585424-1585496)
chr4 (195-259)||(32410321-32410385)
chr4 (190-258)||(40553757-40553825)
chr4 (195-239)||(49080250-49080294)
chr4 (190-234)||(53848455-53848499)
chr4 (205-236)||(17236342-17236373)
chr4 (206-271)||(8178322-8178387)
chr4 (192-233)||(46070641-46070682)
[»] chr1 (46 HSPs)
chr1 (190-280)||(44875165-44875255)
chr1 (192-280)||(40220044-40220132)
chr1 (190-280)||(18036530-18036620)
chr1 (190-280)||(25990734-25990824)
chr1 (190-280)||(40960558-40960648)
chr1 (190-280)||(46949307-46949397)
chr1 (190-280)||(15285790-15285879)
chr1 (190-280)||(28017644-28017734)
chr1 (190-280)||(31970393-31970483)
chr1 (190-280)||(40935697-40935787)
chr1 (190-280)||(43656121-43656211)
chr1 (195-280)||(18852214-18852299)
chr1 (192-269)||(26907184-26907261)
chr1 (190-280)||(9128029-9128119)
chr1 (190-280)||(23873911-23874001)
chr1 (190-280)||(28916599-28916689)
chr1 (195-277)||(29488739-29488821)
chr1 (190-280)||(35941827-35941917)
chr1 (200-270)||(36383924-36383994)
chr1 (190-280)||(38942525-38942615)
chr1 (190-280)||(39026330-39026420)
chr1 (191-277)||(44056385-44056471)
chr1 (190-280)||(47996940-47997030)
chr1 (190-280)||(6848390-6848480)
chr1 (191-280)||(15311165-15311253)
chr1 (192-280)||(35189189-35189277)
chr1 (190-280)||(4529173-4529263)
chr1 (190-280)||(26479725-26479815)
chr1 (190-280)||(45357960-45358050)
chr1 (190-280)||(49924405-49924495)
chr1 (192-261)||(25185404-25185473)
chr1 (192-280)||(41063733-41063821)
chr1 (205-280)||(35884212-35884287)
chr1 (194-261)||(44510319-44510386)
chr1 (190-256)||(18913454-18913520)
chr1 (207-277)||(37735467-37735537)
chr1 (192-239)||(5858493-5858540)
chr1 (206-261)||(13351686-13351741)
chr1 (190-253)||(15912188-15912251)
chr1 (195-261)||(45840165-45840231)
chr1 (192-261)||(7397698-7397767)
chr1 (196-240)||(42724090-42724134)
chr1 (192-239)||(16661507-16661554)
chr1 (192-251)||(37192862-37192921)
chr1 (190-239)||(34102095-34102143)
chr1 (194-234)||(50176504-50176544)
[»] chr6 (16 HSPs)
chr6 (195-280)||(12278696-12278782)
chr6 (190-280)||(10227898-10227988)
chr6 (190-280)||(17721890-17721980)
chr6 (190-280)||(33756242-33756332)
chr6 (195-280)||(30766437-30766522)
chr6 (193-280)||(17598282-17598369)
chr6 (190-280)||(30949121-30949211)
chr6 (190-280)||(31887202-31887292)
chr6 (204-280)||(374099-374175)
chr6 (190-280)||(21963944-21964033)
chr6 (190-248)||(32882806-32882864)
chr6 (192-261)||(3888417-3888486)
chr6 (192-261)||(4987933-4988002)
chr6 (206-261)||(16524384-16524438)
chr6 (206-261)||(4031991-4032046)
chr6 (211-270)||(17751835-17751894)
[»] scaffold0495 (1 HSPs)
scaffold0495 (205-280)||(4631-4706)
[»] scaffold0330 (1 HSPs)
scaffold0330 (192-261)||(3160-3229)
[»] scaffold0565 (1 HSPs)
scaffold0565 (191-233)||(6003-6045)


Alignment Details
Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 33152995 - 33153111
Alignment:
Q  161 gaccaacttttatatttatttcnnnnnnntcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatc 260  Q
    ||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33152995 gaccaacttttatatttatttcaaaaaaattatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatc 33153094  T
Q  261 attaaccaataagaatt 277  Q
    |||||||||||||||||    
T  33153095 attaaccaataagaatt 33153111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 190 - 277
Target Start/End: Original strand, 30082338 - 30082425
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||    
T  30082338 tcatcttttccaaagtaaaattaaatgcaaattgcattcaatttattctcttttctattctctccataatcattaaccaataagaatt 30082425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 34808204 - 34808294
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  |||||||||||||||||||    
T  34808204 tcatctttttcaacgtaaaattaaatgcaaattgcattcaatttgttcacctttttattttctccataatttttaaccaataagaattatt 34808294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 48879373 - 48879463
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  48879373 tcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 48879463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 23106438 - 23106528
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  23106438 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 23106528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 35181177 - 35181267
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||| ||||| |||||||||    
T  35181177 tcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattatt 35181267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 43108034 - 43107944
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  43108034 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 43107944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 45598889 - 45598979
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  45598889 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 45598979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 35084230 - 35084143
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  35084230 tcatcctttccaaagtaaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatccaataagaatt 35084143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 22111459 - 22111369
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||  ||||||||| |||||||||    
T  22111459 tcatatttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaattatt 22111369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 28608363 - 28608445
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||||||||||    
T  28608363 ttttccaaagtaaaattaaatgcaaattgcattcaatttgttctcttttctattctctccataataattgaccaataagaatt 28608445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 40583130 - 40583220
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||  ||||||||| |||||||||    
T  40583130 tcatatttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaattatt 40583220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 48938018 - 48937928
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||| |||| |||||||||||||||  |||||||||||||||||||    
T  48938018 tcatcttttccaatgtaaaattaaatacaaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaattatt 48937928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 48943044 - 48942954
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||| |||| |||||||||||||||  |||||||||||||||||||    
T  48943044 tcatcttttccaatgtaaaattaaatacaaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaattatt 48942954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 42617661 - 42617746
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||  ||||||||| |||||||||    
T  42617661 tttttcaatgtaaaattaaatgcaaattgcattcaatttgtgctcctttttattttctccataatttttaaccaattagaattatt 42617746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 33152861 - 33152952
Alignment:
Q  27 tcaagttgctgaacccattgaattgtaaacccatttaattttgtacaattgggatctatcatcg-aatattccatccgtcctaaattataagc 118  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||| || ||||||||||||    
T  33152861 tcaagttgctgaacc-attgaattgtaaacccagttaattttgtacaattgggatctatcatcgaaatactccatccatcataaattataagc 33152952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 3157421 - 3157511
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||||  ||||||||| |||||||||    
T  3157421 tcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttttcctttttattttctccataatttttaaccaatgagaattatt 3157511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 41889156 - 41889246
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||| || |||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  41889156 tcatcttttccaatgtaaaattcaaagcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 41889246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 47383391 - 47383481
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||  ||||||||| |||||||||    
T  47383391 tcatcttttccaatgtaaaattaaatgtaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaattatt 47383481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 39348776 - 39348843
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataat 259  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  39348776 atcttttccaaagtaaaattaaatgcaaattgtattcaatttgttctcctttctattttctcgataat 39348843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 18206448 - 18206358
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||| |||||| ||||||||  ||||||||| |||||||||    
T  18206448 tcatctttttcaatgtaaaattaaatgcaagttgtatttaatttgttctcctttttattttttccataatttttaaccaatgagaattatt 18206358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 19933184 - 19933094
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| | |||||||    
T  19933184 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattatt 19933094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 19964323 - 19964233
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| | |||||||    
T  19964323 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattatt 19964233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 21654246 - 21654160
Alignment:
Q  194 ctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||  ||||||||| |||||||||    
T  21654246 cttttccaatgtaaaattaaatgcaaattacattcaatttgttctccttttcattttctccataatttttaaccaatgagaattatt 21654160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 36576403 - 36576493
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||| | |||||||||||||  ||||||||| | |||||||    
T  36576403 tcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttgttttctccataatttttaaccaatgaaaattatt 36576493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 40560367 - 40560457
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||  ||||||||| |||||||||    
T  40560367 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaattatt 40560457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 41815822 - 41815732
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||| ||| ||||||||||||| || ||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  41815822 tcatattttccaatgtaaaattaaatgtaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 41815732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 7989432 - 7989347
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||  ||||||||| |||||||||    
T  7989432 tttttcaatgtaaaattaaatgcaagttgcattcaatttgttatcctttttattttcttcataatttttaaccaatgagaattatt 7989347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 39337515 - 39337584
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataat 259  Q
    ||||||||| |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39337515 tcatcttttccaaattaaaactaaatgcaaattgcattcaaattgttctcctttctattttctccataat 39337584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 18800903 - 18800828
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaa 265  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||  |||||||||||||||    
T  18800903 tcatctttttcaaagtaaaattaaatgtaaattgcattcaatttgctcttatttctattccctccataatcattaa 18800828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 29236196 - 29236110
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    ||||||||| | ||||||||||||||  |||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||    
T  29236196 tcatcttttacgaagtaaaattaaatataaattgcattcaattt-ttctcctttttattctctccataatcattaaccaataaaaatt 29236110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 23731545 - 23731635
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  |||| |||  |||||||||    
T  23731545 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaatcaacgagaattatt 23731635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 41890371 - 41890281
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||  ||||  ||| |||||||||    
T  41890371 tcatcttttttaatgtaaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaattaatgagaattatt 41890281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 32491236 - 32491146
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||  || |||||||||||||||| ||||||| ||||||||||||||| | |||||||||||||  ||||||||| | |||||||    
T  32491236 tcatcttttcgaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttgttttctccataatttttaaccaatgaaaattatt 32491146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 44600431 - 44600521
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||  |||||||||||||||| ||||||||||||||||||| ||| | |||||||||||||  ||||||||| | |||||||    
T  44600431 tcatcttttccagtgtaaaattaaatgcaagttgcattcaatttgttctcttttttgttttctccataatttttaaccaatgaaaattatt 44600521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 48339389 - 48339303
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatta 278  Q
    ||||||| |||| |||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||| | ||  ||||||||||    
T  48339389 atcttttccaaactaaaattaaatgcaaactgcatttaatttattcttctttctattttctccataatcaatcacagataagaatta 48339303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 28843645 - 28843558
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    ||||||||| |||| |||||||||||  ||||| |||| |||||  ||| ||||||||| |||||||||||||||| |||||||||||    
T  28843645 tcatcttttccaaaataaaattaaatataaattacatttaattttatctactttctattctctccataatcattaatcaataagaatt 28843558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 31769130 - 31769061
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||| |||| ||| ||||||||| |||||||    
T  31769130 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctcatttttattttctctataatca 31769061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 35888137 - 35888068
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||| ||||||||| ||||||||||||| |||| ||| ||||||||| |||||||    
T  35888137 atcttttccaaaggaaaataaaatgcaaagtgcattcaatttgctctcttttttattttctctataatca 35888068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 40593822 - 40593890
Alignment:
Q  209 attaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||||||| |||||||||| ||||| |||| |||| |||| | ||| ||||||||||||||||||||||    
T  40593822 attaaatgtaaattgcatttaatttattctactttttattctatccgtaatcattaaccaataagaatt 40593890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 9818493 - 9818543
Alignment:
Q  230 atttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  9818493 atttgttctcctttttattttctccataatttttaaccaatgagaattatt 9818543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 10720418 - 10720468
Alignment:
Q  230 atttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  10720418 atttgttctcctttttattttctccataatttttaaccaatgagaattatt 10720468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 6882390 - 6882439
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc 239  Q
    |||| |||||||||| ||||||||||| |||||||||| |||||||||||    
T  6882390 tcatatttttcaaagaaaaattaaatgaaaattgcatttaatttgttctc 6882439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 28941320 - 28941277
Alignment:
Q  191 catctttttcaaagtaaaattaaatgcaaattgcattcaatttg 234  Q
    |||||||| |||||| ||||||||||||||||||||| ||||||    
T  28941320 catcttttccaaagtgaaattaaatgcaaattgcattaaatttg 28941277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 38260308 - 38260396
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||| ||||  ||||||||||||||| |||||| |||||| |||| ||||| |||||||| ||||| | |||||||| | |||||||    
T  38260308 atcttttccaaatgaaaattaaatgcaaagtgcatttaatttgctctctctttc-attttctcaataataaataaccaatgaaaattatt 38260396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 4910788 - 4910713
Alignment:
Q  205 taaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||||||||||| ||||||||||  |||| ||||| ||||| |||||||||| || ||||| | |||||||    
T  4910788 taaaattaaatgcaaattacattcaattttatctctctttc-attttttccataatcaatagccaatgaaaattatt 4910713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 37767187 - 37767139
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcc 240  Q
    ||||||| |||| | ||||||| ||||||||||||| ||||||||||||    
T  37767187 atcttttccaaaatgaaattaagtgcaaattgcatttaatttgttctcc 37767139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 190 - 277
Target Start/End: Original strand, 15068721 - 15068808
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15068721 tcatcttttccaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattctctccataatcattaaccaataagaatt 15068808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 13822938 - 13822854
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaat 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  13822938 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcatttctattctctccataatcattaaccaataagaat 13822854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 190 - 277
Target Start/End: Original strand, 9294641 - 9294728
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||    
T  9294641 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttcttctctctattctctccataatcattaaccaataagaatt 9294728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 5091710 - 5091620
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  5091710 tcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 5091620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 792526 - 792436
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  792526 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 792436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 8784381 - 8784471
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||| ||||||||||||||    
T  8784381 tcatctttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaatcaataagaattatt 8784471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 14565543 - 14565453
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  14565543 tcatcttttccaatgtaaaattaaatgcaaattgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 14565453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 191 - 280
Target Start/End: Complemental strand, 4033844 - 4033755
Alignment:
Q  191 catctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||  ||||||||  |||||||||    
T  4033844 catctttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaacgagaattatt 4033755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 18834069 - 18834000
Alignment:
Q  201 aaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaat 270  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  18834069 aaagtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataataattaaccaat 18834000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 21539743 - 21539833
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||| ||||| |||||||||    
T  21539743 tcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattatt 21539833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 44803884 - 44803974
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||  ||||||||| |||||||||    
T  44803884 tcatcttttccaatgtaaaattaaatacaaattgcattcaatttgttctcctatttattttctccataatttttaaccaatgagaattatt 44803974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 10478166 - 10478254
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||| ||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  10478166 atcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 10478254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 4091997 - 4092087
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||  ||||||| | |||||||||    
T  4091997 tcatctttttcaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttgttttttccataatttttaaccattgagaattatt 4092087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 29514189 - 29514099
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||  ||||||||| | |||||||    
T  29514189 tcatcttttttaatgtaaaattaaatgcaaattgcattcaatttgttctcatttttattttctctataatttttaaccaatgaaaattatt 29514099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 33635322 - 33635412
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||  || |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  33635322 tcatcttttctaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 33635412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 38549813 - 38549723
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||| | |||||||||||||  ||||||||| |||||||||    
T  38549813 tcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattatt 38549723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 43075736 - 43075826
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||| || ||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||||| | |||||||    
T  43075736 tcatctattccaatgtaaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataatttttaaccaatgaaaattatt 43075826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 43451491 - 43451581
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||  ||||||||| | |||||||    
T  43451491 tcatctttttcaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgaaaattatt 43451581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 28424260 - 28424329
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataat 259  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  28424260 tcatcttttccaatgtaaaattaaatgcaaattgtattcaatttgttctcctttttattttctccataat 28424329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 28492506 - 28492596
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||| ||| ||||||||||||||||||||||||||| || ||||||||| ||||||||| |||||  ||||||||| |||||||||    
T  28492506 tcattttttccaatgtaaaattaaatgcaaattgcattcaacttattctcctttttattttctctataatttttaaccaatgagaattatt 28492596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 29514645 - 29514555
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||  ||| ||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||  ||||||||| | |||||||    
T  29514645 tcatctttcccaatgtaaaattaaatgtaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgaaaattatt 29514555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 35832398 - 35832488
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| |||  ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||  ||||| ||| |||||||||    
T  35832398 tcatcttttccaatataaaattaaatgcaaattgcattcaatctgttcacctttttattttctccataatttttaactaatgagaattatt 35832488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 12872110 - 12872186
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaac 266  Q
    |||||||||||||||||||||||||| |||||| |||| ||||| |||||||||||||| | || ||||||||||||    
T  12872110 tcatctttttcaaagtaaaattaaatacaaatttcatttaatttattctcctttctattctatctataatcattaac 12872186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 22162308 - 22162368
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttct 252  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  22162308 atcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttct 22162368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 20380115 - 20380184
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||| |||| |||  |||||||| |||||||    
T  20380115 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctcgttttcattttctctataatca 20380184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 26998309 - 26998378
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||| |||| |||  |||||||| |||||||    
T  26998309 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatca 26998378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 32010094 - 32010163
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| |||| |||  |||||||| |||||||    
T  32010094 atctttttcaaaggaaaattaaatgcaaagtgcatttaatttgctctctttttcattttctctataatca 32010163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 8032837 - 8032790
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc 239  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  8032837 atctttttcaaagaaaaattaaatgcaaaatgcattcaatttgctctc 8032790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 15858780 - 15858740
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaa 230  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  15858780 tcatcttttccaatgtaaaattaaatgcaaattgcattcaa 15858740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 266
Target Start/End: Original strand, 9709514 - 9709579
Alignment:
Q  200 caaagtaaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaac 266  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||    
T  9709514 caaagaaaaattaa-tgcaaattgcattcaatttgttctctctttc-attttctcaataatcaataac 9709579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 32273666 - 32273732
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    |||| ||||| ||||||||||| ||| ||||||||||||| |||| |||  |||||||| |||||||    
T  32273666 ttttccaaaggaaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatca 32273732  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 38070988 - 38071056
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||| ||| ||||||||||||| |||  |||| |||||||| |||||||    
T  38070988 atcttttccaaaggaaaattaaatgtaaagtgcattcaatttgctctattttc-attttctctataatca 38071056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 44442123 - 44442192
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    |||||||  |||| ||||||||||||||| ||||||||||||| | || |||  |||||||| |||||||    
T  44442123 atcttttctaaaggaaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatca 44442192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 10979197 - 10979245
Alignment:
Q  232 ttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||||| |||||||||||||||  ||||| ||| |||||||||    
T  10979197 ttgttctcctttttattttctccataatttttaactaatgagaattatt 10979245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 190 - 277
Target Start/End: Original strand, 41426328 - 41426415
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  41426328 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttatcctttctattatctccataatcattaaccaataataatt 41426415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 3099942 - 3100032
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  3099942 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 3100032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 24612652 - 24612562
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  24612652 tcatctttttcaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 24612562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 27621119 - 27621209
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  27621119 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 27621209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 34713517 - 34713607
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  34713517 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 34713607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 44052610 - 44052700
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  44052610 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 44052700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 44411381 - 44411291
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  44411381 tcatctttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatt 44411291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 31133201 - 31133111
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||  ||||||||| |||||||||    
T  31133201 tcatcttttccaatgtaaaattaaatgcaaattgcattcaattttttctcctttttattttctccataatttttaaccaatgagaattatt 31133111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 35260046 - 35260136
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  35260046 tcatcttttccaatgtaaaattaaatgcaaattccattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 35260136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 37598059 - 37598149
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  37598059 tcattttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 37598149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 2238765 - 2238678
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||| || |||||||||||| ||||    
T  2238765 tcatcttttccaaagtaaaattaaatgcaaatcgcattcaatttgttctcctttctattcactccatgattattaaccaataataatt 2238678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 11992717 - 11992807
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| | |||||||||||||  ||||||||| |||||||||    
T  11992717 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttcacctttttcttttctccataatttttaaccaatgagaattatt 11992807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 27752575 - 27752665
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  27752575 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 27752665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 37567603 - 37567513
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  |||| |||| |||||||||    
T  37567603 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataatttttaatcaatgagaattatt 37567513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 39187222 - 39187312
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||| ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| | |||||||    
T  39187222 tcatcatttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatt 39187312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 44358663 - 44358573
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||  ||| |||||||||    
T  44358663 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaattaatgagaattatt 44358573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 35344361 - 35344446
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||| |||||||||||||||  ||||||||| |||||||||    
T  35344361 tttttcaatgtaaaattaaatgcaaattgcattcaatgtattctcctttttattttctccataatttttaaccaatgagaattatt 35344446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 11044046 - 11044136
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||| ||| |||||||||||||||| ||||||||||||||||||||||| | |||||||||||||  ||||||||| |||||||||    
T  11044046 tcatattttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttgttttctccataatttttaaccaatgagaattatt 11044136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 32678681 - 32678591
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||  ||||||||| |||||||||    
T  32678681 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcttctttttattttctccataatttttaaccaatgagaattatt 32678591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 35346476 - 35346386
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||| ||||||||||||||||||| | ||||||||| |||| ||||||||||  ||||||||| |||||||||    
T  35346476 tcatctttttcaatgtaaaattgaatgcaaattgcattcaatgtattctcctttttattatctccataatttttaaccaatgagaattatt 35346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 12108163 - 12108238
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaat 270  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||  |||||||||    
T  12108163 tttttcaatgtaaaattcaatgcaaattgcattcaatttgttttcctttttattttctccataatttttaaccaat 12108238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 24510867 - 24510780
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||| |||| |||||||  |||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||| ||||    
T  24510867 tcattttttccaaagtagtattaaatgcaaattgcattcaatttgttctactttttattctatccataatcattaaccaataaaaatt 24510780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 36538047 - 36538137
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||| ||||||||| |||||||||||| ||  ||||||||| |||||||||    
T  36538047 tcatcttttccaatgtaaaattaaatgcaatttgcatttaatttattctcctttttattttctccatgatttttaaccaatgagaattatt 36538137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 16643376 - 16643457
Alignment:
Q  194 ctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaa 275  Q
    |||||| |||||||||||||||||||||| ||||||| || || |||||| ||||||||||||||||||| |||||| ||||    
T  16643376 ctttttaaaagtaaaattaaatgcaaattacattcaagttattttcctttttattttctccataatcattgaccaatgagaa 16643457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 25321758 - 25321668
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| |||||| |||||||| |||||||||||||||  |||||| || | |||||||    
T  25321758 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgctctcctttttattttctccataatttttaacctatgaaaattatt 25321668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 33851195 - 33851105
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| |||||||| |||||| |||||||||||| ||  ||||| ||| |||||||||    
T  33851195 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttttcctttttattttctccatgatttttaactaatgagaattatt 33851105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 34899913 - 34900003
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||  ||||||||||||||||| |||| ||||||||||||| | |||| || ||||||||| |||| |||||||| | |||||||    
T  34899913 tcatcttttctaaagtaaaattaaatgctaatttcattcaatttgtttttctttatactttctccatgatcaataaccaatcaaaattatt 34900003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 27819647 - 27819729
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataa 272  Q
    ||||||||||||||| ||||||||||||||| | |||| |||||| ||||| || ||||||||| |||| || ||| ||||||    
T  27819647 tcatctttttcaaaggaaaattaaatgcaaactacatttaatttgctctcccttttattttctctataaccaataatcaataa 27819729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 25195216 - 25195147
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||| |||| |||  |||||||| |||||||    
T  25195216 atcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatca 25195147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 280
Target Start/End: Original strand, 27740600 - 27740684
Alignment:
Q  196 ttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||| |||| |||||||||| ||||| ||||| ||||| ||| ||||||||||||| ||| |||| || ||||| |||||||||    
T  27740600 ttttccaagtcaaattaaatgtaaatttcattcgatttgctcttctttctattttcttcatgatcaatagccaattagaattatt 27740684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 41791632 - 41791561
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||||| ||||  ||||||||||| ||| ||||||||||||| |||| ||| ||||||||| |||||||    
T  41791632 tcatcttttccaaaagaaaattaaatgtaaaatgcattcaatttgctctcttttttattttctctataatca 41791561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 2628334 - 2628246
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||| |||||||| || |||||||||| |||| ||||| |||||||| |||| || |||||||| | |||||||    
T  2628334 atctttttcaaaggaaaatttaatgcaaagtgaattcaatttgctctctctttc-attttctcaataagcaataaccaatgaaaattatt 2628246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 8673371 - 8673440
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| | ||||||||||| |||| |||  |||||||| |||||||    
T  8673371 atcttttccaaaggaaaattaaatgcaaagtacattcaatttgctctctttttcattttctctataatca 8673440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 17336732 - 17336801
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    |||||||  |||| ||||||||||||||| ||||||||||||| ||||||||  |||| ||| |||||||    
T  17336732 atcttttctaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataatca 17336801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 17314834 - 17314889
Alignment:
Q  206 aaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    |||||||||| |||| ||||||||||||| ||||||||  |||||||| |||||||    
T  17314834 aaaattaaatccaaagtgcattcaatttgctctccttttcattttctctataatca 17314889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 8709941 - 8709890
Alignment:
Q  205 taaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataa 258  Q
    |||||||||||||||||| |||||||||  |||||  |||||||||||||||||    
T  8709941 taaaattaaatgcaaattacattcaatt--ttctctcttctattttctccataa 8709890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 17713213 - 17713291
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaat 270  Q
    ||||||| ||||| ||||||||||||||| |||||||||| || ||||  ||| ||||| || |||| || ||||||||    
T  17713213 atcttttccaaaggaaaattaaatgcaaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaat 17713291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 16635432 - 16635485
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctccttt 243  Q
    |||||||||  ||||||||||| ||| |||||||||||||| ||||| ||||||    
T  16635432 tcatcttttcaaaagtaaaatttaattcaaattgcattcaagttgttttccttt 16635485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 16635700 - 16635753
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctccttt 243  Q
    |||||||||  ||||||||||| ||| |||||||||||||| ||||| ||||||    
T  16635700 tcatcttttcaaaagtaaaatttaattcaaattgcattcaagttgttttccttt 16635753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 41362477 - 41362408
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| |||||| |||||| || | |||  |||||||| |||||||    
T  41362477 atcttttccaaaggaaaattaaatgcaaagtgcatttaatttgctcactttttcattttctctataatca 41362408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 2002304 - 2002217
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2002304 tcatcttttccaaaataaaattaaatgcaaattgcattcaatttgttctcctttctattctctccataatcattaaccaataagaatt 2002217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 42365023 - 42365113
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  42365023 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 42365113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 31690791 - 31690701
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| | |||||||    
T  31690791 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatt 31690701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 12638882 - 12638967
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||  ||||||||| |||||||||    
T  12638882 tttttcaatgtaaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattatt 12638967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 8143925 - 8144009
Alignment:
Q  193 tctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||    
T  8143925 tctttttcaaagtaaaattaaatataaattgcattcaatttgttctacattttattttctccataatcattaaccaatgagaatt 8144009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 37066392 - 37066304
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||||| |||||||||    
T  37066392 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatt 37066304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 8146184 - 8146094
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||| ||| |||||||||    
T  8146184 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcttttttattttctccataatttttaactaatgagaattatt 8146094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 8541735 - 8541645
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| || |||||||||||||||  ||||||||| |||||||||    
T  8541735 tcatcttttccaatgtaaaattaaatgcaaattgcattaaatttgttctccattttattttctccataatttttaaccaatgagaattatt 8541645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 17825369 - 17825279
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||  ||||||||| |||||||||    
T  17825369 tcatatttttcaatgtaaaattaaatgcaaattacattcaatttgtcctcctttttattttctccataatttttaaccaatgagaattatt 17825279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 20914847 - 20914937
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  20914847 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 20914937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 16286252 - 16286164
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||| |||||||||||||||| ||||||| | ||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  16286252 atctttttcaatgtaaaattaaatgcaagttgcatttagtttgttctcctttttattttctccataatttttaaccaatgagaattatt 16286164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 13146717 - 13146807
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||  ||||||||| |||||||||    
T  13146717 tcatcttttccaatgtaaaattaaatgtaaattgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattatt 13146807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 24432571 - 24432481
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| |||||||| |||||| |||||||||||||||  ||||||||| |||||||||    
T  24432571 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttatcctttttattttctccataatttttaaccaatgagaattatt 24432481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 24439570 - 24439640
Alignment:
Q  200 caaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaat 270  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||    
T  24439570 caaagtaaaattaaatgcaaattgcattcaatttgttctcctttttattttttccataataattagccaat 24439640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 30086719 - 30086629
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||  ||| ||||| |||||||||    
T  30086719 tcatcttttccaatgtaaaattaaatacaaattgcattcaatttattctcctttttattttctccataatttttagccaatgagaattatt 30086629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 31316972 - 31316882
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||| ||||||| ||| ||||| ||||| |||||||||||||||  ||||||||| |||||||||    
T  31316972 tcatctttttcaatgtaaaattaaatgcaagttgcatttaatctgttcacctttttattttctccataatttttaaccaatgagaattatt 31316882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 280
Target Start/End: Complemental strand, 35462888 - 35462799
Alignment:
Q  191 catctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||||| ||||||||||||||||||| |||||||||| || |||||| |||||||| ||||||  ||||||||| |||||||||    
T  35462888 catctttttcaatgtaaaattaaatgcaaatttcattcaatttattatcctttttattttcttcataatttttaaccaatgagaattatt 35462799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 25962623 - 25962529
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaat----tgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||| |    |||||| |||||||||| |||| |||||||||||||||  ||||||||| |||||||||    
T  25962623 tcatctttttcaatgtaaaattaaatgcaagtcatttgcatttaatttgttctactttttattttctccataatttttaaccaatgagaattatt 25962529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 11858330 - 11858397
Alignment:
Q  210 ttaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||||| |||||| | |||||||| ||||| |||| |||||||||||||||| |||||||||| ||||    
T  11858330 ttaaatacaaattacgttcaattttttctcttttccattttctccataatcaataaccaataaaaatt 11858397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 8959632 - 8959701
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||| ||| ||| ||||||||| |||| |||| |||||||| |||||||    
T  8959632 atcttttccaaagaaaaattaaatgtaaagtgcgttcaatttgctctcttttccattttctctataatca 8959701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 3463970 - 3463915
Alignment:
Q  206 aaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||||||||||| ||||||||||||| |||| |||  |||||||| |||||||    
T  3463970 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatca 3463915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 231
Target Start/End: Complemental strand, 5369200 - 5369161
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaat 231  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  5369200 atctttttcaaaggaaaattaaatgcaaagtgcattcaat 5369161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 28907060 - 28907107
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc 239  Q
    |||||||||||   ||||||||||||||| ||||||||||||||||||    
T  28907060 atctttttcaatagaaaattaaatgcaaagtgcattcaatttgttctc 28907107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 28943455 - 28943502
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc 239  Q
    |||||||||||   ||||||||||||||| ||||||||||||||||||    
T  28943455 atctttttcaatagaaaattaaatgcaaagtgcattcaatttgttctc 28943502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 1144666 - 1144624
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttg 234  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||    
T  1144666 atcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 1144624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 8506429 - 8506471
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttg 234  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||    
T  8506429 atcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 8506471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 20452593 - 20452543
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcc 240  Q
    |||||| |||||  ||||||||||||| |||||| ||||||||||||||||    
T  20452593 tcatctctttcattgtaaaattaaatgtaaattgtattcaatttgttctcc 20452543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 15006450 - 15006413
Alignment:
Q  205 taaaattaaatgcaaattgcattcaatttgttctcctt 242  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  15006450 taaaattaaatacaaattgcattcaatttgttatcctt 15006413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 42273654 - 42273705
Alignment:
Q  205 taaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataa 258  Q
    |||||||||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  42273654 taaaattaaatgcaaattgcattcaattttctct-ctttc-attttctccataa 42273705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 12912460 - 12912416
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc 239  Q
    |||||||||| ||||||||||||||| |||||| |||||| ||||    
T  12912460 tttttcaaagaaaaattaaatgcaaagtgcatttaatttgctctc 12912416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 26641245 - 26641155
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  26641245 tcatctttttcaaggtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 26641155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 1335097 - 1335187
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||  ||||||||||| |||||||    
T  1335097 tcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaataaaaattatt 1335187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 49068038 - 49068128
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  49068038 tcatctttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatt 49068128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 53020170 - 53020260
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||| ||| |||||||||    
T  53020170 tcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaactaatgagaattatt 53020260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 191 - 280
Target Start/End: Original strand, 23513555 - 23513644
Alignment:
Q  191 catctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||| ||||| |||||||||    
T  23513555 catctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattatt 23513644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 192 - 277
Target Start/End: Original strand, 51309402 - 51309487
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  51309402 atcttttctaaattaaaattaaatgcaaattgcattcaatttgttcccctttctattctctccataatcattaaccaataagaatt 51309487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 55400725 - 55400815
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  ||||||||| |||||||||    
T  55400725 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttcacctttttattttctccataatttttaaccaatgagaattatt 55400815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 21654232 - 21654322
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||| ||| | |||||||    
T  21654232 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaacaaatgaaaattatt 21654322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 31126199 - 31126289
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| | |||||||    
T  31126199 tcattttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatt 31126289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 37324217 - 37324127
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||  ||||| |||||||||||||||  ||||||||| |||||||||    
T  37324217 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgtttccctttttattttctccataatttttaaccaatgagaattatt 37324127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 46580523 - 46580613
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||| |||| |||||||||    
T  46580523 tcatattttacaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaatcaatgagaattatt 46580613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 52172143 - 52172057
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaat 276  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||||    
T  52172143 tcatctttttcaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 52172057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 36189136 - 36189052
Alignment:
Q  193 tctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| | || |||||||||||||| ||||||    
T  36189136 tcttttccaaagtaaaattaaatgcaaattgcattcaatttgttcacctttttattttattcacaatcattaaccaatgagaatt 36189052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 277
Target Start/End: Original strand, 46303542 - 46303618
Alignment:
Q  201 aaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||| |||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||||||||||    
T  46303542 aaagaaaaattaaatgcaaattgcatttaatttgttattcttcctattttctccataatcattaaccaataagaatt 46303618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 46296210 - 46296120
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| | | |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  46296210 tcatcttttccgatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 46296120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 32322370 - 32322282
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||| |||||||||||| ||| ||||||| ||||| ||||||||| |||||||||||||||  ||||||||| |||||||||    
T  32322370 atctttttcaatgtaaaattaaatacaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaattatt 32322282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 28793165 - 28793239
Alignment:
Q  206 aaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  28793165 aaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 28793239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 34105541 - 34105611
Alignment:
Q  207 aaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||||||||| |||||||||| |||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  34105541 aaattaaatgtaaattgcattgaatttgttctgctttctattctcttcataatcattaaccaataagaatt 34105611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 51255173 - 51255263
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| |||  ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||| ||| |||||||||    
T  51255173 tcatcttttccaatctaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaactaatgagaattatt 51255263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 51426606 - 51426696
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||  || ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||  ||||||||| | |||||||    
T  51426606 tcatcttttctaatgtaaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatt 51426696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 13541264 - 13541343
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaa 269  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |||| |||||| ||||||||| |||||  ||||||||    
T  13541264 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttttcctttttattttctctataatttttaaccaa 13541343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 46820036 - 46820103
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccata 257  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  46820036 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccata 46820103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 43575944 - 43576034
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||  || |||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||  ||||||||| | |||||||    
T  43575944 tcatcttttctaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgataattatt 43576034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 45781384 - 45781474
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||| ||| ||||||| ||||||||||| ||| ||| |||||||||||  ||||||||| |||||||||    
T  45781384 tcatcttttccaatgtaaaattaaattcaagttgcatttaatttgttctcatttttatcttctccataatttttaaccaatgagaattatt 45781474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 52252023 - 52252112
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattat 279  Q
    ||||||||| ||| |||||||||||||||| || |||| ||||||||||| ||| |||||||||||||||  |||| |||| ||||||||    
T  52252023 tcatcttttccaatgtaaaattaaatgcaagttacatttaatttgttctcttttttattttctccataatttttaatcaatgagaattat 52252112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 45347815 - 45347756
Alignment:
Q  221 ttgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  45347815 ttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 45347756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 16739288 - 16739203
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| ||||||||||||     ||||||| |||||||| |||||| |||||||||||||||  ||||||||| |||||||||    
T  16739288 tcatcttttccaatgtaaaattaaat-----ttgcatttaatttgttttcctttttattttctccataatttttaaccaatgagaattatt 16739203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 2994546 - 2994477
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||| |||| |||  |||||||| |||||||    
T  2994546 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatca 2994477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 21214231 - 21214300
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||  ||||||||||||||| ||||||||||||| |||| ||| ||||||||| |||||||    
T  21214231 atcttttccaaatgaaaattaaatgcaaagtgcattcaatttgctctcttttttattttctcaataatca 21214300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 22456136 - 22456067
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||| |||| |||  |||||||| |||||||    
T  22456136 atcttttccaaaggaaaattaaatgcaaaatgcattcaatttgctctctttttcattttctctataatca 22456067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 22479182 - 22479113
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||| |||| |||  |||||||| |||||||    
T  22479182 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatca 22479113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 272
Target Start/End: Complemental strand, 30454852 - 30454772
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaataa 272  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||| |||| ||||| |||||||| |||| || ||||||||||    
T  30454852 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctctttc-attttctcaataaccaataaccaataa 30454772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 25242292 - 25242237
Alignment:
Q  206 aaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||||| ||||| |||||||||||||||||| ||| ||||||||| |||||||    
T  25242292 aaaattaaacgcaaagtgcattcaatttgttctcttttttattttctctataatca 25242237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 8097143 - 8097058
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| ||||| ||||||||||||||| ||||||||||||| |||| ||||| |||||||| |||| || |||||||| | |||||||    
T  8097143 ttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctctttc-attttctcaataagcaataaccaatgaaaattatt 8097058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 54725731 - 54725665
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataa 258  Q
    ||||||||||||  |||||||||| |||| ||||||||||||| |||| ||| ||||||||| ||||    
T  54725731 atctttttcaaaagaaaattaaatacaaagtgcattcaatttgctctcttttttattttctcaataa 54725665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 35963161 - 35963233
Alignment:
Q  205 taaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaataagaatt 277  Q
    ||||||||||||||||||||||| |||||  |||| ||||| ||||||||||||| || |||||||||| ||||    
T  35963161 taaaattaaatgcaaattgcatttaattttctctctctttc-attttctccataaccaataaccaataaaaatt 35963233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 47444101 - 47444032
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||| | || |||  |||||||| |||||||    
T  47444101 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatca 47444032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 7615051 - 7615008
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaattt 233  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||    
T  7615051 tcatctttttcaaaggaaaactaaatgcaacttgcattcaattt 7615008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 26725104 - 26725041
Alignment:
Q  207 aaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaat 270  Q
    |||||| ||||||||| |||||| |||  ||||  |||||||||||||||||||| ||||||||    
T  26725104 aaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaat 26725041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 34022625 - 34022676
Alignment:
Q  229 aatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||||| ||||||||| |||||  ||||||||| |||||||||    
T  34022625 aatttgttctcctttttattttctctataatttttaaccaatgagaattatt 34022676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 34194878 - 34194956
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaat 270  Q
    ||||||| ||||| ||||||||||||||| |||||||| |||| |||| ||||| |||||||| |||| || ||||||||    
T  34194878 atcttttccaaaggaaaattaaatgcaaagtgcattcagtttgctctctctttc-attttctcaataaccaataaccaat 34194956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 20847383 - 20847318
Alignment:
Q  205 taaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaat 270  Q
    |||||||||||||||||| |||||||||| | ||| ||||| |||||||||||||||| | ||||||    
T  20847383 taaaattaaatgcaaattacattcaatttttcctctctttc-attttctccataatcaattaccaat 20847318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 23209410 - 23209320
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||  |||||  ||||||||||||||||||||||| | |||||||| ||  ||||||||  |||  | |||||||||| |||||||    
T  23209410 tcatctttcccaaagagaaattaaatgcaaattgcattcattatgttctccctttcattttctctctaactaataaccaataaaaattatt 23209320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 49068549 - 49068599
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcc 240  Q
    |||||||||| ||||| ||| |||||||||||||| || ||||||||||||    
T  49068549 tcatcttttttaaagtgaaactaaatgcaaattgcttttaatttgttctcc 49068599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 3972286 - 3972331
Alignment:
Q  207 aaattaaatgcaaattgcattcaatttgttctcctttctattttct 252  Q
    |||||||||||||||| ||||||||||||||||  ||| |||||||    
T  3972286 aaattaaatgcaaattacattcaatttgttctctcttccattttct 3972331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 3997592 - 3997547
Alignment:
Q  207 aaattaaatgcaaattgcattcaatttgttctcctttctattttct 252  Q
    |||||||||||||||| ||||||||||||||||  ||| |||||||    
T  3997592 aaattaaatgcaaattacattcaatttgttctctcttccattttct 3997547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 7886747 - 7886698
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc 239  Q
    ||||||||| ||||| ||||| ||||||||| ||||||||||||| ||||    
T  7886747 tcatcttttccaaagaaaaatcaaatgcaaagtgcattcaatttgctctc 7886698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 10014259 - 10014328
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||| ||||| ||||||||||||  |||  ||| ||||||||| |||||||    
T  10014259 atcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctattttttattttctctataatca 10014328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 10114901 - 10114970
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||| ||||| ||||||||||||| |||  |||  |||||||| |||||||    
T  10114901 atcttttccaaaggaaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatca 10114970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 10252001 - 10252070
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||| ||||| ||||||||||||| |||  |||  |||||||| |||||||    
T  10252001 atcttttccaaaggaaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatca 10252070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 50651152 - 50651099
Alignment:
Q  205 taaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataa 258  Q
    |||||||||||||||||| ||||||||||  ||||  || ||||||||||||||    
T  50651152 taaaattaaatgcaaattacattcaattttctctctcttttattttctccataa 50651099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 17587702 - 17587773
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatca 261  Q
    |||||||||| |||| |||||||| || ||| |||||| ||||||||||| ||||| |||||||| |||||||    
T  17587702 tcatcttttttaaagaaaaattaagtgtaaagtgcatttaatttgttctctctttc-attttctcaataatca 17587773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 8e-30; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 39970126 - 39970036
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  39970126 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 39970036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 53677616 - 53677526
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  53677616 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 53677526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 29180547 - 29180459
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  29180547 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 29180459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 30776619 - 30776531
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  30776619 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 30776531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 30777472 - 30777560
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  30777472 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 30777560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 1620012 - 1620102
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||| |||| |||||||||||||||  ||||||||| |||||||||    
T  1620012 tcatctttttcaatgtaaaattaaatgcaatttgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattatt 1620102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 3043304 - 3043214
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  3043304 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatt 3043214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 32012464 - 32012374
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||  ||||||||| |||||||||    
T  32012464 tcatctttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctctataatttttaaccaatgagaattatt 32012374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 43980481 - 43980571
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  43980481 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatt 43980571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 47807178 - 47807268
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||  |||||||||    
T  47807178 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaacgagaattatt 47807268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 49902010 - 49902100
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  49902010 tcatcttttccaatataaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 49902100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 52713046 - 52713136
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  | |||||||||||||||||    
T  52713046 tcatcttttccaatgtaaaattaaatgcaaattgcatttaatttgttctcctttttattttctccataattttcaaccaataagaattatt 52713136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 10591640 - 10591550
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||  ||||||||| |||||||||    
T  10591640 tcatcttttccaatgtaaaattaaatgcaaattgcattcaattggttctcctttttattttttccataatttttaaccaatgagaattatt 10591550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 51495132 - 51495218
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaat 276  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||  ||||||||| |||||    
T  51495132 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaat 51495218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 5222430 - 5222343
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||  | |||||||||| ||||||||||||    
T  5222430 tcattttttccaaagtaaaattaaatgcaaattgcattgaatttgttctcctttttatttttcctataatcattatccaataagaatt 5222343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 37788434 - 37788524
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||  ||||||||| |||||||||    
T  37788434 tcatcttttccaatgtaaaattaaatgcaacttgcatttaatttgttctcttttttattttctccataatttttaaccaatgagaattatt 37788524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 38187863 - 38187773
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||  ||||| ||| |||||||||    
T  38187863 tcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcttttttattttctccataatttttaacaaatgagaattatt 38187773  T

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Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 50768428 - 50768518
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| | |||||||    
T  50768428 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattatt 50768518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 5234133 - 5234052
Alignment:
Q  196 ttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||| ||| |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||    
T  5234133 tttttaaaataaaattaaatgtaaattgcattcaatttattctcctttttattttctccataataattaaccaataataatt 5234052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 30012079 - 30012011
Alignment:
Q  200 caaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaat 270  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||||||||||    
T  30012079 caaagtaaaattaaatgcaaattgcattcaatttgttct--tttttattttctccataataattaaccaat 30012011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 9798212 - 9798122
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||   ||| |||| |||||||||    
T  9798212 tcatcttttccaatgtaaaattaaatgcaaattggattcaatgtgttctcctttttattttctccataatttgtaatcaatgagaattatt 9798122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 55937840 - 55937750
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||| ||| ||||||||||||||| ||| |||||||||||  ||||||||| |||||||||    
T  55937840 tcatcttttccaatgtaaaattaaatgcaagttgtatttaatttgttctcctttttatcttctccataatttttaaccaatgagaattatt 55937750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 7652182 - 7652111
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaac 266  Q
    |||||||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||| |||| ||||    
T  7652182 tttttcaaagtaaaattaaatgaaaatttcactcaatttgttctccattctattttctccatgatcaataac 7652111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 29899698 - 29899788
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||| ||||| |||||||| ||| ||  ||||||||| |||||||||    
T  29899698 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcacctttttattttcttcatgatttttaaccaatgagaattatt 29899788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 38940852 - 38940942
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||| |||| |||||| |||| |||  |||| |||| |||||||||    
T  38940852 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttattcttctttttattttttccaaaatttttaatcaatgagaattatt 38940942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 27750485 - 27750395
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| |||||||||| |||| |||||| ||||||||  ||||| | ||| |||||||    
T  27750485 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcttctttttattttttccataatttttaacaattaaaaattatt 27750395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 5064817 - 5064748
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||||||||| ||||||||||||||| ||||||||||||  |||| |||  |||||||| |||||||    
T  5064817 atctttttcaaaggaaaattaaatgcaaagtgcattcaatttactctctttttcattttctctataatca 5064748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 23978277 - 23978208
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||| |||| |||  |||||||| |||||||    
T  23978277 atcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatca 23978208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 37911874 - 37911943
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| |||||| |||||| |||| ||| ||||||||| |||||||    
T  37911874 atcttttccaaaggaaaattaaatgcaaagtgcattgaatttgctctcttttttattttctctataatca 37911943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 17799298 - 17799230
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataa 258  Q
    ||||||||| |||||| ||| ||||||||||||||||| |||||||||||| |   |||||||||||||    
T  17799298 tcatcttttccaaagtgaaactaaatgcaaattgcatttaatttgttctccctctcattttctccataa 17799230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 40411091 - 40411152
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctc 253  Q
    |||||||| |||||||||||||||| ||| ||||||||||||| |||| |||  ||||||||    
T  40411091 atcttttttaaagtaaaattaaatgtaaactgcattcaatttgatctctttttcattttctc 40411152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 1585496 - 1585424
Alignment:
Q  205 taaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||||||||||| ||||| ||||||||||  ||||  ||| |||||||||||||||| || ||||||| ||||    
T  1585496 taaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaatt 1585424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 32410321 - 32410385
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataat 259  Q
    |||| ||||| ||||||||||||||| || |||||||||| |||| ||| ||||||||| |||||    
T  32410321 ttttccaaaggaaaattaaatgcaaagtgtattcaatttgctctcttttttattttctctataat 32410385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 40553757 - 40553825
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataa 258  Q
    ||||||||| |||||  ||||||||||||||||||||||| |||  ||||||||  | |||||||||||    
T  40553757 tcatcttttccaaagagaaattaaatgcaaattgcattcattttactctccttttcactttctccataa 40553825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 49080250 - 49080294
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc 239  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||    
T  49080250 tttttcaaaggaaaattaaatgcaaagtgcattcaatttgatctc 49080294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 53848455 - 53848499
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttg 234  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||    
T  53848455 tcatctttttcaaagaaaaaataaatgcaaagtgcattcaatttg 53848499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 236
Target Start/End: Complemental strand, 17236373 - 17236342
Alignment:
Q  205 taaaattaaatgcaaattgcattcaatttgtt 236  Q
    ||||||||||||||||||||||||||||||||    
T  17236373 taaaattaaatgcaaattgcattcaatttgtt 17236342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 8178387 - 8178322
Alignment:
Q  206 aaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaata 271  Q
    ||||||||||||||| ||||||||||||| |||| ||||| |||||||| |||| || |||||||||    
T  8178387 aaaattaaatgcaaagtgcattcaatttgctctctctttc-attttctcaataaccaataaccaata 8178322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 46070682 - 46070641
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaattt 233  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||    
T  46070682 atcttttccaaaggaaaattaaatgcaaagtgcattcaattt 46070641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 8e-30; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 44875165 - 44875255
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  44875165 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 44875255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 40220044 - 40220132
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  40220044 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 40220132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 18036530 - 18036620
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||  ||||||||| |||||||||    
T  18036530 tcatcttttccaaagtaaaattaaatgcaaattgcattcaatttattctcctttttattttcttcataatttttaaccaatgagaattatt 18036620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 25990734 - 25990824
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| | |||||||    
T  25990734 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatt 25990824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 40960648 - 40960558
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  40960648 tcatctttttcaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 40960558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 46949307 - 46949397
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||  ||||||||| | |||||||    
T  46949307 tcatctttttcaatgtaaaattaaatgcaaattgtattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatt 46949397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 15285790 - 15285879
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | |||||||||||||  ||||||||| |||||||||    
T  15285790 tcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttct-cttttttttttctccataatttttaaccaatgagaattatt 15285879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 28017644 - 28017734
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||| | |||||||    
T  28017644 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgataattatt 28017734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 31970483 - 31970393
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  31970483 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 31970393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 40935787 - 40935697
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  40935787 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 40935697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 43656211 - 43656121
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| | |||||||    
T  43656211 tcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttcttcataatttttaaccaatgaaaattatt 43656121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 18852214 - 18852299
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| ||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  ||||||||| |||||||||    
T  18852214 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttcccctttttattttctccataatttttaaccaatgagaattatt 18852299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 26907261 - 26907184
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaa 269  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||  ||||||||    
T  26907261 atctttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaa 26907184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 9128029 - 9128119
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| ||  ||||| |||||||||||||||  ||||||||| |||||||||    
T  9128029 tcatctttttcaatgtaaaattaaatgtaaattgcattcaatttatttacctttttattttctccataatttttaaccaatgagaattatt 9128119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 23874001 - 23873911
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||  ||||||||| | |||||||    
T  23874001 tcatcttttccaatgtaaaattaaatgcaaattgcatttaatttgttctcttttttattttctccataatttttaaccaatgaaaattatt 23873911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 28916689 - 28916599
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||| |||||||||||||||  ||||||||| | |||||||    
T  28916689 tcatcttttccaatataaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatt 28916599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 29488739 - 29488821
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||| ||||||    
T  29488739 ttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatt 29488821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 35941827 - 35941917
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||  |||| |||| | |||||||    
T  35941827 tcatctttttcaatgtaaaattaaatacaaattgcattcaatttgttctcttttttattttctccataatttttaatcaatgaaaattatt 35941917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 36383924 - 36383994
Alignment:
Q  200 caaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaat 270  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||| |||||    
T  36383924 caaagtaaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataataattagccaat 36383994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 38942615 - 38942525
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||| ||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||| | |||||||    
T  38942615 tcattttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatt 38942525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 39026420 - 39026330
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||| ||| |||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||  |||||||||||||||||||    
T  39026420 tcatattttccaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaataagaattatt 39026330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 44056471 - 44056385
Alignment:
Q  191 catctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||  |||||||  |||||||||||||||||||||||||| ||||||    
T  44056471 catctttttcagagtaaaattaaatgcaatttgcattccattttctctccttcttattttctccataatcattaaccaatgagaatt 44056385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 47996940 - 47997030
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||  ||||| ||| |||||||||    
T  47996940 tcatcttttccaatgtaaaattaaatacaaattgtattcaatttgttctcctttttattttctccataatttttaactaatgagaattatt 47997030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 6848480 - 6848390
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| |||  |||||||||||||||||||||||||||  ||| |||||| |||||||||||||||  ||||||||| |||||||||    
T  6848480 tcatcttttccaatctaaaattaaatgcaaattgcattcaatgcgttatcctttttattttctccataatttttaaccaatgagaattatt 6848390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 280
Target Start/End: Original strand, 15311165 - 15311253
Alignment:
Q  191 catctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||||| |||||||||||||||  ||| ||||||||||||||||||| ||||||||| |||||  ||||||||| |||||||||    
T  15311165 catctttttcaatgtaaaattaaatgcag-ttgtattcaatttgttctcctttttattttctctataatttttaaccaatgagaattatt 15311253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 35189189 - 35189277
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||| |||||||||| | ||||||||||||||| ||||||||| | |||||||||||||||  ||||||||| | |||||||    
T  35189189 atctttttcaatgtaaaattaactacaaattgcattcaatgtgttctcctctttattttctccataatttttaaccaatgaaaattatt 35189277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 4529173 - 4529263
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||| ||| ||||||||||||||||||||||||||||||||||| |||| | |||||||||||||  |||||  || |||||||||    
T  4529173 tcattttttccaatgtaaaattaaatgcaaattgcattcaatttgttcttctttttgttttctccataatttttaacagatgagaattatt 4529263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 26479725 - 26479815
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||| |||| |||||||||||||| ||||||||||| ||||||||| ||| |  ||||||||| |||||||||    
T  26479725 tcatcttttccaatgtaaaattcaatgaaaattgcattcaatatgttctcctttttattttctctatagtttttaaccaatgagaattatt 26479815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 45358050 - 45357960
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||| ||  ||||||| ||||||||| ||||| |||||||||||||||  ||||||||| |||||||||    
T  45358050 tcatcttttccaatgtaaaattaaatacatgttgcatttaatttgttcacctttttattttctccataatttttaaccaatgagaattatt 45357960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 49924405 - 49924495
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| || |||| ||||||||||||||| |||||||| ||| ||  ||||||||| |||||||||    
T  49924405 tcatcttttccaatgtaaaattaaatgcaagttacatttaatttgttctcctttttattttcttcatgatttttaaccaatgagaattatt 49924495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 25185473 - 25185404
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||| |||  |||||||| |||||||    
T  25185473 atcttttccaaagaaaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatca 25185404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 41063733 - 41063821
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||  ||  |||||||| ||||  | |||||||| | |||||||    
T  41063733 atctttttcaaagaaaaattaaatgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattatt 41063821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 35884212 - 35884287
Alignment:
Q  205 taaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||||||||||||| ||| |||||| |||| ||||||||| |||||  ||||||||| | |||||||    
T  35884212 taaaattaaatgcaaattgcattaaatgtgttcttctttttattttctctataatttttaaccaatgaaaattatt 35884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 44510386 - 44510319
Alignment:
Q  194 ctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||| ||||| ||||||||||||||| ||||||||||||| ||||||||  |||||||| |||||||    
T  44510386 cttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataatca 44510319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 18913520 - 18913454
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccat 256  Q
    ||||||||| ||| |||||||||||||||| ||||||| |||||||||| |||| ||| ||||||||    
T  18913520 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcttctttttatgttctccat 18913454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 37735537 - 37735467
Alignment:
Q  207 aaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaatt 277  Q
    |||||||||||||||| ||||||||||  |||| |||| |||||||||||||||| || ||||||| ||||    
T  37735537 aaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaatt 37735467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 5858540 - 5858493
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc 239  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  5858540 atctttttcaaaggaaaattaaatgcaaagtgcattcaatttgctctc 5858493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 13351686 - 13351741
Alignment:
Q  206 aaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    |||| |||||||||| ||||||||||||||||||||||  |||||||| |||||||    
T  13351686 aaaactaaatgcaaagtgcattcaatttgttctccttttcattttctctataatca 13351741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 15912188 - 15912251
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctc 253  Q
    |||| |||| ||||| ||||||||||||||| ||||||||||||| ||||||||  ||||||||    
T  15912188 tcattttttccaaagaaaaattaaatgcaaactgcattcaatttgctctccttttcattttctc 15912251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 45840231 - 45840165
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||| |||  ||||| || |||||||    
T  45840231 tttttcaaagaaaaattaaatgcaaagtgcattcaatttgctctctttttcattttttctataatca 45840165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 7397698 - 7397767
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||| |||  |||  |||||||| |||||||    
T  7397698 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctttttttcattttctctataatca 7397767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 42724090 - 42724134
Alignment:
Q  196 ttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcc 240  Q
    |||||||||| ||||||||||||||||||||| |||||| |||||    
T  42724090 ttttcaaagtgaaattaaatgcaaattgcatttaatttgctctcc 42724134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 16661507 - 16661554
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc 239  Q
    |||||||||||   ||||||||||||||| ||||||||||||||||||    
T  16661507 atctttttcaatagaaaattaaatgcaaagtgcattcaatttgttctc 16661554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 37192921 - 37192862
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttc 251  Q
    ||||||| |||||| |||||| |||||||  |||||||||||||||| ||||| ||||||    
T  37192921 atcttttccaaagtgaaattatatgcaaacggcattcaatttgttcttctttccattttc 37192862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 34102143 - 34102095
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctc 239  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||| ||||    
T  34102143 tcatctttttcaaaggaaaattaaatgcaaagtgca-tcaatttgctctc 34102095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 50176504 - 50176544
Alignment:
Q  194 ctttttcaaagtaaaattaaatgcaaattgcattcaatttg 234  Q
    ||||||||||| |||||||||| |||| |||||||||||||    
T  50176504 ctttttcaaagcaaaattaaatacaaagtgcattcaatttg 50176544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 12278696 - 12278782
Alignment:
Q  195 tttttcaaa-gtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  12278696 tttttcaaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatt 12278782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 10227898 - 10227988
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| |||  ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  10227898 tcatcttttccaatataaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatt 10227988  T

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Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 17721980 - 17721890
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||| ||| |||||||||    
T  17721980 tcatattttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaacaaatgagaattatt 17721890  T

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Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 33756242 - 33756332
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||  ||||||||| |||||||||    
T  33756242 tcatttttttcaatgtaaaattaaatgcaaattgcattcaatttgtcctccttttcattttctccataatttttaaccaatgagaattatt 33756332  T

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Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 30766437 - 30766522
Alignment:
Q  195 tttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||| ||| |||||||||    
T  30766437 tttttcaatgtaaaattaaatgcaaattgcattgaatttgttctcctttttattttctccataatttttaactaatgagaattatt 30766522  T

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Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 17598282 - 17598369
Alignment:
Q  193 tctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||| ||| |||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||  ||||||||| |||||||||    
T  17598282 tcttttccaatgtaaaattaaatgcaaattgcattcaatttattctcttttttattttctccataatttttaaccaatgagaattatt 17598369  T

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Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 30949121 - 30949211
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||| ||||||||| |||||  ||||||||| |||||||||    
T  30949121 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctctataatttttaaccaatgagaattatt 30949211  T

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Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 31887292 - 31887202
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||  ||||||||||| |||||||    
T  31887292 tcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcttttttattttctccataatttttaaccaataaaaattatt 31887202  T

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Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 374099 - 374175
Alignment:
Q  204 gtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||| | |||||||    
T  374099 gtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctctataatttttaaccaatgaaaattatt 374175  T

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Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 21963944 - 21964033
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    |||||||||| |||||||||||||||| ||||| ||| |||||||||||| ||| |||||||||||| |||| |||||||||| |||||||    
T  21963944 tcatcttttt-aaagtaaaattaaatgtaaatttcatacaatttgttctcttttttattttctccatgatcaataaccaataaaaattatt 21964033  T

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Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 32882864 - 32882806
Alignment:
Q  190 tcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctatt 248  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32882864 tcatcttttccaaagtaaaattaaatgcaaatcgcattcaatttgttctcctttctatt 32882806  T

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Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 3888417 - 3888486
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| |||  |||||||| |||||||    
T  3888417 atctttttcaaaggaaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatca 3888486  T

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Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 4987933 - 4988002
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||| |||  |||||||| |||||||    
T  4987933 atctttttcaaaggaaaattaaatgcaaaatgcattcaatttgctctcattttcattttctctataatca 4988002  T

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Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 16524384 - 16524438
Alignment:
Q  206 aaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||    
T  16524384 aaaattaaatgcaaagtgcattcaatttgttctcttttc-attttctctataatca 16524438  T

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Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 4031991 - 4032046
Alignment:
Q  206 aaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||||||||||| ||||||||||||| |||| |||  |||||||| |||||||    
T  4031991 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatca 4032046  T

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Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 17751894 - 17751835
Alignment:
Q  211 taaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaat 270  Q
    |||||||||||| |||||||||| |||||  ||| |||||||||||||||| || |||||    
T  17751894 taaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaat 17751835  T

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Target: scaffold0495 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 4631 - 4706
Alignment:
Q  205 taaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattatt 280  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  4631 taaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatt 4706  T

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Target: scaffold0330 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 3160 - 3229
Alignment:
Q  192 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatca 261  Q
    ||||||| ||||| ||||||| ||||||| ||||||||||||||| || |||  |||||||| |||||||    
T  3160 atcttttccaaagcaaaattatatgcaaagtgcattcaatttgttttctttttcattttctctataatca 3229  T

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Target: scaffold0565 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 6045 - 6003
Alignment:
Q  191 catctttttcaaagtaaaattaaatgcaaattgcattcaattt 233  Q
    |||||||||||||  ||||||||||||||| ||||||||||||    
T  6045 catctttttcaaaagaaaattaaatgcaaagtgcattcaattt 6003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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