View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14351_high_14 (Length: 279)
Name: NF14351_high_14
Description: NF14351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14351_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 17 - 264
Target Start/End: Original strand, 16646518 - 16646761
Alignment:
| Q |
17 |
tggatataaggcatatgtagccaaatatagtagttgctaacaagaccagcttacttgcattacaagtaagtatgttaaaccaaaattatgtttaatcttc |
116 |
Q |
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| T |
16646518 |
tggatataaggcatatgtagccaaatatagtagttgctaacaagaccagcttacttgcattacaagtaagtatgttaaaccaaaattatgtttaatcttc |
16646617 |
T |
|
| Q |
117 |
atttatgctattctcgtcttccttattcatgtcagcctataattcttgctcctttggattttcgttccaattccaactttttgttttctcaaacaccata |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
16646618 |
atttatgctattctcgtcttccttattcatgtcagcctataattcttgctcctttggattttcgttccaattccaactttttgttttctcaaatacc--- |
16646714 |
T |
|
| Q |
217 |
tatatctctacttattatcaccatattctgtgtggccttggattcatt |
264 |
Q |
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| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16646715 |
-acatctctacttattatcaccatattctgtgtggccttggattcatt |
16646761 |
T |
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