View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14351_high_24 (Length: 221)

Name: NF14351_high_24
Description: NF14351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14351_high_24
NF14351_high_24
[»] chr4 (58 HSPs)
chr4 (19-174)||(46441961-46442116)
chr4 (19-174)||(53123148-53123303)
chr4 (27-176)||(47290191-47290340)
chr4 (27-170)||(9088995-9089138)
chr4 (31-172)||(36073479-36073619)
chr4 (27-173)||(44893007-44893153)
chr4 (27-172)||(44893551-44893696)
chr4 (27-174)||(31078612-31078759)
chr4 (19-174)||(36073064-36073223)
chr4 (19-174)||(2624954-2625109)
chr4 (27-170)||(24128364-24128507)
chr4 (27-173)||(50156373-50156518)
chr4 (30-174)||(49387680-49387825)
chr4 (19-174)||(4751563-4751719)
chr4 (72-176)||(22199429-22199533)
chr4 (27-173)||(7744906-7745052)
chr4 (19-173)||(21802114-21802270)
chr4 (73-173)||(10442581-10442682)
chr4 (72-172)||(33530479-33530579)
chr4 (72-162)||(23964269-23964359)
chr4 (72-170)||(17655600-17655699)
chr4 (75-174)||(11314044-11314144)
chr4 (72-175)||(37219801-37219905)
chr4 (27-141)||(30563334-30563448)
chr4 (82-175)||(24392854-24392947)
chr4 (74-172)||(42671840-42671939)
chr4 (72-173)||(37934735-37934837)
chr4 (96-168)||(33530676-33530749)
chr4 (106-172)||(25063369-25063436)
chr4 (96-168)||(10442777-10442850)
chr4 (96-168)||(31078807-31078880)
chr4 (96-168)||(49387876-49387949)
chr4 (96-168)||(2624841-2624914)
chr4 (96-168)||(7745100-7745173)
chr4 (96-168)||(21802310-21802383)
chr4 (96-168)||(22199265-22199338)
chr4 (96-168)||(24392671-24392744)
chr4 (96-168)||(36072951-36073024)
chr4 (96-168)||(46441848-46441921)
chr4 (96-168)||(47290070-47290143)
chr4 (80-179)||(36073249-36073349)
chr4 (96-168)||(53123034-53123108)
chr4 (96-168)||(4751450-4751523)
chr4 (96-168)||(24128243-24128316)
chr4 (96-168)||(36073354-36073427)
chr4 (80-171)||(44744610-44744698)
chr4 (96-168)||(44893430-44893503)
chr4 (96-166)||(42671675-42671746)
chr4 (96-142)||(17655461-17655507)
chr4 (96-141)||(9088902-9088947)
chr4 (96-160)||(23964453-23964518)
chr4 (96-168)||(50156566-50156639)
chr4 (27-59)||(10442697-10442729)
chr4 (96-159)||(36073731-36073795)
chr4 (96-168)||(44893201-44893275)
chr4 (96-168)||(37934929-37935002)
chr4 (26-59)||(44744558-44744591)
chr4 (19-59)||(36073651-36073691)
[»] chr1 (43 HSPs)
chr1 (19-174)||(36966501-36966656)
chr1 (27-173)||(19015529-19015675)
chr1 (35-176)||(51737638-51737779)
chr1 (27-175)||(41876234-41876382)
chr1 (27-172)||(6883612-6883757)
chr1 (27-172)||(37821629-37821774)
chr1 (27-171)||(40215113-40215257)
chr1 (27-172)||(25463801-25463946)
chr1 (19-172)||(9910086-9910241)
chr1 (19-174)||(44094815-44094969)
chr1 (26-172)||(25973533-25973677)
chr1 (72-176)||(20304921-20305025)
chr1 (72-174)||(18404618-18404720)
chr1 (72-172)||(3559787-3559887)
chr1 (82-175)||(33786423-33786516)
chr1 (82-172)||(32000061-32000151)
chr1 (82-170)||(40273888-40273976)
chr1 (96-172)||(19722894-19722970)
chr1 (75-182)||(44690806-44690914)
chr1 (72-175)||(10167569-10167673)
chr1 (96-169)||(33786623-33786696)
chr1 (96-168)||(16045786-16045859)
chr1 (96-168)||(40214992-40215065)
chr1 (96-168)||(40273706-40273779)
chr1 (27-174)||(27523048-27523195)
chr1 (96-168)||(18404446-18404519)
chr1 (96-168)||(25463680-25463753)
chr1 (96-168)||(44094702-44094775)
chr1 (100-171)||(52064373-52064445)
chr1 (96-168)||(6883491-6883564)
chr1 (96-168)||(9910281-9910354)
chr1 (96-168)||(19015408-19015481)
chr1 (96-168)||(32000255-32000328)
chr1 (96-168)||(36966696-36966769)
chr1 (96-168)||(37821822-37821895)
chr1 (80-134)||(52329453-52329507)
chr1 (96-168)||(3559621-3559694)
chr1 (19-59)||(44690937-44690977)
chr1 (29-59)||(40273829-40273859)
chr1 (30-59)||(32000175-32000204)
chr1 (29-62)||(33786540-33786573)
chr1 (100-168)||(41876434-41876503)
chr1 (80-172)||(22157333-22157425)
[»] chr5 (40 HSPs)
chr5 (27-173)||(4892327-4892473)
chr5 (27-176)||(25398363-25398512)
chr5 (27-172)||(33584124-33584269)
chr5 (28-173)||(3521801-3521945)
chr5 (19-173)||(37321587-37321741)
chr5 (19-171)||(3362895-3363048)
chr5 (27-172)||(6043307-6043451)
chr5 (27-169)||(12850926-12851069)
chr5 (19-172)||(38899520-38899674)
chr5 (72-172)||(8145543-8145643)
chr5 (27-172)||(2477761-2477906)
chr5 (32-173)||(14138798-14138938)
chr5 (27-151)||(11360947-11361071)
chr5 (72-173)||(12614531-12614633)
chr5 (82-172)||(22912852-22912942)
chr5 (19-130)||(4433845-4433955)
chr5 (82-173)||(17545476-17545567)
chr5 (96-168)||(22913042-22913115)
chr5 (96-168)||(2477640-2477713)
chr5 (96-168)||(6043499-6043572)
chr5 (96-160)||(8145387-8145452)
chr5 (96-168)||(11361119-11361192)
chr5 (101-160)||(10458409-10458469)
chr5 (27-141)||(31640767-31640880)
chr5 (96-168)||(3362782-3362855)
chr5 (96-168)||(4433995-4434068)
chr5 (96-168)||(4892206-4892279)
chr5 (96-168)||(12614721-12614794)
chr5 (96-141)||(17545673-17545718)
chr5 (96-168)||(25398242-25398315)
chr5 (32-155)||(27481952-27482077)
chr5 (96-168)||(38899714-38899787)
chr5 (79-134)||(13664736-13664791)
chr5 (96-160)||(3521994-3522059)
chr5 (96-168)||(12850805-12850878)
chr5 (96-168)||(33584317-33584390)
chr5 (96-168)||(37321781-37321855)
chr5 (142-175)||(12614483-12614516)
chr5 (29-58)||(17545594-17545623)
chr5 (96-141)||(31640928-31640973)
[»] scaffold0228 (6 HSPs)
scaffold0228 (27-176)||(26061-26210)
scaffold0228 (27-176)||(16109-16258)
scaffold0228 (27-105)||(8527-8605)
scaffold0228 (96-160)||(8414-8479)
scaffold0228 (96-160)||(15996-16061)
scaffold0228 (96-160)||(25948-26013)
[»] chr8 (64 HSPs)
chr8 (27-172)||(17841645-17841790)
chr8 (31-173)||(26041907-26042049)
chr8 (27-173)||(40779923-40780069)
chr8 (27-172)||(6108028-6108173)
chr8 (19-173)||(37985850-37986003)
chr8 (31-172)||(3596836-3596977)
chr8 (31-172)||(25581034-25581175)
chr8 (30-171)||(14128987-14129128)
chr8 (27-172)||(42754837-42754982)
chr8 (30-170)||(20091598-20091738)
chr8 (78-173)||(1503637-1503732)
chr8 (27-173)||(32064870-32065017)
chr8 (27-176)||(1645755-1645905)
chr8 (27-173)||(15187686-15187831)
chr8 (72-172)||(10044518-10044618)
chr8 (72-170)||(24211169-24211267)
chr8 (27-160)||(35353166-35353299)
chr8 (72-176)||(34665551-34665655)
chr8 (27-172)||(30055641-30055786)
chr8 (27-170)||(38017059-38017201)
chr8 (84-176)||(31347567-31347659)
chr8 (27-147)||(8453959-8454078)
chr8 (30-161)||(39772608-39772739)
chr8 (19-160)||(32393975-32394114)
chr8 (73-175)||(37132472-37132575)
chr8 (82-175)||(7022159-7022252)
chr8 (80-169)||(3890412-3890502)
chr8 (80-141)||(41819594-41819655)
chr8 (82-174)||(7017651-7017743)
chr8 (92-173)||(30834849-30834931)
chr8 (96-168)||(32064749-32064822)
chr8 (96-168)||(34665386-34665459)
chr8 (96-168)||(17841838-17841911)
chr8 (96-168)||(20091789-20091862)
chr8 (72-172)||(24844655-24844756)
chr8 (96-168)||(31347770-31347843)
chr8 (96-168)||(40780117-40780190)
chr8 (96-160)||(42755030-42755095)
chr8 (96-167)||(25581227-25581299)
chr8 (96-169)||(24844847-24844920)
chr8 (96-168)||(7017853-7017926)
chr8 (96-160)||(7021990-7022055)
chr8 (96-168)||(8453838-8453911)
chr8 (96-168)||(14128868-14128941)
chr8 (96-168)||(15187564-15187637)
chr8 (96-168)||(26042104-26042177)
chr8 (96-168)||(27782105-27782178)
chr8 (96-168)||(32393862-32393935)
chr8 (96-168)||(35353045-35353118)
chr8 (96-168)||(37986043-37986116)
chr8 (96-160)||(30835035-30835099)
chr8 (105-160)||(38016983-38017039)
chr8 (103-141)||(3890611-3890649)
chr8 (96-160)||(6108221-6108286)
chr8 (96-168)||(27835441-27835514)
chr8 (96-160)||(39772789-39772854)
chr8 (27-59)||(24211461-24211493)
chr8 (32-132)||(27835288-27835388)
chr8 (110-160)||(1886621-1886672)
chr8 (29-59)||(7017773-7017803)
chr8 (29-59)||(7022105-7022135)
chr8 (107-168)||(37132657-37132719)
chr8 (96-141)||(3817918-3817963)
chr8 (19-59)||(10044460-10044500)
[»] chr2 (41 HSPs)
chr2 (19-172)||(23267857-23268010)
chr2 (27-172)||(33380332-33380477)
chr2 (27-172)||(35160882-35161029)
chr2 (27-172)||(7475303-7475448)
chr2 (27-172)||(10662012-10662158)
chr2 (19-168)||(3989193-3989342)
chr2 (27-172)||(9293370-9293516)
chr2 (27-175)||(13354972-13355121)
chr2 (19-169)||(31174633-31174782)
chr2 (82-173)||(43331092-43331183)
chr2 (27-131)||(21936207-21936311)
chr2 (72-176)||(22592880-22592987)
chr2 (82-170)||(21393483-21393570)
chr2 (82-172)||(9723586-9723677)
chr2 (82-174)||(34320961-34321042)
chr2 (72-141)||(16767288-16767357)
chr2 (96-168)||(14941354-14941427)
chr2 (96-168)||(9293564-9293637)
chr2 (96-168)||(10661891-10661964)
chr2 (96-168)||(21936085-21936158)
chr2 (96-168)||(23268050-23268123)
chr2 (96-160)||(31174822-31174887)
chr2 (96-168)||(35160761-35160834)
chr2 (127-172)||(39819272-39819317)
chr2 (96-168)||(43330916-43330989)
chr2 (82-151)||(37335824-37335894)
chr2 (72-132)||(14941199-14941259)
chr2 (96-168)||(7475496-7475569)
chr2 (96-160)||(13354858-13354923)
chr2 (96-168)||(21393676-21393749)
chr2 (96-160)||(27847644-27847709)
chr2 (96-168)||(33380211-33380284)
chr2 (97-142)||(37335744-37335789)
chr2 (19-59)||(16767380-16767420)
chr2 (29-59)||(21393596-21393626)
chr2 (29-59)||(43331039-43331069)
chr2 (96-141)||(3989108-3989153)
chr2 (96-168)||(9723409-9723482)
chr2 (108-160)||(22591494-22591547)
chr2 (31-59)||(9723534-9723562)
chr2 (142-174)||(27847801-27847833)
[»] chr3 (49 HSPs)
chr3 (27-174)||(3137207-3137354)
chr3 (19-172)||(37522170-37522323)
chr3 (26-176)||(22426136-22426285)
chr3 (32-174)||(34482681-34482823)
chr3 (19-174)||(3456181-3456336)
chr3 (26-176)||(33113917-33114068)
chr3 (27-172)||(30385526-30385670)
chr3 (28-172)||(3574321-3574465)
chr3 (28-172)||(19650695-19650838)
chr3 (35-174)||(37216846-37216985)
chr3 (72-171)||(8320378-8320477)
chr3 (72-174)||(6042047-6042149)
chr3 (72-172)||(3089589-3089689)
chr3 (72-172)||(2754889-2754989)
chr3 (72-174)||(48161076-48161178)
chr3 (72-170)||(33145882-33145980)
chr3 (29-175)||(36864824-36864969)
chr3 (72-172)||(47738281-47738382)
chr3 (72-172)||(26612916-26613017)
chr3 (82-174)||(40328011-40328104)
chr3 (82-174)||(8361832-8361924)
chr3 (72-175)||(42921295-42921399)
chr3 (82-173)||(41224414-41224505)
chr3 (82-172)||(9796824-9796914)
chr3 (72-160)||(33839705-33839794)
chr3 (72-171)||(46919064-46919164)
chr3 (73-172)||(24343720-24343820)
chr3 (19-172)||(42297981-42298122)
chr3 (96-168)||(2754721-2754794)
chr3 (96-168)||(3137402-3137475)
chr3 (96-168)||(3574515-3574588)
chr3 (96-168)||(6041888-6041961)
chr3 (96-160)||(9797017-9797082)
chr3 (96-168)||(33145717-33145789)
chr3 (83-157)||(41883031-41883106)
chr3 (96-141)||(8362033-8362078)
chr3 (96-168)||(11347272-11347345)
chr3 (96-168)||(37217041-37217114)
chr3 (96-160)||(47738117-47738182)
chr3 (96-160)||(19650888-19650953)
chr3 (96-168)||(30385015-30385088)
chr3 (96-168)||(34482898-34482971)
chr3 (96-141)||(41883211-41883256)
chr3 (27-59)||(30385136-30385168)
chr3 (19-59)||(33839648-33839688)
chr3 (19-59)||(40327942-40327982)
chr3 (72-109)||(11347439-11347476)
chr3 (96-160)||(22426332-22426397)
chr3 (96-160)||(26612797-26612862)
[»] chr7 (39 HSPs)
chr7 (27-173)||(48880721-48880867)
chr7 (19-172)||(24395089-24395241)
chr7 (19-172)||(30848686-30848839)
chr7 (28-174)||(3962105-3962250)
chr7 (19-173)||(45637829-45637982)
chr7 (26-173)||(42611935-42612082)
chr7 (19-172)||(25167651-25167798)
chr7 (72-173)||(35445567-35445668)
chr7 (72-176)||(15329444-15329548)
chr7 (19-170)||(4974532-4974683)
chr7 (19-176)||(15577638-15577798)
chr7 (72-172)||(34483008-34483108)
chr7 (72-172)||(35876414-35876514)
chr7 (19-173)||(42696200-42696355)
chr7 (29-171)||(37476876-37477018)
chr7 (72-163)||(29737314-29737406)
chr7 (82-175)||(18037157-18037250)
chr7 (82-173)||(15238564-15238655)
chr7 (75-170)||(20009895-20009991)
chr7 (96-168)||(4974723-4974796)
chr7 (96-168)||(42611815-42611888)
chr7 (96-168)||(45637716-45637789)
chr7 (99-168)||(15577841-15577911)
chr7 (96-168)||(15329277-15329350)
chr7 (96-168)||(34482839-34482912)
chr7 (96-168)||(48880915-48880988)
chr7 (96-141)||(15238414-15238459)
chr7 (96-168)||(24394976-24395049)
chr7 (96-168)||(35444562-35444635)
chr7 (107-168)||(37477079-37477141)
chr7 (106-172)||(40880641-40880706)
chr7 (96-168)||(3961983-3962056)
chr7 (96-160)||(18036990-18037055)
chr7 (96-168)||(25167838-25167911)
chr7 (96-168)||(29737143-29737216)
chr7 (108-172)||(36790271-36790336)
chr7 (96-168)||(36790454-36790527)
chr7 (29-58)||(15238509-15238538)
chr7 (19-59)||(34482952-34482991)
[»] scaffold0204 (2 HSPs)
scaffold0204 (27-172)||(4521-4666)
scaffold0204 (96-168)||(4400-4473)
[»] chr6 (36 HSPs)
chr6 (27-172)||(17175816-17175961)
chr6 (30-174)||(32702333-32702477)
chr6 (27-174)||(33696821-33696969)
chr6 (27-174)||(28675273-28675420)
chr6 (27-172)||(18365369-18365513)
chr6 (27-172)||(18370633-18370777)
chr6 (19-176)||(17705260-17705413)
chr6 (27-172)||(33695121-33695267)
chr6 (28-172)||(2309218-2309362)
chr6 (72-174)||(23290874-23290976)
chr6 (27-170)||(6031537-6031681)
chr6 (82-170)||(11548386-11548474)
chr6 (30-134)||(18889477-18889580)
chr6 (72-174)||(29693615-29693718)
chr6 (28-131)||(6127402-6127506)
chr6 (96-168)||(33695315-33695388)
chr6 (96-168)||(33696700-33696773)
chr6 (106-171)||(34238883-34238948)
chr6 (94-172)||(582522-582602)
chr6 (19-98)||(25987047-25987126)
chr6 (96-168)||(6127279-6127352)
chr6 (96-168)||(23291072-23291145)
chr6 (96-166)||(11548576-11548647)
chr6 (106-168)||(25986934-25986997)
chr6 (96-168)||(17176009-17176082)
chr6 (96-168)||(17705453-17705526)
chr6 (96-168)||(18365561-18365634)
chr6 (96-168)||(18370825-18370898)
chr6 (96-168)||(28675152-28675225)
chr6 (96-168)||(18889685-18889757)
chr6 (118-172)||(2121004-2121059)
chr6 (27-104)||(9752109-9752185)
chr6 (96-141)||(9752233-9752278)
chr6 (106-168)||(8515723-8515786)
chr6 (96-160)||(32702217-32702282)
chr6 (27-59)||(29693563-29693595)
[»] scaffold0471 (2 HSPs)
scaffold0471 (27-170)||(12967-13110)
scaffold0471 (96-168)||(12846-12919)
[»] scaffold0178 (2 HSPs)
scaffold0178 (27-172)||(11746-11891)
scaffold0178 (96-168)||(11625-11698)
[»] scaffold0085 (2 HSPs)
scaffold0085 (27-172)||(47975-48119)
scaffold0085 (96-168)||(47854-47927)
[»] scaffold0096 (2 HSPs)
scaffold0096 (27-172)||(41136-41280)
scaffold0096 (96-168)||(41015-41088)
[»] scaffold0665 (1 HSPs)
scaffold0665 (96-168)||(3072-3145)
[»] scaffold0041 (1 HSPs)
scaffold0041 (106-172)||(85577-85642)


Alignment Details
Target: chr4 (Bit Score: 124; Significance: 6e-64; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 46441961 - 46442116
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  46441961 atctcaacctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 46442060  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46442061 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 46442116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 53123148 - 53123303
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||| ||||||||||||    
T  53123148 atctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgc 53123247  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53123248 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 53123303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 47290191 - 47290340
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  47290191 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcat 47290290  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47290291 tcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 47290340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 9088995 - 9089138
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9088995 ctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcat 9089094  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcatttt 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9089095 tcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 31 - 172
Target Start/End: Original strand, 36073479 - 36073619
Alignment:
Q  31 ccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 130  Q
    ||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36073479 ccggaaatcatggggtggtgggtgttatgtatcttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 36073577  T
Q  131 gaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36073578 gaatttttcttataaaatcattcttgatatctagcattttcc 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 27 - 173
Target Start/End: Complemental strand, 44893153 - 44893007
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||| |||||||||| |||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44893153 ctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 44893054  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  44893053 tcttaaatttttcttataaaatcattcttgatatctagcattttcct 44893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 44893551 - 44893696
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||| |||||||||| |||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44893551 ctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 44893650  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  44893651 tcttaaatttttcttataaaatcattcttgatatctagcattttcc 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 31078759 - 31078612
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||| ||||||||||| |||        ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  31078759 ctggccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcat 31078660  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  31078659 tcttgaattttttttataaaatcattcttgatatctagcattttcctt 31078612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 36073064 - 36073223
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn----atgaaagattaataaatgagactgaaatctaaaggtgattatt 114  Q
    |||||| |||||||||||||||||||||||||||||||||| |||            ||||||||||||||||||||||||||||||||||||| |||||    
T  36073064 atctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttttttatgaaagattaataaatgagactgaaatctaaaggtggttatt 36073163  T
Q  115 gtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36073164 gtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttcctt 36073223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 2624954 - 2625109
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  2624954 atctcagtctggccggaaatcatggagtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 2625053  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
     |||||||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  2625054 tatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttcctt 2625109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 24128364 - 24128507
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  24128364 ctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcat 24128463  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcatttt 170  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  24128464 tcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 27 - 173
Target Start/End: Complemental strand, 50156518 - 50156373
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||| |||||||||| || ||||||||    
T  50156518 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatgtcat 50156420  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  50156419 tcttgaatttttcttataaaatcattcttgatatctaacattttcct 50156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 49387825 - 49387680
Alignment:
Q  30 gccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattc 128  Q
    |||||||||||||||||||||| ||||||| |||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49387825 gccggaaatcatggggtggtggatgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattc 49387726  T
Q  129 ttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  49387725 ttgaatttttcttataaaatcatccttgatatctaacattttcctt 49387680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 4751563 - 4751719
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtg 117  Q
    |||||| ||||| |||||||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||||| ||||||||    
T  4751563 atctcagtctggtcggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtg 4751662  T
Q  118 ccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  4751663 ccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttcctt 4751719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 72 - 176
Target Start/End: Original strand, 22199429 - 22199533
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  22199429 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 22199528  T
Q  172 ctttt 176  Q
    |||||    
T  22199529 ctttt 22199533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 173
Target Start/End: Complemental strand, 7745052 - 7744906
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| ||         |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||    
T  7745052 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcat 7744953  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||    
T  7744952 tcttgaatctttcttataaaatcattcttgatatctaacattttcct 7744906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 21802270 - 21802114
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgg---gtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattg 115  Q
    |||||| ||||||||||||||||||||||||||   |||||||| ||         |||||||||||||||||||||||||||||||| |||||||||||    
T  21802270 atctcagtctggccggaaatcatggggtggtggtgggtgttatgtat-ttttttttatgaaagattaataaatgagactgaaatctaagggtgattattg 21802172  T
Q  116 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21802171 tgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 21802114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 10442682 - 10442581
Alignment:
Q  73 tgaaagattaa-taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10442682 tgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10442583  T
Q  172 ct 173  Q
    ||    
T  10442582 ct 10442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T
Q  172 c 172  Q
    |    
T  33530479 c 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 23964359 - 23964269
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatct 162  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  23964359 atgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 17655600 - 17655699
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 170  Q
    ||||||| |||||||||||||||||||||||||||| |||||| || |||||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  17655600 atgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 11314144 - 11314044
Alignment:
Q  75 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 173  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T
Q  174 t 174  Q
    |    
T  11314044 t 11314044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 37219801 - 37219905
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 170  Q
    ||||||| ||||||||| ||| |||||||||| | |||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  171 ccttt 175  Q
    |||||    
T  37219901 ccttt 37219905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 30563334 - 30563448
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| ||         ||||||| ||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  30563334 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcat 30563433  T
Q  127 tcttgaatttttctt 141  Q
    |||||||| ||||||    
T  30563434 tcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 24392854 - 24392947
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccttt 175  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||| ||| ||||||   |||||||||||||||||||||||||| ||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttttcttt 24392947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 42671840 - 42671939
Alignment:
Q  74 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 172  Q
    ||||| |||| |||||||||| ||||||||   |||||||| || |||||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 37934837 - 37934735
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 170  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||| ||| ||||| |||||| |||||| ||||||||| || | ||||||| ||||||    
T  37934837 atgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacatttt 37934738  T
Q  171 cct 173  Q
    |||    
T  37934737 cct 37934735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 33530676 - 33530749
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 25063436 - 25063369
Alignment:
Q  106 gtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||| | ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 10442777 - 10442850
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 31078807 - 31078880
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 49387876 - 49387949
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 2624914 - 2624841
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 7745100 - 7745173
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 7745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 21802310 - 21802383
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 22199338 - 22199265
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 24392744 - 24392671
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||| ||| |||||||||| |||||||||||||||||||||||||| | |||||| |||||||||| |||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 36073024 - 36072951
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||| ||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 46441921 - 46441848
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 47290143 - 47290070
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 179
Target Start/End: Complemental strand, 36073349 - 36073249
Alignment:
Q  80 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttttga 178  Q
    ||||||||| ||||||||||||||  || |||||| || ||| |||||||| ||| |||||| ||||||||||| ||  ||||||||||||||| |||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttccatttga 36073250  T
Q  179 a 179  Q
    |    
T  36073249 a 36073249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 53123108 - 53123034
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt--ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||  | |||||| |||||||||| |||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcatt 53123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 4751523 - 4751450
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 4751450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 24128316 - 24128243
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 24128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 36073427 - 36073354
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||| ||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  36073427 aaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 44744610 - 44744698
Alignment:
Q  80 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    ||||||||| |||||||||||||| | | ||||||| | |||||||||||||||| |   | ||||||||||| |||||||||| |||||||    
T  44744610 ttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatct---tgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 44893503 - 44893430
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||| ||||||| | | |||||| |||||||||| |||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcatt 44893430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 42671746 - 42671675
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagca 166  Q
    |||||||| |||||||||| ||||||||||||||| ||||||| || |||||||| || ||||||| |||||    
T  42671746 aaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 17655507 - 17655461
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 142  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  17655507 aaatctaagggtgattattctgccatgtcattcttgaaattttctta 17655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 9088947 - 9088902
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 141  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaaattttctt 9088902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 23964453 - 23964518
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattctt-gaatttttcttataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||||||||||||  ||||||| | |||||||| ||||||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 23964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 50156566 - 50156639
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| ||||| |||| |||||||    
T  50156566 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcatt 50156639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 10442729 - 10442697
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||||||||||||||||||||||||||||||    
T  10442729 ctggccggaaatcatggggtggtgggtgttatg 10442697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgata 159  Q
    ||||||||| ||||||||| || |||||||||||| ||| |||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 44893201 - 44893275
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaa--tttttcttataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||||||  ||||| | | |||||| ||||| |||| |||||||    
T  44893201 aaatctaagggtgattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcatt 44893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 37934929 - 37935002
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttga-atttttcttataaaatcattcttgatatctagcatt 168  Q
    |||||||| ||||| |||| | ||||||||||||||| |||||| | |||||||| || ||||||| |||||||    
T  37934929 aaatctaagggtgagtattctaccatgtcattcttgacatttttttgataaaatcttttttgatatatagcatt 37935002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 44744558 - 44744591
Alignment:
Q  26 tctggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||||||||||||| |||||||||||||||||    
T  44744558 tctggccggaaatcatagggtggtgggtgttatg 44744591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 36073691 - 36073651
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||| | ||||||||||||||||||||||| ||||||||    
T  36073691 atctcagtttggccggaaatcatggggtggtgcgtgttatg 36073651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 1e-61; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 36966656 - 36966501
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  36966656 atctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 36966557  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36966556 catgttattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 36966501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 19015529 - 19015675
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19015529 ctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 19015628  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  19015629 tcttgaatttttcttataaaatcattcttgatatgtagcattttcct 19015675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 51737638 - 51737779
Alignment:
Q  35 aaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 134  Q
    ||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51737638 aaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 51737737  T
Q  135 ttttcttataaaatcattcttgatatctagcattttcctttt 176  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  51737738 ttttcttataaaatcattcttgatatctagcattttcctttt 51737779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 27 - 175
Target Start/End: Complemental strand, 41876382 - 41876234
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||| ||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41876382 ctggccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcat 41876283  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttccttt 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41876282 tcttgaatttttcttataaaatcattcttgatatctagcattttccttt 41876234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 6883612 - 6883757
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  6883612 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcat 6883711  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6883712 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 37821774 - 37821629
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||| ||||||||||||| ||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37821774 ctggccgaaaatcatggggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcat 37821675  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  37821674 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 40215113 - 40215257
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| ||         |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40215113 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 40215212  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  40215213 tcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 25463801 - 25463946
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25463801 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcat 25463900  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  25463901 tcttggatctttcttataaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 9910241 - 9910086
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattattgt 116  Q
    |||||| | ||||||||||||||||||||||||||||||||||||          ||||||||||||||||| || ||||||||||||||||||||||||    
T  9910241 atctcagtatggccggaaatcatggggtggtgggtgttatgcatcttttttttttatgaaagattaataaataagtctgaaatctaaaggtgattattgt 9910142  T
Q  117 gccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9910141 gccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttcc 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 44094815 - 44094969
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||||     
T  44094815 atctcagtctggccggaaatcatggggtggtgggtgttatgtat-ttttctttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgt 44094913  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  44094914 catgtcattcttggatctttcttataaaataattcttgatatctagcattttcctt 44094969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 25973533 - 25973677
Alignment:
Q  26 tctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 125  Q
    |||||||| ||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  25973533 tctggccgaaaatcatggggtggtgggtgttatgtat--tttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtca 25973630  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  25973631 ttcttgaatttttcttataaaatcattcttgatatctagcattttcc 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 72 - 176
Target Start/End: Complemental strand, 20305025 - 20304921
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20305025 atgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 20304926  T
Q  172 ctttt 176  Q
    |||||    
T  20304925 ctttt 20304921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 18404618 - 18404720
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T
Q  172 ctt 174  Q
    |||    
T  18404718 ctt 18404720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 3559787 - 3559887
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  3559787 atgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 3559886  T
Q  172 c 172  Q
    |    
T  3559887 c 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 82 - 175
Target Start/End: Complemental strand, 33786516 - 33786423
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccttt 175  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttccttt 33786423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 170  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 182
Target Start/End: Complemental strand, 44690914 - 44690806
Alignment:
Q  75 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 173  Q
    |||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||| |||||| ||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttttct 44690815  T
Q  174 tttgaattt 182  Q
    ||| |||||    
T  44690814 ttttaattt 44690806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 10167569 - 10167673
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 170  Q
    |||||| |||||||||| |||||||||||||||||||||||||||  ||| | |||||| ||| |||| |||||||||||||||| |||| || ||||||    
T  10167569 atgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacatttt 10167668  T
Q  171 ccttt 175  Q
    |||||    
T  10167669 ccttt 10167673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 33786623 - 33786696
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 169  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 16045786 - 16045859
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 40215065 - 40214992
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 27523195 - 27523048
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||| ||||||||||| ||         ||||||  ||||||||| ||||| ||||| || |||||||| | ||||||   ||    
T  27523195 ctggccggaaatcatggggtgatgggtgttatgtat-ttttttttatgaaaagttaataaataagactaaaatcaaagggtgattaatctgccatacgat 27523097  T
Q  127 tcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 174  Q
    |||||||| |||||| ||||||||||||||||||| || ||||||||||    
T  27523096 tcttgaatctttcttgataaaatcattcttgatatataacattttcctt 27523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 18404519 - 18404446
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    ||||||||||||||||||| | ||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 18404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 25463753 - 25463680
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcatt 25463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 44094775 - 44094702
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  100 ctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttc 171  Q
    |||| ||||| |||| || |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 6883564 - 6883491
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| ||||| |||| |||||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcatt 6883491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 9910281 - 9910354
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 9910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 19015481 - 19015408
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 19015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 32000255 - 32000328
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||| ||||| || ||||||||||||||||||||||| | |||||| |||||||||| |||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 36966696 - 36966769
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 37821822 - 37821895
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 52329453 - 52329507
Alignment:
Q  80 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 134  Q
    ||||||| | |||||||||||||| |||||||||| ||| |||||||||||||||    
T  52329453 ttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaat 52329507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 3559694 - 3559621
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattctt-gaatttttcttataaaatcattcttgatatctagcatt 168  Q
    |||| ||| |||||||||| |||||||||||||||  ||||||| | |||||||| |||||||||| |||||||    
T  3559694 aaatttaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 3559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 44690977 - 44690937
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||| |||||||||||||||||||||| |||||||||||    
T  44690977 atctcagtctggccggaaatcatggggtgttgggtgttatg 44690937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 59
Target Start/End: Original strand, 40273829 - 40273859
Alignment:
Q  29 ggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||||||||||||||||||||||||||||    
T  40273829 ggccggaaatcatggggtggtgggtgttatg 40273859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 59
Target Start/End: Complemental strand, 32000204 - 32000175
Alignment:
Q  30 gccggaaatcatggggtggtgggtgttatg 59  Q
    ||||||||||||||||||||||||||||||    
T  32000204 gccggaaatcatggggtggtgggtgttatg 32000175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 33786573 - 33786540
Alignment:
Q  29 ggccggaaatcatggggtggtgggtgttatgcat 62  Q
    ||||||||||||||||||||||| ||||||||||    
T  33786573 ggccggaaatcatggggtggtggatgttatgcat 33786540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 41876434 - 41876503
Alignment:
Q  100 ctaaaggtgattattgtgccatgtcattctt-gaatttttcttataaaatcattcttgatatctagcatt 168  Q
    |||| |||||||||| |||||||||||||||  ||||||| | | |||||| |||||||||| |||||||    
T  41876434 ctaagggtgattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatatatagcatt 41876503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 22157425 - 22157333
Alignment:
Q  80 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||| ||| |||||| |||  ||||||||| | ||||||||||||| |||   || ||  || ||||| |||||||||||||||||||    
T  22157425 ttaataaataagattgaaatttaagtgtgattattctcccatgtcattcttaaatccatcataagaattcatttttgatatctagcattttcc 22157333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 6e-61; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 4892327 - 4892473
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4892327 ctggccggaaatcatggggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 4892426  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4892427 tcttgaatttttcttataaaatcattcttgatatctagcattttcct 4892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 25398363 - 25398512
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25398363 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 25398462  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 176  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25398463 tgttgaatttttcttataaaatcattcttgatatctagcattttcctttt 25398512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 33584269 - 33584124
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33584269 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 33584170  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  33584169 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 3521945 - 3521801
Alignment:
Q  28 tggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 127  Q
    |||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3521945 tggccggaaatcatggggtggtgggtgttatgtatcttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 3521847  T
Q  128 cttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||    
T  3521846 cttaaatttttcttataaaatcattcttgatatctagcattttcct 3521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 37321741 - 37321587
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| ||| |||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  37321741 atctcagtctagccggaaatcatggggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 37321642  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37321641 catttcattcttgaatatttcttataaaatcattcttgatatctagcattttcct 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 3362895 - 3363048
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtg 117  Q
    |||||| |||||||||||||||||||||||||||||||||| |||         ||||||||||||||||||||||||||||||||||||| ||||||||    
T  3362895 atctcagtctggccggaaatcatggggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtg 3362994  T
Q  118 ccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3362995 tcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 6043451 - 6043307
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||| ||||||||||| ||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6043451 ctggccggaaatcatggggtgttgggtgttatgtat-ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 6043353  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  6043352 tcttaaatttttcttataaaatcattcttgatatctagcattttcc 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 12850926 - 12851069
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 125  Q
    ||||||||||||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12850926 ctggccggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtca 12851025  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcattt 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  12851026 ttcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 38899674 - 38899520
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||||||| ||||||||||||||||||||||||  |||        ||||||||||||||||||||||||||||||||||||| |||||||||    
T  38899674 atctcagtctggccgaaaatcatggggtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgc 38899575  T
Q  119 catgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  38899574 catgtcattcttgaatttttttttataaaatcattcttgatatctagcattttcc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 8145543 - 8145643
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8145543 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 8145642  T
Q  172 c 172  Q
    |    
T  8145643 c 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 2477761 - 2477906
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| ||         ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  2477761 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcat 2477860  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||  || |||||||||||||||||||||||||||||||||||||    
T  2477861 tcttagatctttcttataaaatcattcttgatatctagcattttcc 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 14138798 - 14138938
Alignment:
Q  32 cggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 131  Q
    |||||||||||||||||||||||||||| ||         ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14138798 cggaaatcatggggtggtgggtgttatgtat-ttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttg 14138896  T
Q  132 aatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    ||| |||||||||||||||||||| |||||||||||||||||    
T  14138897 aatctttcttataaaatcattcttaatatctagcattttcct 14138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 11361071 - 11360947
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| ||         ||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  11361071 ctggccggaaatcatggggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcat 11360972  T
Q  127 tcttgaatttttcttataaaatcat 151  Q
    |||||||| ||||||||||||||||    
T  11360971 tcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 12614633 - 12614531
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 170  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | |||||||||| ||||||||||||||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  171 cct 173  Q
    |||    
T  12614533 cct 12614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 4433955 - 4433845
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| ||||||||||||||||||| |||||||||||||| ||         ||||||||||||||||| |||||||||||||||||||||||||||||    
T  4433955 atctcagtctggccggaaatcatgggatggtgggtgttatgtat-ttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgc 4433857  T
Q  119 catgtcattctt 130  Q
    ||||||||||||    
T  4433856 catgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 17545567 - 17545476
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||| ||   |||||||||||||||||||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 17545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 22913042 - 22913115
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| | |||||| |||||||||| |||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 2477713 - 2477640
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2477640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 6043499 - 6043572
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| | |||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 11361119 - 11361192
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 10458469 - 10458409
Alignment:
Q  101 taaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||  ||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 31640880 - 31640767
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| ||         ||||||| ||||||||| |||    |||||||||  ||||||| |||||||||||    
T  31640880 ctggccggaaatcatggggtggtgggtgttatgtat-ttttttttatgaaaggttaataaataagatatcaatctaaagtcgattattctgccatgtcat 31640782  T
Q  127 tcttgaatttttctt 141  Q
    |||||||| ||||||    
T  31640781 tcttgaatctttctt 31640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 3362855 - 3362782
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 3362782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 4433995 - 4434068
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  4433995 aaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 4434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 4892279 - 4892206
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4892206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 12614721 - 12614794
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| |||||||  |||||||||| |||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 141  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 25398315 - 25398242
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 25398242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 155
Target Start/End: Original strand, 27481952 - 27482077
Alignment:
Q  32 cggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaa-tctaaaggtgattattgtgccatgtcattctt 130  Q
    |||||||||||||||||||||||||||| ||         || |||| ||||||||| ||| | ||| |||||||||||||||| ||  |||||||||||    
T  27481952 cggaaatcatggggtggtgggtgttatgtattttttttttataaaaggttaataaataagattaaaaatctaaaggtgattattctgttatgtcattctt 27482051  T
Q  131 gaat-ttttcttataaaatcattctt 155  Q
    |||| |||| | ||||||||||||||    
T  27482052 gaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 38899714 - 38899787
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 38899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 13664736 - 13664791
Alignment:
Q  79 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 134  Q
    |||||||||| |||||||||||||| |||||||||| |  ||||||||||||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaat 13664791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 3521994 - 3522059
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||||| | |||||| ||||||||||    
T  3521994 aaatctaatggtgattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatat 3522059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 12850878 - 12850805
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||| ||||| |||||||||||| ||| | ||||||| |||||||| |||||||||| |||||||    
T  12850878 aaatctaagggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcatt 12850805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 33584317 - 33584390
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||| ||| |||||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  33584317 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33584390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 37321781 - 37321855
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattctt-gatatctagcatt 168  Q
    |||| ||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||| ||||| |||||||    
T  37321781 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcatt 37321855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 12614483 - 12614516
Alignment:
Q  142 ataaaatcattcttgatatctagcattttccttt 175  Q
    ||||||||||||||||||||||||||||| ||||    
T  12614483 ataaaatcattcttgatatctagcatttttcttt 12614516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 58
Target Start/End: Complemental strand, 17545623 - 17545594
Alignment:
Q  29 ggccggaaatcatggggtggtgggtgttat 58  Q
    ||||||||||||||||||||||||||||||    
T  17545623 ggccggaaatcatggggtggtgggtgttat 17545594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 31640928 - 31640973
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 141  Q
    |||||||| |||| ||||| ||||||||||||||||||| ||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttctt 31640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 118; Significance: 2e-60; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 26061 - 26210
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    |||||||||||||||||| |||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26061 ctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 26160  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26161 tcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 26210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 16109 - 16258
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    |||||||||||||||||| |||||||||||||| |||        |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16109 ctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcat 16208  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16209 tcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 16258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 8527 - 8605
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaag 105  Q
    |||||||||||||||||| |||||||||||||| |||        ||||||||||||||||||||||||||||||||||    
T  8527 ctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 2e-60; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 17841790 - 17841645
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17841790 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 17841691  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  17841690 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 31 - 173
Target Start/End: Complemental strand, 26042049 - 26041907
Alignment:
Q  31 ccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 130  Q
    ||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26042049 ccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 26041950  T
Q  131 gaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26041949 gaatttttcttataaaatcattcttgatatctagcattttcct 26041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 27 - 173
Target Start/End: Complemental strand, 40780069 - 40779923
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40780069 ctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 40779970  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  40779969 tcttgaatttttcttataaaatcattcttgatatctagcattttcct 40779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 6108173 - 6108028
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6108173 ctggccggaaatcatggggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcat 6108074  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6108073 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 37986003 - 37985850
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||||||||||||||||||||||||||||||||| ||         |||||||||||||||||| ||||||||||||||||||||||||||||    
T  37986003 atctcagtctggccggaaatcatggggtggtgggtgttatgtat-ttttttttatgaaagattaataaatgggactgaaatctaaaggtgattattgtgc 37985905  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37985904 catgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 37985850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 3596977 - 3596836
Alignment:
Q  31 ccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 130  Q
    ||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3596977 ccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattctt 3596878  T
Q  131 gaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  3596877 aaatttttcttataaaatcattcttgatatctagcattttcc 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 25581175 - 25581034
Alignment:
Q  31 ccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 130  Q
    ||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  25581175 ccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattctt 25581076  T
Q  131 gaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25581075 gaatttttcttataaaatcattcttgatatctagcattttcc 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 14128987 - 14129128
Alignment:
Q  30 gccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 129  Q
    |||| ||||||| ||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14128987 gccgaaaatcatagggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 14129086  T
Q  130 tgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  14129087 tgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 42754982 - 42754837
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||| |||||||||| |||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42754982 ctggccgaaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcat 42754883  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  42754882 tcttaaatttttcttataaaatcattcttgatatctagcattttcc 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 20091738 - 20091598
Alignment:
Q  30 gccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 129  Q
    |||||||||||||||||||||||||||||| ||         ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20091738 gccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattct 20091639  T
Q  130 tgaatttttcttataaaatcattcttgatatctagcatttt 170  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  20091638 tgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 1503732 - 1503637
Alignment:
Q  78 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 1503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 32064870 - 32065017
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 125  Q
    |||||||||||||||||| || ||||||||||| |||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32064870 ctggccggaaatcatgggctgatgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtca 32064969  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32064970 ttcttaaatttttcttataaaatcattcttgatatctagcattttcct 32065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 1645905 - 1645755
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 125  Q
    |||| |||||||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1645905 ctggtcggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 1645806  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 176  Q
    ||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  1645805 ttcttggttctttcttataaaatcattcttgatatctagcattttcctttt 1645755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 15187686 - 15187831
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||| ||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15187686 ctggccggaaatcatggagtggtgggtgttatgtat-ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcat 15187784  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||    
T  15187785 tcttggatctttcttataaaatcattcttgatatctagcattttcct 15187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 10044518 - 10044618
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10044617  T
Q  172 c 172  Q
    |    
T  10044618 c 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 35353166 - 35353299
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    |||||||||||||||| |||||||||||||||| |||        ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  35353166 ctggccggaaatcatgaggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcat 35353265  T
Q  127 tcttgaatttttcttataaaatcattcttgatat 160  Q
    ||||||||||||||||||||||||||||||||||    
T  35353266 tcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 72 - 176
Target Start/End: Original strand, 34665551 - 34665655
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  34665551 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttt 34665650  T
Q  172 ctttt 176  Q
    |||||    
T  34665651 ctttt 34665655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 30055641 - 30055786
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||| ||||||| ||         ||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  30055641 ctggccggaaatcatggggtggtggatgttatgtattttttttttatgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcat 30055740  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||    
T  30055741 tcttgaatctttcttataaaatcattcttaatatctagcattttcc 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 38017059 - 38017201
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtga-ttattgtgccatgtca 125  Q
    ||||||||||||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  38017059 ctggccggaaatcatggggtggtgggtgttatgtattttttttt--tgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtca 38017156  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcatttt 170  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  38017157 ttcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 84 - 176
Target Start/End: Complemental strand, 31347659 - 31347567
Alignment:
Q  84 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcctttt 31347567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 8453959 - 8454078
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    |||||||||||| |||| ||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8453959 ctggccggaaattatggtgtggtgggtgttatgtatcttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 8454057  T
Q  127 tcttgaatttttcttataaaa 147  Q
    ||||||||| |||||||||||    
T  8454058 tcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 39772739 - 39772608
Alignment:
Q  30 gccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 129  Q
    ||||||||||||||| |||||||||||||| ||         |||||||||||||||| || |||||||||||||||||||||||||| |||||||||||    
T  39772739 gccggaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattct 39772640  T
Q  130 tgaatttttcttataaaatcattcttgatatc 161  Q
    || || ||||||||||||||||||||||||||    
T  39772639 tggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 32393975 - 32394114
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| ||| |||| ||||||||||||||| ||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||||     
T  32393975 atctcagtctagccgaaaatcatggggtggtaggtgttatgtat-ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtg- 32394072  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatat 160  Q
    |||||||||||| ||| ||| |||||||||||||||||||||    
T  32394073 catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 37132575 - 37132472
Alignment:
Q  73 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttc 171  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||| |||||| |||||||||||||||||||||||||||||     
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcattttt 37132476  T
Q  172 cttt 175  Q
    ||||    
T  37132475 cttt 37132472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 7022159 - 7022252
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccttt 175  Q
    |||||||||||||||||||||| || |||||||||| | |||||||||||||| ||||||   |||||||| ||||||||||||||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttccttt 7022252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  80 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 169  Q
    ||||||||| ||| | |||||||| |||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 41819655 - 41819594
Alignment:
Q  80 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 141  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 7017743 - 7017651
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    |||||||||||||||||||||| | |||||||| |   ||||||||||| ||| ||||||   ||||||||||||||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcctt 7017651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 30834931 - 30834849
Alignment:
Q  92 actgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 173  Q
    |||||||||||| |||| ||||| || |||||||||||| ||| |||||| |||||||||||||||||||||| |||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcct 30834849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 32064822 - 32064749
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 34665459 - 34665386
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 17841838 - 17841911
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 20091789 - 20091862
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 24844756 - 24844655
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 170  Q
    ||||||| ||||||| | ||| | ||||||||  ||||||||| ||||||| ||||||| ||| |||||| ||||||||||| |||||||||| ||||||    
T  24844756 atgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacatttt 24844657  T
Q  171 cc 172  Q
    ||    
T  24844656 cc 24844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 31347770 - 31347843
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| | |||||  |||||||||| |||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcatt 31347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 40780117 - 40780190
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 25581227 - 25581299
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcat 167  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||  ||||| | |||||||||| ||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 169  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| |||||||  |||||||||| ||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 7017853 - 7017926
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| | |||||| ||| |||||| |||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcatt 7017926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||| | |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 8453911 - 8453838
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 14128941 - 14128868
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || |||| || |||||||| |||||||||| |||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 14128868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 15187637 - 15187564
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| ||| |||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 26042104 - 26042177
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| ||||| |||| |||||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 27782105 - 27782178
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||| |||||| |||||| |||||||  |||||||||| |||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 32393935 - 32393862
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||| ||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  32393935 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 32393862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 35353118 - 35353045
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 35353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 37986043 - 37986116
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattctt-gaatttttcttataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||  ||||||| | |||||||| |||||||||| |||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 30835035 - 30835099
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 160  Q
    ||||| || |||||||||| |||||||||||||||||||||||   |||||||| ||||||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 38017039 - 38016983
Alignment:
Q  105 ggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  38017039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 3890611 - 3890649
Alignment:
Q  103 aaggtgattattgtgccatgtcattcttgaatttttctt 141  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  3890611 aaggtgattattctgccatgtcattcttgaatttttctt 3890649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 6108221 - 6108286
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  6108221 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 6108286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 27835441 - 27835514
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| | |||||||| | |||||||||||||||||||||||| |||| ||| || ||||||| |||||||    
T  27835441 aaatctaaggatgattattttaccatgtcattcttgaatttttcttaataagatctttattgatatatagcatt 27835514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 39772789 - 39772854
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||||||||||||| ||||||| | |||||||  ||||||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatat 39772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 24211493 - 24211461
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||||||||||||||||||||||||||||||    
T  24211493 ctggccggaaatcatggggtggtgggtgttatg 24211461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 27835388 - 27835288
Alignment:
Q  32 cggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 131  Q
    ||||||||||||| |||||||||||||| ||         || |||| ||||||||||||| |||||||||| | ||||||||||| ||| ||||| |||    
T  27835388 cggaaatcatgggatggtgggtgttatgtatttttgttttataaaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatcatttttg 27835289  T
Q  132 a 132  Q
    |    
T  27835288 a 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  110 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 59
Target Start/End: Complemental strand, 7017803 - 7017773
Alignment:
Q  29 ggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||||||||||||||||||||||||||||    
T  7017803 ggccggaaatcatggggtggtgggtgttatg 7017773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 59
Target Start/End: Original strand, 7022105 - 7022135
Alignment:
Q  29 ggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||||||||||||||||||||||||||||    
T  7022105 ggccggaaatcatggggtggtgggtgttatg 7022135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 37132657 - 37132719
Alignment:
Q  107 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| ||||||||||||||| |||||||||| |||||||  || ||||||| |||||||    
T  37132657 tgattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcatt 37132719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 3817918 - 3817963
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 141  Q
    |||||||| |||||||||| || ||||| |||||||||||||||||    
T  3817918 aaatctaagggtgattattctgtcatgtaattcttgaatttttctt 3817963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 10044460 - 10044500
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||||||||| |||||||||||| ||||||| |||||||    
T  10044460 atctcaatctggtcggaaatcatggagtggtggttgttatg 10044500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 2e-60; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 23268010 - 23267857
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  23268010 atctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 23267911  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23267910 catgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 33380332 - 33380477
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33380332 ctggccggaaatcatggggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 33380431  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  33380432 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 35160882 - 35161029
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 124  Q
    ||||||||||||||||||||||||||||||||| |||          |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160882 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 35160981  T
Q  125 attcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160982 attcttgaatttttcttataaaatcattcttgatatctagcattttcc 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 7475448 - 7475303
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||||||||||||| || ||| ||||    
T  7475448 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcat 7475349  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  7475348 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 10662012 - 10662158
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 125  Q
    ||||||||||||||| ||||||||||||||||| |||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10662012 ctggccggaaatcatagggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtca 10662111  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10662112 ttcttgaatttttcttataaaatcattcttgatatctagcattttcc 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 3989193 - 3989342
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||| |||||||||     
T  3989193 atctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttattattgtgt 3989292  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcatt 168  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  3989293 catgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 9293516 - 9293370
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 125  Q
    ||||||||||||||||||||||||||||||||| ||          |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  9293516 ctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtca 9293417  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  9293416 ttcttgaatctttcttataaaatcattcttgatatctagcattttcc 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 27 - 175
Target Start/End: Original strand, 13354972 - 13355121
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 125  Q
    ||||||||||||||||| ||||||||||||||| ||          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13354972 ctggccggaaatcatggagtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtca 13355071  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcattttccttt 175  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  13355072 ttcttggatctttcttataaaatcattcttgatatctagcattttccttt 13355121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 31174782 - 31174633
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||         ||||||||||||||||||||| ||||||||||||| | ||||||||     
T  31174782 atctcagtctgaccggaaatcatggggtggtgggtgttatgtat-ttttttttatgaaagattaataaatgagattgaaatctaaaggagtttattgtgt 31174684  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 169  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31174683 catgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 43331092 - 43331183
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||   |||||||||||||||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 43331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 21936207 - 21936311
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| ||         ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21936207 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcat 21936306  T
Q  127 tcttg 131  Q
    |||||    
T  21936307 tcttg 21936311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 176
Target Start/End: Original strand, 22592880 - 22592987
Alignment:
Q  72 atgaaagattaataaatgagactgaaa--tctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    ||||||| ||||||||| |||||||||  ||||| ||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  169 ttcctttt 176  Q
    ||||||||    
T  22592980 ttcctttt 22592987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 170  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||||||||| |||||||   ||||||||||||||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaa-ttttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 9723586 - 9723677
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 172  Q
    ||||||| ||||||||||||||||||||||||| || |||||||||||| ||| |||||| || ||||||||||||||||||| ||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 34321042 - 34320961
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttga-----------aaaatcattcttgatatctagcattttcctt 34320961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 16767357 - 16767288
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 141  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||| ||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 14941354 - 14941427
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||| |||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 9293564 - 9293637
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 10661964 - 10661891
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 10661891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 21936158 - 21936085
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 23268050 - 23268123
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 35160834 - 35160761
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 35160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 39819272 - 39819317
Alignment:
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttcc 39819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 43330989 - 43330916
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||||||||||| || | |||||| |||||||||| |||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcat 151  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||| || ||| |||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 14941259 - 14941199
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttga 132  Q
    ||||||| ||||||||| ||| |||||||||| | ||||||||||| ||||||||||||||    
T  14941259 atgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 7475496 - 7475569
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |  ||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 7475569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 13354923 - 13354858
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| ||| |||||| |||||| ||||||||||| ||||||| |||||||| ||||||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 21393676 - 21393749
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| | ||||||||||||| |||||||||| | |||||  |||||||||| |||||||    
T  21393676 aaatctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcatt 21393749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 33380284 - 33380211
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| ||||||||||  |||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  33380284 aaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33380211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  97 aatctaaaggtgattattgtgccatgtcattcttgaatttttctta 142  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 16767420 - 16767380
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||| |||||||||||||||| |||||||||||||||||    
T  16767420 atctcagtctggccggaaatcatagggtggtgggtgttatg 16767380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 59
Target Start/End: Complemental strand, 21393626 - 21393596
Alignment:
Q  29 ggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||||||||||||||||||||||||||||    
T  21393626 ggccggaaatcatggggtggtgggtgttatg 21393596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 59
Target Start/End: Original strand, 43331039 - 43331069
Alignment:
Q  29 ggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||||||||||||||||||||||||||||    
T  43331039 ggccggaaatcatggggtggtgggtgttatg 43331069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 3989153 - 3989108
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 141  Q
    |||||||| |||||||||| ||||||||||||||| || |||||||    
T  3989153 aaatctaagggtgattattctgccatgtcattcttaaaattttctt 3989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 9723482 - 9723409
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||| ||| |||||||||| || |||||||||||| ||| |||||| |||||||| ||||| |||| |||||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcatt 9723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 22591547 - 22591494
Alignment:
Q  108 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    ||||||| |||||| |||||||||||||||| || |||||||| ||||||||||    
T  22591547 gattattctgccatatcattcttgaattttttttaataaaatctttcttgatat 22591494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 59
Target Start/End: Original strand, 9723534 - 9723562
Alignment:
Q  31 ccggaaatcatggggtggtgggtgttatg 59  Q
    |||||||||||||||||||||||||||||    
T  9723534 ccggaaatcatggggtggtgggtgttatg 9723562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 27847801 - 27847833
Alignment:
Q  142 ataaaatcattcttgatatctagcattttcctt 174  Q
    ||||||| |||||||||||||||||||||||||    
T  27847801 ataaaattattcttgatatctagcattttcctt 27847833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 4e-59; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 3137354 - 3137207
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||| ||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3137354 ctggccggaaatcatggggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 3137255  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3137254 tcttgaatttttcttataaaatcattcttgatatctagcattttcctt 3137207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 37522170 - 37522323
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    ||||||| |||||||||||| |||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||||||||||||| |||    
T  37522170 atctcaacctggccggaaattatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgc 37522269  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37522270 catgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 22426285 - 22426136
Alignment:
Q  26 tctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 125  Q
    |||||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22426285 tctggccggaaatcatggggtggtgggtgttatgtat-ttttttttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtca 22426187  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 176  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22426186 ttcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 22426136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 34482823 - 34482681
Alignment:
Q  32 cggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 131  Q
    ||||||||||||| |||||||| ||||| |||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34482823 cggaaatcatgggatggtgggtattatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 34482724  T
Q  132 aatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34482723 aatttttcttataaaatcattcttgatatctagcattttcctt 34482681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 3456181 - 3456336
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||| |||||| ||||     
T  3456181 atctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgattagtgtgt 3456280  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3456281 catgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 3456336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 33113917 - 33114068
Alignment:
Q  26 tctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 124  Q
    |||||||||||||||||||||||||||||||||| ||          ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33113917 tctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtc 33114016  T
Q  125 attcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 176  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33114017 attcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 33114068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 30385526 - 30385670
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30385526 ctggccggaaatcatggggtggtgggtgttatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 30385624  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||    
T  30385625 tcttgaatctttcttataaaatcattcttgatatttagcattttcc 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 3574465 - 3574321
Alignment:
Q  28 tggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 127  Q
    |||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  3574465 tggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcatt 3574366  T
Q  128 cttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||| || |||||||||||||||||||||||||||||||||||||    
T  3574365 cttggatctttcttataaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 19650838 - 19650695
Alignment:
Q  28 tggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 127  Q
    |||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19650838 tggccggaaatcatggggtggtgggtgttatgtat-ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcatt 19650740  T
Q  128 cttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||| || |||||||||||||||||||||||||||||||||||||    
T  19650739 cttggatctttcttataaaatcattcttgatatctagcattttcc 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 174
Target Start/End: Complemental strand, 37216985 - 37216846
Alignment:
Q  35 aaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 134  Q
    ||||||| ||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37216985 aaatcatagggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaat 37216886  T
Q  135 ttttcttataaaatcattcttgatatctagcattttcctt 174  Q
     |||||||||||||||||||||||||||||||||||||||    
T  37216885 ctttcttataaaatcattcttgatatctagcattttcctt 37216846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 8320477 - 8320378
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 6042047 - 6042149
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  6042047 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 6042146  T
Q  172 ctt 174  Q
    |||    
T  6042147 ctt 6042149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 3089589 - 3089689
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  3089589 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 3089688  T
Q  172 c 172  Q
    |    
T  3089689 c 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 2754889 - 2754989
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  2754889 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttc 2754988  T
Q  172 c 172  Q
    |    
T  2754989 c 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 48161076 - 48161178
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  48161076 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttc 48161175  T
Q  172 ctt 174  Q
    |||    
T  48161176 ctt 48161178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 33145882 - 33145980
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 170  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33145882 atgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 36864969 - 36864824
Alignment:
Q  29 ggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattc 128  Q
    |||||||||||||||| |||||||||||||| ||         ||||||  |||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  36864969 ggccggaaatcatgggatggtgggtgttatgtat--tttttatatgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattc 36864872  T
Q  129 ttgaat-ttttcttataaaatcattcttgatatctagcattttccttt 175  Q
    |||||| |||| | ||||||||||||||||||||||||||||||||||    
T  36864871 ttgaatcttttttgataaaatcattcttgatatctagcattttccttt 36864824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 47738281 - 47738382
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 170  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  171 cc 172  Q
    ||    
T  47738381 cc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 26612916 - 26613017
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 170  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||| |||||||||| ||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  171 cc 172  Q
    ||    
T  26613016 cc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 40328011 - 40328104
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 174  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcctt 40328104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 8361924 - 8361832
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcctt 8361832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 42921295 - 42921399
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 170  Q
    ||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T
Q  171 ccttt 175  Q
     ||||    
T  42921395 tcttt 42921399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 41224414 - 41224505
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcct 41224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 72 - 160
Target Start/End: Original strand, 33839705 - 33839794
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 171
Target Start/End: Original strand, 46919064 - 46919164
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 170  Q
    |||| |||||||||||| |||| |||||||| ||||||||||| |||||||||||| |||||| |||| | |||||||||||||||||||||| ||||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatttt 46919163  T
Q  171 c 171  Q
    |    
T  46919164 c 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 24343720 - 24343820
Alignment:
Q  73 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||| ||||||||| |||||||||||||| |||||||||  |  |||||||||||||||| |||| | |||||||||||||||||||||| |||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T
Q  172 c 172  Q
    |    
T  24343820 c 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 42297981 - 42298122
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||||||||||||||||||||||| | ||||||| ||         ||||||| |||||||||||||||||||||||| |||| ||||||||     
T  42297981 atctcagtctggccggaaatcatggggtggtagatgttatgtat--tttttttatgaaaggttaataaatgagactgaaatctaagggtggttattgtgt 42298078  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||||||          ||||||||||||||||||| |||||||||||    
T  42298079 catgtcattcttg----------ataaaatcattcttgatatttagcattttcc 42298122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 2754794 - 2754721
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 3137402 - 3137475
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 3574515 - 3574588
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 6041961 - 6041888
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| | |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 33145789 - 33145717
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || |||| | |||||||| |||||||||| |||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatatatagcatt 33145717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 41883106 - 41883031
Alignment:
Q  83 ataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttga 157  Q
    |||||| ||||||||||| |||| |||||||| | ||||||||||||||||| |||||| ||||||||||| ||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 141  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 11347345 - 11347272
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| ||| |||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11347272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 37217041 - 37217114
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||| ||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  37217041 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 37217114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||||||| |||||| |||||| |||||||||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 19650888 - 19650953
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||| ||||    
T  19650888 aaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatat 19650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 30385088 - 30385015
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||| ||| |||||||||| |||||||||||| ||||| ||||||| |||||||| |||||||||  |||||||    
T  30385088 aaatataagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcatt 30385015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 34482898 - 34482971
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| | |||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  34482898 aaatctaagggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 34482971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 41883211 - 41883256
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 141  Q
    |||| ||| |||||||||| ||||||||||||||||||||||||||    
T  41883211 aaatttaagggtgattattctgccatgtcattcttgaatttttctt 41883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 30385136 - 30385168
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||||||||||||||||||||||||||||||    
T  30385136 ctggccggaaatcatggggtggtgggtgttatg 30385168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 33839648 - 33839688
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatg 59  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  33839648 atctcaatctggccgtaaatcatggggtggtaggtgttatg 33839688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 40327942 - 40327982
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatg 59  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  40327942 atctcaacctggccggaaatcatagggtggtgggtgttatg 40327982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 11347439 - 11347476
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtga 109  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  11347439 atgaaaaattaataaatgagattgaaatctaaaggtga 11347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 22426332 - 22426397
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||||||||| || || ||||||| |||||||| ||||| ||||    
T  22426332 aaatctaagggtgattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatat 22426397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 26612862 - 26612797
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatat 160  Q
    |||||||||  || ||||| ||||||||||||||||||| |||| |||||||||| || |||||||    
T  26612862 aaatctaaaaatggttattctgccatgtcattcttgaatttttttttataaaatcttttttgatat 26612797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 3e-56; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 173
Target Start/End: Complemental strand, 48880867 - 48880721
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  48880867 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcat 48880768  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  48880767 tcttgaatttttcttataaaatcattcttgatatctagcattttcct 48880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 24395089 - 24395241
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  24395089 atctcaacctggccggaaatcatggggtggtgggtgttatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 24395187  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  24395188 catgtcattcttgaatcttttttataaaatcattcttgatatctagcattttcc 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 30848686 - 30848839
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| ||||||||||||||||||| | |||||||||||| |||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  30848686 atctcagtctggccggaaatcatgggatagtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgc 30848785  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30848786 catgtcattcttgaatttttcttataaaagcattcttgatatctagcattttcc 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 28 - 174
Target Start/End: Original strand, 3962105 - 3962250
Alignment:
Q  28 tggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 127  Q
    |||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3962105 tggccggaaatcatggggtggtgggtgttatgtat-ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 3962203  T
Q  128 cttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    |||| || |||||||||||||||||||||||||||||||||||||||    
T  3962204 cttggatatttcttataaaatcattcttgatatctagcattttcctt 3962250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 45637829 - 45637982
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||||||||||||||||||||||||| ||||||| ||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  45637829 atctcagtctggccggaaatcatggggtggtggatgttatgtat-ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 45637927  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  45637928 catgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcct 45637982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 26 - 173
Target Start/End: Original strand, 42611935 - 42612082
Alignment:
Q  26 tctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 125  Q
    |||| ||||||||||||||||||||||||||||| ||         ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42611935 tctgaccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtca 42612034  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    |||||  || ||||||||||||||||||||||||||||||||||||||    
T  42612035 ttcttagatctttcttataaaatcattcttgatatctagcattttcct 42612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 25167798 - 25167651
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| |||||||||||||||||||||| ||||||||||| |||        ||||||||||      |||||||||||||||||||||||||||||||    
T  25167798 atctcagtctggccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagatt------tgagactgaaatctaaaggtgattattgtgc 25167705  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25167704 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 35445567 - 35445668
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  172 ct 173  Q
    ||    
T  35445667 ct 35445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 72 - 176
Target Start/End: Original strand, 15329444 - 15329548
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttc 15329543  T
Q  172 ctttt 176  Q
    |||||    
T  15329544 ctttt 15329548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 4974683 - 4974532
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| | ||||||||||||||| |||||||||||||||| ||         ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  4974683 atctcagtttggccggaaatcatgaggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgc 4974584  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 170  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  4974583 catgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 15577798 - 15577638
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn---atgaaagattaataaatgagactgaaatctaaaggtgattattg 115  Q
    |||||| ||||||||||||||||||| |||||||||||||| ||            || |||||||||||||||||||||||||||||||||||||||||    
T  15577798 atctcagtctggccggaaatcatgggttggtgggtgttatgtatttttttttttttataaaagattaataaatgagactgaaatctaaaggtgattattg 15577699  T
Q  116 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 176  Q
    || ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  15577698 tgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcctttt 15577638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 34483008 - 34483108
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 34483107  T
Q  172 c 172  Q
    |    
T  34483108 c 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 35876414 - 35876514
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  172 c 172  Q
    |    
T  35876514 c 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 42696200 - 42696355
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    ||||||| |||||||||||||| |||||||||| ||||||| ||         ||||||  |||||||||||||||||||||||| |||||||||||| |    
T  42696200 atctcaacctggccggaaatcaaggggtggtggatgttatgtattttttttttatgaaaagttaataaatgagactgaaatctaagggtgattattgtac 42696299  T
Q  119 catgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 173  Q
    |||||||||||||||||||| || ||||||||||| |||||||||| |||||||||    
T  42696300 catgtcattcttgaattttttttgataaaatcattattgatatctaacattttcct 42696355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 37477018 - 37476876
Alignment:
Q  29 ggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattc 128  Q
    ||||||||||||||||||||||||||||||| ||          |  || || |||||||||||||||||||||| |||||||||||||||||||||||     
T  37477018 ggccggaaatcatggggtggtgggtgttatgtattttttttctgtataaaatgaataaatgagactgaaatctaagggtgattattgtgccatgtcatta 37476919  T
Q  129 ttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    || ||| ||||||   |||||||||||||||||||||||||||    
T  37476918 ttaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 29737314 - 29737406
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 163  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||| ||| |||||| ||||||||||||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 18037157 - 18037250
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccttt 175  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||| ||| ||||||   |||||||| ||||||||||||||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttccttt 18037250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 15238564 - 15238655
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 173  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||| ||   |||||||||||||||||||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 15238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 20009991 - 20009895
Alignment:
Q  75 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 170  Q
    |||| ||||||||||||||| ||||||||   ||||||||||| |||||||||||||||| |||| | |||||||||||| ||||||||| ||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 4974723 - 4974796
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 42611888 - 42611815
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 45637789 - 45637716
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 15577841 - 15577911
Alignment:
Q  99 tctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    ||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 15329350 - 15329277
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 34482912 - 34482839
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcatt 34482839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 48880915 - 48880988
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 141  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 24395049 - 24394976
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    ||||||||||||  ||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  24395049 aaatctaaaggttgttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 24394976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 35444635 - 35444562
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| ||||| |||| |||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcatt 35444562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 37477079 - 37477141
Alignment:
Q  107 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| ||||||||||||||| |||||||||| | |||||| |||||||||| |||||||    
T  37477079 tgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcatt 37477141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 40880706 - 40880641
Alignment:
Q  106 gtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||||||||||| ||| || ||| ||||  || ||||||||||||||||||||||||||||    
T  40880706 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 40880641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 3962056 - 3961983
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||| ||| |||||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3962056 aaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 18037055 - 18036990
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 160  Q
    |||| ||| |||||||||| ||||||||||||||| |||||||||| | |||||| ||||||||||    
T  18037055 aaatttaagggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatat 18036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 25167838 - 25167911
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  25167838 aaatctaaggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 25167911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 29737216 - 29737143
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| | ||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  29737216 aaatctaagggtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 36790336 - 36790271
Alignment:
Q  108 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||| |||||||||||||||| ||| || |||||| |||| ||||||| |||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcc 36790271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 36790454 - 36790527
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||| ||| ||| |||||| ||||||||||||||| |||||||||| |||||| | |||||||||| |||||||    
T  36790454 aaatttaagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcatt 36790527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 15238509 - 15238538
Alignment:
Q  29 ggccggaaatcatggggtggtgggtgttat 58  Q
    ||||||||||||||||||||||||||||||    
T  15238509 ggccggaaatcatggggtggtgggtgttat 15238538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 34482952 - 34482991
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatg 59  Q
    |||||| |||||||||||||||| |||||||||||||||||    
T  34482952 atctcagtctggccggaaatcat-gggtggtgggtgttatg 34482991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 106; Significance: 3e-53; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 4521 - 4666
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||| ||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4521 ctggccgaaaatcatggggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcat 4620  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  4621 tcttaaatttttcttataaaatcattcttgatatctagcattttcc 4666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 4473 - 4400
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 3e-53; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 17175961 - 17175816
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17175961 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcat 17175862  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  17175861 tcttgaatctttcttataaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 30 - 174
Target Start/End: Original strand, 32702333 - 32702477
Alignment:
Q  30 gccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 129  Q
    |||||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  32702333 gccggaaatcatggggtggtgggtcttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattct 32702432  T
Q  130 tgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32702433 tgaatttttcttataaaatcattcttgatatctagcattttcctt 32702477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 33696821 - 33696969
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgca-tcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 125  Q
    ||||||||||||||||||||||||||||||||| | |         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33696821 ctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 33696920  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  33696921 ttcttaaatctttcttataaaatcattcttgatatctagcattttcctt 33696969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 28675273 - 28675420
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    |||||||||||||||||||||||||| |||||| ||         ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  28675273 ctggccggaaatcatggggtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcat 28675372  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcctt 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  28675373 tcttgaatctttcttataaaatcattcttgatatctagcattttcctt 28675420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 18365513 - 18365369
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    |||||||||||||||||||| |||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18365513 ctggccggaaatcatggggtagtgggtgttatgtat-ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcat 18365415  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  18365414 tcttggatctttcttataaaatcattcttgatatctagcattttcc 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 18370777 - 18370633
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    |||||||||||||||||||| |||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18370777 ctggccggaaatcatggggtagtgggtgttatgtat-ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcat 18370679  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  18370678 tcttggatctttcttataaaatcattcttgatatctagcattttcc 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 17705413 - 17705260
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 118  Q
    |||||| ||||||||||||||||||| |||||||||||||| |          ||||||| |||||||||||||||||||||||| |||||||||||||     
T  17705413 atctcagtctggccggaaatcatgggatggtgggtgttatgta---attttttatgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgt 17705318  T
Q  119 catgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 176  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17705317 catgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 17705260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 33695267 - 33695121
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgca-tcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 125  Q
    ||||||||||||||||||||||||||||||||| | |         |||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  33695267 ctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatca 33695168  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||    
T  33695167 ttcttaaatatttcttataaaatcattcttgatatctagcattttcc 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 2309362 - 2309218
Alignment:
Q  28 tggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 127  Q
    ||||||||||||||||||| |||||||||||| ||         ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  2309362 tggccggaaatcatggggttgtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcatt 2309263  T
Q  128 cttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||    
T  2309262 cttgaatctttcttataaaatcatcgttgatatctagcattttcc 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 23290976 - 23290874
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  23290976 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttc 23290877  T
Q  172 ctt 174  Q
    |||    
T  23290876 ctt 23290874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 6031681 - 6031537
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 125  Q
    ||||||||||||||||||||||||||||||||| ||          || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6031681 ctggccggaaatcatggggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 6031582  T
Q  126 ttcttgaatttttcttataaaatcattcttgatatctagcatttt 170  Q
    ||||| ||| ||| |||||||||||||||||||||| || |||||    
T  6031581 ttcttaaatcttttttataaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  82 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 170  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||   ||||||||||||||||||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 134
Target Start/End: Complemental strand, 18889580 - 18889477
Alignment:
Q  30 gccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 129  Q
    |||||||||||||||||||||||| ||||| ||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18889580 gccggaaatcatggggtggtgggttttatgtat-ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 18889482  T
Q  130 tgaat 134  Q
    |||||    
T  18889481 tgaat 18889477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 29693615 - 29693718
Alignment:
Q  72 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 170  Q
    |||||||  |||||||| |||||||||||||| ||| |||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  171 cctt 174  Q
    ||||    
T  29693715 cctt 29693718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 6127402 - 6127506
Alignment:
Q  28 tggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||| |||||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6127402 tggccagaaatcatggggtggtgggtgttatgtatttttttttatatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcat 6127501  T
Q  127 tcttg 131  Q
    |||||    
T  6127502 tcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 33695315 - 33695388
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 33696773 - 33696700
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  106 gtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 171  Q
    |||||||||||| |||||||||||||||| ||  | ||||||||||||||||||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 582602 - 582522
Alignment:
Q  94 tgaaatctaaaggtgattattgtgcc-atgtcattcttgaatttttctta-taaaatcattcttgatatctagcattttcc 172  Q
    |||||||||| |||||||||| |||| || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 25987047 - 25987126
Alignment:
Q  19 atctcaatctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaa 98  Q
    |||||| |||||||||||||||||||||||||||||||||| |||        ||||||||||| |||||||||||||||    
T  25987047 atctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattagtaaatgagactgaaa 25987126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 6127352 - 6127279
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 6127279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 23291072 - 23291145
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 23291145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 11548576 - 11548647
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagca 166  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| | |||||  |||||||||| |||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 25986997 - 25986934
Alignment:
Q  106 gtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  25986997 gtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 25986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 17176009 - 17176082
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| || ||||||||||||||| |||| || |||||||| |||||||||| |||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 17705453 - 17705526
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 18365561 - 18365634
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 168  Q
    |||| ||| |||||||||| |||||||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 18370825 - 18370898
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 168  Q
    |||| ||| |||||||||| |||||||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18370898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 28675225 - 28675152
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| ||||||||||  | ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 18889685 - 18889757
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatt 168  Q
    |||||||| ||| |||||| |||||||||||||||||| |||||||   ||||| |||||||||| |||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgataaatctttcttgatatatagcatt 18889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 2121059 - 2121004
Alignment:
Q  118 ccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||||| ||||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 9752185 - 9752109
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaa 104  Q
    ||||||||||||||||||||| ||||||||||| ||         ||||||| |||||||||||||||||||||||||    
T  9752185 ctggccggaaatcatggggtgatgggtgttatgtat-ttttttttatgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 9752233 - 9752278
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 141  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttctt 9752278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 8515723 - 8515786
Alignment:
Q  106 gtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    ||||||||| ||||||||||||||| ||| | |||| |||||||| |||||||||| |||||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcatt 8515786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 32702282 - 32702217
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttc-ttataaaatcattcttgatat 160  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||| | | |||||| ||||||||||    
T  32702282 aaatctaagggtgattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatat 32702217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 29693563 - 29693595
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatg 59  Q
    ||||||||||||||||||||||||| |||||||    
T  29693563 ctggccggaaatcatggggtggtggatgttatg 29693595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 12967 - 13110
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  12967 ctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcat 13066  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcatttt 170  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  13067 tcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 12919 - 12846
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 12846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 11746 - 11891
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||| |||||||||||||||| |||||||| ||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11746 ctggccgaaaatcatggggtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 11845  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||    
T  11846 tcttaaatttttcttataaaatcattcttgatatctaacattttcc 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 11698 - 11625
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 47975 - 48119
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  47975 ctggccggaaatcatggggtggtgggtgttatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcat 48073  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  48074 tcttgaatctttcttataaaatcattcttgatatctagcattttcc 48119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 47927 - 47854
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||  |||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 41136 - 41280
Alignment:
Q  27 ctggccggaaatcatggggtggtgggtgttatgcatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 126  Q
    ||||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  41136 ctggccggaaatcatggggtggtgggtgttatgtat-ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcat 41234  T
Q  127 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  41235 tcttggatctttcttataaaatcattcttgatatctagcattttcc 41280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 41088 - 41015
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| |||||||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 3145 - 3072
Alignment:
Q  96 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 168  Q
    |||||||| |||||||||| ||||||||||||||| || |||| || |||||||| |||||||||| |||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 85577 - 85642
Alignment:
Q  106 gtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 172  Q
    |||||||||||||||||| ||| || ||| ||||  || ||||||||||||||||||||||||||||    
T  85577 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 85642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University