View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14351_low_1 (Length: 794)

Name: NF14351_low_1
Description: NF14351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14351_low_1
NF14351_low_1
[»] chr5 (26 HSPs)
chr5 (443-774)||(9884153-9884483)
chr5 (396-719)||(9887161-9887488)
chr5 (48-290)||(9883765-9884006)
chr5 (563-774)||(6140925-6141144)
chr5 (339-450)||(9884007-9884118)
chr5 (463-615)||(9886989-9887140)
chr5 (182-365)||(9867706-9867888)
chr5 (48-130)||(19044034-19044116)
chr5 (693-774)||(9886892-9886978)
chr5 (48-139)||(1974454-1974545)
chr5 (58-139)||(40017051-40017132)
chr5 (48-120)||(25898794-25898866)
chr5 (48-140)||(36310544-36310635)
chr5 (48-138)||(41758570-41758661)
chr5 (58-139)||(3461281-3461363)
chr5 (60-138)||(28784628-28784706)
chr5 (53-130)||(11125646-11125723)
chr5 (58-138)||(7083836-7083916)
chr5 (60-139)||(22706474-22706553)
chr5 (48-130)||(10532919-10533001)
chr5 (58-139)||(6427420-6427501)
chr5 (60-130)||(16101023-16101093)
chr5 (48-85)||(10399135-10399172)
chr5 (60-139)||(2599938-2600016)
chr5 (48-90)||(20202540-20202582)
chr5 (58-139)||(4846712-4846793)
[»] chr4 (24 HSPs)
chr4 (48-139)||(13867663-13867754)
chr4 (51-144)||(14990170-14990262)
chr4 (48-136)||(372815-372902)
chr4 (48-139)||(13855941-13856032)
chr4 (48-144)||(18414033-18414131)
chr4 (48-130)||(40221093-40221175)
chr4 (48-138)||(31936181-31936272)
chr4 (58-139)||(47043687-47043768)
chr4 (22-139)||(40962521-40962640)
chr4 (48-130)||(2778102-2778184)
chr4 (48-130)||(49261640-49261722)
chr4 (58-139)||(886897-886978)
chr4 (58-130)||(32935833-32935905)
chr4 (56-144)||(31823141-31823230)
chr4 (58-139)||(49065414-49065495)
chr4 (48-139)||(24608012-24608103)
chr4 (60-139)||(46814151-46814229)
chr4 (48-130)||(53266079-53266161)
chr4 (66-139)||(28796919-28796992)
chr4 (59-139)||(14329123-14329203)
chr4 (48-135)||(33163129-33163216)
chr4 (59-130)||(36174278-36174349)
chr4 (48-138)||(38131576-38131667)
chr4 (60-138)||(46567399-46567478)
[»] chr7 (16 HSPs)
chr7 (48-144)||(2913164-2913262)
chr7 (48-144)||(8725774-8725871)
chr7 (60-139)||(37524026-37524105)
chr7 (58-139)||(1536944-1537025)
chr7 (58-139)||(34354281-34354362)
chr7 (48-130)||(41219233-41219315)
chr7 (48-139)||(31825916-31826007)
chr7 (61-138)||(29714438-29714515)
chr7 (48-139)||(48219572-48219663)
chr7 (48-139)||(26501000-26501091)
chr7 (48-139)||(26591622-26591713)
chr7 (57-134)||(21613166-21613243)
chr7 (60-139)||(3746641-3746721)
chr7 (48-107)||(21153926-21153985)
chr7 (53-139)||(20377790-20377876)
chr7 (58-103)||(48218491-48218536)
[»] chr3 (19 HSPs)
chr3 (48-144)||(25886163-25886261)
chr3 (57-140)||(25744996-25745079)
chr3 (158-271)||(1520705-1520818)
chr3 (58-139)||(42947663-42947744)
chr3 (58-139)||(53824590-53824671)
chr3 (272-339)||(1520541-1520608)
chr3 (48-138)||(39415483-39415574)
chr3 (58-139)||(35485543-35485625)
chr3 (48-130)||(48086989-48087071)
chr3 (53-138)||(32211263-32211345)
chr3 (87-144)||(50561576-50561633)
chr3 (48-139)||(6755573-6755664)
chr3 (67-139)||(2325319-2325391)
chr3 (58-138)||(16967681-16967761)
chr3 (48-138)||(25574964-25575055)
chr3 (48-135)||(42384421-42384508)
chr3 (48-130)||(8628577-8628659)
chr3 (205-251)||(49047566-49047612)
chr3 (48-118)||(53825748-53825818)
[»] chr1 (25 HSPs)
chr1 (48-144)||(23602812-23602910)
chr1 (48-130)||(41871879-41871961)
chr1 (48-138)||(49597330-49597420)
chr1 (58-139)||(30308484-30308565)
chr1 (58-139)||(47485687-47485768)
chr1 (48-139)||(5767461-5767552)
chr1 (48-139)||(45690465-45690557)
chr1 (46-129)||(3660033-3660116)
chr1 (48-138)||(9343614-9343705)
chr1 (48-139)||(27034184-27034275)
chr1 (48-130)||(48566904-48566986)
chr1 (58-139)||(27033068-27033149)
chr1 (58-139)||(39222840-39222921)
chr1 (58-130)||(21483053-21483125)
chr1 (48-139)||(26013537-26013629)
chr1 (58-138)||(46923917-46923997)
chr1 (58-130)||(50065771-50065843)
chr1 (290-376)||(2912309-2912395)
chr1 (182-271)||(2912510-2912599)
chr1 (48-85)||(3782092-3782129)
chr1 (51-139)||(5766683-5766772)
chr1 (58-139)||(18171832-18171913)
chr1 (48-144)||(11012268-11012366)
chr1 (48-139)||(50066958-50067048)
chr1 (58-131)||(47983818-47983891)
[»] chr2 (9 HSPs)
chr2 (59-139)||(8556375-8556455)
chr2 (48-144)||(13785176-13785273)
chr2 (48-144)||(25685911-25686008)
chr2 (48-138)||(24937255-24937346)
chr2 (58-139)||(29132502-29132584)
chr2 (60-139)||(12967518-12967597)
chr2 (48-85)||(20149455-20149492)
chr2 (58-139)||(22495772-22495853)
chr2 (48-129)||(16710104-16710185)
[»] chr8 (10 HSPs)
chr8 (53-144)||(43835187-43835279)
chr8 (58-139)||(28704141-28704222)
chr8 (48-130)||(34471450-34471532)
chr8 (58-135)||(43635411-43635488)
chr8 (48-139)||(43636475-43636566)
chr8 (58-139)||(23542610-23542691)
chr8 (58-130)||(4639915-4639987)
chr8 (75-138)||(10829626-10829689)
chr8 (48-139)||(1931485-1931578)
chr8 (48-85)||(3964185-3964222)
[»] scaffold0223 (1 HSPs)
scaffold0223 (48-130)||(15938-16020)
[»] scaffold0861 (1 HSPs)
scaffold0861 (58-139)||(3578-3658)
[»] chr6 (7 HSPs)
chr6 (58-139)||(16444565-16444646)
chr6 (58-139)||(35053605-35053686)
chr6 (48-139)||(13312728-13312819)
chr6 (58-139)||(14153652-14153733)
chr6 (59-139)||(9400159-9400239)
chr6 (48-130)||(11718507-11718589)
chr6 (59-139)||(14830690-14830770)
[»] scaffold1700 (1 HSPs)
scaffold1700 (48-139)||(985-1076)
[»] scaffold1455 (1 HSPs)
scaffold1455 (61-102)||(75-116)


Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 443 - 774
Target Start/End: Original strand, 9884153 - 9884483
Alignment:
Q  443 atatatatcaagcaaatcagagaataatccaactgcacaacttttcgattcgggaaatcgcatagtgataaattgacatgtttttgtggcagagttgtga 542  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||   |||||||||| ||||||||||||||||||| |||| |||    
T  9884153 atatatatcaagcaaaacagagaataatccaactgcacaactttacgattcgggaaattttatagtgataagttgacatgtttttgtggcaaagttatga 9884252  T
Q  543 ttacccatcttatacaccggtgacaataatgaatcttggatggtattttcacaaacatgttcaacgaaaaagaagtgtactttgagtaatcaatctaaaa 642  Q
    ||||| || |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  9884253 ttaccgattttatacactggtgacaataatgaagcttggatggtattttcacaaacatgttcaatgaaaaagaagtgtactatgagtaatcaatctaaaa 9884352  T
Q  643 cctgcaataaacgtttatttttcatgatatgtgagacccttcctcacgcttatatagcaacaagaaggtatttcaaaattcattacaaagtaaaagatga 742  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9884353 cctgcaataaacgtttatttttcatgaaatgtgagactcttcctcacgcttatatagcaacaagaaggtatttc-aaattcattacaaagtaaaagatga 9884451  T
Q  743 tagaaaatcttttgtaataaaagttatcacat 774  Q
    | ||||| ||||||||||||||||||||||||    
T  9884452 tcgaaaaacttttgtaataaaagttatcacat 9884483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 396 - 719
Target Start/End: Complemental strand, 9887488 - 9887161
Alignment:
Q  396 gtgatttctgaatttctagcacga-taaacacaatttggttagcaaacatatatat--caagcaaatcagagaataatccaactgcacaacttttcgatt 492  Q
    |||||||||||||||| | ||| | |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||    
T  9887488 gtgatttctgaatttccaacacaaataaacacaatttggttagcaaacatatatatatcaagcaaagcagagaataatccaactgcacaacttttggatt 9887389  T
Q  493 cgggaaatcgcatagtgataaattgacatgtttttgtggcagagttgtgattacccatcttatacaccggtgacaataatgaatcttggatggtattttc 592  Q
     |||||||   ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||||||  |||||||  ||||||    
T  9887388 tgggaaattttatagtgataaattgacatgtttttgtggcagagatgtgattacccatcttatacactagtg-caataatgaagtttggatgagattttc 9887290  T
Q  593 acaaacatgttcaacgaaaaagaagtgtactttgagtaatcaatctaaaacctgcaataaacgtttatttttcatgatatgtgagacccttcctcacgct 692  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||    
T  9887289 acaaacatgttcaacggaaaagaagtgtactatgagtactcaatctaaaacctgaaataaacgtttatttttcatgaaatgtgagactcttcctcacgct 9887190  T
Q  693 ta--tatagcaacaagaaggtatttcaaa 719  Q
    ||  |||| ||||||||||||||||||||    
T  9887189 tatatataacaacaagaaggtatttcaaa 9887161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 48 - 290
Target Start/End: Original strand, 9883765 - 9884006
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaagttgtnnn 147  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  9883765 tgagaaaatggggaagtttggaggggtatttataggtatgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaagttgtaaa 9883864  T
Q  148 nnnnnncgggtagaaggtataggctcatacgacaaggatgatgattatgaagtgtatcttactgatggtgattcaaattcaactgtaactactactgcta 247  Q
          || ||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9883865 aaaaa-cgtgtagaaggtataggctcatacgacaaggatgacaattatgaagtgcatcttactgatggtgattcaaattcaactgtaactactactgcta 9883963  T
Q  248 gaagacctttcaaaaagaaagctcataacacagattcatcacc 290  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9883964 gaagacctttcaaaaagaaagctcataacacagattcatcacc 9884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 563 - 774
Target Start/End: Complemental strand, 6141144 - 6140925
Alignment:
Q  563 tgacaataatgaatcttggatggtattttcacaaacatgttcaacgaaaaagaagtgtactttgagt---aatcaatctaaaacctgcaataaacgttta 659  Q
    ||||||||||||| ||||||||  |||||||||||| |||||||||||||||||||||||  |||||   | |||||| |||||||||||| ||||||||    
T  6141144 tgacaataatgaagcttggatgcgattttcacaaacgtgttcaacgaaaaagaagtgtaccatgagtcgtactcaatcaaaaacctgcaatgaacgttta 6141045  T
Q  660 tttttcatgatatgtgagacccttcctcacgcttatatagcaacaagaaggtatttcaaaat-----tcattacaaagtaaaagatgatagaaaatcttt 754  Q
    |||||||||| ||||||||| |||||||||| ||| |||||||||||||||||||||||| |     ||||  |||||||||| ||||||||||||||||    
T  6141044 tttttcatgaaatgtgagactcttcctcacgattacatagcaacaagaaggtatttcaaattcatcatcatggcaaagtaaaatatgatagaaaatcttt 6140945  T
Q  755 tgtaataaaagttatcacat 774  Q
    ||||| ||||||||||||||    
T  6140944 tgtaacaaaagttatcacat 6140925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 339 - 450
Target Start/End: Original strand, 9884007 - 9884118
Alignment:
Q  339 aagtgagggagattctttcctgcagattttaatgaggtgtggggtcaacctccatgcgtgatttctgaatttctagcacgataaacacaatttggttagc 438  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9884007 aagtcagggagattctttcctgcagattttaatgaggtgtggggtcaacctccatgcgtgatttctgaatttctagcacaataaacacaatttggttagc 9884106  T
Q  439 aaacatatatat 450  Q
    ||||||||||||    
T  9884107 aaacatatatat 9884118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 463 - 615
Target Start/End: Complemental strand, 9887140 - 9886989
Alignment:
Q  463 agaataatccaactgcacaacttttcgattcgggaaatcgcatagtgataaattgacatgtttttgtggcagagttgtgattacccatcttatacaccgg 562  Q
    ||||||||||||||||||||||||| |||| |||||||   ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |    
T  9887140 agaataatccaactgcacaacttttggatttgggaaattttatagtgataaattgacatgtttttgtggcagagatgtgattacccatcttatacactag 9887041  T
Q  563 tgacaataatgaatcttggatggtattttcacaaacatgttcaacgaaaaaga 615  Q
    || ||||||||||  |||||||  |||||||||||||||||||||| ||||||    
T  9887040 tg-caataatgaagtttggatgagattttcacaaacatgttcaacggaaaaga 9886989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 182 - 365
Target Start/End: Complemental strand, 9867888 - 9867706
Alignment:
Q  182 aggatgatgattatgaagtgtatcttactgatggtgattcaaattcaactgtaactactactgctagaagacctttcaaaaagaaagctcataacacaga 281  Q
    |||||||||| ||||||||| |||||| ||||| ||||||||||||||  | || || ||||| ||||||||||| ||||||||||||||||||||||||    
T  9867888 aggatgatgactatgaagtggatcttattgatgatgattcaaattcaataggaa-tattactggtagaagaccttccaaaaagaaagctcataacacaga 9867790  T
Q  282 ttcatcacctttaatggaaggtgatggaagatcactaaaagtgcttagttttactcaaagtgagggagattctttcctgcagat 365  Q
    | || | |||||||| ||| |||||||||||||||||||||||||| ||| |||||||||| ||  || ||||||||| |||||    
T  9867789 tccaccgcctttaatagaatgtgatggaagatcactaaaagtgcttggttatactcaaagtcagacagcttctttccttcagat 9867706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 19044116 - 19044034
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| |||||||| || ||||||    
T  19044116 tgagaaaatggggaagtttggaggggtatttataggtgggaatgataacataggttataaatacaataaatgttgtaaaaaaa 19044034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 693 - 774
Target Start/End: Complemental strand, 9886978 - 9886892
Alignment:
Q  693 tatatagcaacaagaaggtatttcaaaat-----tcattacaaagtaaaagatgatagaaaatcttttgtaataaaagttatcacat 774  Q
    |||||| |||||||||||||||||||| |     |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9886978 tatataacaacaagaaggtatttcaaattcatcatcattacaaagtaaaagatgatagaaaatcttttgtaataaaagatatcacat 9886892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 1974545 - 1974454
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| | ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||| ||||||||||||||||||    
T  1974545 tgagaaattagggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtggtcaaaaaacgtgtaaaa 1974454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 40017051 - 40017132
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||| ||||||||||||||||||    
T  40017051 gggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtggtcaaaaaacgtgtaaaa 40017132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 25898866 - 25898794
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgt 120  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||||  |||||||||||  |||||||||||    
T  25898866 tgagaaaatagggaagtatggaggggtatttataggtgggaatggtagtataggttataaccaccataaatgt 25898794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 36310635 - 36310544
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaag 140  Q
    ||||||||||| |||| |||||||| |||||||||| | ||||||||||||| ||| ||| |||  |||||| ||||||||||||||||||||    
T  36310635 tgagaaaatggtgaaggttggagggatatttatagggg-gaatggtaacataagttttaactacactaaatgcagtcaaaaaacgtgtaaaag 36310544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 41758570 - 41758661
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtc-aaaaaacgtgtaaa 138  Q
    |||| |||| ||||||| |||||||||||||||||||| ||||||||   ||||||||||  ||||||||||| ||| ||||||||||||||    
T  41758570 tgaggaaatagggaagtatggaggggtatttataggtgagaatggtagtgtaggttataaccaccataaatgtggtcaaaaaaacgtgtaaa 41758661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 3461281 - 3461363
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtc-aaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||||||| |||||||||||||||    
T  3461281 gggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtagtcaaaaaaacgtgtaaaa 3461363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 28784628 - 28784706
Alignment:
Q  60 gaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaa 138  Q
    ||||| |||||||||||||||||||| |||| |||| ||| |||||||  |||||||||||  ||||||||||||||||    
T  28784628 gaagtatggaggggtatttataggtgggaatagtaatataagttataacaaccataaatgtgttcaaaaaacgtgtaaa 28784706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 11125646 - 11125723
Alignment:
Q  53 aaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    ||||| |||||||||||||| |||||||||||| ||||| ||  ||||| ||||| |||||||| |||||||||||||    
T  11125646 aaatgaggaagtttggagggatatttataggtgggaatgatagtataggatataactaccataagtgtagtcaaaaaa 11125723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 138
Target Start/End: Original strand, 7083836 - 7083916
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaa 138  Q
    ||||||| ||||||| |||||||||||| ||||||||  ||||||| ||| || ||| ||||| |||||||||||||||||    
T  7083836 gggaagtatggagggatatttataggtgggaatggtagtataggttgtaaatatcattaatgtggtcaaaaaacgtgtaaa 7083916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 22706474 - 22706553
Alignment:
Q  60 gaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||| ||||||||||||||  |||  ||||||||| ||||||| ||| |||||| ||||| ||||||||||||||||||    
T  22706474 gaagtatggaggggtatttaagggtaggaatggtaatataggttgtaaataccattaatgtggtcaaaaaacgtgtaaaa 22706553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 10533001 - 10532919
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||| |||| ||||||| ||||||||||||||||||||  |||||||  ||||||||||| |||||| ||||| || ||||||    
T  10533001 tgaggaaatagggaagtatggaggggtatttataggtgaaaatggtagtataggttataaataccattaatgtggtaaaaaaa 10532919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 6427501 - 6427420
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  ||| ||| ||| |||||| |||||  |||||||| ||||||||    
T  6427501 gggaagtatggaggggtatttataggtgggaatggtagtataagttgtaaataccattaatgtgatcaaaaaatgtgtaaaa 6427420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 16101093 - 16101023
Alignment:
Q  60 gaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    ||||| |||||||||||||||||||| |||||  |  ||||||||||| |||| ||||||| |||||||||    
T  16101093 gaagtatggaggggtatttataggtgagaatgacagtataggttataactaccgtaaatgtggtcaaaaaa 16101023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 10399135 - 10399172
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtg 85  Q
    |||| |||||||||||||||||||||||||||||||||    
T  10399135 tgaggaaatggggaagtttggaggggtatttataggtg 10399172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 2600016 - 2599938
Alignment:
Q  60 gaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||||||||||| ||||||||||| | || || ||||||| || |||  ||||| |||| ||||||||||||||||||||    
T  2600016 gaagtttggaggtgtatttataggggggattg-taacatatgtaatatctaccacaaatatagtcaaaaaacgtgtaaaa 2599938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 20202540 - 20202582
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaat 90  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||    
T  20202540 tgagaaaatagggaagtatggaggggtatttataggtgggaat 20202582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 4846712 - 4846793
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| || ||| ||||||||||||| ||||| ||  ||||||  |||  ||||| ||||| ||||||||||||||||||    
T  4846712 gggaagtatgaaggagtatttataggtgggaatgatagtataggtcgtaaacaccattaatgtggtcaaaaaacgtgtaaaa 4846793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 6e-30; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 13867663 - 13867754
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  13867663 tgaggaaatggggaagtttggaggagtatttataggtgggaatggtaacataggttataactacaataaatatagtcaaaaaacgtgtaaaa 13867754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 51 - 144
Target Start/End: Original strand, 14990170 - 14990262
Alignment:
Q  51 gaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaagttgt 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||  |||||||| || ||||||||||||||||||||||||||||||||||||    
T  14990170 gaaaatggggaagtttggaggggtatttataagtgagaatggtagtataggtta-aactaccataaatgtagtcaaaaaacgtgtaaaagttgt 14990262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 372902 - 372815
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgta 136  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| ||| ||||||| ||| ||||||||||||    
T  372902 tgagaaaatggggaagtttggaggggaatttataggtgggaatggtaacatatgttataactacaataaatgcagt-aaaaaacgtgta 372815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 13855941 - 13856032
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| ||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||| ||| || ||| ||||||||||||||||||||    
T  13855941 tgaggaaatgaggaattttggagggatatttataggtgggaatggtaacataggttataactacaattaatatagtcaaaaaacgtgtaaaa 13856032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 18414033 - 18414131
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagt--caaaaaacgtgtaaaagttgt 144  Q
    |||||||||| ||||||||||||| |||| |||||||| ||||| ||||||||||||||| |||||||||||||||   |||||||||||| |||||||    
T  18414033 tgagaaaatgaggaagtttggaggagtatatataggtgggaatgataacataggttataactaccataaatgtagtaaaaaaaaacgtgtagaagttgt 18414131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 40221175 - 40221093
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||| ||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||||    
T  40221175 tgaggaaatgaggaagtttggaggggcatttacaggtgggaatggtaacataggttataaataccataaatgtagtaaaaaaa 40221093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 31936181 - 31936272
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtc-aaaaaacgtgtaaa 138  Q
    |||| |||| ||||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| | | ||||||||||||||    
T  31936181 tgaggaaatagggaagtatggaggggtatttataggtgagaatggtaatataggttataactaccataaatgtggacaaaaaaacgtgtaaa 31936272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 47043687 - 47043768
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||| ||||||||||||||||||    
T  47043687 gggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtggtcaaaaaacgtgtaaaa 47043768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 40962521 - 40962640
Alignment:
Q  22 agatagcgaggaggagaatgagaa--tatgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatg 119  Q
    |||||| |||||||||| |||||   | |||| ||||||||||||||||||| ||||||||| | |   || |||||||||||||||  ||||||||||     
T  40962521 agatagtgaggaggagagtgagatggtgtgaggaaatggggaagtttggaggtgtatttatatgaggagattgtaacataggttatatctaccataaata 40962620  T
Q  120 tagtcaaaaaacgtgtaaaa 139  Q
    ||||||||||| ||||||||    
T  40962621 tagtcaaaaaatgtgtaaaa 40962640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 2778184 - 2778102
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||| |||| ||||||| || |||||||||| |||||| ||||||||  ||||||||||| |||||||||||| |||||||||    
T  2778184 tgaggaaatagggaagtatgaaggggtatttgtaggtgggaatggtagtataggttataactaccataaatgtggtcaaaaaa 2778102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 49261640 - 49261722
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||| ||||| |||||||||||||| |||||||||||| |||| |||||||| ||||| | ||| ||||||||||| ||||||    
T  49261640 tgaggaaatgaggaagtttggagggatatttataggtgggaatagtaacatatgttatgactacaataaatgtagtaaaaaaa 49261722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 886897 - 886978
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  |||| || |||  ||||| ||||| ||||||||||||||||||    
T  886897 gggaagtatggaggggtatttataggtgggaatggtagtatagtttgtaaacaccattaatgtggtcaaaaaacgtgtaaaa 886978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 32935905 - 32935833
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    ||||||| |||||||||||||||||||| ||||||||  |||||||||||  ||||| ||||| |||||||||    
T  32935905 gggaagtatggaggggtatttataggtgggaatggtagtataggttataaacaccattaatgtggtcaaaaaa 32935833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 31823230 - 31823141
Alignment:
Q  56 tggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtc-aaaaaacgtgtaaaagttgt 144  Q
    |||| |||| |||||||||||||||||||| ||||| ||   ||||||||||  ||||||||||| ||| ||||||||||||||| ||||    
T  31823230 tgggaaagtatggaggggtatttataggtgggaatgatagtgtaggttataaccaccataaatgtggtcaaaaaaacgtgtaaaatttgt 31823141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 49065414 - 49065495
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||| ||||||||||||||| ||||||||  ||||||| ||| || ||| ||||| |||||||||| |||||||    
T  49065414 gggaagtatggaagggtatttataggtgggaatggtagtataggttgtaaatatcattaatgtggtcaaaaaacatgtaaaa 49065495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 24608012 - 24608103
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| ||||||| || ||| |||||||||||||||  |   || |||||||||||||||  |||||||||| ||||||||||||||| ||||    
T  24608012 tgaggaaatgggaaaatttagaggggtatttatagagggagattgtaacataggttatatctaccataaatatagtcaaaaaacgtgaaaaa 24608103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 46814229 - 46814151
Alignment:
Q  60 gaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||| ||| ||||||||||||||    
T  46814229 gaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtggtc-aaaaacgtgtaaaa 46814151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 53266161 - 53266079
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    ||||||| | ||||||| || ||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||| |||||||||    
T  53266161 tgagaaattagggaagtatgaaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtggtcaaaaaa 53266079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 28796992 - 28796919
Alignment:
Q  66 tggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||||||||||||||||  |||||||  ||||||| |||  ||||| ||||| ||||||||| ||||||||    
T  28796992 tggaggggtatttataggtggaaatggtagtataggttgtaaacaccattaatgtggtcaaaaaatgtgtaaaa 28796919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 14329203 - 14329123
Alignment:
Q  59 ggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||||| | |||||||||||||||||| ||||||||  ||  ||| |||  ||||| ||||| ||||||||||||||||||    
T  14329203 ggaagtatagaggggtatttataggtgggaatggtagtatgagttgtaaacaccattaatgtggtcaaaaaacgtgtaaaa 14329123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 33163216 - 33163129
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgt 135  Q
    |||| |||||||||||||| |||| ||||||||||| |   || |||||||||||||||  |||||||| |   ||||||||||||||    
T  33163216 tgaggaaatggggaagtttagaggtgtatttatagggggagattgtaacataggttatatctaccataagtagggtcaaaaaacgtgt 33163129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 36174278 - 36174349
Alignment:
Q  59 ggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| |||||| | ||||||    
T  36174278 ggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtaataaaaaaa 36174349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 38131667 - 38131576
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtc-aaaaaacgtgtaaa 138  Q
    ||||||||| || |||| |||||| |||||||||||||  |||| ||   ||||||||||  ||||||||||| ||| ||||||||||||||    
T  38131667 tgagaaaataggtaagtatggaggagtatttataggtggaaatgatagtgtaggttataaccaccataaatgtggtcaaaaaaacgtgtaaa 38131576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 46567478 - 46567399
Alignment:
Q  60 gaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtc-aaaaaacgtgtaaa 138  Q
    ||||| |||||||||||||||| |||  |||||||   ||||||||||  ||||||||||| ||| ||||||||||||||    
T  46567478 gaagtatggaggggtatttataagtggaaatggtagtgtaggttataaccaccataaatgtggtcaaaaaaacgtgtaaa 46567399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 4e-25; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 2913164 - 2913262
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagt--caaaaaacgtgtaaaagttgt 144  Q
    |||||||||| |||||||||||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||   |||||||||||||| |||||    
T  2913164 tgagaaaatgtggaagtttggagggatatttataggtgagaatggtaatataggttataactaccataaatgtagtaaaaaaaaacgtgtaaaggttgt 2913262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 8725871 - 8725774
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa-cgtgtaaaagttgt 144  Q
    |||| ||||| | ||||||||||||||||||||||||  ||||| ||||||||||||||| ||| |||||||||||||||||| ||||||||| ||||    
T  8725871 tgaggaaatgagaaagtttggaggggtatttataggttggaatgataacataggttataactacaataaatgtagtcaaaaaatcgtgtaaaacttgt 8725774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 37524026 - 37524105
Alignment:
Q  60 gaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||| |||||||||||||||||||| ||||||||  ||||||| ||| |||||| ||||| ||||||||||||||||||    
T  37524026 gaagtatggaggggtatttataggtgggaatggtagtataggttttaaataccattaatgtggtcaaaaaacgtgtaaaa 37524105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 1536944 - 1537025
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||| ||||||||||||||||||    
T  1536944 gggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtggtcaaaaaacgtgtaaaa 1537025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 34354281 - 34354362
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||| ||||||||||||||||||    
T  34354281 gggaagtatggaggggtatttataggtgagaatggtagtataggttgtaaagaccattaatgtggtcaaaaaacgtgtaaaa 34354362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 41219233 - 41219315
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    ||||||||| |||||||  ||||||||||||||||||| ||||||||   ||||||||||  ||||||||||| |||||||||    
T  41219233 tgagaaaatagggaagtaaggaggggtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcaaaaaa 41219315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 31825916 - 31826007
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| | || |||| ||||||||||||||||||||  |||||||  ||||||| |||  ||||| ||||| ||||||||||||||||||    
T  31825916 tgagaaattaggaaagtatggaggggtatttataggtggaaatggtagtataggttgtaaacaccattaatgtggtcaaaaaacgtgtaaaa 31826007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 29714515 - 29714438
Alignment:
Q  61 aagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaa 138  Q
    |||| |||||||||||||||||||| |||||||   ||||||||||   |||||| |||| |||||||||||||||||    
T  29714515 aagtatggaggggtatttataggtgggaatggtggtataggttatagcaaccatagatgttgtcaaaaaacgtgtaaa 29714438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 48219663 - 48219572
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtga-atggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| |||||||||||||| |||| |||||||||| || || || |||||||||||||||  ||||||||||   ||||||||||||||||||    
T  48219663 tgaggaaatggggaagtttagaggtgtatttatag-tgggagattgtaacataggttatatctaccataaatagggtcaaaaaacgtgtaaaa 48219572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 26501000 - 26501091
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| |||| ||||||||| |||| ||||||||||| |   || |||||||||||||||  ||||||||||   ||||||||||||||||||    
T  26501000 tgaggaaattgggaagtttagaggtgtatttatagggggagattgtaacataggttatatctaccataaatagggtcaaaaaacgtgtaaaa 26501091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 26591713 - 26591622
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| |||| ||||||||| |||| ||||||||||| |   || |||||||||||||||  ||||||||||   ||||||||||||||||||    
T  26591713 tgaggaaattgggaagtttagaggtgtatttatagggggagattgtaacataggttatatctaccataaatagggtcaaaaaacgtgtaaaa 26591622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 21613243 - 21613166
Alignment:
Q  57 ggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtg 134  Q
    |||||||||| |||| ||||||||||| |   || |||||||||||||||  |||||||||| |||| ||||||||||    
T  21613243 ggggaagtttagaggtgtatttatagggggagattgtaacataggttatatctaccataaatatagtaaaaaaacgtg 21613166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 3746641 - 3746721
Alignment:
Q  60 gaagtttggaggggtatttataggtgtgaatgg-taacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| ||||| ||||||||||||| | |||||  | ||||||||||||| |||  |||||| |||||||||||||||||||    
T  3746641 gaaggttggaagggtatttataggggggaatgacttacataggttataactacactaaatgcagtcaaaaaacgtgtaaaa 3746721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 21153985 - 21153926
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataa 107  Q
    |||| |||| ||||||| |||||||||||||||||| | ||||||||  |||||||||||    
T  21153985 tgaggaaatagggaagtatggaggggtatttataggcgggaatggtagtataggttataa 21153926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 20377876 - 20377790
Alignment:
Q  53 aaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||| |||| ||||||||||| |   || |||||||||||||||  ||||||||||    |||||||||||||||||    
T  20377876 aaatgggaaagtttagaggtgtatttatagggggagattgtaacataggttatatctaccataaataggttcaaaaaacgtgtaaaa 20377790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 48218536 - 48218491
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggtt 103  Q
    ||||||| |||||||||||||||||||| ||||||||  |||||||    
T  48218536 gggaagtatggaggggtatttataggtgagaatggtagtataggtt 48218491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 4e-25; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 25886261 - 25886163
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaa--aaaacgtgtaaaagttgt 144  Q
    |||| |||||| ||||||||||||| |||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  25886261 tgaggaaatggagaagtttggagggatatttataggtgggaatgataagataggttataactaccataaatgtagtcaaaaaaaacgtgtaaaagttgt 25886163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 25744996 - 25745079
Alignment:
Q  57 ggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaag 140  Q
    ||||||||| ||||||||||||||| ||| ||||  ||| ||||||||||| |||||||||| ||||||||||||||| |||||    
T  25744996 ggggaagttaggaggggtatttataagtgggaataataaaataggttataactaccataaatatagtcaaaaaacgtgaaaaag 25745079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 1520818 - 1520705
Alignment:
Q  158 tagaaggtataggctcatacgacaaggatgatgattatgaagtgtatcttactgatggtgattcaaattcaactgtaactactactgctagaagaccttt 257  Q
    |||||||| |||||||  ||| | | |||||||||| ||||||| ||||||| || | |||||||||||||||   ||| |||||| | ||||||||||     
T  1520818 tagaaggtgtaggctccgacggcgaagatgatgattgtgaagtggatcttaccgacgttgattcaaattcaacaagaaccactacttccagaagaccttc 1520719  T
Q  258 caaaaagaaagctc 271  Q
    ||||||||||||||    
T  1520718 caaaaagaaagctc 1520705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 42947744 - 42947663
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| |||||  |||||||||||||||||    
T  42947744 gggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtgatcaaaaaacgtgtaaaa 42947663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 53824671 - 53824590
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  || || ||||| ||||||||||||||||||    
T  53824671 gggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacacgattaatgtggtcaaaaaacgtgtaaaa 53824590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 1520608 - 1520541
Alignment:
Q  272 ataacacagattcatcacctttaatggaaggtgatggaagatcactaaaagtgcttagttttactcaa 339  Q
    |||||||| || || ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||    
T  1520608 ataacacaaatccaccacctttaatggaaggtgaaggaagatcgctaaaagttcttggttttactcaa 1520541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 39415574 - 39415483
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtc-aaaaaacgtgtaaa 138  Q
    |||| |||| ||||||| |||||||||||||||||||| ||||||||   ||||||||||  ||||||||| | ||| ||||||||||||||    
T  39415574 tgaggaaatagggaagtatggaggggtatttataggtgggaatggtagtgtaggttataaccaccataaatatggtcaaaaaaacgtgtaaa 39415483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 35485625 - 35485543
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtc-aaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||| ||| |||||||||||||||    
T  35485625 gggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtggtcaaaaaaacgtgtaaaa 35485543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 48087071 - 48086989
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||| |||| ||||||| |||||||||||||||||||| ||||||||   |||||||||   ||||||||||| |||||||||    
T  48087071 tgaggaaatagggaagtatggaggggtatttataggtgggaatggtagtgtaggttatatccaccataaatgtggtcaaaaaa 48086989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 138
Target Start/End: Complemental strand, 32211345 - 32211263
Alignment:
Q  53 aaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaa-aaaacgtgtaaa 138  Q
    |||||||||||||| |||||||||    || || ||||||||  ||||||||||| |||||||||||||||||| ||||||||||||    
T  32211345 aaatggggaagttttgaggggtat----agatgggaatggtagtataggttataactaccataaatgtagtcaaaaaaacgtgtaaa 32211263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 50561633 - 50561576
Alignment:
Q  87 gaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaagttgt 144  Q
    |||||||||||||| |||||| ||| ||||||||||| ||||||||||||||| ||||    
T  50561633 gaatggtaacatagattataactacaataaatgtagtaaaaaaacgtgtaaaacttgt 50561576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 6755573 - 6755664
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| ||||||| |||||| |||  ||||||||||| |   || |||||||||||||||  |||||||||| ||||||||||||||| ||||    
T  6755573 tgaggaaatgggaaagtttagagatgtatttatagggggagattgtaacataggttatatctaccataaatatagtcaaaaaacgtgaaaaa 6755664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 2325319 - 2325391
Alignment:
Q  67 ggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||| ||||||||||||| ||||||||  || |||| |||  ||||| ||||| ||||||||||||||||||    
T  2325319 ggaggagtatttataggtgggaatggtagtattggttgtaaacaccattaatgttgtcaaaaaacgtgtaaaa 2325391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 138
Target Start/End: Original strand, 16967681 - 16967761
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaa 138  Q
    ||||||| ||||||||||||||||| || ||||||||  ||||||| |||  | ||| | ||| |||||||||||||||||    
T  16967681 gggaagtatggaggggtatttatagatgggaatggtagtataggttgtaaacaacattagtgtggtcaaaaaacgtgtaaa 16967761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 25575055 - 25574964
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtc-aaaaaacgtgtaaa 138  Q
    |||| |||| ||||||| |||||| ||||||||||||| ||||||||   || |||||||  |||||||| || ||| ||||||||||||||    
T  25575055 tgaggaaatagggaagtatggaggagtatttataggtgggaatggtagtgtatgttataaccaccataaacgtggtcaaaaaaacgtgtaaa 25574964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 42384421 - 42384508
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgt 135  Q
    |||| ||||||| |||||| |||| ||||||||||| |   || ||||||||||||||| |||||||||||   ||||||||| ||||    
T  42384421 tgaggaaatgggaaagtttagaggtgtatttatagggggagattgtaacataggttatatgtaccataaatagggtcaaaaaatgtgt 42384508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 8628659 - 8628577
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||| |||| ||||||| ||||||| |||||||||||| ||||||||  ||||||| ||| || ||| ||||| || ||||||    
T  8628659 tgagtaaatagggaagtatggagggatatttataggtgggaatggtagtataggttgtaaatatcattaatgtggtaaaaaaa 8628577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 49047566 - 49047612
Alignment:
Q  205 cttactgatggtgattcaaattcaactgtaactactactgctagaag 251  Q
    |||||||| |||||||||||||| |||| |||||||||| |||||||    
T  49047566 cttactgacggtgattcaaattccactggaactactactactagaag 49047612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 53825818 - 53825748
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaat 118  Q
    |||| |||||||||||||| |||| ||||||||||| |   || |||||||||||||||  ||||||||||    
T  53825818 tgaggaaatggggaagtttagaggtgtatttatagggggagattgtaacataggttatatctaccataaat 53825748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 9e-23; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 23602812 - 23602910
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagt--caaaaaacgtgtaaaagttgt 144  Q
    |||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||| |||||||||| ||||   |||||| |||||||||||||    
T  23602812 tgaggaaatggggaagtttagagggatatttataggtgagaatggtaacataggttataactaccataaatctagtaaaaaaaaaagtgtaaaagttgt 23602910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 41871961 - 41871879
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||| |||| ||||||| |||||||||||||||||||| ||||||||   ||||||||||  ||||||||||| |||||||||    
T  41871961 tgaggaaatagggaagtatggaggggtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcaaaaaa 41871879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 49597420 - 49597330
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaa 138  Q
    |||| |||| ||||||| |||||||||||||||||||| |||||||    ||||||||||  ||||||||||| ||||||||| |||||||    
T  49597420 tgaggaaatagggaagtatggaggggtatttataggtgggaatggtggtgtaggttataaccaccataaatgtggtcaaaaaatgtgtaaa 49597330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 30308565 - 30308484
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| | |||||||||||||||||| ||||||||  ||||||| ||| |||||| ||||| |||||||||||| |||||    
T  30308565 gggaagtattgaggggtatttataggtgggaatggtagtataggttgtaaataccattaatgtggtcaaaaaacgtataaaa 30308484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 47485768 - 47485687
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||| ||||||||| ||||||||    
T  47485768 gggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtggtcaaaaaaagtgtaaaa 47485687  T

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Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 5767461 - 5767552
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa-cgtgtaaaa 139  Q
    |||||||||||||||||||||| | ||||||||||  | | || |||||||||||||||  |||||||||| ||||||||||| |||||||||    
T  5767461 tgagaaaatggggaagtttggaagtgtatttatagaggag-attgtaacataggttatatctaccataaatatagtcaaaaaatcgtgtaaaa 5767552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 45690465 - 45690557
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtga-atggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| |||||||||||||| |||| ||||||||||| | || || |||||||||||||||  ||||||||||   ||||||||||||||||||    
T  45690465 tgaggaaatggggaagtttagaggtgtatttataggggggagattgtaacataggttatatctaccataaatagggtcaaaaaacgtgtaaaa 45690557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 3660033 - 3660116
Alignment:
Q  46 tatgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaa 129  Q
    ||||||||| | ||||||| |||||| ||||||||||||| ||||||||  ||||||| ||| |||||| ||||| ||||||||    
T  3660033 tatgagaaattagggaagtatggaggagtatttataggtgggaatggtagtataggttgtaaataccattaatgtggtcaaaaa 3660116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 9343705 - 9343614
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagt-caaaaaacgtgtaaa 138  Q
    |||| |||| ||||||| ||||||| |||||||||||| ||||| ||  ||||||||||| |||||||||||| ||  ||||||||||||||    
T  9343705 tgaggaaatagggaagtatggagggatatttataggtgggaatgatagtataggttataactaccataaatgtggtaaaaaaaacgtgtaaa 9343614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 27034275 - 27034184
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| |||||| ||||||| |||| ||||||||||| |   || |||||||||||||||  ||||||||||  |||||||||||||||||||    
T  27034275 tgaggaaatggagaagtttagaggtgtatttatagggggagattgtaacataggttatatctaccataaatagagtcaaaaaacgtgtaaaa 27034184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 48566986 - 48566904
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||| |||| ||||| | |||||||||||||||||||| ||||||||   ||||||||||  ||||||||||| |||||||||    
T  48566986 tgaggaaatagggaaatatggaggggtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcaaaaaa 48566904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 27033149 - 27033068
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||| ||  |||||||||||  | ||| || || ||||||||||||||||||    
T  27033149 gggaagtatggaggggtatttataggtgagaatgatagtataggttataaacatcattaacgtggtcaaaaaacgtgtaaaa 27033068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 39222921 - 39222840
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||| ||| ||||||||  |||||||  || |||||| ||||| ||||||||| ||||||||    
T  39222921 gggaagtatggaggggtatttatacgtgggaatggtagtataggttgaaaataccattaatgtggtcaaaaaatgtgtaaaa 39222840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 21483125 - 21483053
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    ||||||| |||||||||||||||| ||| ||||||||  ||||||| ||| |||||| ||||| |||||||||    
T  21483125 gggaagtatggaggggtatttatatgtgggaatggtagtataggttgtaaataccattaatgtggtcaaaaaa 21483053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 26013537 - 26013629
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtattt-ataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| |||| ||||||| ||||| ||||||| ||||||| ||||| ||  ||| |||||||  | ||||||||||||||||||||||||||||    
T  26013537 tgaggaaatagggaagtatggagaggtattttataggtgagaatgatagtataagttataacaaacataaatgtagtcaaaaaacgtgtaaaa 26013629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 46923997 - 46923917
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaa 138  Q
    ||||||| ||||| | |||||||||||| ||||| ||  ||||||| ||| |||||| ||||| |||||||||||||||||    
T  46923997 gggaagtatggagagatatttataggtgggaatgatagtataggttgtaaataccattaatgtggtcaaaaaacgtgtaaa 46923917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 50065843 - 50065771
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||| |||||||||    
T  50065843 gggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtggtcaaaaaa 50065771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 290 - 376
Target Start/End: Complemental strand, 2912395 - 2912309
Alignment:
Q  290 ctttaatggaaggtgatggaagatcactaaaagtgcttagttttactcaaagtgagggagattctttcctgcagattttaatgaggt 376  Q
    ||||||||||||| || |||| ||||||||||||| |  ||||||||||| || || ||| | ||||||| ||| ||||||||||||    
T  2912395 ctttaatggaaggcgaaggaaaatcactaaaagtgataggttttactcaacgtcagagagctgctttccttcagcttttaatgaggt 2912309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 2912599 - 2912510
Alignment:
Q  182 aggatgatgattatgaagtgtatcttactgatggtgattcaaattcaactgtaactactactgctagaagacctttcaaaaagaaagctc 271  Q
    ||||||| |||||||||||| ||| ||| || |||||||||||||||||   |||||||||  | | |||||||| |||||||| |||||    
T  2912599 aggatgacgattatgaagtggatcataccgacggtgattcaaattcaacaagaactactacatccaaaagaccttccaaaaagacagctc 2912510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 3782129 - 3782092
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtg 85  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3782129 tgagaaaatgaggaagtttggaggggtatttataggtg 3782092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 5766683 - 5766772
Alignment:
Q  51 gaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa-cgtgtaaaa 139  Q
    ||||||||| ||||||||||| ||||||||||| |   || |||||||||||||||  |||||||||  ||| ||||||| |||||||||    
T  5766683 gaaaatgggaaagtttggaggtgtatttatagggggagattgtaacataggttatatctaccataaacatagccaaaaaatcgtgtaaaa 5766772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 18171832 - 18171913
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| ||||||| |||||||| ||| ||||||||  ||||||| |||  ||||| ||| | ||||||||||||||||||    
T  18171832 gggaagtatggagggatatttataagtgggaatggtagtataggttgtaaacaccattaatatggtcaaaaaacgtgtaaaa 18171913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 11012366 - 11012268
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagt--caaaaaacgtgtaaaagttgt 144  Q
    |||| |||| ||||||| || | ||||||||||||||| ||||||||   ||||||||||  ||||||||||| ||   |||||||||||||| |||||    
T  11012366 tgaggaaatagggaagtatgaaagggtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtaaaaaaaaacgtgtaaaggttgt 11012268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 50067048 - 50066958
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| |||||||||||||| |||  ||||||||||| | || || ||||||||||||||  |||||| |||   ||||||||||||||||||    
T  50067048 tgaggaaatggggaagtttagagatgtatttataggggggattg-taacataggttatatctaccattaatagggtcaaaaaacgtgtaaaa 50066958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 47983891 - 47983818
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaac 131  Q
    ||||||||| |||| ||||||||| | |   || |||||||||||||||  |||||||||| ||||||||||||    
T  47983891 gggaagtttagaggtgtatttataaggggagattgtaacataggttatatttaccataaatatagtcaaaaaac 47983818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 5e-21; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 8556455 - 8556375
Alignment:
Q  59 ggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||||| ||||||||||||||||||||  |||||||  ||||||||||| |||||| ||||||||||||||||||||||||    
T  8556455 ggaagtatggaggggtatttataggtggaaatggtagtataggttataaataccattaatgtagtcaaaaaacgtgtaaaa 8556375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 13785273 - 13785176
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtc-aaaaaacgtgtaaaagttgt 144  Q
    |||| |||| || |||| |||||||||||||||||||| ||||||||  |||||||||||  ||||||||||| ||| |||||||||||| |||||||    
T  13785273 tgaggaaataggaaagtatggaggggtatttataggtgggaatggtagtataggttataaccaccataaatgtggtcaaaaaaacgtgtagaagttgt 13785176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 25685911 - 25686008
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaa-acgtgtaaaagttgt 144  Q
    |||| |||| ||||||| |||||||||||||||||||| ||||||||   ||||||||||  ||||||||||| |||||||| ||||||||| |||||    
T  25685911 tgaggaaatagggaagtatggaggggtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcaaaaatacgtgtaaaggttgt 25686008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 24937255 - 24937346
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaa-acgtgtaaa 138  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||| ||   ||||||||||  ||||||||||| |||||||| |||||||||    
T  24937255 tgagaaaatagggaagtatggaggggtatttataggtgggaatgatagtgtaggttataaccaccataaatgtggtcaaaaatacgtgtaaa 24937346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 29132502 - 29132584
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtc-aaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||| ||| ||||||| ||| |||||| ||||| ||| |||||||||||||||    
T  29132502 gggaagtatggaggggtatttataggtgggaatgataatataggttgtaaataccattaatgtggtcaaaaaaacgtgtaaaa 29132584  T

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Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 12967597 - 12967518
Alignment:
Q  60 gaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||| |||||||||||||||||||| ||||||||  ||||||| |||  | ||| ||||| ||||||||||||||||||    
T  12967597 gaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacatcattaatgtggtcaaaaaacgtgtaaaa 12967518  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 20149455 - 20149492
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtg 85  Q
    |||| |||||||||||||||||||||||||||||||||    
T  20149455 tgaggaaatggggaagtttggaggggtatttataggtg 20149492  T

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Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 22495772 - 22495853
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| || ||||||||||||||||| ||||||||  |||| || |||  ||||| ||||| ||||||||| ||||||||    
T  22495772 gggaagtatgaaggggtatttataggtgggaatggtagtatagattgtaaacaccattaatgtggtcaaaaaaagtgtaaaa 22495853  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 16710104 - 16710185
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaa 129  Q
    |||| ||||||| |||||| |||| ||||||||||| |   || ||||| |||||||||  |||||||||| ||||||||||    
T  16710104 tgaggaaatgggaaagtttagaggtgtatttatagggggagattgtaacgtaggttatatctaccataaatatagtcaaaaa 16710185  T

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Target: chr8 (Bit Score: 45; Significance: 3e-16; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 43835187 - 43835279
Alignment:
Q  53 aaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagt-caaaaaacgtgtaaaagttgt 144  Q
    ||||||||||||||| |  |||||||||||||| ||||||||||||| ||| ||| ||| |||||||||||  ||||||||||||||| ||||    
T  43835187 aaatggggaagtttgcaaaggtatttataggtgagaatggtaacatatgttttaactacaataaatgtagtaaaaaaaacgtgtaaaacttgt 43835279  T

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Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 28704222 - 28704141
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  |||||||||||  ||||| ||| | ||||||||||||| ||||    
T  28704222 gggaagtatggaggggtatttataggtgggaatggtagtataggttataaacaccattaatatggtcaaaaaacgtgaaaaa 28704141  T

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Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 34471450 - 34471532
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||| |||| || |||| |||||||||||||||||||| ||||||||   ||||||||||  ||||||||||| |||||||||    
T  34471450 tgaggaaataggaaagtatggaggggtatttataggtgggaatggtagtgtaggttataaccaccataaatgtggtcaaaaaa 34471532  T

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Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 43635488 - 43635411
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgt 135  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||| ||||||||| ||||    
T  43635488 gggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtggtcaaaaaaagtgt 43635411  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 43636566 - 43636475
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| ||| |||||||||| |||| ||||||||||| |   || |||||||||||||||  ||||||||||   ||||||||||||||||||    
T  43636566 tgaggaaaaggggaagtttagaggtgtatttatagggggagattgtaacataggttatatctaccataaatagggtcaaaaaacgtgtaaaa 43636475  T

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Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 23542610 - 23542691
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||| ||  ||| ||| ||| || ||| ||| | ||||||||||||||||||    
T  23542610 gggaagtatggaggggtatttataggtgggaatgatagtataagttgtaaatatcattaatatggtcaaaaaacgtgtaaaa 23542691  T

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Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 4639987 - 4639915
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    ||||||| |||||||||||||||||||| || |||||| ||||||| |||  ||||| ||||| || ||||||    
T  4639987 gggaagtatggaggggtatttataggtgggattggtaatataggttgtaaacaccatcaatgtggtaaaaaaa 4639915  T

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Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 10829689 - 10829626
Alignment:
Q  75 atttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaa 138  Q
    ||||||||||| ||||||||  ||||||||||| || ||| ||||| ||||||||| |||||||    
T  10829689 atttataggtgggaatggtagtataggttataaatatcattaatgtggtcaaaaaatgtgtaaa 10829626  T

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Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 1931578 - 1931485
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaa--aacgtgtaaaa 139  Q
    |||||||||| |||||||||||||  |||||||||| |   || |||||||||||||||  |||| ||||| |||| ||||  |||||||||||    
T  1931578 tgagaaaatgtggaagtttggaggtatatttatagggggagattgtaacataggttatatctaccgtaaatatagtaaaaaagaacgtgtaaaa 1931485  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 3964222 - 3964185
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtg 85  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  3964222 tgaggaaatgaggaagtttggaggggtatttataggtg 3964185  T

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Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 15938 - 16020
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||| ||||| ||||||||| ||||||||||||||||| ||||||||  ||||||||||| |||||||| |||| | ||||||    
T  15938 tgaggaaatgaggaagtttgaaggggtatttataggtgggaatggtagtataggttataactaccataagtgtaataaaaaaa 16020  T

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Target: scaffold0861 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 3578 - 3658
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| ||| |||||| ||||| |||||||||| |||||||    
T  3578 gggaagtatggaggggtatttataggtg-gaatggtagtataggttttaaataccattaatgtggtcaaaaaacatgtaaaa 3658  T

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Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 16444646 - 16444565
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| || ||||||||||||||||| ||||||||  ||||||| |||  ||||| ||||| ||||||||||||||||||    
T  16444646 gggaagtatgaaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatgtggtcaaaaaacgtgtaaaa 16444565  T

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Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 35053686 - 35053605
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||| |||  ||||| ||| | ||||||||||||||||||    
T  35053686 gggaagtatggaggggtatttataggtgggaatggtagtataggttgtaaacaccattaatatggtcaaaaaacgtgtaaaa 35053605  T

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Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 13312819 - 13312728
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||||| || |||| |||||| ||||||||| ||| ||||||||   ||||||||||  | ||||||||| ||||||||||||||||||    
T  13312819 tgagaaaataggaaagtatggaggagtatttataagtgggaatggtagtttaggttataacaaacataaatgtggtcaaaaaacgtgtaaaa 13312728  T

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Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 14153733 - 14153652
Alignment:
Q  58 gggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||| |||||||||||||||||||| || |||||  ||||||| |||  ||||| ||||| ||||| ||||||||||||    
T  14153733 gggaagtatggaggggtatttataggtgggagtggtagtataggttgtaaacaccattaatgtggtcaagaaacgtgtaaaa 14153652  T

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Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 9400239 - 9400159
Alignment:
Q  59 ggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    ||||||||||||| ||||||||||| |   || |||||||||||||||  |||||||||| || | |||||||||||||||    
T  9400239 ggaagtttggaggagtatttatagggggagattgtaacataggttatatctaccataaatatactaaaaaaacgtgtaaaa 9400159  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 11718507 - 11718589
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaa 130  Q
    |||||||||  |||||| || ||||||||||||||||| ||||||||  ||| ||||||| |||||| ||||| || ||||||    
T  11718507 tgagaaaataaggaagtatgaaggggtatttataggtgagaatggtagtataagttataaataccattaatgtggtaaaaaaa 11718589  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 14830770 - 14830690
Alignment:
Q  59 ggaagtttggaggggtatttataggtgtgaatggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||||| |||||||||||||||||||| ||||| ||  |||| || |||  ||||| ||||| || |||||||||||||||    
T  14830770 ggaagtatggaggggtatttataggtgggaatgatattatagattgtaaacaccattaatgtggtaaaaaaacgtgtaaaa 14830690  T

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Target: scaffold1700 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1700
Description:

Target: scaffold1700; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 985 - 1076
Alignment:
Q  48 tgagaaaatggggaagtttggaggggtatttataggtgtga-atggtaacataggttataagtaccataaatgtagtcaaaaaacgtgtaaaa 139  Q
    |||| |||||||||||||| |||| ||||||||||| | || || |||||||||||||||  ||||||||||   || |||||||||||||||    
T  985 tgaggaaatggggaagtttagaggtgtatttatagg-gagagattgtaacataggttatatctaccataaatagggtaaaaaaacgtgtaaaa 1076  T

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Target: scaffold1455 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 75 - 116
Alignment:
Q  61 aagtttggaggggtatttataggtgtgaatggtaacataggt 102  Q
    |||| |||||||||||||||||||| ||||||||| ||||||    
T  75 aagtatggaggggtatttataggtgggaatggtaatataggt 116  T

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