View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14352_high_23 (Length: 274)
Name: NF14352_high_23
Description: NF14352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14352_high_23 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 9 - 261
Target Start/End: Complemental strand, 33656967 - 33656718
Alignment:
| Q |
9 |
taattctagagtataatttcaagtggcaaaaccaacctaaattagttaatgacctaaaggtaaagccattgaaacaattattgttttaagactnnnnnnn |
108 |
Q |
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| T |
33656967 |
taattcaagagtataatttcaagtggcaaaaccaacctaaattagttaatgacctaaaggtaaagccattgaaacaattattgttttaagactcaaaaaa |
33656868 |
T |
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| Q |
109 |
tattagaaaattatctgataaagaaaatctcttgtactctagtaattttagtaaagggttattacgatcttcaaaataaccgtattctaaaataaataaa |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
33656867 |
tattagaaaattatctgataaagaaaatctcttgtactctagtaattttagtaaagggttattacgatcttcaaaataaccgtattctaaaata---aaa |
33656771 |
T |
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| Q |
209 |
aaatcgtcttagaccttaatacgtggtgagtcggttatttcagcaatgaagtg |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
33656770 |
aaatcgtcttagaccttaatacgtggtgagtcggttatttgagcaatgaagtg |
33656718 |
T |
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