View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14353_high_42 (Length: 348)

Name: NF14353_high_42
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14353_high_42
NF14353_high_42
[»] chr2 (48 HSPs)
chr2 (115-220)||(14530278-14530384)
chr2 (115-220)||(12023988-12024093)
chr2 (115-220)||(8455385-8455491)
chr2 (115-220)||(10543658-10543764)
chr2 (115-190)||(11514396-11514471)
chr2 (115-220)||(24200694-24200800)
chr2 (126-220)||(17667973-17668068)
chr2 (115-190)||(21779359-21779434)
chr2 (115-190)||(23397726-23397801)
chr2 (115-190)||(25079818-25079893)
chr2 (249-304)||(42808528-42808583)
chr2 (115-190)||(9671140-9671216)
chr2 (126-220)||(17623535-17623630)
chr2 (115-190)||(17896219-17896294)
chr2 (133-190)||(5450263-5450320)
chr2 (115-188)||(22371017-22371090)
chr2 (115-191)||(19977813-19977889)
chr2 (115-183)||(25249844-25249912)
chr2 (115-182)||(17705455-17705522)
chr2 (115-162)||(27573581-27573628)
chr2 (130-220)||(40416940-40417031)
chr2 (115-220)||(7214494-7214600)
chr2 (303-348)||(10543754-10543799)
chr2 (121-190)||(39914406-39914475)
chr2 (118-190)||(44521473-44521544)
chr2 (115-190)||(14544023-14544098)
chr2 (127-190)||(44604826-44604889)
chr2 (119-189)||(24860087-24860157)
chr2 (144-220)||(19614981-19615058)
chr2 (303-348)||(24200659-24200704)
chr2 (252-304)||(26826982-26827039)
chr2 (116-220)||(32781357-32781461)
chr2 (131-219)||(33795261-33795350)
chr2 (249-302)||(44089183-44089236)
chr2 (303-348)||(44449419-44449463)
chr2 (118-190)||(99363-99434)
chr2 (115-183)||(5840988-5841056)
chr2 (146-220)||(10546153-10546229)
chr2 (308-348)||(14530379-14530419)
chr2 (118-190)||(17380336-17380407)
chr2 (304-348)||(31158475-31158519)
chr2 (115-155)||(39189556-39189596)
chr2 (118-170)||(44643486-44643537)
chr2 (115-158)||(27466262-27466305)
chr2 (131-190)||(29419989-29420048)
chr2 (119-150)||(39499354-39499385)
chr2 (310-348)||(23488544-23488582)
chr2 (132-190)||(34752762-34752820)
[»] chr5 (36 HSPs)
chr5 (115-220)||(38879541-38879647)
chr5 (115-190)||(1565391-1565466)
chr5 (115-220)||(4619175-4619281)
chr5 (115-220)||(41014279-41014384)
chr5 (115-188)||(43334162-43334235)
chr5 (115-190)||(35710273-35710348)
chr5 (115-190)||(37024654-37024729)
chr5 (115-220)||(24448850-24448956)
chr5 (115-220)||(8170053-8170157)
chr5 (115-190)||(23974741-23974815)
chr5 (115-220)||(27328712-27328818)
chr5 (115-184)||(22600414-22600483)
chr5 (303-348)||(43334259-43334304)
chr5 (118-190)||(39301087-39301158)
chr5 (115-190)||(22187245-22187320)
chr5 (115-170)||(22861786-22861841)
chr5 (131-190)||(28516534-28516593)
chr5 (303-348)||(38879637-38879682)
chr5 (118-170)||(39079886-39079937)
chr5 (303-346)||(4619142-4619185)
chr5 (120-190)||(12006430-12006500)
chr5 (303-346)||(13801805-13801848)
chr5 (303-346)||(20135660-20135703)
chr5 (115-190)||(31299592-31299667)
chr5 (115-164)||(2838738-2838788)
chr5 (118-188)||(10634248-10634317)
chr5 (306-348)||(12006364-12006406)
chr5 (115-165)||(19438709-19438759)
chr5 (144-190)||(32703413-32703459)
chr5 (138-198)||(1405170-1405231)
chr5 (303-348)||(11657735-11657779)
chr5 (303-348)||(27328808-27328853)
chr5 (115-211)||(30006285-30006382)
chr5 (252-285)||(34375172-34375205)
chr5 (252-285)||(35540634-35540667)
chr5 (118-190)||(209027-209098)
[»] chr8 (44 HSPs)
chr8 (115-220)||(7136598-7136704)
chr8 (113-190)||(20869596-20869673)
chr8 (115-190)||(12670348-12670423)
chr8 (115-190)||(30454195-30454270)
chr8 (115-220)||(28817695-28817801)
chr8 (115-220)||(36720756-36720862)
chr8 (115-220)||(39461065-39461171)
chr8 (115-220)||(29521754-29521860)
chr8 (115-220)||(44530109-44530215)
chr8 (115-198)||(20284164-20284248)
chr8 (115-198)||(21070793-21070877)
chr8 (118-190)||(28407379-28407451)
chr8 (115-190)||(2626479-2626554)
chr8 (119-190)||(17823540-17823611)
chr8 (115-182)||(24245411-24245478)
chr8 (119-220)||(6760786-6760888)
chr8 (115-220)||(13160662-13160767)
chr8 (131-220)||(22598133-22598223)
chr8 (115-220)||(35261639-35261745)
chr8 (119-190)||(18164859-18164930)
chr8 (115-220)||(8897833-8897939)
chr8 (107-183)||(25250474-25250550)
chr8 (134-190)||(35105902-35105958)
chr8 (118-190)||(44781606-44781677)
chr8 (115-220)||(45071225-45071330)
chr8 (137-190)||(31457155-31457208)
chr8 (249-304)||(37698567-37698620)
chr8 (115-208)||(11748259-11748353)
chr8 (303-348)||(20284105-20284150)
chr8 (303-348)||(21070733-21070778)
chr8 (118-183)||(42083806-42083870)
chr8 (251-304)||(18405319-18405374)
chr8 (249-304)||(27127153-27127213)
chr8 (119-183)||(31454152-31454216)
chr8 (303-346)||(7136565-7136608)
chr8 (115-190)||(26954092-26954167)
chr8 (124-190)||(12625858-12625924)
chr8 (252-309)||(30232764-30232820)
chr8 (303-348)||(39461030-39461075)
chr8 (303-340)||(43942380-43942417)
chr8 (252-304)||(44598941-44598998)
chr8 (249-285)||(10730432-10730468)
chr8 (131-187)||(11001053-11001109)
chr8 (118-190)||(30962873-30962944)
[»] chr7 (47 HSPs)
chr7 (115-220)||(46354154-46354260)
chr7 (116-220)||(11617657-11617762)
chr7 (106-198)||(42495926-42496019)
chr7 (115-217)||(2541091-2541195)
chr7 (115-183)||(47077960-47078028)
chr7 (115-190)||(48735220-48735296)
chr7 (115-190)||(21172107-21172182)
chr7 (115-190)||(32758221-32758296)
chr7 (116-190)||(10693171-10693245)
chr7 (105-183)||(35334921-35334999)
chr7 (115-220)||(42805484-42805590)
chr7 (115-220)||(43557432-43557538)
chr7 (115-190)||(7193045-7193120)
chr7 (120-190)||(19426989-19427059)
chr7 (115-220)||(42798629-42798735)
chr7 (115-220)||(47716419-47716525)
chr7 (115-188)||(14732924-14732997)
chr7 (117-190)||(27629596-27629669)
chr7 (118-190)||(48123584-48123655)
chr7 (115-190)||(5180257-5180332)
chr7 (115-190)||(7794606-7794681)
chr7 (115-190)||(18326994-18327069)
chr7 (129-190)||(33872009-33872070)
chr7 (115-183)||(1424017-1424085)
chr7 (118-190)||(12473267-12473339)
chr7 (114-170)||(40463836-40463892)
chr7 (118-220)||(28362214-28362316)
chr7 (131-220)||(16341254-16341344)
chr7 (115-181)||(22699079-22699145)
chr7 (118-181)||(13805066-13805128)
chr7 (115-188)||(34626309-34626382)
chr7 (311-348)||(39123957-39123994)
chr7 (115-183)||(28078238-28078306)
chr7 (119-163)||(29140487-29140531)
chr7 (115-183)||(42476833-42476901)
chr7 (132-198)||(6736867-6736934)
chr7 (303-346)||(46354250-46354293)
chr7 (303-346)||(47716515-47716558)
chr7 (120-170)||(19265781-19265830)
chr7 (131-190)||(29907393-29907454)
chr7 (137-183)||(42391205-42391251)
chr7 (308-346)||(42805585-42805623)
chr7 (118-163)||(3469306-3469350)
chr7 (303-348)||(33500569-33500614)
chr7 (130-190)||(7644931-7644991)
chr7 (150-190)||(31591207-31591247)
chr7 (249-281)||(45261872-45261904)
[»] chr3 (50 HSPs)
chr3 (115-220)||(8247758-8247864)
chr3 (115-220)||(29366791-29366897)
chr3 (115-220)||(40272881-40272987)
chr3 (115-220)||(46421106-46421212)
chr3 (115-190)||(10870051-10870126)
chr3 (115-220)||(13730673-13730779)
chr3 (115-190)||(52926310-52926385)
chr3 (115-190)||(5173820-5173896)
chr3 (115-183)||(7696992-7697060)
chr3 (115-190)||(1217072-1217147)
chr3 (115-220)||(13628861-13628968)
chr3 (115-220)||(16735423-16735528)
chr3 (118-190)||(35417902-35417973)
chr3 (115-190)||(9607185-9607260)
chr3 (118-220)||(26573113-26573215)
chr3 (122-189)||(26869696-26869763)
chr3 (115-220)||(4495733-4495839)
chr3 (115-220)||(12914104-12914210)
chr3 (115-183)||(22123022-22123090)
chr3 (118-217)||(34420716-34420815)
chr3 (249-304)||(9144810-9144865)
chr3 (115-190)||(39203498-39203573)
chr3 (115-220)||(22609749-22609853)
chr3 (113-163)||(25517300-25517350)
chr3 (303-348)||(45786250-45786295)
chr3 (118-190)||(45620929-45621000)
chr3 (249-304)||(50462708-50462768)
chr3 (115-211)||(12525392-12525486)
chr3 (115-220)||(6411891-6411996)
chr3 (303-345)||(45139515-45139557)
chr3 (144-220)||(516420-516497)
chr3 (303-348)||(10795459-10795504)
chr3 (303-348)||(13628826-13628871)
chr3 (252-304)||(29322821-29322878)
chr3 (303-348)||(29366756-29366801)
chr3 (118-190)||(45948938-45949012)
chr3 (303-348)||(46421071-46421116)
chr3 (131-188)||(53062036-53062093)
chr3 (144-220)||(54032628-54032705)
chr3 (303-346)||(353387-353430)
chr3 (135-190)||(30928247-30928302)
chr3 (303-346)||(49013511-49013554)
chr3 (118-220)||(53996635-53996737)
chr3 (308-346)||(13730640-13730678)
chr3 (304-345)||(5173758-5173799)
chr3 (115-190)||(21875002-21875070)
chr3 (308-348)||(8247723-8247763)
chr3 (118-182)||(25944455-25944518)
chr3 (253-304)||(31372465-31372521)
chr3 (252-288)||(55140549-55140585)
[»] chr4 (60 HSPs)
chr4 (115-190)||(20224944-20225019)
chr4 (115-190)||(48598923-48598998)
chr4 (115-220)||(5648219-5648324)
chr4 (115-220)||(6430695-6430800)
chr4 (116-220)||(16408672-16408777)
chr4 (113-220)||(21646922-21647030)
chr4 (115-190)||(5306763-5306838)
chr4 (115-190)||(17315398-17315473)
chr4 (115-220)||(16911522-16911628)
chr4 (115-190)||(10660364-10660439)
chr4 (115-190)||(10874509-10874584)
chr4 (115-190)||(14590797-14590872)
chr4 (115-170)||(23501753-23501808)
chr4 (115-190)||(47528628-47528703)
chr4 (115-220)||(30639340-30639445)
chr4 (115-183)||(11054253-11054321)
chr4 (115-190)||(37494811-37494886)
chr4 (118-190)||(487235-487306)
chr4 (115-183)||(5313101-5313169)
chr4 (130-220)||(19027823-19027914)
chr4 (115-190)||(30352691-30352766)
chr4 (1-47)||(9462083-9462129)
chr4 (120-190)||(42164248-42164317)
chr4 (249-304)||(49268746-49268805)
chr4 (118-190)||(54640439-54640510)
chr4 (115-166)||(20405053-20405104)
chr4 (131-190)||(43035224-43035283)
chr4 (144-190)||(25463111-25463157)
chr4 (118-190)||(32629368-32629436)
chr4 (128-190)||(40915802-40915864)
chr4 (138-220)||(41018863-41018945)
chr4 (116-190)||(54966983-54967056)
chr4 (303-348)||(16494273-16494318)
chr4 (303-348)||(16911618-16911663)
chr4 (252-304)||(28972531-28972588)
chr4 (303-348)||(30352616-30352661)
chr4 (307-348)||(33836523-33836564)
chr4 (249-304)||(1763369-1763429)
chr4 (115-179)||(13256508-13256572)
chr4 (308-348)||(23501848-23501888)
chr4 (128-188)||(44363234-44363294)
chr4 (249-288)||(6377622-6377661)
chr4 (303-346)||(13256437-13256480)
chr4 (115-150)||(18969701-18969736)
chr4 (303-346)||(20225130-20225173)
chr4 (249-288)||(28185587-28185626)
chr4 (119-190)||(30496420-30496491)
chr4 (115-190)||(54730209-54730284)
chr4 (115-166)||(55766590-55766641)
chr4 (120-190)||(8473720-8473790)
chr4 (135-220)||(17043463-17043549)
chr4 (136-190)||(39077894-39077948)
chr4 (118-183)||(12257700-12257764)
chr4 (303-348)||(20639694-20639738)
chr4 (315-348)||(44363166-44363199)
chr4 (121-190)||(49938690-49938759)
chr4 (212-256)||(28185042-28185086)
chr4 (308-348)||(30581501-30581540)
chr4 (133-189)||(32478886-32478942)
chr4 (316-348)||(47482886-47482918)
[»] chr1 (62 HSPs)
chr1 (115-190)||(34725196-34725271)
chr1 (115-220)||(18944626-18944732)
chr1 (115-220)||(30395797-30395903)
chr1 (115-220)||(32632626-32632731)
chr1 (115-220)||(46991787-46991893)
chr1 (115-183)||(22930174-22930242)
chr1 (115-183)||(47214494-47214562)
chr1 (115-190)||(14617021-14617096)
chr1 (119-220)||(18724614-18724715)
chr1 (115-189)||(20004193-20004267)
chr1 (115-220)||(46248022-46248128)
chr1 (115-190)||(9939443-9939519)
chr1 (117-220)||(19932824-19932925)
chr1 (115-183)||(34714606-34714674)
chr1 (115-170)||(18742081-18742136)
chr1 (119-190)||(20036208-20036278)
chr1 (115-190)||(38478380-38478455)
chr1 (115-170)||(40424725-40424780)
chr1 (118-211)||(22327086-22327179)
chr1 (115-220)||(23768389-23768495)
chr1 (115-220)||(41319875-41319981)
chr1 (303-348)||(35005202-35005247)
chr1 (115-218)||(8197026-8197130)
chr1 (115-190)||(10668203-10668283)
chr1 (115-183)||(25290146-25290214)
chr1 (115-183)||(45812642-45812710)
chr1 (249-304)||(4447794-4447849)
chr1 (115-190)||(27201630-27201705)
chr1 (115-190)||(45402078-45402152)
chr1 (118-188)||(2435889-2435958)
chr1 (118-188)||(2435995-2436064)
chr1 (303-348)||(19932789-19932834)
chr1 (132-220)||(25468332-25468421)
chr1 (115-183)||(27474264-27474332)
chr1 (115-170)||(19414422-19414477)
chr1 (119-190)||(33222971-33223042)
chr1 (128-190)||(6925096-6925158)
chr1 (118-188)||(6983911-6983980)
chr1 (110-168)||(12126957-12127015)
chr1 (303-345)||(27201726-27201768)
chr1 (310-348)||(50606487-50606525)
chr1 (119-168)||(4430148-4430197)
chr1 (303-348)||(18741993-18742038)
chr1 (303-348)||(18944722-18944767)
chr1 (267-304)||(48814129-48814166)
chr1 (118-183)||(50811926-50811990)
chr1 (308-348)||(35117802-35117842)
chr1 (308-348)||(42304243-42304283)
chr1 (118-190)||(52910204-52910275)
chr1 (119-190)||(11596501-11596571)
chr1 (118-220)||(17470415-17470517)
chr1 (303-346)||(30395764-30395807)
chr1 (131-190)||(35117868-35117927)
chr1 (118-163)||(15511278-15511322)
chr1 (267-304)||(20270593-20270630)
chr1 (118-198)||(35019217-35019297)
chr1 (118-186)||(44485213-44485280)
chr1 (249-304)||(5153667-5153726)
chr1 (308-348)||(10668309-10668349)
chr1 (115-183)||(18335395-18335463)
chr1 (118-190)||(25554822-25554893)
chr1 (118-190)||(50760326-50760397)
[»] chr6 (33 HSPs)
chr6 (119-220)||(12221986-12222088)
chr6 (115-183)||(1346924-1346992)
chr6 (115-190)||(1354855-1354930)
chr6 (115-220)||(8409203-8409309)
chr6 (115-183)||(3815184-3815252)
chr6 (107-190)||(14975180-14975263)
chr6 (109-190)||(24734587-24734668)
chr6 (123-190)||(2166512-2166579)
chr6 (123-190)||(2178145-2178212)
chr6 (115-220)||(29355926-29356033)
chr6 (116-221)||(13905047-13905152)
chr6 (115-198)||(12063427-12063511)
chr6 (115-190)||(9161083-9161158)
chr6 (115-190)||(15866137-15866212)
chr6 (109-218)||(20400621-20400731)
chr6 (115-220)||(1941815-1941921)
chr6 (124-190)||(6024202-6024268)
chr6 (303-348)||(12221951-12221996)
chr6 (303-348)||(29355891-29355936)
chr6 (300-348)||(12885964-12886012)
chr6 (308-347)||(2166447-2166486)
chr6 (308-347)||(2178080-2178119)
chr6 (249-288)||(2979117-2979156)
chr6 (118-220)||(7947441-7947543)
chr6 (249-288)||(21038323-21038362)
chr6 (115-170)||(33922948-33923003)
chr6 (125-183)||(8417442-8417500)
chr6 (119-165)||(19649292-19649338)
chr6 (219-256)||(2978549-2978586)
chr6 (120-181)||(14553477-14553537)
chr6 (309-345)||(3116168-3116204)
chr6 (304-347)||(16895734-16895778)
chr6 (109-169)||(23930247-23930307)
[»] scaffold0187 (6 HSPs)
scaffold0187 (115-190)||(10148-10223)
scaffold0187 (115-190)||(20476-20551)
scaffold0187 (115-170)||(8905-8960)
scaffold0187 (115-170)||(19233-19288)
scaffold0187 (303-348)||(10086-10129)
scaffold0187 (303-348)||(20414-20457)
[»] scaffold0168 (1 HSPs)
scaffold0168 (115-190)||(30539-30614)
[»] scaffold0049 (2 HSPs)
scaffold0049 (115-220)||(58937-59043)
scaffold0049 (303-340)||(59033-59070)
[»] scaffold0258 (1 HSPs)
scaffold0258 (115-190)||(13123-13198)
[»] scaffold0005 (1 HSPs)
scaffold0005 (115-190)||(226506-226581)
[»] scaffold0223 (1 HSPs)
scaffold0223 (116-190)||(11093-11166)
[»] scaffold0024 (1 HSPs)
scaffold0024 (106-184)||(83826-83904)
[»] scaffold0254 (1 HSPs)
scaffold0254 (123-190)||(4125-4192)
[»] scaffold0057 (2 HSPs)
scaffold0057 (115-170)||(24887-24942)
scaffold0057 (118-190)||(46794-46866)
[»] scaffold1176 (1 HSPs)
scaffold1176 (117-190)||(1685-1758)
[»] scaffold0311 (1 HSPs)
scaffold0311 (118-170)||(10773-10825)
[»] scaffold0116 (1 HSPs)
scaffold0116 (129-190)||(8865-8926)
[»] scaffold0194 (1 HSPs)
scaffold0194 (115-183)||(24624-24692)
[»] scaffold0031 (1 HSPs)
scaffold0031 (123-190)||(43097-43164)
[»] scaffold0242 (1 HSPs)
scaffold0242 (252-304)||(4232-4289)
[»] scaffold0018 (1 HSPs)
scaffold0018 (117-150)||(73001-73034)


Alignment Details
Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 14530278 - 14530384
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||||| | ||||||||||||    
T  14530278 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctac 14530377  T
Q  214 gtacaat 220  Q
    |||||||    
T  14530378 gtacaat 14530384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 12024093 - 12023988
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  12024093 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 12023995  T
Q  214 gtacaat 220  Q
    |||||||    
T  12023994 gtacaat 12023988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 8455491 - 8455385
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||  | |||||||||| |    
T  8455491 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgc 8455392  T
Q  214 gtacaat 220  Q
    |||||||    
T  8455391 gtacaat 8455385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 10543658 - 10543764
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||  ||||||||||  |||||| | |||||| | |||||||||| |    
T  10543658 taaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgc 10543757  T
Q  214 gtacaat 220  Q
    |||||||    
T  10543758 gtacaat 10543764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 11514396 - 11514471
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  11514396 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctctt 11514471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 24200800 - 24200694
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||||  |||||||||||||||||| ||||||| |||||| ||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  24200800 taaccttgatgcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 24200701  T
Q  214 gtacaat 220  Q
    |||||||    
T  24200700 gtacaat 24200694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 17667973 - 17668068
Alignment:
Q  126 caactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 220  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||| |||||||| | |||||| | |||||||||| ||||||||    
T  17667973 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaat 17668068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 21779434 - 21779359
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||  ||||||| ||| ||||||    
T  21779434 taaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctctt 21779359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 23397726 - 23397801
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||  ||||||||||| ||||||    
T  23397726 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctctt 23397801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 25079893 - 25079818
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  || | |||||||||||||    
T  25079893 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctctt 25079818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 249 - 304
Target Start/End: Original strand, 42808528 - 42808583
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 304  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  42808528 tggcccatttctatattcgggcctctcgggcccgggccggcccatttgacacctct 42808583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 9671140 - 9671216
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggct-gaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||| |||||||||||| ||||||| || |||| |||||||||||| |||||||||||| ||||||    
T  9671140 taaccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctctt 9671216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 17623535 - 17623630
Alignment:
Q  126 caactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 220  Q
    ||||||||||||||||| ||||| | ||| |||||||||||||||  |||| ||||||||||||| | |||||| | |||||||||| ||||||||    
T  17623535 caactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaat 17623630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 17896219 - 17896294
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||| ||||||||||||||||||| ||||||| | |||||||||||| ||||  |||| |||||||||||||    
T  17896219 taaccttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctctt 17896294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 5450263 - 5450320
Alignment:
Q  133 taaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||| ||||||| |||||||||||||||||||  ||||||||||||||||||    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctctt 5450320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 22371017 - 22371090
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 188  Q
    |||||||||| ||||||||||||||||| ||||||| |||  ||||||||||||||  ||||||||||| ||||    
T  22371017 taaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctc 22371090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 19977889 - 19977813
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctcttt 191  Q
    ||||||||||| ||||||| |||||||| ||||||| | |||||||||||||||||  | ||||||||| |||||||    
T  19977889 taaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttt 19977813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 25249912 - 25249844
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||||  || ||||||||    
T  25249912 taaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaaca 25249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 17705455 - 17705522
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaac 182  Q
    ||||||||| |||||||||||||||||| ||||||| ||  |||||||||||||||  ||||||||||    
T  17705455 taaccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaac 17705522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 27573581 - 27573628
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtca 162  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 27573628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 40417031 - 40416940
Alignment:
Q  130 tggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 220  Q
    ||||||||||||| ||||||| ||| |||||||||||||||  || ||||||||||||||| |||||||| | ||| ||||||  |||||||    
T  40417031 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaat 40416940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 7214494 - 7214600
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||| ||||| ||||||||||||||||| ||||||| ||||||||||| |||||||  || ||||||||  ||||| | |||||  | |||||||||| |    
T  7214494 taactttggcacaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgc 7214593  T
Q  214 gtacaat 220  Q
    |||||||    
T  7214594 gtacaat 7214600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 10543754 - 10543799
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  10543754 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctg 10543799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 39914475 - 39914406
Alignment:
Q  121 tggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||| |||||||||||||| ||||||| ||| ||||||||||| |||  | ||||||||||||||||    
T  39914475 tggcgcatctggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctctt 39914406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 44521544 - 44521473
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||| ||| |||||||||||||||| ||| ||||||||||||| ||||| ||| ||||||||| |||||    
T  44521544 ccttggcggaac-ggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctctt 44521473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 14544023 - 14544098
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||| || ||| ||  | ||||||||| ||||||    
T  14544023 taaccttggcgcaattggtaaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctctt 14544098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 44604826 - 44604889
Alignment:
Q  127 aactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||| |||||||||| ||||||| ||| |||||||| ||||||  ||||||||||||||||||    
T  44604826 aactgctaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctctt 44604889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 24860157 - 24860087
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctct 189  Q
    |||||||||||||||||| ||||| ||||||| ||| ||||| ||||||| |   ||||||||||||||||    
T  24860157 cttggcgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctct 24860087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 19614981 - 19615058
Alignment:
Q  144 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 220  Q
    ||||||| |||||||||||||||||||  |||| |||||| |||||| |||||||| | ||||||| || ||||||||    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaat 19615058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 24200704 - 24200659
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||    
T  24200704 ctgcgtacaatacaccaaaaatggtgggaacccttcccggaccctg 24200659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 26827039 - 26826982
Alignment:
Q  252 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 304  Q
    |||||||||||||| |||||||||||||||     |||||||||||||||||||||||    
T  26827039 cccatttctatagtcgggcctctcgggcccgggctgggccggcccatttgacacctct 26826982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 32781461 - 32781357
Alignment:
Q  116 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacg 214  Q
    ||||||||||||| |||||||||||||   |||| |||||||||||||| |||||  ||  |||||||||||||| | |||||| | ||||||| || ||    
T  32781461 aaccttggcgcaa-tggtaaagttgttgcaatgttgctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaagactgcg 32781363  T
Q  215 tacaat 220  Q
    ||||||    
T  32781362 tacaat 32781357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 33795261 - 33795350
Alignment:
Q  131 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaa 219  Q
    |||||||||||| ||| |||  ||||||||||||||||||  ||| ||||||||||||||   |||||| | |||||||||| |||||||    
T  33795261 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgtacaa 33795350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 44089183 - 44089236
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacct 302  Q
    |||||||||| |||||| |||||||||||| ||||||| | |||||||||||||    
T  44089183 tggcccatttatatagtcgggcctctcggggccgggccaggccatttgacacct 44089236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 44449463 - 44449419
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||    
T  44449463 ctgcgtacaatacaccaaaa-tagtgggaccccttcccggaccctg 44449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 99434 - 99363
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| | |||||||||| ||| ||| |||||||||||||||||||  |||| |||||| ||||||    
T  99434 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctctt 99363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 5840988 - 5841056
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    ||||||||| |||| || |||||||||| ||||||| ||| |||||||||||||||  |||| ||||||    
T  5840988 taaccttggtgcaaatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaaca 5841056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 10546153 - 10546229
Alignment:
Q  146 atgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tat-aaaaagcggggtaaggctacgtacaat 220  Q
    ||||| |||||||||||||||||||  ||||||||||| |||||| ||| ||||| | |||||||||| ||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaat 10546229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 14530379 - 14530419
Alignment:
Q  308 tacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  14530379 tacaatacaccaataatggtgggaccccttcccggaccctg 14530419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 17380407 - 17380336
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||| |||  |||||||| ||||||| | |||||||||||||||||  || |||||||||||||||    
T  17380407 ccttggcgcaa-tggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctctt 17380336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 31158519 - 31158475
Alignment:
Q  304 tgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||    
T  31158519 tgcatacaataaaccaaaaatggtgggaccccttcccagaccctg 31158475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 39189596 - 39189556
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctga 155  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  39189596 taaccttggcgcaactggtaaagttgttgtcatgtgactga 39189556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 44643486 - 44643537
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||| |||||    
T  44643486 ccttggcgcaa-tggtaaagttgtcatcatgtgactgaaaggtcacgtgttca 44643537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 27466305 - 27466262
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaag 158  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||    
T  27466305 taacattggcgcaactggtaaagttgttgtcatgtgactgaaag 27466262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 29420048 - 29419989
Alignment:
Q  131 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| |||  || ||||||||||||| |||||  ||||||||||||||||||    
T  29420048 ggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctctt 29419989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 39499385 - 39499354
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtg 150  Q
    ||||||||||||||||||||||||||||||||    
T  39499385 cttggcgcaactggtaaagttgttatcatgtg 39499354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 23488544 - 23488582
Alignment:
Q  310 caatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  23488544 caatacacaaaaaatggtgggaccccttcccggaccctg 23488582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 34752820 - 34752762
Alignment:
Q  132 gtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||| ||||||||||||| |||||||||||||  ||||  | ||||||||||||||||    
T  34752820 gtaaacttgttatcatgtgactgaaaggtcacgaattcaagttctggaaacaacctctt 34752762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 38879541 - 38879647
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||||| | |||||||||| |    
T  38879541 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgc 38879640  T
Q  214 gtacaat 220  Q
    |||||||    
T  38879641 gtacaat 38879647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 1565391 - 1565466
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||  ||||||||||||||||||    
T  1565391 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctctt 1565466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 4619281 - 4619175
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||| | |||||| | |||||| | |||||||||| |    
T  4619281 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgc 4619182  T
Q  214 gtacaat 220  Q
    |||||||    
T  4619181 gtacaat 4619175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 41014279 - 41014384
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  41014279 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 41014377  T
Q  214 gtacaat 220  Q
    |||||||    
T  41014378 gtacaat 41014384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 43334162 - 43334235
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 188  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||    
T  43334162 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 43334235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 35710273 - 35710348
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||  ||||||||||| ||||||    
T  35710273 taaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctctt 35710348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 37024729 - 37024654
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  37024729 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 37024654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 24448850 - 24448956
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| ||| || | ||||||   |||||||||| |    
T  24448850 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgc 24448949  T
Q  214 gtacaat 220  Q
    |||||||    
T  24448950 gtacaat 24448956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 8170157 - 8170053
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctttataaaaagcggggtaaggctacg 214  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||||||  ||||||||||| ||| ||| |  ||| | |||||||||| ||    
T  8170157 taaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcct-tttgtgtaaaacagggtaaggctgcg 8170059  T
Q  215 tacaat 220  Q
    ||||||    
T  8170058 tacaat 8170053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 23974741 - 23974815
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||  ||||||||||||||||||    
T  23974741 taaccttggcgcaac-ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctctt 23974815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 27328712 - 27328818
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||| ||||| ||||||||||||| ||||||| |||||||||||| ||||||  |||||||||||  ||||| | |||||| | |||||||||| |    
T  27328712 taaccttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgc 27328811  T
Q  214 gtacaat 220  Q
    |||||||    
T  27328812 gtacaat 27328818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 22600414 - 22600483
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaa 184  Q
    |||||||| || |||||||||||||||||||||||| ||| ||||| |||||||||  ||||||||||||    
T  22600414 taaccttgacgtaactggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaa 22600483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 43334259 - 43334304
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  43334259 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctg 43334304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 39301087 - 39301158
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| |||||||||||| ||||||  |||||||||||||||||||  || ||| |||||||||||    
T  39301087 ccttggcgcaac-ggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctctt 39301158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 22187245 - 22187320
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||| ||||||||||| ||||||||||| |||| || |||||||||||| |||| |  ||||||||||| ||||||    
T  22187245 taactttggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctctt 22187320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 22861841 - 22861786
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    |||||||||| |||||| |||||||||| ||||||| |||||||||||||| ||||    
T  22861841 taaccttggcacaactgataaagttgttgtcatgtgactgaaaggtcacggattca 22861786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 28516593 - 28516534
Alignment:
Q  131 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| ||| |||||||||||||||||||||||  || |||||||| ||||||    
T  28516593 ggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctctt 28516534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 38879637 - 38879682
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||    
T  38879637 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctg 38879682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 39079937 - 39079886
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    |||||||||||| |||||||||||| ||||||| | |||||||||||||||||    
T  39079937 ccttggcgcaac-ggtaaagttgttgtcatgtgacagaaaggtcacgggttca 39079886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 4619185 - 4619142
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||    
T  4619185 ctgcgtacaatacaccaataatggtgggaccccttcccggaccc 4619142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 12006500 - 12006430
Alignment:
Q  120 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac-gggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| | |||||||| ||||||| |||||||||||| ||||||| |  ||||||||||||||||    
T  12006500 ttggcgcaactgctcaagttgttgtcatgtgactgaaaggtcacggggttca-agtctggaaacaacctctt 12006430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 13801848 - 13801805
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||    
T  13801848 ctgcgtacaatacaccaataatggtgggaccccttcccggaccc 13801805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 20135660 - 20135703
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||    
T  20135660 ctgcgtacaatacaccaataatggtgggaccccttcccggaccc 20135703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 31299592 - 31299667
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||| |||||||||||||||||| ||||||| || | |||||||  |||||  |||| |||||| ||||||    
T  31299592 taaccttggtgcaactggtaaagttgttgtcatgtgacttacaggtcactagttcaagtcctagaaacagcctctt 31299667  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 2838738 - 2838788
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctg-aaaggtcacg 164  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||||||||||    
T  2838738 taaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcacg 2838788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 10634317 - 10634248
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 188  Q
    |||||||||||| ||| |||||||| ||| ||| ||||||||||| |||||||  |||| |||||||||||    
T  10634317 ccttggcgcaac-ggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaacctc 10634248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 348
Target Start/End: Complemental strand, 12006406 - 12006364
Alignment:
Q  306 catacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||    
T  12006406 catacaatacaccaataatggtgggaccccttcccagaccctg 12006364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 19438709 - 19438759
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgg 165  Q
    |||||||||||||||||||||||||||| |||| || || |||| ||||||    
T  19438709 taaccttggcgcaactggtaaagttgttgtcatatgactaaaagatcacgg 19438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 32703413 - 32703459
Alignment:
Q  144 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  32703413 tcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 32703459  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 1405170 - 1405231
Alignment:
Q  138 ttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 198  Q
    ||||| ||||||| ||  |||||||||||||||  |||||||||||||||||| ||||||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaacaacctcttatataaaaa 1405231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 11657779 - 11657735
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||||||||||||||||||| | |||||||||||||||| ||||||    
T  11657779 ctgcatacaatacaccaaaa-tggtgggaccccttcccgaaccctg 11657735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 27328808 - 27328853
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||| ||| |||||||||||||||| ||||||    
T  27328808 ctgcgtacaatacaccaataatggtgggaccccttcccgaaccctg 27328853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 30006285 - 30006382
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggct 211  Q
    |||| |||||||||||| |||| ||||| ||||||| |||||||||||  | ||||  ||| | |||||||||||| |||||| | | ||||||||||    
T  30006285 taacattggcgcaactgataaatttgttgtcatgtgactgaaaggtcatagattcaagtccggaaaacaacctcttatataaacaacagggtaaggct 30006382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 34375172 - 34375205
Alignment:
Q  252 cccatttctatagttgggcctctcgggcccgggc 285  Q
    |||||||||||||| |||||||||||||||||||    
T  34375172 cccatttctatagtcgggcctctcgggcccgggc 34375205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 35540634 - 35540667
Alignment:
Q  252 cccatttctatagttgggcctctcgggcccgggc 285  Q
    |||||||||||||| |||||||||||||||||||    
T  35540634 cccatttctatagtcgggcctctcgggcccgggc 35540667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 209098 - 209027
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||| | |||||||||||| ||||||| || |||||||||  |||||  |||||| |||||||||||    
T  209098 ccttggcgcagc-ggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctctt 209027  T

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Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 7136704 - 7136598
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||| |||||||  |||||||||||||||||| | |||||| | |||||||||| |    
T  7136704 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgc 7136605  T
Q  214 gtacaat 220  Q
    |||||||    
T  7136604 gtacaat 7136598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 20869673 - 20869596
Alignment:
Q  113 gataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  20869673 gataaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 20869596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 12670423 - 12670348
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  12670423 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 12670348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 30454270 - 30454195
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  30454270 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 30454195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 28817801 - 28817695
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  28817801 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 28817702  T
Q  214 gtacaat 220  Q
    |||||||    
T  28817701 gtacaat 28817695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 36720756 - 36720862
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  36720756 taaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 36720855  T
Q  214 gtacaat 220  Q
    |||||||    
T  36720856 gtacaat 36720862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 39461171 - 39461065
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||| |||||| | |||||| | | |||||||| |    
T  39461171 taaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgc 39461072  T
Q  214 gtacaat 220  Q
    |||||||    
T  39461071 gtacaat 39461065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 29521860 - 29521754
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||||||||||||| |||||||||| || |||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  29521860 taaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgc 29521761  T
Q  214 gtacaat 220  Q
    |||||||    
T  29521760 gtacaat 29521754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 44530109 - 44530215
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||| | ||||||| ||  |||||||||||||||  || ||||||||||||||| | |||||| | |||||||||| |    
T  44530109 taaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgc 44530208  T
Q  214 gtacaat 220  Q
    |||||||    
T  44530209 gtacaat 44530215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 20284248 - 20284164
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 198  Q
    |||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||||    
T  20284248 taaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 20284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 21070877 - 21070793
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 198  Q
    |||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||||    
T  21070877 taaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 21070793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 28407379 - 28407451
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  28407379 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctt 28407451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 2626479 - 2626554
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||| ||||||||||||| ||||||| | |||||||||||||||||  ||||||||||| ||||||    
T  2626479 taaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctctt 2626554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 17823540 - 17823611
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||||||  ||||||||||| ||||||    
T  17823540 cttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctctt 17823611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 24245411 - 24245478
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaac 182  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||    
T  24245411 taaccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 6760786 - 6760888
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtac 217  Q
    |||||||||||||||||||||||| |||| || ||  |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |||||    
T  6760786 cttggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtac 6760885  T
Q  218 aat 220  Q
    |||    
T  6760886 aat 6760888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 13160662 - 13160767
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||  |||| |||||| |||||| | |||||| | |||||||||| |    
T  13160662 taacctcggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa-cagggtaaggctgc 13160760  T
Q  214 gtacaat 220  Q
    |||||||    
T  13160761 gtacaat 13160767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 22598133 - 22598223
Alignment:
Q  131 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 220  Q
    |||||||||||| |||  || ||||||||||||||||||| ||||||||||||||||||| | |||||| | ||||||||||| |||||||    
T  22598133 ggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaat 22598223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 35261639 - 35261745
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||   ||||||||||  ||||| | |||||| | |||||||| | |    
T  35261639 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgc 35261738  T
Q  214 gtacaat 220  Q
    |||||||    
T  35261739 gtacaat 35261745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 18164930 - 18164859
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||| ||| |||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  18164930 cttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 18164859  T

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Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 8897939 - 8897833
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||| |||| ||||||||||||||||| ||||||| | | ||||||||||||| |  |||||||||||||| ||| | ||||||   ||||||||||||    
T  8897939 taaccctggcacaactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctac 8897840  T
Q  214 gtacaat 220  Q
    |||||||    
T  8897839 gtacaat 8897833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 25250474 - 25250550
Alignment:
Q  107 atgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||| ||| ||||||||  |||||  |||||||||||    
T  25250474 atgagaggtaaccttggcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaaca 25250550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 35105902 - 35105958
Alignment:
Q  134 aaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||| ||| |||||||||||||||||||||||  ||||||||||||||||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctctt 35105958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 44781677 - 44781606
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| |||||||||||| ||| ||| ||||||| |||||||||||  ||||||||||||||||||    
T  44781677 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctctt 44781606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 45071225 - 45071330
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||  ||||||||||||||| |||||||  || |||||||||||||||  | ||||||||| |||||| | |||||| | |||||||||| |    
T  45071225 taaccttggcgatactggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 45071323  T
Q  214 gtacaat 220  Q
    |||||||    
T  45071324 gtacaat 45071330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 31457155 - 31457208
Alignment:
Q  137 gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||| |||||||||||||||||||||||||||  ||||| ||||||||||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctctt 31457208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 304
Target Start/End: Original strand, 37698567 - 37698620
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 304  Q
    ||||||||||||||||| |||||||  ||| |||||||||||||||||||||||||    
T  37698567 tggcccatttctatagtcgggcctc--ggggccgggccggcccatttgacacctct 37698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 11748259 - 11748353
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc-tttataaaaagcggggtaag 208  Q
    |||| |||| ||||||||| || ||||| ||||||| |||||| ||||||||||||  || |||||||| |||| ||| |||||||| |||||||    
T  11748259 taactttggtgcaactggtgaaattgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggtaag 11748353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 20284150 - 20284105
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||    
T  20284150 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctg 20284105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 21070778 - 21070733
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||    
T  21070778 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctg 21070733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 42083870 - 42083806
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||||| |||||| ||||| ||| ||| |||||||||||||||||||  |||||||||||    
T  42083870 ccttggcgcaac-ggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaaca 42083806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 18405319 - 18405374
Alignment:
Q  251 gcccatttctatagttgggcctctcgggcccgggccggc--ccatttgacacctct 304  Q
    ||||||||||||||| |||||||||||||| | ||||||  |||||||||||||||    
T  18405319 gcccatttctatagtcgggcctctcgggcctgagccggcggccatttgacacctct 18405374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 304
Target Start/End: Original strand, 27127153 - 27127213
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 304  Q
    ||||||||||||||||| |||||||||||||     |||||| ||||||||||||||||||    
T  27127153 tggcccatttctatagtcgggcctctcgggcttgggccgggctggcccatttgacacctct 27127213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 31454152 - 31454216
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    ||||||||||| |||| ||||||| |||||||| |||||||||||  |||||| ||||| |||||    
T  31454152 cttggcgcaaccggtatagttgttgtcatgtggttgaaaggtcacatgttcatgtcctgaaaaca 31454216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 7136608 - 7136565
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||    
T  7136608 ctgcgtacaatacaccaataatggtgggaccccttcccggaccc 7136565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 26954092 - 26954167
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||| |||||| || ||||||||||||| |||||||  |  |||||||||||||||  ||||||||||| ||||||    
T  26954092 taactttggcgtaattggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctctt 26954167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 12625858 - 12625924
Alignment:
Q  124 cgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||||||| || |||| ||   |||||||||| |||  ||||||||||||||||||    
T  12625858 cgcaactggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctctt 12625924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 30232764 - 30232820
Alignment:
Q  252 cccatttctatagttgggcctctcgggcccgggccggcccatttgacacctctgcata 309  Q
    ||||||| | ||||||||||||||| ||| ||||| ||||||||||||||||| ||||    
T  30232764 cccatttatgtagttgggcctctcgagcc-gggccagcccatttgacacctctacata 30232820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 39461075 - 39461030
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||| ||| ||| |||||||||||||||||||    
T  39461075 ctgcgtacaatacaccaataatggtgagaccccttcccggaccctg 39461030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 43942380 - 43942417
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttccc 340  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  43942380 ctgcgtacaatacaccaaaaatggtgggaccccttccc 43942417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 44598998 - 44598941
Alignment:
Q  252 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 304  Q
    |||||||||||||| |||||||||||| ||     |||||||||||||||||||||||    
T  44598998 cccatttctatagtcgggcctctcgggtccgggctgggccggcccatttgacacctct 44598941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 10730432 - 10730468
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggcccgggc 285  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  10730432 tggcccatttctatagtcgggcctctcggacccgggc 10730468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 11001109 - 11001053
Alignment:
Q  131 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacct 187  Q
    |||||||||||| |||||||  ||||||||| |||||||| || ||| |||||||||    
T  11001109 ggtaaagttgttgtcatgtgattgaaaggtcgcgggttcaaattctgaaaacaacct 11001053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 30962944 - 30962873
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| || ||||||||| |||||||  ||||||||||||  ||||  ||||||||||| ||||||    
T  30962944 ccttggcgcaac-ggaaaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctctt 30962873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 6e-25; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 46354154 - 46354260
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| |||||||  || |||||||||||||||  |||||||||||||||||| | |||||| | |||||||||| |    
T  46354154 taaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgc 46354253  T
Q  214 gtacaat 220  Q
    |||||||    
T  46354254 gtacaat 46354260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 11617762 - 11617657
Alignment:
Q  116 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacg 214  Q
    ||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||||  |||||||||||||||||| | |||||| | ||||||| || ||    
T  11617762 aacctcggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcg 11617663  T
Q  215 tacaat 220  Q
    ||||||    
T  11617662 tacaat 11617657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 42496019 - 42495926
Alignment:
Q  106 catgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 198  Q
    |||||| | |||||||||||||||||||||||||||| |||| || |||||||||||||||||||  ||||||||||| |||||| ||||||||    
T  42496019 catgaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 42495926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 2541195 - 2541091
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggct-gaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggcta 212  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||||||||||  ||||||||||| |||||| | |||||| | ||||||||||     
T  2541195 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 2541096  T
Q  213 cgtac 217  Q
    |||||    
T  2541095 cgtac 2541091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 47078028 - 47077960
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||||    
T  47078028 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47077960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 48735296 - 48735220
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcc-tggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  48735296 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctctt 48735220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 21172182 - 21172107
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||  ||||||||||| ||||||    
T  21172182 taaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctctt 21172107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 32758221 - 32758296
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  32758221 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctt 32758296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 10693245 - 10693171
Alignment:
Q  116 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  10693245 aaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 10693171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 35334999 - 35334921
Alignment:
Q  105 tcatgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||  |||||||||||    
T  35334999 tcatgagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaaca 35334921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 42805484 - 42805590
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | ||||||||||      
T  42805484 taaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgt 42805583  T
Q  214 gtacaat 220  Q
    |||||||    
T  42805584 gtacaat 42805590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 43557432 - 43557538
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||  ||||||||||| |||||| | |||||| | | |||||||| |    
T  43557432 taaccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgc 43557531  T
Q  214 gtacaat 220  Q
    |||||||    
T  43557532 gtacaat 43557538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 7193045 - 7193120
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||  |||| |||||||||||||    
T  7193045 taaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctctt 7193120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 19427059 - 19426989
Alignment:
Q  120 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||||||||  ||||||||||| ||||||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctctt 19426989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 42798629 - 42798735
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  || ||||||||  ||||| | |||||| |  ||||||||| |    
T  42798629 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgc 42798728  T
Q  214 gtacaat 220  Q
    |||||||    
T  42798729 gtacaat 42798735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 47716419 - 47716525
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||| ||||||| |||||||||  |||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  47716419 taaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 47716518  T
Q  214 gtacaat 220  Q
    |||||||    
T  47716519 gtacaat 47716525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 14732997 - 14732924
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 188  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||  ||||||||||| ||||    
T  14732997 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctc 14732924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 27629596 - 27629669
Alignment:
Q  117 accttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||| |||| || | |||||||||||||||||  ||||||||||| ||||||    
T  27629596 accttggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctctt 27629669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 48123655 - 48123584
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| |||||||  ||||||||||| ||||||    
T  48123655 ccttggcgcaac-ggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctctt 48123584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 5180332 - 5180257
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||  | ||||||||| ||||||    
T  5180332 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctctt 5180257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 7794681 - 7794606
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||| |||||||||||||||||||| | ||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  7794681 taaccttagcgcaactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctctt 7794606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 18326994 - 18327069
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||  ||| ||||||| ||||||    
T  18326994 taaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctctt 18327069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 33872070 - 33872009
Alignment:
Q  129 ctggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||| ||||||| |||||||||| ||||||||  ||||||||||||||||||    
T  33872070 ctggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctctt 33872009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 1424085 - 1424017
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||| ||||||||||||||||||||||| | ||||| ||| |||||||||| |||| ||||||||||||    
T  1424085 taactttggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaaca 1424017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 12473267 - 12473339
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| |||||||||||| ||||||  ||||||||||| |||||||  ||||| ||||||||||||    
T  12473267 ccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctctt 12473339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 40463836 - 40463892
Alignment:
Q  114 ataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    |||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||    
T  40463836 ataaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaggtcacgggttca 40463892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 28362316 - 28362214
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgta 216  Q
    |||||||||||| |||||||||||| |||||||||||||||||||| ||||||  |||| |||||  |||||| | |||||| |  ||||||||| ||||    
T  28362316 ccttggcgcaac-ggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaaggctgcgta 28362218  T
Q  217 caat 220  Q
    ||||    
T  28362217 caat 28362214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 16341254 - 16341344
Alignment:
Q  131 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 220  Q
    |||||||||||||||||||   ||||||||||||||||||  | || |||||| |||||| | |||||| | |||||||||||||||||||    
T  16341254 ggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggctacgtacaat 16341344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 22699145 - 22699079
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaa 181  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||| | |||||||  |||||||||    
T  22699145 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaa 22699079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 13805066 - 13805128
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaa 181  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||  |||||||||    
T  13805066 ccttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaa 13805128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 34626382 - 34626309
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 188  Q
    ||||||| |||||||||||||||||||| |||||||  ||||||| ||| | ||||  ||||||||||| ||||    
T  34626382 taaccttagcgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctc 34626309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 348
Target Start/End: Original strand, 39123957 - 39123994
Alignment:
Q  311 aatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||||||||||||| |||||||||||||||||||||||    
T  39123957 aatacaccaaaaatggtgggaccccttcccggaccctg 39123994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 28078306 - 28078238
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    ||||| |||||||||| || |||||||| ||||||| ||| |||||||||||||||  |||| ||||||    
T  28078306 taaccctggcgcaactcgtgaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 28078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 29140531 - 29140487
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac 163  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||    
T  29140531 cttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcac 29140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 42476833 - 42476901
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||| |||||| |||||||||||||||| ||||||| || ||||||||||| ||||  | |||||||||    
T  42476833 taacattggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaaca 42476901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 6736867 - 6736934
Alignment:
Q  132 gtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 198  Q
    ||||||||||| ||||| | |||||||||||||||||||  ||||  |||||||||||| ||||||||    
T  6736867 gtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaa 6736934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 46354250 - 46354293
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||    
T  46354250 ctgcgtacaatacaccaataatggtgggaccccttcccggaccc 46354293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 47716515 - 47716558
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||    
T  47716515 ctgcgtacaatacaccaataatggtgggaccccttcccggaccc 47716558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 19265781 - 19265830
Alignment:
Q  120 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    |||||||||| |||||||||||| ||| ||| |||||||||||||||||||    
T  19265781 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttca 19265830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 29907393 - 29907454
Alignment:
Q  131 ggtaaagttgtt--atcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||  |||||||| |||||||||||||||||||  |||| |||||| ||||||    
T  29907393 ggtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctctt 29907454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 42391251 - 42391205
Alignment:
Q  137 gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||| ||||||| |||||||||||||||||||  |||||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 42391205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 346
Target Start/End: Original strand, 42805585 - 42805623
Alignment:
Q  308 tacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  42805585 tacaatacaccaataatggtgggaccccttcccggaccc 42805623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 3469350 - 3469306
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac 163  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||    
T  3469350 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcac 3469306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 33500569 - 33500614
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||| |||||| |||||| |||||||||||||||||||||||    
T  33500569 ctgcgtactatacacaaaaaatggtgggaccccttcccggaccctg 33500614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 7644931 - 7644991
Alignment:
Q  130 tggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||| ||||| | | ||| |||||||||||||||||||  ||||||||||| ||||||    
T  7644931 tggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 7644991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 31591247 - 31591207
Alignment:
Q  150 ggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||| |||||  ||||||||||||||||||    
T  31591247 ggctgaaaggtcacgagttcaagtcctggaaacaacctctt 31591207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 281
Target Start/End: Original strand, 45261872 - 45261904
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggccc 281  Q
    ||||||||||||||||| |||||||||||||||    
T  45261872 tggcccatttctatagtcgggcctctcgggccc 45261904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 8247864 - 8247758
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||| | |    
T  8247864 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgc 8247765  T
Q  214 gtacaat 220  Q
    |||||||    
T  8247764 gtacaat 8247758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 29366897 - 29366791
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||||||| |||||||||||||||| ||||||| || ||||||||||||||||  ||||||||||| |||||| |||||||| | |||||||||| |    
T  29366897 taaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgc 29366798  T
Q  214 gtacaat 220  Q
    |||||||    
T  29366797 gtacaat 29366791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 40272987 - 40272881
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||| |||||||  |||||||||||||||||| | |||||| | |||||||||| |    
T  40272987 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgc 40272888  T
Q  214 gtacaat 220  Q
    |||||||    
T  40272887 gtacaat 40272881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 46421212 - 46421106
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  46421212 taaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 46421113  T
Q  214 gtacaat 220  Q
    |||||||    
T  46421112 gtacaat 46421106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 10870126 - 10870051
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  10870126 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 10870051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 13730779 - 13730673
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | ||||||||||      
T  13730779 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgt 13730680  T
Q  214 gtacaat 220  Q
    |||||||    
T  13730679 gtacaat 13730673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 52926385 - 52926310
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  52926385 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctt 52926310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 5173896 - 5173820
Alignment:
Q  115 taaccttggcgcaactggtaaa-gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||  ||||||||||||||||||    
T  5173896 taaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 5173820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 7697060 - 7696992
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||||||||||||  |||||||||||    
T  7697060 taaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaaca 7696992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 1217072 - 1217147
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||  ||||||||||| ||||||    
T  1217072 taaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctctt 1217147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 13628968 - 13628861
Alignment:
Q  115 taaccttggcgcaactggtaaa-gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggcta 212  Q
    |||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | ||| || | ||||||||||     
T  13628968 taaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctg 13628869  T
Q  213 cgtacaat 220  Q
    ||||||||    
T  13628868 cgtacaat 13628861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 16735423 - 16735528
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| ||| || ||||||||||||  |||| |||||| |||||| || ||||| | |||||||||| |    
T  16735423 taaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgtagaaaaa-cagggtaaggctgc 16735521  T
Q  214 gtacaat 220  Q
    |||||||    
T  16735522 gtacaat 16735528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 35417902 - 35417973
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| |||||||||||||||||||| |||| |||||||| ||||| |||||||||||| ||||||    
T  35417902 ccttggcgcaac-ggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctctt 35417973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 9607185 - 9607260
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||||  ||||||  ||||||||||| ||||||    
T  9607185 taaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctctt 9607260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 26573113 - 26573215
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacct-ctttataaaaagcggggtaaggctacgta 216  Q
    |||||||||||| |||||||||||| ||| ||| |||||||||||||||||||  ||||||||||| ||| || | |||||| | |||||||||| ||||    
T  26573113 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgta 26573211  T
Q  217 caat 220  Q
    ||||    
T  26573212 caat 26573215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 26869696 - 26869763
Alignment:
Q  122 ggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctct 189  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| |||||    
T  26869696 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctct 26869763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 4495839 - 4495733
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||| ||| | ||| || | |||||| | |||||||||| |    
T  4495839 taaccttcgcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgc 4495740  T
Q  214 gtacaat 220  Q
    |||||||    
T  4495739 gtacaat 4495733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 12914210 - 12914104
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| | ||||| | ||||||||||  |||||  ||||||||||| |||||| | |||||| | |||||||||  |    
T  12914210 taaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggc 12914111  T
Q  214 gtacaat 220  Q
    |||||||    
T  12914110 gtacaat 12914104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 22123090 - 22123022
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||||| ||||||||| ||||| ||||||| |||||||||| ||||||||  |||||||||||    
T  22123090 taaccttggcgccactggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaaca 22123022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 34420815 - 34420716
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgta 216  Q
    |||||||||||| | |||||||||| ||| ||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| ||||    
T  34420815 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 34420717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 9144865 - 9144810
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 304  Q
    ||||||||||||||||   |||||||||||| ||||||||||||||||||||||||    
T  9144865 tggcccatttctataggcaggcctctcgggctcgggccggcccatttgacacctct 9144810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 39203498 - 39203573
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||| ||||| ||||||||||| ||||||| |||||||||||| ||||||  |||| |||||| ||||||    
T  39203498 taaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctctt 39203573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 22609749 - 22609853
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||||| |||||||||  || |||||||| |||||| | |||||| | |||||||||| |    
T  22609749 taaccttggcgcaac-ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 22609846  T
Q  214 gtacaat 220  Q
    |||||||    
T  22609847 gtacaat 22609853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 25517350 - 25517300
Alignment:
Q  113 gataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac 163  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  25517350 gataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcac 25517300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 45786295 - 45786250
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  45786295 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctg 45786250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 45621000 - 45620929
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| |||||||||||| ||| ||| |||||||||||||||||||  | ||||||||| ||||||    
T  45621000 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctctt 45620929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 50462768 - 50462708
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 304  Q
    ||||||||||||||||| |||||||||||||     |||||||||||||||||||||||||    
T  50462768 tggcccatttctatagtcgggcctctcgggcttgggccgggccggcccatttgacacctct 50462708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 12525392 - 12525486
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggct 211  Q
    ||||||||||||||||||||||||||   |||| || |||||||||||| |||||   ||||||||||| |||||| | |||||| | ||||||||||    
T  12525392 taaccttggcgcaactggtaaagttg---tcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggtaaggct 12525486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 6411996 - 6411891
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||| ||||||||||||||||||| ||||||  |||| |||||| |||||||  || || ||||| |||||| | |||||| | |||||||||| |    
T  6411996 taaccttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaa-cagggtaaggctgc 6411898  T
Q  214 gtacaat 220  Q
    |||||||    
T  6411897 gtacaat 6411891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 45139557 - 45139515
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggacc 345  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  45139557 ctgcatacaatacaccaaaaatggtgggaccccttcccagacc 45139515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 516420 - 516497
Alignment:
Q  144 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 220  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| || |||||    
T  516420 tcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaat 516497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 10795504 - 10795459
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||||||| |||||||||||||| ||||||||    
T  10795504 ctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctg 10795459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 13628871 - 13628826
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||    
T  13628871 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctg 13628826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 29322878 - 29322821
Alignment:
Q  252 cccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 304  Q
    |||||||||||||| |||||||||||||     |||||||||||||||||||||||||    
T  29322878 cccatttctatagtcgggcctctcgggcttgggccgggccggcccatttgacacctct 29322821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 29366801 - 29366756
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||    
T  29366801 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctg 29366756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 45949012 - 45948938
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaa---aggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| ||| |||||||| ||||||| |||||   ||||||||||||||  ||||||||||||||||||    
T  45949012 ccttggcgcaac-ggtgaagttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctctt 45948938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 46421116 - 46421071
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||    
T  46421116 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctg 46421071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 53062036 - 53062093
Alignment:
Q  131 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 188  Q
    |||||||||||| ||||||| ||||||||||||| |||||  ||||||||||| ||||    
T  53062036 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctc 53062093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 54032705 - 54032628
Alignment:
Q  144 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 220  Q
    ||||||| ||| |||||||||||||||  |||||||||||||||||| | |||||| | |||||||||| | ||||||    
T  54032705 tcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaat 54032628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 353430 - 353387
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||    
T  353430 ctgcgtacaatacaccaataatggtgggaccccttcccggaccc 353387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 30928302 - 30928247
Alignment:
Q  135 aagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||| || ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 30928247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 49013554 - 49013511
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||    
T  49013554 ctgcgtacaatacaccaataatggtgggaccccttcccggaccc 49013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 53996737 - 53996635
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgta 216  Q
    ||||||||| || |||||| ||||| |||| || ||||||||||||| |||||  || ||||||||||||||| | |||||| | |||||||||| | ||    
T  53996737 ccttggcgctac-ggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgctta 53996639  T
Q  217 caat 220  Q
    ||||    
T  53996638 caat 53996635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 346
Target Start/End: Complemental strand, 13730678 - 13730640
Alignment:
Q  308 tacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  13730678 tacaatacaccaataatggtgggaccccttcccggaccc 13730640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 5173799 - 5173758
Alignment:
Q  304 tgcatacaatacaccaaaaatagtgggaccccttcccggacc 345  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||    
T  5173799 tgcatgcaatacaccaaaaatggtggggccccttcccggacc 5173758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 21875002 - 21875070
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||| ||||||||||||||||||| ||||||| |||       ||||||||| || ||||||||||||||||    
T  21875002 taaccttgacgcaactggtaaagttgttgtcatgtgactg-------acgggttcaaattctggaaacaacctctt 21875070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 8247763 - 8247723
Alignment:
Q  308 tacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    ||||||||||||| ||| ||||||| |||||||||||||||    
T  8247763 tacaatacaccaataatggtgggactccttcccggaccctg 8247723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 25944455 - 25944518
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaac 182  Q
    |||||||||||| | |||||||||| ||| ||| ||||||||||| |||||||  ||||||||||    
T  25944455 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaac 25944518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 31372521 - 31372465
Alignment:
Q  253 ccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 304  Q
    ||||||||||||| ||||||||||| |     |||||||||||||||||||||||||    
T  31372521 ccatttctatagtcgggcctctcggacccgagccgggccggcccatttgacacctct 31372465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 55140549 - 55140585
Alignment:
Q  252 cccatttctatagttgggcctctcgggcccgggccgg 288  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  55140549 cccatttctatagtcgggcctctcggacccgggccgg 55140585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 20224944 - 20225019
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||  ||||||||||||||||||    
T  20224944 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctctt 20225019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 48598998 - 48598923
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  48598998 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 48598923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 5648219 - 5648324
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  5648219 taaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 5648317  T
Q  214 gtacaat 220  Q
    |||||||    
T  5648318 gtacaat 5648324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 6430800 - 6430695
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  || |||||||| |||||| | |||||| | |||||||||| |    
T  6430800 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 6430702  T
Q  214 gtacaat 220  Q
    |||||||    
T  6430701 gtacaat 6430695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 16408777 - 16408672
Alignment:
Q  116 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacg 214  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | ||||||| || ||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcg 16408678  T
Q  215 tacaat 220  Q
    ||||||    
T  16408677 tacaat 16408672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 21646922 - 21647030
Alignment:
Q  113 gataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggct 211  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||||  ||||||||||| |||||| | ||||||   ||||||||||    
T  21646922 gataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggct 21647021  T
Q  212 acgtacaat 220  Q
     ||||||||    
T  21647022 gcgtacaat 21647030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 5306838 - 5306763
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||| | ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  5306838 taaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 5306763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 17315473 - 17315398
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||  |||| |||||||||||||    
T  17315473 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctctt 17315398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 16911522 - 16911628
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||||||||||||  |||| |||||| |||||| | || ||| | |||||||||| |    
T  16911522 taaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgc 16911621  T
Q  214 gtacaat 220  Q
    |||||||    
T  16911622 gtacaat 16911628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 10660364 - 10660439
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||| ||  |||||  ||||||||||||||||||    
T  10660364 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctctt 10660439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 10874509 - 10874584
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||| ||  |||||  ||||||||||||||||||    
T  10874509 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctctt 10874584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 14590797 - 14590872
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||  |||| |||||| ||||||    
T  14590797 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctctt 14590872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 23501753 - 23501808
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  23501753 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttca 23501808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 47528703 - 47528628
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  47528703 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctt 47528628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 30639340 - 30639445
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| || |||| |||||||||||| ||||||  |||||||||||  ||||| | |||||| | |||||||||| |    
T  30639340 taaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaa-cagggtaaggctgc 30639438  T
Q  214 gtacaat 220  Q
    |||||||    
T  30639439 gtacaat 30639445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 11054321 - 11054253
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||| |||||    
T  11054321 taactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaaca 11054253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 37494811 - 37494886
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||| ||||||||||||||||||  |||| | |||||||||||| ||||||  ||||||||||||||||||    
T  37494811 taaccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctctt 37494886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 487306 - 487235
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||| ||| |||||||||||| ||||||| |||||||||||||||||||  || |||||||||||||||    
T  487306 ccttggcgtaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctctt 487235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 5313169 - 5313101
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    ||||||||||| |||||||||||||||| |||||||  ||||||||||||||||||  ||||| |||||    
T  5313169 taaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaattcctgaaaaca 5313101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 19027823 - 19027914
Alignment:
Q  130 tggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 220  Q
    ||||| ||||||| ||| ||| |||||||||||||||||||  ||||||||||||| |||| | |||||| | |||||||||| ||||||||    
T  19027823 tggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaat 19027914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 30352766 - 30352691
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||| ||| | |||||||||||||||    ||||||||||| ||||||    
T  30352766 taaccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctctt 30352691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9462083 - 9462129
Alignment:
Q  1 ctattaaacaagcgttcatttctagtccgccaaatagaccaaacaag 47  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  9462083 ctattaaacaagtgttcatttctaatccgccaaatagaccaaacaag 9462129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 42164317 - 42164248
Alignment:
Q  120 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||| |||||| ||||| ||||||| |||||||||||||||||||  || |||||||||||||||    
T  42164317 ttggcgcaac-ggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctctt 42164248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 49268805 - 49268746
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggc----ccgggccggcccatttgacacctct 304  Q
    ||||||||||||||||| |||||||||||||    |||||||||||||||||||||||||    
T  49268805 tggcccatttctatagtcgggcctctcgggctaggccgggccggcccatttgacacctct 49268746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 54640510 - 54640439
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| |||||| ||||| ||| |||||||||||||||||||||||  || |||||||| ||||||    
T  54640510 ccttggcgcaac-ggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctctt 54640439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 20405053 - 20405104
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacggg 166  Q
    |||||||| ||||||||||||||||||| ||||||| ||| |||||||||||    
T  20405053 taaccttgacgcaactggtaaagttgttgtcatgtgactggaaggtcacggg 20405104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 43035224 - 43035283
Alignment:
Q  131 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| ||| ||| |||||||||||||||||||  ||| ||||||||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctctt 43035283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 25463111 - 25463157
Alignment:
Q  144 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||    
T  25463111 tcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 25463157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 32629436 - 32629368
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| |||||||||||   |||||| ||||||||||||||||||| ||||| |||||| ||||||    
T  32629436 ccttggcgcaac-ggtaaagttgt---catgtgactgaaaggtcacgggttcaaatcctcgaaacagcctctt 32629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 40915802 - 40915864
Alignment:
Q  128 actggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||| ||||||| ||  |||||||||||||||  ||||||||||| ||||||    
T  40915802 actggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctctt 40915864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 41018945 - 41018863
Alignment:
Q  138 ttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctttataaaaagcggggtaaggctacgtacaat 220  Q
    ||||| ||| ||| |||||||||||||||||||  ||||||||||||||||||    ||||   |||||||||||||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaattagggtaaggctacgtacaat 41018863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 54966983 - 54967056
Alignment:
Q  116 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||||  |||||  | ||||||| ||||||||    
T  54966983 aaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctctt 54967056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 16494273 - 16494318
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||    
T  16494273 ctgcatacaatacaccaaaaatggtgggaccctttcccagaccctg 16494318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 16911618 - 16911663
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||    
T  16911618 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctg 16911663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 28972588 - 28972531
Alignment:
Q  252 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 304  Q
    |||||||||||||| |||||||||||||||     |||||||||||||||||||||||    
T  28972588 cccatttctatagtcgggcctctcgggcccgggctgggccggcccatttgacacctct 28972531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 30352661 - 30352616
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||||    
T  30352661 ctgcgtacaatacaccaaaaatggtgggaccccttctcggaccctg 30352616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 33836564 - 33836523
Alignment:
Q  307 atacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  33836564 atacaatacaccaataatggtgggaccccttcccggaccctg 33836523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 1763429 - 1763369
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 304  Q
    ||||||||||| ||||| |||||||||||||     |||||||||||||||||||||||||    
T  1763429 tggcccatttcaatagtcgggcctctcgggcccgagccgggccggcccatttgacacctct 1763369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 13256572 - 13256508
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctgga 179  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||  ||||||  |||||||    
T  13256572 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcataggttcaagtcctgga 13256508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 23501848 - 23501888
Alignment:
Q  308 tacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  23501848 tacaatacaccaataatggtgggaccccttcccggaccctg 23501888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 44363294 - 44363234
Alignment:
Q  128 actggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 188  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||  ||||| ||||| ||||    
T  44363294 actggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctc 44363234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 6377622 - 6377661
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggcccgggccgg 288  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  6377622 tggcccatttctatagtcgggcctctcgggcccgagccgg 6377661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 13256480 - 13256437
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||    
T  13256480 ctgcgtacaatacaccaataatagtgggaccccttcccgaaccc 13256437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 150
Target Start/End: Original strand, 18969701 - 18969736
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtg 150  Q
    |||||||||||||||||||||||||||| |||||||    
T  18969701 taaccttggcgcaactggtaaagttgttgtcatgtg 18969736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 20225130 - 20225173
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||    
T  20225130 ctgcgtacaatacaccaataatggtgggaccccttcccggaccc 20225173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 28185587 - 28185626
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggcccgggccgg 288  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  28185587 tggcccatttctatagtcgggcctctcgggcccgagccgg 28185626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 30496491 - 30496420
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||  ||||||||| ||| ||| ||||||||||||| |||||  || |||||||| ||||||    
T  30496491 cttggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctctt 30496420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 54730209 - 54730284
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||| |||||||||  |||||||||||| ||||||| |  ||||||||||||||||  |||| |||||| ||||||    
T  54730209 taactttggcgcaatcggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctctt 54730284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 55766641 - 55766590
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacggg 166  Q
    |||||||| ||||||||||||||||||| ||||||| | | |||||||||||    
T  55766641 taaccttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcacggg 55766590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 8473790 - 8473720
Alignment:
Q  120 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||||||||||| |||| || | | |||||  ||||||||  ||||||||||| ||||||    
T  8473790 ttggcgcaactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctctt 8473720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 17043549 - 17043463
Alignment:
Q  135 aagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 220  Q
    |||||||| ||| ||| |||||||||||| ||||||  ||||||||||| |||||| | |||||  | |||||||||| ||||||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaat 17043463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 39077948 - 39077894
Alignment:
Q  136 agttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||| |||||||  ||||||||||||||||||  ||||||||||| ||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctctt 39077894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 12257764 - 12257700
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    ||||| |||||| |||||||||||| ||| |||  |||||||||||||||||| ||||| ||||||    
T  12257764 ccttgacgcaac-ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaaca 12257700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 20639738 - 20639694
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||||| | |||||||||||||||||||||||    
T  20639738 ctgcgtacaatacaccaaaa-tggtgggaccccttcccggaccctg 20639694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 44363199 - 44363166
Alignment:
Q  315 caccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||||||||| |||||||||||||||||||||||    
T  44363199 caccaaaaatggtgggaccccttcccggaccctg 44363166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 49938759 - 49938690
Alignment:
Q  121 tggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||| |  ||||||||| ||| ||| |||||||||||| ||||||  ||||||||||| ||||||    
T  49938759 tggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctctt 49938690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 28185042 - 28185086
Alignment:
Q  212 acgtacaattagagctgtcaaaaatgagccggtccattggcccat 256  Q
    ||||| || ||||||||||||||||| ||||| ||||||||||||    
T  28185042 acgtagaagtagagctgtcaaaaatgggccggcccattggcccat 28185086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 30581540 - 30581501
Alignment:
Q  308 tacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  30581540 tacaatacaccaaaa-tggtgggaccccttcccggaccctg 30581501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 32478942 - 32478886
Alignment:
Q  133 taaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctct 189  Q
    |||||||||| ||||||| | || ||||||| ||||||  |||||||||||||||||    
T  32478942 taaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctct 32478886  T

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Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 348
Target Start/End: Complemental strand, 47482918 - 47482886
Alignment:
Q  316 accaaaaatagtgggaccccttcccggaccctg 348  Q
    ||||||||| |||||||||||||||||||||||    
T  47482918 accaaaaatggtgggaccccttcccggaccctg 47482886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 34725271 - 34725196
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  34725271 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 34725196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 18944626 - 18944732
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||   |||||||||| |||||| | |||||| | |||||||||| |    
T  18944626 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 18944725  T
Q  214 gtacaat 220  Q
    |||||||    
T  18944726 gtacaat 18944732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 30395903 - 30395797
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 30395804  T
Q  214 gtacaat 220  Q
    |||||||    
T  30395803 gtacaat 30395797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 32632731 - 32632626
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| |||| || |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  32632731 taaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 32632633  T
Q  214 gtacaat 220  Q
    |||||||    
T  32632632 gtacaat 32632626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 46991787 - 46991893
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||  |||||||||||||||||| | |||||| | ||||||||||      
T  46991787 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgt 46991886  T
Q  214 gtacaat 220  Q
    |||||||    
T  46991887 gtacaat 46991893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 22930242 - 22930174
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||  |||||||||||    
T  22930242 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaaca 22930174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 47214494 - 47214562
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||||    
T  47214494 taactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47214562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 14617021 - 14617096
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||  ||||||||||| ||||||    
T  14617021 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctctt 14617096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 18724715 - 18724614
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtac 217  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | ||||||||||  ||||    
T  18724715 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtac 18724617  T
Q  218 aat 220  Q
    |||    
T  18724616 aat 18724614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 20004267 - 20004193
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctct 189  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||    
T  20004267 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctct 20004193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 46248128 - 46248022
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||| ||||||||||||||||| ||||||| |||||| ||||||||||||  || |||||||| |||||| | |||||| | ||||||| || |    
T  46248128 taaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgc 46248029  T
Q  214 gtacaat 220  Q
    |||||||    
T  46248028 gtacaat 46248022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 9939443 - 9939519
Alignment:
Q  115 taaccttggcgcaactggtaaa-gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||| |||||| |||||| ||||||| ||||||||||||| |||||  ||||||||||||||||||    
T  9939443 taaccttggcgcaaccggtaaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctctt 9939519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 19932925 - 19932824
Alignment:
Q  117 accttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctttataaaaagcggggtaaggctacgta 216  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||  |  |||| ||||||| | | |||||| | |||||||||| ||||    
T  19932925 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt--tggatacaacctttgtgtaaaaaacagggtaaggctgcgta 19932828  T
Q  217 caat 220  Q
    ||||    
T  19932827 caat 19932824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 34714606 - 34714674
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||  || ||||||||    
T  34714606 taaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaaca 34714674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 18742136 - 18742081
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  18742136 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttca 18742081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 20036208 - 20036278
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||||||  |||||||||||| |||||    
T  20036208 cttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactctt 20036278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 38478455 - 38478380
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||  |||| |||||| ||||||    
T  38478455 taaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctctt 38478380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 40424725 - 40424780
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  40424725 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttca 40424780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 22327086 - 22327179
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggct 211  Q
    |||||||||||| || ||||||||| ||||||| |||||||||| ||||||||  |||||||||||||||||| | |||||| | ||||||||||    
T  22327086 ccttggcgcaac-ggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggct 22327179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 23768495 - 23768389
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||| | ||||||||||||||||||| ||||||| ||| |||||||| ||||||  || |||||||| |||||| | |||||| | |||||||||| |    
T  23768495 taacctcgacgcaactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgc 23768396  T
Q  214 gtacaat 220  Q
    |||||||    
T  23768395 gtacaat 23768389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 41319981 - 41319875
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||| | ||||||||||||||||| ||||||| |||||||||||| |||| |  |||||||||||  ||||| | |||||| | |||||||||| |    
T  41319981 taaccttgacacaactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgc 41319882  T
Q  214 gtacaat 220  Q
    |||||||    
T  41319881 gtacaat 41319875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 35005202 - 35005247
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  35005202 ctgcatacaatacaccaaaaatggtgggaccccttcccggaccctg 35005247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 218
Target Start/End: Original strand, 8197026 - 8197130
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||||| ||||||||| |||||||| ||||||| |||||||||||||||||||  |||||| ||   |||||| | |||||| |  |||||||||||    
T  8197026 taaccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggtaaggctac 8197125  T
Q  214 gtaca 218  Q
    |||||    
T  8197126 gtaca 8197130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 10668203 - 10668283
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatc-----atgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||     ||||| |||||||||||||||||||  ||||||||||| ||||||    
T  10668203 taaccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 10668283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 25290146 - 25290214
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||  || ||||||||    
T  25290146 taaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaaca 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 45812710 - 45812642
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||| ||||||  ||||| |||||    
T  45812710 taaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 45812642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 304
Target Start/End: Original strand, 4447794 - 4447849
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 304  Q
    ||||||||||||||||| ||||||||  |||||| |||||||||||||||||||||    
T  4447794 tggcccatttctatagtcgggcctcttaggcccgagccggcccatttgacacctct 4447849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 27201630 - 27201705
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||| ||| || ||||||||||||| ||||||| ||||||||||| |||||||  ||||||||||| ||||||    
T  27201630 taaccttagcgtaaatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctctt 27201705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 45402078 - 45402152
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| |||||| | || ||||| |||||||||  ||||||||||| ||||||    
T  45402078 taaccttggcgcaactggtaaagttgttgtcatgt-gatggaaggtaacgggttcaagtcctggaaacagcctctt 45402152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 2435958 - 2435889
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 188  Q
    |||||||||||| |||||||||||| ||| ||| |||||||||||||||||||  ||||||||||| ||||    
T  2435958 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 2435889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 2436064 - 2435995
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 188  Q
    |||||| ||||| |||||||||||| ||| ||| |||||||||||||||||||  ||||||||||||||||    
T  2436064 ccttggtgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctc 2435995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 19932834 - 19932789
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  19932834 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctg 19932789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 25468421 - 25468332
Alignment:
Q  132 gtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 220  Q
    ||||||||||| |||||||  |||||||||| |||||||  |||||||||||||||||| | |||||| | |||||||| | ||||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaat 25468332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 27474264 - 27474332
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    ||||||| || ||||||||||||||||| ||||||| |||||||||||| ||||||  || ||||||||    
T  27474264 taaccttagctcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaaca 27474332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 19414422 - 19414477
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    ||||||||||| || ||||||||||||| |||| || |||||||||||||||||||    
T  19414422 taaccttggcgtaattggtaaagttgttgtcatatgactgaaaggtcacgggttca 19414477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 33222971 - 33223042
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||| || |  || |||||||| ||||||    
T  33222971 cttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctctt 33223042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 6925096 - 6925158
Alignment:
Q  128 actggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||| | ||||||    
T  6925096 actggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctctt 6925158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 6983980 - 6983911
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 188  Q
    ||||||||||| ||||||||||||| ||| ||| |||||||||||| ||||||  ||||||||||| ||||    
T  6983980 ccttggcgcaa-tggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctc 6983911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 12127015 - 12126957
Alignment:
Q  110 agagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggtt 168  Q
    |||| |||||||||||||||| ||||||||||| ||||||   ||||||||||||||||    
T  12127015 agagttaaccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtt 12126957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 27201726 - 27201768
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggacc 345  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  27201726 ctgcgtacaatacaccaaaaatggtgggaccccttcccggacc 27201768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 50606487 - 50606525
Alignment:
Q  310 caatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  50606487 caatacaccaaaaatggtgggaccccttcccggaccctg 50606525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 4430197 - 4430148
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggtt 168  Q
    ||||||||| |||||||||||||| ||||||| ||| |||||||||||||    
T  4430197 cttggcgcagctggtaaagttgttgtcatgtgactggaaggtcacgggtt 4430148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 18742038 - 18741993
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||||    
T  18742038 ctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctg 18741993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 18944722 - 18944767
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||    
T  18944722 ctgcgtacaatacaccaacaatggtgggaccccttcccggaccctg 18944767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 304
Target Start/End: Complemental strand, 48814166 - 48814129
Alignment:
Q  267 gggcctctcgggcccgggccggcccatttgacacctct 304  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  48814166 gggcctcgcgggcccgggccggcccatttgacacctct 48814129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 50811926 - 50811990
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||||| |||||||||||| ||| ||| ||||||||||||||  |||| |||||||||||    
T  50811926 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaaca 50811990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 35117842 - 35117802
Alignment:
Q  308 tacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  35117842 tacaatacaccaaaaatgatgggaccccttcccggaccctg 35117802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 42304283 - 42304243
Alignment:
Q  308 tacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  42304283 tacaatacacaaaaaatggtgggaccccttcccggaccctg 42304243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 52910204 - 52910275
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||| ||||| |||||||||||| ||||||| |||||||||||| ||||||  || |||||||| ||||||    
T  52910204 ccttggtgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagcctctt 52910275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 11596501 - 11596571
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||| |||||||| | | ||||||| |||||| ||||||||||||  |||| |||||||||||||    
T  11596501 cttggcgcaac-ggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctctt 11596571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 17470517 - 17470415
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgta 216  Q
    |||||| ||||| |||||||||||| ||| ||| ||||| ||||| |||||||  |||| |||||| |||||| | |||||| | |||||||||| ||||    
T  17470517 ccttggtgcaac-ggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 17470419  T
Q  217 caat 220  Q
    ||||    
T  17470418 caat 17470415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 30395807 - 30395764
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccc 346  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||    
T  30395807 ctgcgtacaatacaccaataatggtgggaccccttcccggaccc 30395764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 35117927 - 35117868
Alignment:
Q  131 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||| ||| ||| |||||||||||||||||||  ||||||||| | ||||||    
T  35117927 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctctt 35117868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 15511322 - 15511278
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac 163  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||    
T  15511322 ccttggcgcaa-tggtaaagttgttgtaatgtggctgaaaggtcac 15511278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 304
Target Start/End: Complemental strand, 20270630 - 20270593
Alignment:
Q  267 gggcctctcgggcccgggccggcccatttgacacctct 304  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  20270630 gggcctctcgggctcgggccagcccatttgacacctct 20270593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 35019217 - 35019297
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 198  Q
    |||||||||||| |||||||||||| |||  || |||||||||||| | ||||  ||||| |||||||||||| ||||||||    
T  35019217 ccttggcgcaac-ggtaaagttgttgtcacatgactgaaaggtcacagattcaagtcctgtaaacaacctcttgtataaaaa 35019297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 44485280 - 44485213
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcata-tcctggaaacaacc 186  Q
    |||||||||||| | |||||||||| |||||||  |||||||||||||||| ||| ||||||||||||||    
T  44485280 ccttggcgcaacag-taaagttgttgtcatgtgattgaaaggtcacgggtt-atagtcctggaaacaacc 44485213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 5153726 - 5153667
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 304  Q
    ||||||||||| ||||| |||||||||||||     |||||||||||||||||||||||||    
T  5153726 tggcccatttc-atagtcgggcctctcgggcttgggccgggccggcccatttgacacctct 5153667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 10668309 - 10668349
Alignment:
Q  308 tacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    ||||||||||||| ||| ||||||||||||||||| |||||    
T  10668309 tacaatacaccaataatggtgggaccccttcccggtccctg 10668349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 18335463 - 18335395
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||||||| || ||||||| || ||||||| ||||||||||||  ||| |  |||||||||||    
T  18335463 taaccttggcgcaagtgataaagtttttgtcatgtgtctgaaaggtcacaagttaaagtcctggaaaca 18335395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 25554893 - 25554822
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||| ||||||||||||| ||| ||| || ||||| |||| ||| |  ||||||||||||||||||    
T  25554893 ccttggcgcaa-tggtaaagttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaacaacctctt 25554822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 50760397 - 50760326
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||  |||||||| ||| ||||||| |||| ||||||||||||||  ||||| ||||| ||||||    
T  50760397 ccttggcgcaaa-ggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctctt 50760326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 12222088 - 12221986
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtac 217  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||  || |||||||| |||||| | |||||| | |||||||||| |||||    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 12221989  T
Q  218 aat 220  Q
    |||    
T  12221988 aat 12221986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 1346924 - 1346992
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||||    
T  1346924 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 1346992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 1354930 - 1354855
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  1354930 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctctt 1354855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 8409203 - 8409309
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    |||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||  ||||||||||  |||||| | |||||| | |||||||||| |    
T  8409203 taaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgc 8409302  T
Q  214 gtacaat 220  Q
    |||||||    
T  8409303 gtacaat 8409309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 3815252 - 3815184
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||||||||    
T  3815252 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaaca 3815184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 14975263 - 14975180
Alignment:
Q  107 atgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||| ||| |||||||||| ||||  ||||||||||| ||||||    
T  14975263 atgagggataaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctctt 14975180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 24734587 - 24734668
Alignment:
Q  109 gagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||| |||| ||||||||||||||||||||||| ||||||| |||||||||||   ||||| ||||| |||||||||||||    
T  24734587 gagaggtaacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctctt 24734668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 2166579 - 2166512
Alignment:
Q  123 gcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||| ||||||||||| | ||||| |||||||||||||||||||  ||||||||||||||||||    
T  2166579 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 2166512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 2178212 - 2178145
Alignment:
Q  123 gcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||| ||||||||||| | ||||| |||||||||||||||||||  ||||||||||||||||||    
T  2178212 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 2178145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 29356033 - 29355926
Alignment:
Q  115 taaccttggcgcaactggtaaag-ttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggcta 212  Q
    |||||||||| |||||||||||  ||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | ||| || | ||||||||||     
T  29356033 taaccttggcacaactggtaaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctg 29355934  T
Q  213 cgtacaat 220  Q
    ||||||||    
T  29355933 cgtacaat 29355926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 13905152 - 13905047
Alignment:
Q  116 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacg 214  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||||||| |||  ||||| |||| ||||||| | |||||| | |||||||||| |     
T  13905152 aaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaaggctgca 13905054  T
Q  215 tacaatt 221  Q
    |||||||    
T  13905053 tacaatt 13905047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 12063427 - 12063511
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 198  Q
    ||||||||| ||||||| |||||||||||||||| | |||||||||||||||||||  |||| |||| | |||||| ||||||||    
T  12063427 taaccttggtgcaactgataaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttgtataaaaa 12063511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 9161083 - 9161158
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||| |||||  |||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  9161083 taaccttgacgcaatcggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctt 9161158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 15866212 - 15866137
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||| |||||||||||||||||  ||||||  |||||||||| |||||||  ||||||||||| ||||||    
T  15866212 taaccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctctt 15866137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 20400621 - 20400731
Alignment:
Q  109 gagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaa 207  Q
    ||||| |||||||||||||| ||||| ||||||| ||||||| |||||||||||| ||||||  |  ||||||||| ||||| | |||||| | ||||||    
T  20400621 gagaggtaaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaa 20400720  T
Q  208 ggctacgtaca 218  Q
    | || ||||||    
T  20400721 gactgcgtaca 20400731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 1941815 - 1941921
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||||| |||||||||||||||||| |||| || ||| |||||| ||| || |  || || |||||||||||| | |||||| | |||||||||| |    
T  1941815 taaccttggtgcaactggtaaagttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaaacagggtaaggctgc 1941914  T
Q  214 gtacaat 220  Q
    |||||||    
T  1941915 gtacaat 1941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 6024202 - 6024268
Alignment:
Q  124 cgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||||||| |||||||  || |||||||||| |||| ||||| |||||| ||||||    
T  6024202 cgcaactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctctt 6024268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 12221996 - 12221951
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||    
T  12221996 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctg 12221951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 29355936 - 29355891
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||    
T  29355936 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctg 29355891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 12885964 - 12886012
Alignment:
Q  300 cctctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    ||||||| |||||||||| |||||| ||||||||||||||| |||||||    
T  12885964 cctctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctg 12886012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 2166486 - 2166447
Alignment:
Q  308 tacaatacaccaaaaatagtgggaccccttcccggaccct 347  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  2166486 tacaatacaccaataatggtgggaccccttcccggaccct 2166447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 2178119 - 2178080
Alignment:
Q  308 tacaatacaccaaaaatagtgggaccccttcccggaccct 347  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  2178119 tacaatacaccaataatggtgggaccccttcccggaccct 2178080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 2979117 - 2979156
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggcccgggccgg 288  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  2979117 tggcccatttctatagtcgggcctctcgggctcgggccgg 2979156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 7947543 - 7947441
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacct-ctttataaaaagcggggtaaggctacgta 216  Q
    |||||||||||| |||||||||| | |   ||| |||||||||||| ||||||  ||||||||||||||| || | |||||| | |||||||||| ||||    
T  7947543 ccttggcgcaac-ggtaaagttggtgttgcgtgactgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaaggctgcgta 7947445  T
Q  217 caat 220  Q
    ||||    
T  7947444 caat 7947441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 21038362 - 21038323
Alignment:
Q  249 tggcccatttctatagttgggcctctcgggcccgggccgg 288  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  21038362 tggcccatttctatagtcgggcctctcgggcccgagccgg 21038323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 33923003 - 33922948
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    ||||||||||||||| |||||||||||| |||| || |||||| ||||| ||||||    
T  33923003 taaccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttca 33922948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 8417442 - 8417500
Alignment:
Q  125 gcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||||||||||| ||||||| |||||| |||||| |||||  || ||||||||    
T  8417442 gcaactggtaaagttgttgtcatgtgactgaaatgtcacgagttcaggtcatggaaaca 8417500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 19649338 - 19649292
Alignment:
Q  119 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgg 165  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||    
T  19649338 cttggcgcaactgataaagttgttgtcatgtgactgaaagatcacgg 19649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 2978549 - 2978586
Alignment:
Q  219 attagagctgtcaaaaatgagccggtccattggcccat 256  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  2978549 attagagctgtcaaaaatgggccggtccattgtcccat 2978586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 14553477 - 14553537
Alignment:
Q  120 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaa 181  Q
    |||| |||||||||||||||||| ||||||| || ||||||||| ||||||  |||||||||    
T  14553477 ttggtgcaactggtaaagttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaa 14553537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 345
Target Start/End: Complemental strand, 3116204 - 3116168
Alignment:
Q  309 acaatacaccaaaaatagtgggaccccttcccggacc 345  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  3116204 acaatacaccaaaaatggtgggaccccttctcggacc 3116168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 16895778 - 16895734
Alignment:
Q  304 tgcatacaatacaccaaaaatagtggga-ccccttcccggaccct 347  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||    
T  16895778 tgcatacaatacactaaaaatggtgggacccccttcccggaccct 16895734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 23930307 - 23930247
Alignment:
Q  109 gagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttc 169  Q
    ||||| ||||||||||||||||  ||||| |||| ||||||| || |||||||||| ||||    
T  23930307 gagaggtaaccttggcgcaactcataaagatgttgtcatgtgtctcaaaggtcacgagttc 23930247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 52; Significance: 9e-21; HSPs: 6)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 10223 - 10148
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  10223 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 10148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 20551 - 20476
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  20551 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 20476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 8905 - 8960
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||| ||||| ||||||    
T  8905 taaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttca 8960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 19233 - 19288
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||| ||||| ||||||    
T  19233 taaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttca 19288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 10129 - 10086
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||    
T  10129 ctgcgtacaatacaccaaa--tagtgggaccccttcccggaccctg 10086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 20457 - 20414
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttcccggaccctg 348  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||    
T  20457 ctgcgtacaatacaccaaa--tagtgggaccccttcccggaccctg 20414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 30539 - 30614
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  30539 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctctt 30614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 58937 - 59043
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 213  Q
    ||||||||| |||||||||||| || || ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||||| | ||||||| || |    
T  58937 taaccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgc 59036  T
Q  214 gtacaat 220  Q
    |||||||    
T  59037 gtacaat 59043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 59033 - 59070
Alignment:
Q  303 ctgcatacaatacaccaaaaatagtgggaccccttccc 340  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  59033 ctgcgtacaatacaccaaaaatggtgggaccccttccc 59070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 13198 - 13123
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  13198 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctctt 13123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 226581 - 226506
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||  |||| |||||| ||||||    
T  226581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctctt 226506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 11093 - 11166
Alignment:
Q  116 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||||||||||||  ||||||||||| ||||||    
T  11093 aaccttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 11166  T

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Target: scaffold0024 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 83826 - 83904
Alignment:
Q  106 catgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaa 184  Q
    |||||| | |||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||  || |||||||||    
T  83826 catgaggggtaaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaa 83904  T

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Target: scaffold0254 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 4125 - 4192
Alignment:
Q  123 gcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||| ||||||||||| | ||||| |||||||||||||||||||  ||||||||||||||||||    
T  4125 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 4192  T

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Target: scaffold0057 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 24942 - 24887
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  24942 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttca 24887  T

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Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 46794 - 46866
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||| ||||||||||||| ||||||| ||  |||||||||||||||  | ||||||||||||||||    
T  46794 ccttggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctctt 46866  T

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Target: scaffold1176 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 1758 - 1685
Alignment:
Q  117 accttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||| ||||| ||||||||||||| ||||||| ||||||||||| |||||||  ||||| ||||||||||||    
T  1758 accttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctctt 1685  T

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Target: scaffold0311 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 10773 - 10825
Alignment:
Q  118 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 170  Q
    |||||| |||||||||||||||||| ||||||| ||| |||||||||||||||    
T  10773 ccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttca 10825  T

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Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 8865 - 8926
Alignment:
Q  129 ctggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    |||||||||||||| ||||||| ||| |||||||| ||||||  ||||||||||||| ||||    
T  8865 ctggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttctt 8926  T

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Target: scaffold0194 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 24624 - 24692
Alignment:
Q  115 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 183  Q
    |||||||||| ||| || |||||||||| ||| ||| ||| |||||||||||||||  |||||||||||    
T  24624 taaccttggcacaattgataaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaaca 24692  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 43097 - 43164
Alignment:
Q  123 gcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 190  Q
    ||||||||||||||||| || |||||||  |||||||||||| |||||  |||| |||||| ||||||    
T  43097 gcgcaactggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctctt 43164  T

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Target: scaffold0242 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 4232 - 4289
Alignment:
Q  252 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 304  Q
    |||||||||||||| |||| ||||||||||     |||||||||||||||||||||||    
T  4232 cccatttctatagtcgggcttctcgggcccgggctgggccggcccatttgacacctct 4289  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 73034 - 73001
Alignment:
Q  117 accttggcgcaactggtaaagttgttatcatgtg 150  Q
    |||||||||||||||||||||||||| |||||||    
T  73034 accttggcgcaactggtaaagttgttgtcatgtg 73001  T

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