View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14353_high_48 (Length: 317)
Name: NF14353_high_48
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14353_high_48 |
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Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 12 - 296
Target Start/End: Complemental strand, 8443761 - 8443476
Alignment:
| Q |
12 |
aattcttaatgctttaaatttatcatatgatgttactatcttattctggccaaacaactaaatttgtccaataagcaaaactgtctccctt-gttaggat |
110 |
Q |
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| T |
8443761 |
aattctttatgctttaaatttatcatatgatgttactatcttattctggccaaacaactaaatttgtccaataagctaaactgtctccctttgttaggat |
8443662 |
T |
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| Q |
111 |
aacatatttttcaaaataaatgatttaaacaggttcataactatcacgttaattatattatagtcttaatggtagaataattatatcgaattatatgcgc |
210 |
Q |
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| T |
8443661 |
aacatatttttcaaaataaatgatttaaacaggttcataactatcacgttaattatattatagtcttaatggtaggataattatatcgaattatatgcgc |
8443562 |
T |
|
| Q |
211 |
aataccttatgaaaaggtcttcttttttctaagccaatatcgtatccattttatttaaggtaccattacggtctttctaatcattt |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8443561 |
aataccttatgaaaaggtcttcttttttctaagccaatatcgtatccattttatttaaggtaccattacggtctttctaatcattt |
8443476 |
T |
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