View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14353_high_53 (Length: 299)
Name: NF14353_high_53
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14353_high_53 |
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Alignment Details
Target: chr2 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 8 - 284
Target Start/End: Complemental strand, 12701015 - 12700739
Alignment:
| Q |
8 |
caccacagatattccaagagaacattgtcgaaatactgtaccagaaacattaatattttcagaaaataacagttgctaaatgagtttaaaatacttgcaa |
107 |
Q |
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|||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12701015 |
caccacagttattacaagagaacattgtcgaaatactgtaccagaaacattaatattttcagaaaataacagttgctaaatgagtttaaaatacttgcaa |
12700916 |
T |
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| Q |
108 |
ctagaaataaatgtacaaaagttatctaatgtagtcaccgacataccatgcctcagttacacgagaacattgtgctgcgatacgcatgtgctgaaaacca |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
12700915 |
ctagaaataaatgtacaaaagttatctaatgtagtcaccgacataccatgcctcagttacacgagaacattgtgctgcgatacgcatgcgctgaaaacca |
12700816 |
T |
|
| Q |
208 |
taacggaagtgttgagctatacttcacagaatacatttctttccaaacttgactcctgcgttgatacaccaaaacct |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12700815 |
taacggaagtgttgagctatacttcacagaatacatttctttccaaacttgactcctgcgttgatacaccaaaacct |
12700739 |
T |
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